Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	882	254.4	12957588	98.0%	12698436	93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑CG‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACTG  >  NC_000913/4013083‑4013262

GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑G                                                                                         <  SRR4302537.3555760/94‑1 (MQ=60)

GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑G                                                                                         <  SRR4302537.1298908/94‑1 (MQ=60)

 CTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GG                                                                                        >  SRR4302537.1164693/1‑94 (MQ=60)

 CTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GG                                                                                        <  SRR4302537.1844954/94‑1 (MQ=60)

 CTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GG                                                                                        >  SRR4302537.3830350/1‑94 (MQ=60)

        ATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTA                                                                                 >  SRR4302537.938571/1‑94 (MQ=60)

        ATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTA                                                                                 >  SRR4302537.3311805/1‑94 (MQ=60)

         TTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAA                                                                                >  SRR4302537.5287778/1‑94 (MQ=60)

           AGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGA                                                                              >  SRR4302537.4981433/1‑94 (MQ=60)

           AGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGA                                                                              >  SRR4302537.477169/1‑94 (MQ=60)

           AGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGA                                                                              >  SRR4302537.332761/1‑94 (MQ=60)

           AGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGA                                                                              <  SRR4302537.2254024/94‑1 (MQ=60)

              AGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCG                                                                           <  SRR4302537.5189675/94‑1 (MQ=60)

                CCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGT                                                                         >  SRR4302537.187714/1‑94 (MQ=60)

                CCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGT                                                                         <  SRR4302537.2312543/94‑1 (MQ=60)

                  CGCAGCGCCTGTCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTG                                                                       <  SRR4302537.1362123/94‑1 (MQ=60)

                  CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑TGCGCGTTAAGATCGGTTG                                                                       >  SRR4302537.143679/1‑94 (MQ=60)

                  CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTG                                                                       <  SRR4302537.2132854/94‑1 (MQ=60)

                  CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTG                                                                       <  SRR4302537.5768079/94‑1 (MQ=60)

                  CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTG                                                                       <  SRR4302537.1688755/94‑1 (MQ=60)

                  CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTG                                                                       <  SRR4302537.6178136/94‑1 (MQ=60)

                  CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTG                                                                       <  SRR4302537.658766/94‑1 (MQ=60)

                  CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTG                                                                       >  SRR4302537.375622/1‑94 (MQ=60)

                  CGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATC‑GGCGCGTTAAGATCGGTTG                                                                       >  SRR4302537.757670/1‑94 (MQ=60)

                     AGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGA                                                                    >  SRR4302537.3459011/1‑94 (MQ=60)

                     AGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGA                                                                    >  SRR4302537.2943940/1‑94 (MQ=60)

                     AGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATC‑GGCGCGTTAAGATCGGTTGCGA                                                                    >  SRR4302537.3230299/1‑94 (MQ=60)

                      GCGCCTGGCGCATCGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGAT                                                                   <  SRR4302537.751077/94‑1 (MQ=60)

                       CGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATA                                                                  <  SRR4302537.4977581/94‑1 (MQ=60)

                        GCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATAT                                                                 <  SRR4302537.126470/94‑1 (MQ=60)

                         CCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATC                                                                <  SRR4302537.6081023/94‑1 (MQ=60)

                         CCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATC                                                                <  SRR4302537.3486388/94‑1 (MQ=60)

                          CTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCA                                                               >  SRR4302537.836658/1‑94 (MQ=60)

                          CTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCA                                                               >  SRR4302537.2769095/1‑94 (MQ=60)

                          CTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCA                                                               >  SRR4302537.3956326/1‑94 (MQ=60)

                           TGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAA                                                              <  SRR4302537.265003/94‑1 (MQ=60)

                            GGCGCATGGTTTCAACGCTCGCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAAC                                                             <  SRR4302537.4668141/94‑1 (MQ=60)

                             GCGCATGGTTGCAACGCTCTCCTGCGAAATCCTGTTATCCTGACCACCATCTAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACA                                                            <  SRR4302537.4576700/94‑1 (MQ=60)

                              CGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAG                                                           <  SRR4302537.1359663/94‑1 (MQ=60)

