Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,820,144 |
Δ1 bp |
intergenic (+24/+18) |
b4542 → / ← oraA |
hypothetical protein/OraA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,820,143 | 0 | G | . | 100.0%
| 1140.2
/ NA
| 247 | intergenic (+23/+19) | b4542/oraA | hypothetical protein/OraA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (134/113); total (134/113) |
Only 100 of 257 total aligned reads displayed.
GCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGC > NC_000913/2820051‑2820231
|
gCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAg > 2:7037257/1‑93 (MQ=255)
tAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAgta > 1:5484868/1‑91 (MQ=255)
aCGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAgtaaa > 1:5155796/1‑89 (MQ=255)
aCGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAgtaaa > 2:5986521/1‑89 (MQ=255)
aCGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAgtaaa < 2:1664305/93‑5 (MQ=255)
gAAATATCGCCACCAGCTCCAGCGTCTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAAt > 2:3810117/1‑93 (MQ=255)
gAAATATCGCCACCAGCCCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAAt > 1:2183494/1‑93 (MQ=255)
aaTATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATAc < 1:6674421/93‑1 (MQ=255)
tatCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCg > 2:5827459/1‑93 (MQ=255)
tatCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCg > 2:6212300/1‑93 (MQ=255)
tatCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCg > 2:5158821/1‑93 (MQ=255)
atCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGt > 1:2728506/1‑93 (MQ=255)
gCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATg > 1:4681141/1‑93 (MQ=255)
gCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATg < 1:3736268/93‑1 (MQ=255)
ccaccaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGc > 2:1183077/1‑93 (MQ=255)
ccaccaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGc > 2:4809774/1‑93 (MQ=255)
caccaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCg > 2:3154503/1‑93 (MQ=255)
accaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGt > 1:186037/1‑93 (MQ=255)
accaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGt > 2:2426504/1‑93 (MQ=255)
accaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGt > 1:6487130/1‑93 (MQ=255)
ccaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGtt < 1:2507475/93‑1 (MQ=255)
aGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCa < 2:3653586/93‑1 (MQ=255)
cTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGt < 1:1540781/93‑1 (MQ=255)
cTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGt < 1:4528450/93‑1 (MQ=255)
tCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTc > 2:1440956/1‑93 (MQ=255)
tCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTc < 1:7153992/93‑1 (MQ=255)
ccAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCg > 1:6041779/1‑93 (MQ=255)
aGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGc > 1:2290554/1‑93 (MQ=255)
aGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGc > 1:1928453/1‑93 (MQ=255)
gCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCa > 1:316247/1‑93 (MQ=255)
gtgtCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCaaa > 2:274909/1‑93 (MQ=255)
tgtCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCaaaa > 1:898979/1‑93 (MQ=255)
tgtCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCaaaa > 2:1928219/1‑93 (MQ=255)
tgtCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCaaaa > 1:608405/1‑93 (MQ=255)
gtCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAAt < 2:3393110/93‑1 (MQ=255)
gtCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAAt < 1:1029270/93‑1 (MQ=255)
gtCTTAACCGCCGGGCTGGTAACTGAAAAGGGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAAt > 2:1762153/1‑93 (MQ=255)
tCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAAtt > 1:3131973/1‑93 (MQ=255)
cTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAAttt < 2:3429605/93‑1 (MQ=255)
ttAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc > 1:2571466/1‑93 (MQ=255)
ttAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc < 2:2919778/93‑1 (MQ=255)
ccgccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCa > 2:4642146/1‑93 (MQ=255)
cgccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCaa > 2:1253485/1‑93 (MQ=255)
gccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCaaa < 2:2883768/93‑1 (MQ=255)
gccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCaaa > 1:3937049/1‑93 (MQ=255)
cgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAtc < 2:5217397/93‑1 (MQ=255)
gggCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAtct < 1:5530536/93‑1 (MQ=255)
ggCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAtctc > 1:5055692/1‑93 (MQ=255)
ggCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAtctc < 2:778880/93‑1 (MQ=255)
cTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCt > 2:3241127/1‑93 (MQ=255)
tGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTg > 2:3771232/1‑93 (MQ=255)
tGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTg < 1:791811/93‑1 (MQ=255)
tGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTg > 2:6252803/1‑93 (MQ=255)
gTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGa < 1:472808/93‑1 (MQ=255)
gTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGa < 1:1700931/93‑1 (MQ=255)
aaCTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGata < 2:6500892/93‑1 (MQ=255)
aaCTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGata < 1:2653395/93‑1 (MQ=255)
aCTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGatat < 1:4887856/93‑1 (MQ=255)
cTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAACATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATc < 1:7302029/93‑1 (MQ=255)
tGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCt > 2:6935992/1‑93 (MQ=255)
tGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCt > 1:494605/1‑93 (MQ=255)
aaaaGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTc < 2:4353185/93‑1 (MQ=255)
aaGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCa > 1:7198675/1‑93 (MQ=255)
gTGGGAATAAGATACGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATc > 2:6447197/1‑93 (MQ=255)
tGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCa > 2:4487624/1‑93 (MQ=255)
tGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCa < 2:7355990/93‑1 (MQ=255)
ggAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGa < 2:489914/93‑1 (MQ=255)
ggAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGa > 2:1361259/1‑93 (MQ=255)
ggAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGa < 2:6751407/93‑1 (MQ=255)
gAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGAt > 1:2869793/1‑93 (MQ=255)
gAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGAt > 1:4512802/1‑93 (MQ=255)
ataagataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAg > 1:1459554/1‑93 (MQ=255)
ataagataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAg > 2:5562471/1‑93 (MQ=255)
ataagataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAg > 1:5377709/1‑93 (MQ=255)
taagataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGc < 2:1972268/93‑1 (MQ=255)
aagataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGcc > 1:5992077/1‑93 (MQ=255)
agataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCa < 1:1277508/93‑1 (MQ=255)
agataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCa < 2:2635054/93‑1 (MQ=255)
agataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCa > 1:2413800/1‑93 (MQ=255)
agataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCa > 1:6784880/1‑93 (MQ=255)
ataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACg > 2:2506156/1‑93 (MQ=255)
taagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGa > 1:1625123/1‑93 (MQ=255)
taagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGa < 2:199102/93‑1 (MQ=255)
agTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATa < 2:5069408/93‑1 (MQ=255)
agTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATa < 1:5684898/93‑1 (MQ=255)
gTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATag > 2:6042599/1‑93 (MQ=255)
ttCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGc < 1:784176/93‑1 (MQ=255)
cTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAg < 2:824268/93‑1 (MQ=255)
ttGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGa > 1:626665/1‑93 (MQ=255)
ttGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGa > 2:4089337/1‑93 (MQ=255)
gACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGaaa < 2:6594081/93‑1 (MQ=255)
gACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGaaa < 2:7086965/93‑1 (MQ=255)
cTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAAc < 1:3538667/93‑1 (MQ=255)
cTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAAc > 2:2530603/1‑93 (MQ=255)
tGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACg < 2:6153908/93‑1 (MQ=255)
tGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACg > 1:5271747/1‑93 (MQ=255)
tGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACg > 1:4169483/1‑93 (MQ=255)
tGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACg < 1:7385722/93‑1 (MQ=255)
gggAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGc > 1:5930362/1‑93 (MQ=255)
gggAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGc > 1:3842685/1‑93 (MQ=255)
|
GCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGC > NC_000913/2820051‑2820231
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGAT > NC_000913/2820051‑2820236
|
GCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGT < SRR4302542.4791061/94‑1 (MQ=60)
AACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAA > SRR4302542.5205905/1‑94 (MQ=60)
CGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAAT < SRR4302542.3232946/94‑1 (MQ=60)
CGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAAT > SRR4302542.3067743/1‑94 (MQ=60)
CGAAATATCGCCACCAGCCCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAAT > SRR4302542.2202303/1‑94 (MQ=60)
GAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATA > SRR4302542.4562146/1‑94 (MQ=60)
GAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATA > SRR4302542.6037579/1‑94 (MQ=60)
AATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACC > SRR4302542.3188476/1‑94 (MQ=60)
AATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACC < SRR4302542.6740175/94‑1 (MQ=60)
AATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACC > SRR4302542.2581589/1‑94 (MQ=60)
AATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACC < SRR4302542.1627394/94‑1 (MQ=60)
AATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACC < SRR4302542.3849164/94‑1 (MQ=60)
ATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCG > SRR4302542.1486876/1‑94 (MQ=60)
TATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGT < SRR4302542.1648042/94‑1 (MQ=60)
TATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGT > SRR4302542.5136936/1‑94 (MQ=60)
TATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGT < SRR4302542.7265680/94‑1 (MQ=60)
TATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGT > SRR4302542.2754830/1‑94 (MQ=60)
ATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTA > SRR4302542.7353027/1‑94 (MQ=60)
TCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTAT < SRR4302542.5554303/94‑1 (MQ=60)
TCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTAT < SRR4302542.3992662/94‑1 (MQ=60)
CGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATG < SRR4302542.6418964/94‑1 (MQ=60)
CGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATG > SRR4302542.4726882/1‑94 (MQ=60)
GCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGC < SRR4302542.3773257/94‑1 (MQ=60)
CACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGT > SRR4302542.6127653/1‑94 (MQ=60)
CACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGT > SRR4302542.187618/1‑94 (MQ=60)
CACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGT > SRR4302542.6551049/1‑94 (MQ=60)
ACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTT < SRR4302542.976721/94‑1 (MQ=60)
CCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTC < SRR4302542.2531810/94‑1 (MQ=60)
CAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCA < SRR4302542.2948563/94‑1 (MQ=60)
GCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGT > SRR4302542.270895/1‑94 (MQ=60)
CTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTC < SRR4302542.1554089/94‑1 (MQ=60)
CTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTC < SRR4302542.4572803/94‑1 (MQ=60)
CTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTC < SRR4302542.634104/94‑1 (MQ=60)
TCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCG < SRR4302542.7224175/94‑1 (MQ=60)
TCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCG > SRR4302542.6100264/1‑94 (MQ=60)
CCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGG > SRR4302542.535974/1‑94 (MQ=60)
CCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGG > SRR4302542.4745059/1‑94 (MQ=60)
CAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGC > SRR4302542.2310237/1‑94 (MQ=60)
CAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGC > SRR4302542.522380/1‑94 (MQ=60)
CAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGC > SRR4302542.1945109/1‑94 (MQ=60)
AGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCA > SRR4302542.2217760/1‑94 (MQ=60)
AGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCA > SRR4302542.319001/1‑94 (MQ=60)
GTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAA > SRR4302542.613639/1‑94 (MQ=60)
GTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAA > SRR4302542.906761/1‑94 (MQ=60)
GTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAA > SRR4302542.3877082/1‑94 (MQ=60)
TGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAAT < SRR4302542.6974838/94‑1 (MQ=60)
TGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GAAAAATACCGTATGCGTTCAGTCGGCAAAAT > SRR4302542.855788/1‑94 (MQ=60)
GTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATT > SRR4302542.3161758/1‑94 (MQ=60)
GTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATT < SRR4302542.1038138/94‑1 (MQ=60)
TCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTT < SRR4302542.2645823/94‑1 (MQ=60)
CTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTC > SRR4302542.1412415/1‑94 (MQ=60)
CTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTC > SRR4302542.2596381/1‑94 (MQ=60)
TTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCG > SRR4302542.5104296/1‑94 (MQ=60)
AACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCC < SRR4302542.4054035/94‑1 (MQ=60)
CCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAA < SRR4302542.6840256/94‑1 (MQ=60)
CGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAA > SRR4302542.3975941/1‑94 (MQ=60)
CCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATC > SRR4302542.3940039/1‑94 (MQ=60)
CGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCT < SRR4302542.1617231/94‑1 (MQ=60)
GGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTC < SRR4302542.5584291/94‑1 (MQ=60)
GGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTC > SRR4302542.5104789/1‑94 (MQ=60)
GCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCT < SRR4302542.5434429/94‑1 (MQ=60)
CTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTG < SRR4302542.4378689/94‑1 (MQ=60)
CTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTG > SRR4302542.1864589/1‑94 (MQ=60)
TGGTAACTGCAAACTGGGATTAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGG > SRR4302542.4890759/1‑94 (MQ=60)
TGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGG > SRR4302542.2478570/1‑94 (MQ=60)
TGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGG < SRR4302542.798630/94‑1 (MQ=60)
TGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGG < SRR4302542.6016472/94‑1 (MQ=60)
TGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGG > SRR4302542.2626894/1‑94 (MQ=60)
GTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGAT < SRR4302542.1715673/94‑1 (MQ=60)
GTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGAT < SRR4302542.476900/94‑1 (MQ=60)
AACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATAT < SRR4302542.5882669/94‑1 (MQ=60)
AACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATAT < SRR4302542.2679021/94‑1 (MQ=60)
ACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATC < SRR4302542.4935406/94‑1 (MQ=60)
ACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATC > SRR4302542.2486242/1‑94 (MQ=60)
CTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAACATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCT < SRR4302542.7373575/94‑1 (MQ=60)
CTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCT > SRR4302542.880429/1‑94 (MQ=60)
CTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCT < SRR4302542.4584881/94‑1 (MQ=60)
CTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCT > SRR4302542.498866/1‑94 (MQ=60)
GAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTC > SRR4302542.6055333/1‑94 (MQ=60)
AAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATAGCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCA < SRR4302542.2757906/94‑1 (MQ=60)
AAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCA > SRR4302542.7269320/1‑94 (MQ=60)
AAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCAT > SRR4302542.79371/1‑94 (MQ=60)
GTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCA > SRR4302542.788124/1‑94 (MQ=60)
GGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGAT > SRR4302542.4557027/1‑94 (MQ=60)
GGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGAT > SRR4302542.2897364/1‑94 (MQ=60)
AATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAG > SRR4302542.508691/1‑94 (MQ=60)
AATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAG < SRR4302542.1355960/94‑1 (MQ=60)
AATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAG > SRR4302542.1472154/1‑94 (MQ=60)
AATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAG > SRR4302542.1847895/1‑94 (MQ=60)
AATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAG < SRR4302542.7089988/94‑1 (MQ=60)
AATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAG > SRR4302542.5429960/1‑94 (MQ=60)
ATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGC > SRR4302542.6636219/1‑94 (MQ=60)
ATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGC > SRR4302542.2010612/1‑94 (MQ=60)
TAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCC > SRR4302542.6050116/1‑94 (MQ=60)
AAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCA > SRR4302542.2437266/1‑94 (MQ=60)
AAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCA > SRR4302542.6851613/1‑94 (MQ=60)
AAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCA > SRR4302542.2065655/1‑94 (MQ=60)
AAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCA > SRR4302542.5109853/1‑94 (MQ=60)
AAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGAGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCA > SRR4302542.7442416/1‑94 (MQ=60)
AGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCAC > SRR4302542.3472791/1‑94 (MQ=60)
AGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCAC > SRR4302542.2853190/1‑94 (MQ=60)
AGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCAC < SRR4302542.1288476/94‑1 (MQ=60)
AGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCAC > SRR4302542.2423744/1‑94 (MQ=60)
GATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACG > SRR4302542.4702804/1‑94 (MQ=60)
GATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACG < SRR4302542.6803036/94‑1 (MQ=60)
ATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGA > SRR4302542.1639147/1‑94 (MQ=60)
AAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATA < SRR4302542.569763/94‑1 (MQ=60)
AGTTTTCTTGACTGGGAA‑GTAAAATACCGTGTGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAG < SRR4302542.192847/94‑1 (MQ=60)
AGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAG < SRR4302542.3613790/94‑1 (MQ=60)
AGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAG < SRR4302542.5740099/94‑1 (MQ=60)
GTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGA < SRR4302542.5549528/94‑1 (MQ=60)
TTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAG < SRR4302542.5376991/94‑1 (MQ=60)
TTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAG < SRR4302542.7486946/94‑1 (MQ=60)
TTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCA < SRR4302542.790940/94‑1 (MQ=60)
TTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCA > SRR4302542.734292/1‑94 (MQ=60)
TCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAG < SRR4302542.1162046/94‑1 (MQ=60)
CTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGA > SRR4302542.632055/1‑94 (MQ=60)
CTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGA > SRR4302542.4964814/1‑94 (MQ=60)
CTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGA > SRR4302542.2247029/1‑94 (MQ=60)
CTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGA > SRR4302542.4375220/1‑94 (MQ=60)
ACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAAC > SRR4302542.575675/1‑94 (MQ=60)
CTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACG > SRR4302542.5322973/1‑94 (MQ=60)
CTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACG > SRR4302542.4210606/1‑94 (MQ=60)
CTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACG < SRR4302542.3571739/94‑1 (MQ=60)
CTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACG < SRR4302542.6116150/94‑1 (MQ=60)
TGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGC > SRR4302542.3880670/1‑94 (MQ=60)
TGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGC > SRR4302542.5987819/1‑94 (MQ=60)
TGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGC < SRR4302542.7458024/94‑1 (MQ=60)
GAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGG < SRR4302542.2729578/94‑1 (MQ=60)
GAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGG < SRR4302542.1368258/94‑1 (MQ=60)
GAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGG > SRR4302542.5863936/1‑94 (MQ=60)
AAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGA < SRR4302542.2239144/94‑1 (MQ=60)
AGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGAT > SRR4302542.6846777/1‑94 (MQ=60)
AGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGAT < SRR4302542.3425412/94‑1 (MQ=60)
AGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGAT < SRR4302542.3131136/94‑1 (MQ=60)
AGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGAT < SRR4302542.3867856/94‑1 (MQ=60)
|
GCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGAT > NC_000913/2820051‑2820236
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
