Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,744,399 T→C intergenic (‑194/+55) rpsP ← / ← ffh 30S ribosomal subunit protein S16/FFh

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,744,3990TC84.3% 620.7 / 107.1 281intergenic (‑194/+55)rpsP/ffh30S ribosomal subunit protein S16/FFh
Reads supporting (aligned to +/- strand):  ref base T (20/24);  new base C (123/114);  total (143/138)
Fisher's exact test for biased strand distribution p-value = 5.12e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.74e-02

Only 100 of 283 total aligned reads displayed.

AATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCCT  >  NC_000913/2744307‑2744488
                                                                                            |                                                                                         
   cAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACg                                                                                        <  2:1006936/93‑1 (MQ=255)
     aCAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTg                                                                                      >  1:7292033/1‑93 (MQ=255)
      cAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGa                                                                                     >  1:4471414/1‑93 (MQ=255)
       aGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAg                                                                                    >  2:282296/1‑93 (MQ=255)
       aGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAg                                                                                    >  2:2479022/1‑93 (MQ=255)
        gTTGCTAACTCTGCCGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAgg                                                                                   >  2:3831273/1‑93 (MQ=255)
         ttGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGa                                                                                  <  2:816650/93‑1 (MQ=255)
          tGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGAt                                                                                 <  1:4984738/93‑1 (MQ=255)
          tGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGAt                                                                                 >  2:210233/1‑93 (MQ=255)
           gCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATg                                                                                >  2:3782718/1‑93 (MQ=255)
             tAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGAc                                                                              <  2:2271326/93‑1 (MQ=255)
             tAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGAc                                                                              >  2:5952022/1‑93 (MQ=255)
              aaCTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACg                                                                             <  1:4305211/93‑1 (MQ=255)
               aCTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGa                                                                            >  1:6056351/1‑93 (MQ=255)
               aCTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGa                                                                            >  2:6380672/1‑93 (MQ=255)
                ctctGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAg                                                                           >  1:877705/1‑93 (MQ=255)
                 tctGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGc                                                                          >  2:3438495/1‑93 (MQ=255)
                 tctGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGc                                                                          >  2:1122682/1‑93 (MQ=255)
                 tctGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGc                                                                          >  1:3205279/1‑93 (MQ=255)
                   tgctgTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGcac                                                                        <  1:1255420/93‑1 (MQ=255)
                    gctgTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGcaca                                                                       <  1:1139168/93‑1 (MQ=255)
                    gctgTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGcaca                                                                       >  2:5782583/1‑93 (MQ=255)
                      tgTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATc                                                                     >  1:3527121/1‑93 (MQ=255)
                      tgTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATc                                                                     <  2:3607926/93‑1 (MQ=255)
                      tgTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATc                                                                     <  1:5933764/93‑1 (MQ=255)
                       gTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATcc                                                                    <  1:24120/93‑1 (MQ=255)
                       gTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATcc                                                                    <  1:6359682/93‑1 (MQ=255)
                       gTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATcc                                                                    >  1:2936857/1‑93 (MQ=255)
                       gTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATcc                                                                    >  2:5490022/1‑93 (MQ=255)
                        tAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATccc                                                                   >  1:4567651/1‑93 (MQ=255)
                        tAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATccc                                                                   <  2:87678/93‑1 (MQ=255)
                        tAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATccc                                                                   >  1:5367226/1‑93 (MQ=255)
                        tAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATccc                                                                   >  2:5571015/1‑93 (MQ=255)
                         aaaaGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCg                                                                  >  1:4120483/1‑93 (MQ=255)
                          aaaGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCgg                                                                 >  1:4514001/1‑93 (MQ=255)
                          aaaGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCgg                                                                 >  1:3327245/1‑93 (MQ=255)
                             ggCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGc                                                              <  2:6117708/93‑1 (MQ=255)
                             ggCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGc                                                              >  1:6903377/1‑93 (MQ=255)
                              gCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGcc                                                             >  1:748766/1‑93 (MQ=255)
                               ccGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCa                                                            >  1:3094961/1‑93 (MQ=255)
                                  tCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCaaaa                                                         <  2:3867024/93‑1 (MQ=255)
                                  tCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCaaaa                                                         >  1:3058513/1‑93 (MQ=255)
