Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,747,477 |
G→A |
intergenic (+69/+659) |
b4540 → / ← grpE |
hypothetical protein/GrpE |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,747,477 | 0 | G | A | 86.6%
| 747.9
/ 76.5
| 278 | intergenic (+69/+659) | b4540/grpE | hypothetical protein/GrpE |
| Reads supporting (aligned to +/- strand): ref base G (20/17); new base A (132/107); total (152/126) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.88e-03 |
Only 100 of 280 total aligned reads displayed.
TCCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTG > NC_000913/2747387‑2747567
|
atcTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCAcc < 2:1709198/91‑1 (MQ=255)
atcTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCAcc > 2:1334342/3‑93 (MQ=255)
atcTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCAcc > 2:5440200/3‑93 (MQ=255)
atcTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCAcc > 2:5272055/3‑93 (MQ=255)
cTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCaa < 1:2605855/93‑1 (MQ=255)
tGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAc > 1:7019495/1‑93 (MQ=255)
tGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAAc > 2:2145918/1‑93 (MQ=255)
gAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAActc < 2:331641/93‑1 (MQ=255)
aaaaaTGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACtct‑c > 2:2912667/1‑93 (MQ=255)
aaaTGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑ccc > 2:661254/1‑93 (MQ=255)
aaTGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCa < 2:891950/93‑1 (MQ=255)
aaTGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACCGGAAATCGATTCTGCACCAACTCT‑CCCa < 1:3265748/93‑1 (MQ=255)
aTGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCAc < 1:5994461/93‑1 (MQ=255)
tGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCAct > 1:224230/1‑93 (MQ=255)
tGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCAct > 1:3803337/1‑93 (MQ=255)
gACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCActc > 1:2822518/1‑93 (MQ=255)
gACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCActc < 2:1252419/93‑1 (MQ=255)
gACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCActc > 1:7407073/1‑93 (MQ=255)
gACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCActc > 2:6818906/1‑93 (MQ=255)
aCCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCActca < 2:5334985/93‑1 (MQ=255)
ccGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCActcac > 1:6083687/1‑93 (MQ=255)
ttGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCActcacctc > 2:1981539/1‑93 (MQ=255)
tgatgaCATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCActcacctca < 2:5947111/93‑1 (MQ=255)
gatgaCATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCActcacctcac < 1:3746690/93‑1 (MQ=255)
gaCATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACggg < 1:112929/93‑1 (MQ=255)
tcatGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCa > 1:3689729/1‑93 (MQ=255)
catGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCAt > 1:6674519/1‑93 (MQ=255)
atGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATc < 2:641929/93‑1 (MQ=255)
atGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATc > 1:4583322/1‑93 (MQ=255)
atGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATc > 1:7016272/1‑93 (MQ=255)
tGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCg > 1:1244908/1‑93 (MQ=255)
ggTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATTACTGGGAATCGATTCTGCACCAACTCTCCCCCCTCACCTCACGGGCGCATCg < 1:6157336/93‑1 (MQ=255)
ggTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGt < 2:3575699/93‑1 (MQ=255)
cgcgCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGctct < 2:518747/93‑1 (MQ=255)
gcgcAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTa < 2:6370070/93‑1 (MQ=255)
cgcAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTAc < 2:6281034/93‑1 (MQ=255)
cgcAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTAc < 2:960401/93‑1 (MQ=255)
gcAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTAcc > 2:1957072/1‑93 (MQ=255)
gcAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTAcc < 2:491831/93‑1 (MQ=255)
gcAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTAcc > 2:1487008/1‑93 (MQ=255)
gcAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTAcc > 1:4473327/1‑93 (MQ=255)
cAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCg > 2:1562006/1‑93 (MQ=255)
cAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCg > 2:4369228/1‑93 (MQ=255)
gTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTg > 1:1342401/1‑93 (MQ=255)
gTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CACACTCACCTCACGGGCGCATCGTGCTCTACCGTg > 2:1830096/1‑93 (MQ=255)
gAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGAt < 2:3921807/93‑1 (MQ=255)
gAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGAt > 1:5665773/1‑93 (MQ=255)
aaTTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTc < 2:3888670/93‑1 (MQ=255)
ttATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGc < 1:1895129/93‑1 (MQ=255)
tATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCt < 1:997549/93‑1 (MQ=255)
tATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCt < 2:4648953/93‑1 (MQ=255)
aTCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTg > 2:3813895/1‑93 (MQ=255)
aTCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTg > 1:3177368/1‑93 (MQ=255)
aTCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTg < 2:2666275/93‑1 (MQ=255)
aTCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTg > 2:259767/1‑93 (MQ=255)
tCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTgg > 1:934125/1‑93 (MQ=255)
cGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGga < 1:4980023/93‑1 (MQ=255)
cGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGga < 1:6889733/93‑1 (MQ=255)
cGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGga < 2:4116329/93‑1 (MQ=255)
gTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGgacg > 2:7329138/1‑93 (MQ=255)
ttGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGacgacg > 2:7465140/1‑93 (MQ=255)
tGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGc < 1:6483914/93‑1 (MQ=255)
tGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGc > 1:5311554/1‑93 (MQ=255)
tGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGCACGACGc > 2:2318840/1‑93 (MQ=255)
gATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGcc < 1:4373439/93‑1 (MQ=255)
atatCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCa < 2:5705616/93‑1 (MQ=255)
atCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATc < 2:142611/93‑1 (MQ=255)
tCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCa < 1:2069190/93‑1 (MQ=255)
tCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCa > 2:6444736/1‑93 (MQ=255)
aaCGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGt > 1:6572791/1‑93 (MQ=255)
aCGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTa < 1:2385347/93‑1 (MQ=255)
cGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTAt < 1:7214208/93‑1 (MQ=255)
gATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTAtg > 1:4081980/1‑93 (MQ=255)
gATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTAtg > 1:4252636/1‑93 (MQ=255)
aTGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTAtgc < 2:6102382/93‑1 (MQ=255)
gACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTAtgctg < 1:1758144/93‑1 (MQ=255)
ggAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAg > 2:7211021/1‑93 (MQ=255)
ggAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAg < 1:3377554/93‑1 (MQ=255)
ggAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAg < 2:6756685/93‑1 (MQ=255)
aaTCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTAc < 2:813578/93‑1 (MQ=255)
aaTCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTAc < 1:3640789/93‑1 (MQ=255)
aTCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACg > 1:3110036/1‑93 (MQ=255)
aTCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACg > 1:153493/1‑93 (MQ=255)
aTCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACg < 1:1103919/93‑1 (MQ=255)
aTCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACg < 1:1847300/93‑1 (MQ=255)
aTCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACg < 1:198330/93‑1 (MQ=255)
gATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGa > 2:6057355/1‑93 (MQ=255)
gATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGa < 1:5470321/93‑1 (MQ=255)
gATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGa > 1:5747309/1‑93 (MQ=255)
gATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGa < 1:643240/93‑1 (MQ=255)
aTTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGaa < 1:3882589/93‑1 (MQ=255)
aTTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGaa < 2:2786440/93‑1 (MQ=255)
aTTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGaa > 2:6648981/1‑93 (MQ=255)
aTTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGaa > 1:7509786/1‑93 (MQ=255)
aTTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGaa > 1:4667750/1‑93 (MQ=255)
ttCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAg > 1:5113370/1‑93 (MQ=255)
tCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGc < 2:5620775/93‑1 (MQ=255)
cTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGcc < 2:6521278/93‑1 (MQ=255)
tGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCt < 1:1427373/93‑1 (MQ=255)
tGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCt > 1:4436011/1‑93 (MQ=255)
|
TCCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTG > NC_000913/2747387‑2747567
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCGATCCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTGGCG > NC_000913/2747383‑2747570
|
TCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCA > SRR4302542.6795364/1‑94 (MQ=60)
TCGAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAAGCGATTCTGCG < SRR4302542.7475644/94‑1 (MQ=60)
GAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACC > SRR4302542.3160281/1‑94 (MQ=60)
GAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACC > SRR4302542.4621184/1‑94 (MQ=60)
GAT‑CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACC > SRR4302542.5433635/1‑94 (MQ=60)
atCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCA < SRR4302542.2008507/92‑1 (MQ=60)
atCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCA > SRR4302542.57280/3‑94 (MQ=60)
TCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAA > SRR4302542.1345465/1‑94 (MQ=60)
TCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAA > SRR4302542.2771762/1‑94 (MQ=60)
CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC > SRR4302542.5251445/1‑94 (MQ=60)
CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAAC > SRR4302542.7088474/1‑94 (MQ=60)
CTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAAC < SRR4302542.2631054/94‑1 (MQ=60)
TGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACT < SRR4302542.6245897/94‑1 (MQ=60)
TGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACT > SRR4302542.333392/1‑94 (MQ=60)
GAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT > SRR4302542.1417059/1‑94 (MQ=60)
GAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT > SRR4302542.332455/1‑94 (MQ=60)
AATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCAC > SRR4302542.870460/1‑94 (MQ=60)
AATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACCGGAAATCGATTCTGCACCAACTCT‑CCCAC < SRR4302542.3296580/94‑1 (MQ=60)
ATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACT > SRR4302542.3840984/1‑94 (MQ=60)
ATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACT < SRR4302542.7209144/94‑1 (MQ=60)
ATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACT < SRR4302542.6052522/94‑1 (MQ=60)
ATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACT < SRR4302542.6141108/94‑1 (MQ=60)
ATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACT > SRR4302542.226172/1‑94 (MQ=60)
TGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTC > SRR4302542.7479565/1‑94 (MQ=60)
TGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTC > SRR4302542.2930273/1‑94 (MQ=60)
TGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTC > SRR4302542.2849660/1‑94 (MQ=60)
ACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCAC > SRR4302542.6142589/1‑94 (MQ=60)
CCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACC < SRR4302542.3715105/94‑1 (MQ=60)
CCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACC > SRR4302542.3799250/1‑94 (MQ=60)
CGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCT > SRR4302542.1987805/1‑94 (MQ=60)
CGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCT > SRR4302542.7408520/1‑94 (MQ=60)
CGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCT > SRR4302542.6645147/1‑94 (MQ=60)
TTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCA > SRR4302542.3671049/1‑94 (MQ=60)
TGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCAC > SRR4302542.1992072/1‑94 (MQ=60)
GATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACG < SRR4302542.3783771/94‑1 (MQ=60)
ATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGG > SRR4302542.5889040/1‑94 (MQ=60)
ATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGG > SRR4302542.7323460/1‑94 (MQ=60)
TGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGG < SRR4302542.3904178/94‑1 (MQ=60)
TGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGG < SRR4302542.7087769/94‑1 (MQ=60)
GACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGC < SRR4302542.113855/94‑1 (MQ=60)
GACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGC > SRR4302542.1844065/1‑94 (MQ=60)
ACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCG > SRR4302542.3976037/1‑94 (MQ=60)
ATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCA > SRR4302542.3726238/1‑94 (MQ=60)
ATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCA > SRR4302542.1884327/1‑94 (MQ=60)
TCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCAT > SRR4302542.6740273/1‑94 (MQ=60)
TCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCAT < SRR4302542.6516073/94‑1 (MQ=60)
CATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATC < SRR4302542.150571/94‑1 (MQ=60)
CATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATC > SRR4302542.4628162/1‑94 (MQ=60)
CATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATC > SRR4302542.7085183/1‑94 (MQ=60)
CATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATC > SRR4302542.7085184/1‑94 (MQ=60)
ATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCG < SRR4302542.6106561/94‑1 (MQ=60)
ATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCG < SRR4302542.5160182/94‑1 (MQ=60)
ATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCG > SRR4302542.1255611/1‑94 (MQ=60)
GGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATTACTGGGAATCGATTCTGCACCAACTCTCCCCCCTCACCTCACGGGCGCATCGT < SRR4302542.6216969/94‑1 (MQ=60)
GCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTC < SRR4302542.2814960/94‑1 (MQ=60)
CGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACC > SRR4302542.483508/1‑94 (MQ=60)
CGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACC > SRR4302542.696513/1‑94 (MQ=60)
CGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACC > SRR4302542.4517201/1‑94 (MQ=60)
CGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACC > SRR4302542.3836308/1‑94 (MQ=60)
GCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCG > SRR4302542.4062003/1‑94 (MQ=60)
GCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCG > SRR4302542.2498666/1‑94 (MQ=60)
AGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTG > SRR4302542.1353954/1‑94 (MQ=60)
TGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGAT > SRR4302542.3447829/1‑94 (MQ=60)
TGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGAT > SRR4302542.5720808/1‑94 (MQ=60)
AATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCG < SRR4302542.1362776/94‑1 (MQ=60)
AATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCG < SRR4302542.1130514/94‑1 (MQ=60)
ATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGC > SRR4302542.1151349/1‑94 (MQ=60)
TTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCCCTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCT < SRR4302542.6172608/94‑1 (MQ=60)
TTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCT > SRR4302542.1738265/1‑94 (MQ=60)
TTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCT < SRR4302542.5873175/94‑1 (MQ=60)
TTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCT < SRR4302542.1911531/94‑1 (MQ=60)
TATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTG > SRR4302542.3207482/1‑94 (MQ=60)
TATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTG < SRR4302542.1006133/94‑1 (MQ=60)
ATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGG > SRR4302542.942168/1‑94 (MQ=60)
CGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGAC < SRR4302542.3741047/94‑1 (MQ=60)
CGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGAC < SRR4302542.6957398/94‑1 (MQ=60)
CGGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGAC < SRR4302542.5028367/94‑1 (MQ=60)
GGTATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACG < SRR4302542.368014/94‑1 (MQ=60)
TATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGAGCATCGTGCTCTACCGTGATTCGCTGGACGAC > SRR4302542.7234093/1‑94 (MQ=60)
ATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACG > SRR4302542.4458664/1‑94 (MQ=60)
ATTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACG > SRR4302542.5112521/1‑94 (MQ=60)
TTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGC > SRR4302542.5363156/1‑94 (MQ=60)
TTGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGC > SRR4302542.1291399/1‑94 (MQ=60)
TGATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCC < SRR4302542.6547802/94‑1 (MQ=60)
GATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCA < SRR4302542.4416367/94‑1 (MQ=60)
ATATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCAT < SRR4302542.2327484/94‑1 (MQ=60)
ATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCA < SRR4302542.1225289/94‑1 (MQ=60)
ATCAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCA > SRR4302542.3018098/1‑94 (MQ=60)
TCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAG < SRR4302542.2087076/94‑1 (MQ=60)
CAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGT < SRR4302542.789763/94‑1 (MQ=60)
CAACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGT > SRR4302542.6637557/1‑94 (MQ=60)
AACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTA > SRR4302542.7484847/1‑94 (MQ=60)
ACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTAT < SRR4302542.2407473/94‑1 (MQ=60)
ACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTAT < SRR4302542.5503763/94‑1 (MQ=60)
ACGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTAT < SRR4302542.321301/94‑1 (MQ=60)
ACGAAGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTAT < SRR4302542.5566291/94‑1 (MQ=60)
CGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATG < SRR4302542.7284994/94‑1 (MQ=60)
CGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATG > SRR4302542.4655467/1‑94 (MQ=60)
CGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATG > SRR4302542.4122212/1‑94 (MQ=60)
CGATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATG > SRR4302542.4294524/1‑94 (MQ=60)
GATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGC > SRR4302542.5530374/1‑94 (MQ=60)
ATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCT < SRR4302542.967443/94‑1 (MQ=60)
ATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCT < SRR4302542.4542098/94‑1 (MQ=60)
ATGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCT < SRR4302542.4270242/94‑1 (MQ=60)
TGACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTG > SRR4302542.2058622/1‑94 (MQ=60)
GACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGC > SRR4302542.5281432/1‑94 (MQ=60)
GACTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGC < SRR4302542.1773402/94‑1 (MQ=60)
CTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGA > SRR4302542.4504454/1‑94 (MQ=60)
CTGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGA > SRR4302542.6327818/1‑94 (MQ=60)
CTGGAAATCGATTCTGAGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGA > SRR4302542.4209748/1‑94 (MQ=60)
TGGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAG < SRR4302542.6834001/94‑1 (MQ=60)
GGAAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGT < SRR4302542.3409295/94‑1 (MQ=60)
GGAAATCGATTCTCCCCCACCTCT‑CCCACTCACCCCACGGGCGCATCGTGCTCTACCGTGATTCGCTTGACGACGCCAACAGTATGCTGCGAGT < SRR4302542.7542505/94‑1 (MQ=60)
AAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTAC < SRR4302542.4339616/94‑1 (MQ=60)
AAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTAC > SRR4302542.3273767/1‑94 (MQ=60)
AAATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTAC > SRR4302542.4476909/1‑94 (MQ=60)
AATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACG > SRR4302542.6719334/1‑94 (MQ=60)
AATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACG > SRR4302542.154794/1‑94 (MQ=60)
AATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACG > SRR4302542.2196076/1‑94 (MQ=60)
AATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACG > SRR4302542.3139592/1‑94 (MQ=60)
AATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACG < SRR4302542.3674748/94‑1 (MQ=60)
ATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGT < SRR4302542.1113358/94‑1 (MQ=60)
ATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGT < SRR4302542.1863280/94‑1 (MQ=60)
ATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGT < SRR4302542.200015/94‑1 (MQ=60)
ATCGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGT > SRR4302542.4690754/1‑94 (MQ=60)
CGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGA < SRR4302542.1462663/94‑1 (MQ=60)
CGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGA > SRR4302542.6578430/1‑94 (MQ=60)
CGATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGA > SRR4302542.5803100/1‑94 (MQ=60)
GATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAA > SRR4302542.7583646/1‑94 (MQ=60)
GATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAA > SRR4302542.4713375/1‑94 (MQ=60)
GATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAA < SRR4302542.648770/94‑1 (MQ=60)
GATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAA < SRR4302542.5523463/94‑1 (MQ=60)
GATTCTGCACCAACTCT‑CCCACACACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAA > SRR4302542.1900843/1‑94 (MQ=60)
ATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAG < SRR4302542.3920934/94‑1 (MQ=60)
ATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAG > SRR4302542.6858864/1‑94 (MQ=60)
ATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAG > SRR4302542.1841573/1‑94 (MQ=60)
ATTCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAG > SRR4302542.5163031/1‑94 (MQ=60)
TCTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCC < SRR4302542.6153890/94‑1 (MQ=60)
CTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCT < SRR4302542.4516469/94‑1 (MQ=60)
CTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCT < SRR4302542.3855067/94‑1 (MQ=60)
CTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCT > SRR4302542.4479555/1‑94 (MQ=60)
CTGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCT > SRR4302542.6580688/1‑94 (MQ=60)
TGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTG < SRR4302542.2364803/94‑1 (MQ=60)
TGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTG > SRR4302542.1850039/1‑94 (MQ=60)
TGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTG < SRR4302542.1439726/94‑1 (MQ=60)
TGCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTG > SRR4302542.4664257/1‑94 (MQ=60)
GCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTGG < SRR4302542.2425933/94‑1 (MQ=60)
GCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTGG > SRR4302542.6866377/1‑94 (MQ=60)
GCACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTGG < SRR4302542.1252686/94‑1 (MQ=60)
CACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTGGC > SRR4302542.5282212/1‑94 (MQ=60)
CACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTGGC > SRR4302542.2909673/1‑94 (MQ=60)
ACCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTGGCG > SRR4302542.2283824/1‑94 (MQ=60)
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TCGATCCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCT‑CCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTGGCG > NC_000913/2747383‑2747570
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