                               GCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGG                                                          >  SRR4302537.1690118/1‑94 (MQ=60)

                                GATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGT                                                         <  SRR4302537.3091067/94‑1 (MQ=60)

                                CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGT                                                         <  SRR4302537.597818/94‑1 (MQ=60)

                                CATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGT                                                         >  SRR4302537.6136667/1‑94 (MQ=60)

                                 ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTT                                                        <  SRR4302537.5789709/94‑1 (MQ=60)

                                 ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTT                                                        >  SRR4302537.3865926/1‑94 (MQ=60)

                                 ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTT                                                        <  SRR4302537.3731003/94‑1 (MQ=60)

                                 ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTT                                                        >  SRR4302537.1869155/1‑94 (MQ=60)

                                 ATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAATAGAGAATC‑GGCGCGATAAGATAGGTTGCGATATCAACATGTT                                                        >  SRR4302537.4119077/1‑94 (MQ=60)

                                  TGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTG                                                       >  SRR4302537.3139721/1‑94 (MQ=60)

                                      TTCAGCGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATACGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTC                                                   <  SRR4302537.4720693/94‑1 (MQ=60)

                                        CAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGG                                                 <  SRR4302537.5397704/94‑1 (MQ=60)

                                         AACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGT                                                >  SRR4302537.5742815/1‑94 (MQ=60)

                                          ACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTG                                               <  SRR4302537.2502638/94‑1 (MQ=60)

                                           CGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGA                                              <  SRR4302537.3580894/94‑1 (MQ=60)

                                           CGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGA                                              >  SRR4302537.1961010/1‑94 (MQ=60)

                                             CTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAT                                            >  SRR4302537.6377897/1‑94 (MQ=60)

                                             CTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAAT                                            >  SRR4302537.6113929/1‑94 (MQ=60)

                                               CTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTC                                          >  SRR4302537.5940746/1‑94 (MQ=60)

                                               CTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTC                                          <  SRR4302537.2145815/94‑1 (MQ=60)

                                               CTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTC                                          <  SRR4302537.470998/94‑1 (MQ=60)

                                               CTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTC                                          <  SRR4302537.5316275/94‑1 (MQ=60)

                                                TCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCA                                         <  SRR4302537.2753963/94‑1 (MQ=60)

                                                TCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCA                                         <  SRR4302537.1922978/94‑1 (MQ=60)

                                                TCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCA                                         <  SRR4302537.932733/94‑1 (MQ=60)

                                                 CCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAG                                        >  SRR4302537.3487782/1‑94 (MQ=60)

                                                 CCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAG                                        <  SRR4302537.142613/94‑1 (MQ=60)

                                                 CCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAG                                        <  SRR4302537.3601833/94‑1 (MQ=60)

                                                  CTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGC                                       >  SRR4302537.464100/1‑94 (MQ=60)

                                                  CTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGC                                       >  SRR4302537.4018714/1‑94 (MQ=60)

                                                  CTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAAGC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGC                                       <  SRR4302537.5190029/94‑1 (MQ=60)

                                                  CTGCGGAATGCTGTTATCCTGACCACCATATAAGACGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGGTTAGGTGAATTCAGG                                       >  SRR4302537.3036666/1‑94 (MQ=60)

                                                   TGCGGAATGCTTTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCG                                      <  SRR4302537.4634662/94‑1 (MQ=60)

                                                   TGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCG                                      <  SRR4302537.3862661/94‑1 (MQ=60)

                                                   TGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCG                                      >  SRR4302537.2944219/1‑94 (MQ=60)

                                                     CGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGAC                                    >  SRR4302537.198307/1‑94 (MQ=60)

                                                      GGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACT                                   >  SRR4302537.1838254/1‑94 (MQ=60)

                                                       GAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTT                                  >  SRR4302537.4309576/1‑94 (MQ=60)

                                                       GAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTT                                  <  SRR4302537.4371072/94‑1 (MQ=60)

                                                         ATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGT                                >  SRR4302537.4623927/1‑94 (MQ=60)

                                                          TGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTC                               >  SRR4302537.1075103/1‑94 (MQ=60)

                                                          TGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTC                               >  SRR4302537.2121544/1‑94 (MQ=60)