                                    ggcggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATg                                                       <  1:576039/93‑1 (MQ=255)
                                    ggcggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATg                                                       >  1:623446/1‑93 (MQ=255)
                                     gcggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATgg                                                      >  2:4116627/1‑93 (MQ=255)
                                       ggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCa                                                    >  1:5446113/1‑93 (MQ=255)
                                       ggTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCa                                                    <  2:7317400/93‑1 (MQ=255)
                                        gTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCaa                                                   <  2:4424603/93‑1 (MQ=255)
                                          gCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAAc                                                 >  1:6791819/1‑93 (MQ=255)
                                            aGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACaa                                               <  1:4815953/93‑1 (MQ=255)
                                            aGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACaa                                               >  2:6415958/1‑93 (MQ=255)
                                             gCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAg                                              <  2:7193020/93‑1 (MQ=255)
                                             gCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAg                                              >  2:3062018/1‑93 (MQ=255)
                                              ccAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGc                                             <  2:3232724/93‑1 (MQ=255)
                                               cAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGcc                                            >  1:5463865/1‑93 (MQ=255)
                                                aGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCa                                           <  1:6435769/93‑1 (MQ=255)
                                                aGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCa                                           <  1:2518997/93‑1 (MQ=255)
                                                 gTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAg                                          >  1:2249106/1‑93 (MQ=255)
                                                 gTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAg                                          >  2:5106387/1‑93 (MQ=255)
                                                 gTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAg                                          >  1:258049/1‑93 (MQ=255)
                                                 gTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAg                                          <  2:1588657/93‑1 (MQ=255)
                                                    tGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGcc                                       <  2:2158396/93‑1 (MQ=255)
                                                    tGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGcc                                       >  1:1366807/1‑93 (MQ=255)
                                                     ggTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCg                                      <  1:56080/93‑1 (MQ=255)
                                                      gTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGa                                     <  2:2376170/93‑1 (MQ=255)
                                                         ccGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTa                                  <  1:7119138/93‑1 (MQ=255)
                                                         ccGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTa                                  <  1:1914964/93‑1 (MQ=255)
                                                         ccGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTa                                  >  1:1854211/1‑93 (MQ=255)
                                                          cGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAg                                 >  1:6762138/1‑93 (MQ=255)
                                                          cGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAg                                 >  2:1340567/1‑93 (MQ=255)
                                                          cGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAg                                 >  1:388196/1‑93 (MQ=255)
                                                          cGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAg                                 <  1:1489602/93‑1 (MQ=255)
                                                           ggAGTGCGCGCAGTCACCGGAGCGTACACGCAGCTCGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGc                                <  1:3418281/93‑1 (MQ=255)
                                                           ggAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGc                                >  2:471419/1‑93 (MQ=255)
                                                           ggAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGc                                <  1:6999207/93‑1 (MQ=255)
                                                              gTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGAc                             <  2:6625604/93‑1 (MQ=255)
                                                                  gcgcAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAgg                         >  1:2043933/1‑93 (MQ=255)
                                                                  gcgcAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAgg                         <  2:5263701/93‑1 (MQ=255)
                                                                       gTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGc                    <  1:2124618/93‑1 (MQ=255)
                                                                       gTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGc                    >  2:4975074/1‑93 (MQ=255)
                                                                        tCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGcc                   >  1:4958497/1‑93 (MQ=255)
                                                                        tCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGcc                   >  2:7444055/1‑93 (MQ=255)
                                                                        tCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGcc                   >  2:1983254/1‑93 (MQ=255)
                                                                        tCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGcc                   <  1:6640246/93‑1 (MQ=255)
                                                                          aCCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTg                 <  2:5886167/93‑1 (MQ=255)
                                                                          aCCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTg                 >  2:1695539/1‑93 (MQ=255)
                                                                           ccGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTgg                >  2:4580483/1‑93 (MQ=255)
                                                                           ccGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTgg                >  1:2819932/1‑93 (MQ=255)
