Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,005,399 |
+C |
coding (1044/1092 nt) |
ygeW → |
putative carbamoyl transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,005,398 | 1 | . | C | 100.0%
| 968.0
/ NA
| 282 | I348T (ATC→ACC) | ygeW | putative carbamoyl transferase |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (143/139); total (143/139) |
Only 100 of 312 total aligned reads displayed.
AGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑CTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCG > NC_000913/3005306‑3005485
|
agaagGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCgatgat > 2:5849119/1‑93 (MQ=255)
aagGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑cc < 2:3684386/93‑2 (MQ=255)
aagGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑cc < 2:3876241/93‑2 (MQ=255)
aagGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑cc < 1:2354625/93‑2 (MQ=255)
agGTGAAGTGACTGAAGGCGGATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑cct > 1:1151706/1‑91 (MQ=255)
ggTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑cctg > 2:438100/1‑90 (MQ=255)
gAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTcc > 1:5388472/1‑93 (MQ=255)
gAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTcc > 1:4966060/1‑93 (MQ=255)
gAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTcc < 2:175431/93‑1 (MQ=255)
aCTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTaaa > 1:2007810/1‑93 (MQ=255)
aCTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTaaa > 2:467962/1‑93 (MQ=255)
aCTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTaaa < 1:144460/93‑1 (MQ=255)
aCTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTaaa < 2:379850/93‑1 (MQ=255)
tGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATa < 1:4817309/93‑1 (MQ=255)
tGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATa < 1:1815076/93‑1 (MQ=255)
gAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATAc < 1:1881739/93‑1 (MQ=255)
aaGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACg > 2:6363685/1‑93 (MQ=255)
ggCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGcc > 2:1362791/1‑93 (MQ=255)
gCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCa < 2:2703669/93‑1 (MQ=255)
gCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCa > 1:3134899/1‑93 (MQ=255)
gCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCa < 2:5154127/93‑1 (MQ=255)
gTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCaaa < 1:167855/93‑1 (MQ=255)
tATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGGTAAATACGCCaaa > 1:2420698/1‑93 (MQ=255)
tATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAAc > 2:4860938/1‑93 (MQ=255)
tATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAAc < 1:829546/93‑1 (MQ=255)
aTTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAAcc < 2:6088469/93‑1 (MQ=255)
tCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAg < 1:4603241/93‑1 (MQ=255)
cGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAgg < 1:3261842/93‑1 (MQ=255)
gAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGt < 1:4063405/93‑1 (MQ=255)
aaaaaTACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTg > 2:100541/1‑93 (MQ=255)
aaaaaTACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTg < 1:6585834/93‑1 (MQ=255)
aaaTACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCa < 2:2019147/93‑1 (MQ=255)
aaaTACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCa > 2:922958/1‑93 (MQ=255)
aaTACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCAc > 1:3688272/1‑93 (MQ=255)
aTACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACt > 2:4516881/1‑93 (MQ=255)
gTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCg > 1:6112324/1‑93 (MQ=255)
gTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCg < 2:5111390/93‑1 (MQ=255)
gTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCg > 1:675436/1‑93 (MQ=255)
tCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGc < 1:3426458/93‑1 (MQ=255)
tCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGc > 1:3604819/1‑93 (MQ=255)
tCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGc > 2:6542163/1‑93 (MQ=255)
cGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCa < 2:1233498/93‑1 (MQ=255)
gCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCaa < 1:5205079/93‑1 (MQ=255)
ctacctacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAAc < 2:3195150/93‑1 (MQ=255)
tacctacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAAct < 1:1238924/93‑1 (MQ=255)
tacctacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAAct > 2:1445389/1‑93 (MQ=255)
acctacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAActg > 2:6696894/1‑93 (MQ=255)
acctacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAActg < 1:5693440/93‑1 (MQ=255)
cctacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAActgc > 2:6473460/1‑93 (MQ=255)
cctacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAActgc < 2:6762487/93‑1 (MQ=255)
ctacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAActgct < 2:2836182/93‑1 (MQ=255)
ctacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAActgct > 2:2296481/1‑93 (MQ=255)
tacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAActgctg > 2:3548804/1‑93 (MQ=255)
tacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAActgctg > 2:824550/1‑93 (MQ=255)
acAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGa > 1:3053458/1‑93 (MQ=255)
acAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGa > 2:7497191/1‑93 (MQ=255)
cAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGaa < 1:767621/93‑1 (MQ=255)
cAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGaa > 1:714230/1‑93 (MQ=255)
aagaagCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAaag > 1:560489/1‑93 (MQ=255)
aagaagCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAaag > 1:7482051/1‑93 (MQ=255)
agaagCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAaaga < 1:2705069/93‑1 (MQ=255)
agaagCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAaaga < 1:2914526/93‑1 (MQ=255)
gaagCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAaagaa > 1:103097/1‑93 (MQ=255)
gaagCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAaagaa < 1:3346095/93‑1 (MQ=255)
gaagCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACAAGGTGCACTGCTCGAGCAACTGCTGAaagaa > 2:5623807/1‑93 (MQ=255)
agCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAgc > 2:2125568/1‑93 (MQ=255)
gCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAgcg > 2:5500169/1‑93 (MQ=255)
cAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCa > 1:6634999/1‑93 (MQ=255)
tGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAGTACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGaa < 1:6183755/93‑1 (MQ=255)
tGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCACGaa > 2:522151/1‑93 (MQ=255)
tGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGaa < 2:696112/93‑1 (MQ=255)
ggAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAc < 1:4349917/93‑1 (MQ=255)
aaGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAcgc < 2:2422124/93‑1 (MQ=255)
aaGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAcgc > 2:7034868/1‑93 (MQ=255)
gCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGt > 1:505022/1‑93 (MQ=255)
ccTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTg > 2:390307/1‑93 (MQ=255)
cTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGa < 2:2204306/93‑1 (MQ=255)
cTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGa > 2:3010747/1‑93 (MQ=255)
ttATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGaa > 1:6277342/1‑93 (MQ=255)
ttATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGaa > 2:184873/1‑93 (MQ=255)
tataTCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGaaa < 1:218748/93‑1 (MQ=255)
atatCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAAt < 2:7065819/93‑1 (MQ=255)
atatCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAAt > 1:2555180/1‑93 (MQ=255)
atcatcGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATaa < 2:4097088/93‑1 (MQ=255)
tcatcGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAc < 2:6178456/93‑1 (MQ=255)
tcatcGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAc < 1:6336816/93‑1 (MQ=255)
atcGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAccc < 1:6723428/93‑1 (MQ=255)
tcGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAcccc > 2:1618596/1‑93 (MQ=255)
cgccgcGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCt < 1:2052457/93‑1 (MQ=255)
cgccgcGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCt > 1:4175039/1‑93 (MQ=255)
gccgcGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTc > 2:6283644/1‑93 (MQ=255)
gccgcGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTc > 2:7368472/1‑93 (MQ=255)
gccgcGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTc > 1:5250300/1‑93 (MQ=255)
ccgcGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCg < 1:5219141/93‑1 (MQ=255)
ccgcGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCg < 2:6611846/93‑1 (MQ=255)
cgATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGc < 2:3943011/93‑1 (MQ=255)
gatgatcCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGcc > 2:7118785/1‑93 (MQ=255)
atgatcCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCg > 1:7402510/1‑93 (MQ=255)
atgatcCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCg > 2:4219564/1‑93 (MQ=255)
atgatcCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCg > 1:3933996/1‑93 (MQ=255)
|
AGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑CTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCG > NC_000913/3005306‑3005485
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑CTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGCT > NC_000913/3005306‑3005492
|
AGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑C > SRR4302542.1852812/1‑94 (MQ=60)
AAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cct < SRR4302542.2374852/94‑3 (MQ=60)
AAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cct < SRR4302542.488364/94‑3 (MQ=60)