                                                            CTGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGC                             >  SRR4302537.3301833/1‑94 (MQ=60)

                                                             TGTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCC                            >  SRR4302537.2392819/1‑94 (MQ=60)

                                                              GTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCC                           >  SRR4302537.1002251/1‑94 (MQ=60)

                                                              GTTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCC                           >  SRR4302537.1553428/1‑94 (MQ=60)

                                                               TTATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCG                          <  SRR4302537.2972109/94‑1 (MQ=60)

                                                                TATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGT                         >  SRR4302537.2196440/1‑94 (MQ=60)

                                                                 ATCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTC                        <  SRR4302537.495394/94‑1 (MQ=60)

                                                                  TCCTGACCACCATATACGCCGAGACTCGCC‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCA                       <  SRR4302537.2381389/94‑1 (MQ=60)

                                                                  TCCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGAGCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCA                       <  SRR4302537.1554380/94‑1 (MQ=60)

                                                                  CCCTGCCCACCATATAAGCAGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCA                       <  SRR4302537.3657813/94‑1 (MQ=60)

                                                                   CCTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAG                      >  SRR4302537.2035667/1‑94 (MQ=60)

                                                                    CTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGT                     <  SRR4302537.3572672/94‑1 (MQ=60)

                                                                    CTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGT                     <  SRR4302537.2259472/94‑1 (MQ=60)

                                                                    CTGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGT                     >  SRR4302537.4287811/1‑94 (MQ=60)

                                                                     TGACCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTT                    >  SRR4302537.1240388/1‑94 (MQ=60)

                                                                        CCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCCGTTTGC                 >  SRR4302537.3868407/1‑94 (MQ=60)

                                                                        CCACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGC                 >  SRR4302537.4478823/1‑94 (MQ=60)

                                                                          ACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCG               >  SRR4302537.4555138/1‑94 (MQ=60)

                                                                          ACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCG               >  SRR4302537.1779266/1‑94 (MQ=60)

                                                                          ACCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCG               >  SRR4302537.4421368/1‑94 (MQ=60)

                                                                           CCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGT              >  SRR4302537.1579328/1‑94 (MQ=60)

                                                                           CCATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGT              >  SRR4302537.1543563/1‑94 (MQ=60)

                                                                            CATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTA             <  SRR4302537.1454477/94‑1 (MQ=60)

                                                                             ATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAC            >  SRR4302537.3530326/1‑94 (MQ=60)

                                                                             ATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAC            >  SRR4302537.5537479/1‑94 (MQ=60)

                                                                             ATATAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTAC            <  SRR4302537.4628846/94‑1 (MQ=60)

                                                                                TAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCAC         <  SRR4302537.3836576/94‑1 (MQ=60)

                                                                                TAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCAC         <  SRR4302537.3934815/94‑1 (MQ=60)

                                                                                TAAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCAC         <  SRR4302537.1383900/94‑1 (MQ=60)

                                                                                 AAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACG        <  SRR4302537.2628924/94‑1 (MQ=60)

                                                                                 AAGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACG        >  SRR4302537.4309187/1‑94 (MQ=60)

                                                                                  AGCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCTGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGC       <  SRR4302537.3482406/94‑1 (MQ=60)

                                                                                   GCCGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCC      >  SRR4302537.2411079/1‑94 (MQ=60)

                                                                                     CGAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCAC    >  SRR4302537.1492729/1‑94 (MQ=60)

                                                                                      GAGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACT   <  SRR4302537.4811192/94‑1 (MQ=60)

                                                                                       AGAATC‑GGCGCGTTAAGATCGGTTGCGATATCAGCAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACTG  <  SRR4302537.2901501/94‑1 (MQ=60)

GCTTTCGCATTAGCAGCCCGCAGCGCCTGGCGCATGGTTTCAACGCTCTCCTGCGGAATGCTGTTATCCTGACCACCATATAAGCCGAGAATC‑CG‑GCGTTAAGATCGGTTGCGATATCAACAGGTTGTTTCGGTGAATTCAGCGACTTGTCGCCCGTCAGTTTGCCGTACCACGCCACTG  >  NC_000913/4013083‑4013262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`