                                                                            cGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTggg               <  1:3951671/93‑1 (MQ=255)
                                                                             ggAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTgggg              <  1:2475287/93‑1 (MQ=255)
                                                                             ggAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTgggg              >  2:2627760/1‑93 (MQ=255)
                                                                             ggAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTgggg              >  1:4589504/1‑93 (MQ=255)
                                                                             ggAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTgggg              <  2:144509/93‑1 (MQ=255)
                                                                              gAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTggggg             <  2:2880500/93‑1 (MQ=255)
                                                                               aGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGc            >  1:1668330/1‑93 (MQ=255)
                                                                                gCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGca           >  2:4200621/1‑93 (MQ=255)
                                                                                  gTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGcatc         <  2:6949206/93‑1 (MQ=255)
                                                                                     cacGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATa      <  1:1044480/93‑1 (MQ=255)
                                                                                         cAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCCt  <  2:2703581/93‑1 (MQ=255)
                                                                                         cAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCCt  <  2:4012563/93‑1 (MQ=255)
                                                                                            |                                                                                         
AATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCCT  >  NC_000913/2744307‑2744488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CAATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCCTTCAT  >  NC_000913/2744306‑2744492
                                                                                             |                                                                                             
CAATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGT                                                                                               <  SRR4302542.4765334/94‑1 (MQ=60)
CAATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGC                                                                                               >  SRR4302542.2989838/1‑94 (MQ=60)
 AATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCA                                                                                              >  SRR4302542.4230466/1‑94 (MQ=60)
   TCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACG                                                                                            <  SRR4302542.4423617/94‑1 (MQ=60)
   TCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGGGCGCGCAGTCACCGGAGCGTACACGCAGCACG                                                                                            >  SRR4302542.4878157/1‑94 (MQ=60)
    CAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGCACACGCAGCACGT                                                                                           >  SRR4302542.4936641/1‑94 (MQ=60)
     AACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTG                                                                                          >  SRR4302542.7309153/1‑94 (MQ=60)
     AACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTG                                                                                          >  SRR4302542.3459269/1‑94 (MQ=60)
     AACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTG                                                                                          >  SRR4302542.7363508/1‑94 (MQ=60)
      ACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGA                                                                                         >  SRR4302542.4515270/1‑94 (MQ=60)
       CAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAG                                                                                        <  SRR4302542.6223772/94‑1 (MQ=60)
        AGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGG                                                                                       >  SRR4302542.2229862/1‑94 (MQ=60)
        AGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGG                                                                                       <  SRR4302542.5738791/94‑1 (MQ=60)
         GTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGA                                                                                      >  SRR4302542.3116742/1‑94 (MQ=60)
         GTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGA                                                                                      >  SRR4302542.4087771/1‑94 (MQ=60)
          TTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGAT                                                                                     <  SRR4302542.1551196/94‑1 (MQ=60)
           TGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATG                                                                                    <  SRR4302542.5033108/94‑1 (MQ=60)
            GCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGA                                                                                   >  SRR4302542.6114165/1‑94 (MQ=60)
             CTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGAC                                                                                  >  SRR4302542.501511/1‑94 (MQ=60)
             CTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGAC                                                                                  <  SRR4302542.3541728/94‑1 (MQ=60)
             CTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGAC                                                                                  <  SRR4302542.1909958/94‑1 (MQ=60)
               AACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGA                                                                                <  SRR4302542.4347531/94‑1 (MQ=60)
               AACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGA                                                                                >  SRR4302542.6114976/1‑94 (MQ=60)
               AACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGA                                                                                >  SRR4302542.808624/1‑94 (MQ=60)
                ACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAG                                                                               >  SRR4302542.885278/1‑94 (MQ=60)
                 CTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGC                                                                              >  SRR4302542.2099733/1‑94 (MQ=60)
                 CTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGC                                                                              >  SRR4302542.3235643/1‑94 (MQ=60)
                 CTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGC                                                                              >  SRR4302542.6767915/1‑94 (MQ=60)
                  TCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCA                                                                             >  SRR4302542.6292132/1‑94 (MQ=60)