AAGGTGAAGTGACTGAAGGCGGATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cct > SRR4302542.1161577/1‑92 (MQ=60)
AGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cctg < SRR4302542.3067864/94‑4 (MQ=60)
AGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cctg < SRR4302542.265749/94‑4 (MQ=60)
AGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cctg > SRR4302542.5709586/1‑91 (MQ=60)
GGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGT < SRR4302542.81289/94‑1 (MQ=60)
GGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGT < SRR4302542.2436980/94‑1 (MQ=60)
TGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCC > SRR4302542.5440804/1‑94 (MQ=60)
TGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCC > SRR4302542.2221781/1‑94 (MQ=60)
TGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCC > SRR4302542.5014280/1‑94 (MQ=60)
GTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTA > SRR4302542.256905/1‑94 (MQ=60)
TGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAA > SRR4302542.4595473/1‑94 (MQ=60)
GACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAA > SRR4302542.2025152/1‑94 (MQ=60)
GACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAA > SRR4302542.3900109/1‑94 (MQ=60)
ACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAAT < SRR4302542.145669/94‑1 (MQ=60)
TGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATAC < SRR4302542.1830798/94‑1 (MQ=60)
TGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATAC < SRR4302542.4589244/94‑1 (MQ=60)
TGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATAC < SRR4302542.4864256/94‑1 (MQ=60)
GAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATANN > SRR4302542.3682719/1‑94 (MQ=60)
GAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACG < SRR4302542.7297794/94‑1 (MQ=60)
GAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACG < SRR4302542.1898025/94‑1 (MQ=60)
AGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCC > SRR4302542.3222826/1‑94 (MQ=60)
GGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCA > SRR4302542.3164704/1‑94 (MQ=60)
NNGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAA < SRR4302542.1832674/94‑1 (MQ=60)
GCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAA > SRR4302542.1984032/1‑94 (MQ=60)
GCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAA < SRR4302542.2150184/94‑1 (MQ=60)
GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGGTAAATACGCCAAA > SRR4302542.2444234/1‑94 (MQ=60)
GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAAC < SRR4302542.169277/94‑1 (MQ=60)
GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAAC > SRR4302542.5626714/1‑94 (MQ=60)
GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAAC > SRR4302542.4353945/1‑94 (MQ=60)
TATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACC < SRR4302542.6814371/94‑1 (MQ=60)
TATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACC < SRR4302542.836712/94‑1 (MQ=60)
ATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCA < SRR4302542.5975681/94‑1 (MQ=60)
TTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAG < SRR4302542.5188859/94‑1 (MQ=60)
TTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAG < SRR4302542.212573/94‑1 (MQ=60)
TCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGG < SRR4302542.5277472/94‑1 (MQ=60)
TCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGG < SRR4302542.2025543/94‑1 (MQ=60)
TCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGG < SRR4302542.4648229/94‑1 (MQ=60)
CGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGT < SRR4302542.6945064/94‑1 (MQ=60)
CGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGT < SRR4302542.3292647/94‑1 (MQ=60)
CGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGT > SRR4302542.4876549/1‑94 (MQ=60)
GAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTG < SRR4302542.6233482/94‑1 (MQ=60)
GAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTG < SRR4302542.4103474/94‑1 (MQ=60)
GAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTG < SRR4302542.752796/94‑1 (MQ=60)
GAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTG < SRR4302542.7009605/94‑1 (MQ=60)
AAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGC > SRR4302542.771143/1‑94 (MQ=60)
AAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGC < SRR4302542.674793/94‑1 (MQ=60)
AAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGC < SRR4302542.6650719/94‑1 (MQ=60)
AAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCAC > SRR4302542.3724731/1‑94 (MQ=60)
AATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACT > SRR4302542.5095459/1‑94 (MQ=60)
ATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTG < SRR4302542.6803404/94‑1 (MQ=60)
ATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTG > SRR4302542.1176257/1‑94 (MQ=60)
CGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCG > SRR4302542.526310/1‑94 (MQ=60)
CGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCG > SRR4302542.6171471/1‑94 (MQ=60)
CGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCG > SRR4302542.681269/1‑94 (MQ=60)
TATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAG < SRR4302542.4084465/94‑1 (MQ=60)
ATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGC > SRR4302542.3638410/1‑94 (MQ=60)
TCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCA < SRR4302542.3458548/94‑1 (MQ=60)
CGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAA > SRR4302542.5275568/1‑94 (MQ=60)
GCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAAC < SRR4302542.5255703/94‑1 (MQ=60)
GCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAAC > SRR4302542.4666269/1‑94 (MQ=60)
CTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACT > SRR4302542.3143205/1‑94 (MQ=60)
TACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTG < SRR4302542.1249570/94‑1 (MQ=60)
TACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTG < SRR4302542.3391392/94‑1 (MQ=60)
TACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTG > SRR4302542.5722812/1‑94 (MQ=60)
TACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTG > SRR4302542.3299490/1‑94 (MQ=60)
ACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGC < SRR4302542.5748721/94‑1 (MQ=60)
ACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGC > SRR4302542.4062940/1‑94 (MQ=60)
CCTACAAAGAAGCCAGCTGGAAGCCTTATATCACCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCT < SRR4302542.5267166/94‑1 (MQ=60)
CTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTG > SRR4302542.1725824/1‑94 (MQ=60)
CTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTG > SRR4302542.5557062/1‑94 (MQ=60)
CTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTG > SRR4302542.4786265/1‑94 (MQ=60)
TACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGA > SRR4302542.3082595/1‑94 (MQ=60)
TACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGA > SRR4302542.6122687/1‑94 (MQ=60)
ACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAA > SRR4302542.7596643/1‑94 (MQ=60)
ACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAA > SRR4302542.720392/1‑94 (MQ=60)
CAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAA > SRR4302542.1238791/1‑94 (MQ=60)
CAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAA < SRR4302542.774269/94‑1 (MQ=60)
AAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAG > SRR4302542.565321/1‑94 (MQ=60)
AAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAG > SRR4302542.3573642/1‑94 (MQ=60)
AAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAG > SRR4302542.1531850/1‑94 (MQ=60)
AAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAG > SRR4302542.7555399/1‑94 (MQ=60)
AAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAG < SRR4302542.6356644/94‑1 (MQ=60)
AGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAA > SRR4302542.103953/1‑94 (MQ=60)
AGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAA < SRR4302542.2731164/94‑1 (MQ=60)
AGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAA < SRR4302542.2942480/94‑1 (MQ=60)
GAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAG < SRR4302542.6740222/94‑1 (MQ=60)
GAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAG < SRR4302542.3377589/94‑1 (MQ=60)
GAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAG > SRR4302542.4148809/1‑94 (MQ=60)
GAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAG < SRR4302542.3642427/94‑1 (MQ=60)
AAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGC > SRR4302542.5324324/1‑94 (MQ=60)
AGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCG > SRR4302542.6235753/1‑94 (MQ=60)
AGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCG < SRR4302542.918222/94‑1 (MQ=60)
GCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGC > SRR4302542.3282787/1‑94 (MQ=60)
CCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCA < SRR4302542.3443461/94‑1 (MQ=60)
CCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCA < SRR4302542.2374441/94‑1 (MQ=60)
CCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCA > SRR4302542.6700407/1‑94 (MQ=60)
CCAGCTGGAAGCCTTATAACATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCA > SRR4302542.6695302/1‑94 (MQ=60)
AGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAG > SRR4302542.4341080/1‑94 (MQ=60)
AGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAG < SRR4302542.3939127/94‑1 (MQ=60)
GCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGA < SRR4302542.2526408/94‑1 (MQ=60)
TGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAGTACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAC < SRR4302542.6243757/94‑1 (MQ=60)
TGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAC < SRR4302542.6243764/94‑1 (MQ=60)
GGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACG < SRR4302542.4392657/94‑1 (MQ=60)
GGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACG > SRR4302542.1275542/1‑94 (MQ=60)
GGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACG < SRR4302542.3148341/94‑1 (MQ=60)
AAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCG > SRR4302542.5365458/1‑94 (MQ=60)
AAGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCG < SRR4302542.294823/94‑1 (MQ=60)
AGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGT > SRR4302542.6753400/1‑94 (MQ=60)
AGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGT > SRR4302542.509410/1‑94 (MQ=60)
AGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGT > SRR4302542.6477826/1‑94 (MQ=60)
AGCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGT > SRR4302542.881849/1‑94 (MQ=60)
GCCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTG < SRR4302542.1809808/94‑1 (MQ=60)
CCTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGA > SRR4302542.5143006/1‑94 (MQ=60)
CTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAA > SRR4302542.1153610/1‑94 (MQ=60)
CTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAA > SRR4302542.6339207/1‑94 (MQ=60)
CTTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAA > SRR4302542.6305990/1‑94 (MQ=60)
TTATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAA > SRR4302542.3284937/1‑94 (MQ=60)
TATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAAT > SRR4302542.6366872/1‑94 (MQ=60)
TATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAAT > SRR4302542.2579951/1‑94 (MQ=60)
TATATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAAT < SRR4302542.220640/94‑1 (MQ=60)
ATATCATCGCCGCGATCATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATA < SRR4302542.2424460/94‑1 (MQ=60)
TATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAA > SRR4302542.2173498/1‑94 (MQ=60)
TATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAA < SRR4302542.833961/94‑1 (MQ=60)
ATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAC < SRR4302542.5634640/94‑1 (MQ=60)
ATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAC > SRR4302542.7305811/1‑94 (MQ=60)
ATCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAC < SRR4302542.2065622/94‑1 (MQ=60)
TCATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACC < SRR4302542.6399247/94‑1 (MQ=60)
CATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCC < SRR4302542.1994642/94‑1 (MQ=60)
ATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCC < SRR4302542.4121999/94‑1 (MQ=60)
ATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCC > SRR4302542.4376032/1‑94 (MQ=60)
ATCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCC < SRR4302542.6789632/94‑1 (MQ=60)
TCGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCT > SRR4302542.4216215/1‑94 (MQ=60)
CGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTC < SRR4302542.660792/94‑1 (MQ=60)
CGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTC < SRR4302542.2070197/94‑1 (MQ=60)
CGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTC > SRR4302542.5301334/1‑94 (MQ=60)
CGCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTC > SRR4302542.5086078/1‑94 (MQ=60)
GCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCG < SRR4302542.163058/94‑1 (MQ=60)
GCCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCG > SRR4302542.1060925/1‑94 (MQ=60)
CCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGG < SRR4302542.5269897/94‑1 (MQ=60)
CCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGG < SRR4302542.1381966/94‑1 (MQ=60)
CCGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGG < SRR4302542.2904783/94‑1 (MQ=60)
CGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGG < SRR4302542.748355/94‑1 (MQ=60)
CGCGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGG < SRR4302542.2586697/94‑1 (MQ=60)
CGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCC > SRR4302542.2773681/1‑94 (MQ=60)
CGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCC > SRR4302542.3586933/1‑94 (MQ=60)
CGATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCC > SRR4302542.3302859/1‑94 (MQ=60)
GATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCG > SRR4302542.7474948/1‑94 (MQ=60)
GATGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCG > SRR4302542.3972809/1‑94 (MQ=60)
TGATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGAT > SRR4302542.3156313/1‑94 (MQ=60)
GATCCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATC < SRR4302542.6110754/94‑1 (MQ=60)
atcCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGcgccgctcc > SRR4302542.3211365/4‑85 (MQ=60)
tcCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAG > SRR4302542.7386624/3‑94 (MQ=60)
tcCTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAG < SRR4302542.1153081/92‑1 (MQ=60)
C‑CTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGC > SRR4302542.7022931/1‑94 (MQ=60)
C‑CTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGC > SRR4302542.4571159/1‑94 (MQ=60)
CTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGCT > SRR4302542.7050997/1‑94 (MQ=60)
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AGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑CTGTCCC‑GTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGCT > NC_000913/3005306‑3005492
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