                   CTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCAC                                                                            <  SRR4302542.3386616/94‑1 (MQ=60)
                   CTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCAC                                                                            >  SRR4302542.3074522/1‑94 (MQ=60)
                    TGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACA                                                                           <  SRR4302542.1266218/94‑1 (MQ=60)
                     GCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACAT                                                                          <  SRR4302542.1148924/94‑1 (MQ=60)
                      CTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATC                                                                         >  SRR4302542.3560087/1‑94 (MQ=60)
                       TGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCC                                                                        <  SRR4302542.1245254/94‑1 (MQ=60)
                       TGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCC                                                                        >  SRR4302542.2964986/1‑94 (MQ=60)
                       TGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCC                                                                        >  SRR4302542.4191487/1‑94 (MQ=60)
                       TGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCC                                                                        <  SRR4302542.5991252/94‑1 (MQ=60)
                        GTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCC                                                                       <  SRR4302542.24327/94‑1 (MQ=60)
                        GTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCC                                                                       >  SRR4302542.4612366/1‑94 (MQ=60)
                        GTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCC                                                                       >  SRR4302542.5419387/1‑94 (MQ=60)
                        GTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCC                                                                       >  SRR4302542.7253517/1‑94 (MQ=60)
                        GTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCC                                                                       <  SRR4302542.6422313/94‑1 (MQ=60)
                        GTAAAAGGCCGTCGGCGGTACAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCC                                                                       >  SRR4302542.27724/1‑94 (MQ=60)
                         TAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCG                                                                      >  SRR4302542.4161079/1‑94 (MQ=60)
                          AAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGG                                                                     <  SRR4302542.2601448/94‑1 (MQ=60)
                          AAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGG                                                                     >  SRR4302542.3358568/1‑94 (MQ=60)
                          AAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGG                                                                     >  SRR4302542.4558236/1‑94 (MQ=60)
                           AAAGGGCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGT                                                                    <  SRR4302542.254397/94‑1 (MQ=60)
                           AAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGT                                                                    <  SRR4302542.5249826/94‑1 (MQ=60)
                            AAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTG                                                                   >  SRR4302542.4579659/1‑94 (MQ=60)
                            AAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTG                                                                   >  SRR4302542.3968202/1‑94 (MQ=60)
                            AAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTG                                                                   >  SRR4302542.5620631/1‑94 (MQ=60)
                             AGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGC                                                                  >  SRR4302542.6971151/1‑94 (MQ=60)
                              GGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCC                                                                 >  SRR4302542.755248/1‑94 (MQ=60)
                               GCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCA                                                                >  SRR4302542.3124391/1‑94 (MQ=60)
                                 CGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAA                                                              >  SRR4302542.1678084/1‑94 (MQ=60)
                                  GTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAA                                                             >  SRR4302542.3087683/1‑94 (MQ=60)
                                   TCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAAT                                                            <  SRR4302542.373235/94‑1 (MQ=60)
                                   TCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAAT                                                            <  SRR4302542.5958070/94‑1 (MQ=60)
                                    CGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATG                                                           >  SRR4302542.628811/1‑94 (MQ=60)
                                     GGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGG                                                          <  SRR4302542.580988/94‑1 (MQ=60)
                                      GCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGC                                                         <  SRR4302542.1114410/94‑1 (MQ=60)
                                       CGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCA                                                        >  SRR4302542.5499018/1‑94 (MQ=60)
                                       CGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCA                                                        <  SRR4302542.4036124/94‑1 (MQ=60)
                                       CGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCA                                                        >  SRR4302542.1352689/1‑94 (MQ=60)
                                        GGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAA                                                       <  SRR4302542.5624272/94‑1 (MQ=60)
                                        GGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAA                                                       >  SRR4302542.2543085/1‑94 (MQ=60)
                                        GGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAA                                                       >  SRR4302542.461686/1‑94 (MQ=60)
                                        GGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAA                                                       >  SRR4302542.5420779/1‑94 (MQ=60)
                                          TGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAAC                                                     >  SRR4302542.6858609/1‑94 (MQ=60)
                                           GCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACA                                                    <  SRR4302542.252665/94‑1 (MQ=60)
                                            CAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAA                                                   >  SRR4302542.4664/1‑94 (MQ=60)
                                             AGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAG                                                  >  SRR4302542.6455199/1‑94 (MQ=60)
                                             AGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAG                                                  <  SRR4302542.4862887/94‑1 (MQ=60)
                                              GCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGC                                                 <  SRR4302542.6533078/94‑1 (MQ=60)
                                              GCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGC                                                 >  SRR4302542.2430916/1‑94 (MQ=60)
                                               CCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCC                                                <  SRR4302542.1253380/94‑1 (MQ=60)
                                               CCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCC                                                >  SRR4302542.5516944/1‑94 (MQ=60)
                                                CAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCA                                               >  SRR4302542.4224542/1‑94 (MQ=60)
                                                CAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCA                                               >  SRR4302542.2639576/1‑94 (MQ=60)
                                                 AGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAG                                              >  SRR4302542.2268447/1‑94 (MQ=60)
                                                 AGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAG                                              >  SRR4302542.1748948/1‑94 (MQ=60)
                                                 AGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAG                                              >  SRR4302542.260248/1‑94 (MQ=60)
                                                 AGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAG                                              <  SRR4302542.6499170/94‑1 (MQ=60)
                                                 AGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAG                                              <  SRR4302542.2005713/94‑1 (MQ=60)
                                                 AGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAG                                              <  SRR4302542.4449846/94‑1 (MQ=60)
                                                 AGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAG                                              <  SRR4302542.2543431/94‑1 (MQ=60)
                                                  GTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGG                                             <  SRR4302542.6318882/94‑1 (MQ=60)
                                                  GTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGG                                             <  SRR4302542.2178927/94‑1 (MQ=60)
                                                  GTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGG                                             <  SRR4302542.5799243/94‑1 (MQ=60)
                                                  GTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGG                                             <  SRR4302542.3178683/94‑1 (MQ=60)
                                                  GTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGG                                             <  SRR4302542.6798846/94‑1 (MQ=60)
                                                  GTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGG                                             >  SRR4302542.6695882/1‑94 (MQ=60)
                                                    TTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCC                                           >  SRR4302542.1378621/1‑94 (MQ=60)
                                                      GGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGA                                         <  SRR4302542.56539/94‑1 (MQ=60)
                                                       GTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGAT                                        >  SRR4302542.5457431/1‑94 (MQ=60)
                                                       GTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGAT                                        <  SRR4302542.6104673/94‑1 (MQ=60)
                                                         GCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAGACAAGCCAGGCCGATTA                                      >  SRR4302542.4547890/1‑94 (MQ=60)
                                                         GCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTA                                      <  SRR4302542.87408/94‑1 (MQ=60)
                                                         GCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTA                                      <  SRR4302542.683056/94‑1 (MQ=60)
                                                         GCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTA                                      >  SRR4302542.1870244/1‑94 (MQ=60)
                                                          CCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAG                                     >  SRR4302542.6828653/1‑94 (MQ=60)
                                                          CCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAG                                     <  SRR4302542.7189017/94‑1 (MQ=60)
                                                          CCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAG                                     >  SRR4302542.391562/1‑94 (MQ=60)
                                                          CCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAG                                     <  SRR4302542.1931514/94‑1 (MQ=60)
                                                           CGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGC                                    <  SRR4302542.1502484/94‑1 (MQ=60)
                                                           CGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGC                                    <  SRR4302542.1301863/94‑1 (MQ=60)
                                                           CGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGC                                    <  SRR4302542.6835798/94‑1 (MQ=60)
                                                           CGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGC                                    <  SRR4302542.1468237/94‑1 (MQ=60)
                                                            GGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCG                                   <  SRR4302542.3442840/94‑1 (MQ=60)
                                                            GGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCTCGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCG                                   <  SRR4302542.3450307/94‑1 (MQ=60)
                                                            GGAGTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCG                                   <  SRR4302542.7067961/94‑1 (MQ=60)
                                                              AGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGAC                                 >  SRR4302542.7404315/1‑94 (MQ=60)
                                                               GTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACC                                <  SRR4302542.7126296/94‑1 (MQ=60)
                                                               GTGCGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACC                                <  SRR4302542.5020457/94‑1 (MQ=60)
                                                                  CGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGG                             >  SRR4302542.2061605/1‑94 (MQ=60)
                                                                  CGCGCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGG                             <  SRR4302542.3160662/94‑1 (MQ=60)
                                                                    CGCAGTCCCCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGA                           <  SRR4302542.6483314/94‑1 (MQ=60)
                                                                     GCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAA                          >  SRR4302542.2883813/1‑94 (MQ=60)
                                                                     GCAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTCCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAA                          <  SRR4302542.6939036/94‑1 (MQ=60)
                                                                      CAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAG                         <  SRR4302542.377909/94‑1 (MQ=60)
                                                                      CAGTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAG                         >  SRR4302542.1458299/1‑94 (MQ=60)
                                                                        GTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCC                       >  SRR4302542.972041/1‑94 (MQ=60)
                                                                        GTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCC                       >  SRR4302542.5006664/1‑94 (MQ=60)
                                                                        GTCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCC                       <  SRR4302542.2142952/94‑1 (MQ=60)
                                                                         TCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCT                      <  SRR4302542.6705696/94‑1 (MQ=60)
                                                                         TCACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCT                      >  SRR4302542.71060/1‑94 (MQ=60)
                                                                           ACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGG                    <  SRR4302542.7057601/94‑1 (MQ=60)
                                                                           ACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGG                    >  SRR4302542.2847049/1‑94 (MQ=60)
                                                                           ACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGG                    <  SRR4302542.2052170/94‑1 (MQ=60)
                                                                           ACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGG                    <  SRR4302542.6886081/94‑1 (MQ=60)
                                                                           ACCGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGG                    >  SRR4302542.2872890/1‑94 (MQ=60)
                                                                             CGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGG                  >  SRR4302542.4634389/1‑94 (MQ=60)
                                                                             CGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGG                  >  SRR4302542.2992181/1‑94 (MQ=60)
                                                                             CGGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGG                  <  SRR4302542.3990686/94‑1 (MQ=60)
                                                                              GGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGG                 <  SRR4302542.2499297/94‑1 (MQ=60)
                                                                              GGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGG                 <  SRR4302542.5216503/94‑1 (MQ=60)
                                                                              GGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGG                 <  SRR4302542.5503859/94‑1 (MQ=60)
                                                                              GGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGG                 <  SRR4302542.2450362/94‑1 (MQ=60)
                                                                              GGAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGG                 <  SRR4302542.3253530/94‑1 (MQ=60)
                                                                               GAGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGC                >  SRR4302542.1682739/1‑94 (MQ=60)
                                                                                AGCGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAAAAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCA               <  SRR4302542.4547479/94‑1 (MQ=60)
                                                                                  CGTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATC             >  SRR4302542.7384777/1‑94 (MQ=60)
                                                                                   GTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCA            <  SRR4302542.4838101/94‑1 (MQ=60)
                                                                                   GTACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCA            <  SRR4302542.1926970/94‑1 (MQ=60)
                                                                                     ACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATA          <  SRR4302542.3302053/94‑1 (MQ=60)
                                                                                     ACACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATA          <  SRR4302542.236888/94‑1 (MQ=60)
                                                                                      CACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATAC         >  SRR4302542.4575411/1‑94 (MQ=60)
                                                                                      CACGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATAC         <  SRR4302542.1053441/94‑1 (MQ=60)
                                                                                        CGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCC       <  SRR4302542.2079012/94‑1 (MQ=60)
                                                                                        CGCAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCC       >  SRR4302542.5944399/1‑94 (MQ=60)
                                                                                          CAGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCCTT     >  SRR4302542.1777307/1‑94 (MQ=60)
                                                                                           AGCACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACACGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCCTTC    >  SRR4302542.4683790/1‑94 (MQ=60)
                                                                                             CACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCCTTCAT  >  SRR4302542.2921158/1‑94 (MQ=60)
                                                                                             CACGTGAGGATGACGAGCACATCCCGGTGCAAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCCTTCAT  <  SRR4302542.5101552/94‑1 (MQ=60)
                                                                                             |                                                                                             
CAATCAACAGTTGCTAACTCTGCTGTAAAAGGCCGTCGGCGGTGCAGCCAGTTTGGTGCCGGAGTGCGCGCAGTCACCGGAGCGTACACGCAGTACGTGAGGATGACGAGCACATCCCGGTGCCAAAATGGCAAACAAGCCAGGCCGATTAGCGACCAGGGAAGCCTGGGGGCATCATACCCTTCAT  >  NC_000913/2744306‑2744492

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