Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,014,968 G→A M296I (ATG→ATA b2878 → putative oxidoreductase Fe‑S subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,014,9680GA87.0% 921.0 / 88.5 324M296I (ATG→ATAb2878putative oxidoreductase Fe‑S subunit
Reads supporting (aligned to +/- strand):  ref base G (25/17);  new base A (139/143);  total (164/160)
Fisher's exact test for biased strand distribution p-value = 2.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.81e-03

Only 100 of 324 total aligned reads displayed.

TGAGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGG  >  NC_000913/3014878‑3015057
                                                                                          |                                                                                         
tGAGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACt                                                                                         <  2:5280429/93‑1 (MQ=255)
 gagaTCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTg                                                                                        >  1:5552990/1‑93 (MQ=255)
 gagaTCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTg                                                                                        <  2:3600427/93‑1 (MQ=255)
 gagaTCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTg                                                                                        <  1:5288336/93‑1 (MQ=255)
   gaTCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGa                                                                                      >  1:607889/1‑93 (MQ=255)
    aTCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGaa                                                                                     <  1:672191/93‑1 (MQ=255)
     tcttCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAAc                                                                                    <  1:2505365/90‑1 (MQ=255)
     tCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAAc                                                                                    >  2:950700/1‑93 (MQ=255)
     tCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAAc                                                                                    >  2:4623115/1‑93 (MQ=255)
     tCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAAc                                                                                    <  1:1520724/93‑1 (MQ=255)
     tCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAAc                                                                                    >  2:5773422/1‑93 (MQ=255)
      ccTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACg                                                                                   >  2:436925/1‑93 (MQ=255)
       cTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGc                                                                                  >  1:6909416/1‑93 (MQ=255)
        tCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGcc                                                                                 >  2:6357647/1‑93 (MQ=255)
         cGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCt                                                                                <  2:3431551/93‑1 (MQ=255)
           aTGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGa                                                                              <  2:6080675/93‑1 (MQ=255)
           aTGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGa                                                                              >  1:7017742/1‑93 (MQ=255)
           aTGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGa                                                                              <  2:127131/93‑1 (MQ=255)
            tGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGAt                                                                             <  2:304049/93‑1 (MQ=255)
            tGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGAt                                                                             <  1:559736/93‑1 (MQ=255)
            tGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGAt                                                                             <  1:5814656/93‑1 (MQ=255)
            tGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGAt                                                                             <  1:5691833/93‑1 (MQ=255)
             gTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATg                                                                            <  1:323237/93‑1 (MQ=255)
              tCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATgg                                                                           >  2:4095579/1‑93 (MQ=255)
                tGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCa                                                                         >  2:2805610/1‑93 (MQ=255)
                tGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCa                                                                         <  1:2311421/93‑1 (MQ=255)
                  cGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACt                                                                       <  1:2987953/93‑1 (MQ=255)
                    gTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTgg                                                                     >  1:3985966/1‑93 (MQ=255)
                       tCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCaa                                                                  >  1:2922073/1‑93 (MQ=255)
                       tCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCaa                                                                  >  2:5313769/1‑93 (MQ=255)
                         ggTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCaaaa                                                                <  1:1899950/93‑1 (MQ=255)
                         ggTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCaaaa                                                                <  1:3120542/93‑1 (MQ=255)
                          gTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAg                                                               >  1:3549382/1‑93 (MQ=255)
                          gTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAg                                                               >  2:6833062/1‑93 (MQ=255)
                           ttACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGa                                                              >  1:1093631/1‑93 (MQ=255)
                           ttACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGa                                                              <  2:4785399/93‑1 (MQ=255)
                            tACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGaa                                                             >  1:5945557/1‑93 (MQ=255)
                              cATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGaaaa                                                           >  2:6892087/1‑93 (MQ=255)
                              cATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGaaaa                                                           <  1:3337160/93‑1 (MQ=255)
                              cATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGaaaa                                                           >  1:4830952/1‑93 (MQ=255)
                               aTAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGaaaaa                                                          <  1:4357876/93‑1 (MQ=255)
                                tAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAAt                                                         >  1:5467953/1‑93 (MQ=255)
                                   gCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCAc                                                      >  2:7456066/1‑93 (MQ=255)
                                     ttAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTc                                                    >  2:5422496/1‑93 (MQ=255)
                                     ttAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTc                                                    >  2:1516646/1‑93 (MQ=255)
                                     ttAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTc                                                    <  1:1403085/93‑1 (MQ=255)
                                     ttAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTc                                                    <  2:6230588/93‑1 (MQ=255)
                                     ttAAAAGAAGAGTCATTTGATCACGACCTAAAGCTGACGCAAGCACTGGAAATACTGAAACGCCTGATGGCACTGGCAAAAGAAAAATCACTc                                                    >  1:2139963/1‑93 (MQ=255)
                                       aaaaGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCgg                                                  >  2:5126423/1‑93 (MQ=255)
                                       aaaaGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCgg                                                  <  1:1255455/93‑1 (MQ=255)
                                       aaaaGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCgg                                                  >  1:1613476/1‑93 (MQ=255)
                                       aaaaGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCgg                                                  >  1:3506434/1‑93 (MQ=255)
                                        aaaGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGc                                                 >  1:1000755/1‑93 (MQ=255)
                                          agaagaGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCtt                                               <  2:5072907/93‑1 (MQ=255)
                                           gaagaGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCttt                                              <  1:7160086/93‑1 (MQ=255)
                                           gaagaGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCttt                                              <  2:5584351/93‑1 (MQ=255)
                                            aagaGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTg                                             <  1:2713555/93‑1 (MQ=255)
                                            aagaGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTg                                             <  2:4288502/93‑1 (MQ=255)
                                             agagTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTgg                                            <  2:3144863/93‑1 (MQ=255)
                                                  cATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTaa                                       >  1:2637967/1‑93 (MQ=255)
                                                  cATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTaa                                       <  2:5115420/93‑1 (MQ=255)
                                                  cATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTaa                                       <  2:3808455/93‑1 (MQ=255)
                                                     ttGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAAc                                    >  2:7233505/1‑93 (MQ=255)
                                                       gATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTg                                  >  1:6589146/1‑93 (MQ=255)
                                                        aTCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGa                                 <  1:3566917/93‑1 (MQ=255)
                                                         tCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGAc                                >  1:1653833/1‑93 (MQ=255)
                                                          cACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACt                               <  2:5663712/93‑1 (MQ=255)
                                                          cACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACt                               >  1:6461439/1‑93 (MQ=255)
                                                            cGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTaa                             >  2:3911258/1‑93 (MQ=255)
                                                             gACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAac                            <  1:2455425/93‑1 (MQ=255)
                                                              aCCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAaca                           >  2:2312026/1‑93 (MQ=255)
                                                               ccTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAacac                          >  1:5206732/1‑93 (MQ=255)
                                                               ccTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAacac                          <  2:7045923/93‑1 (MQ=255)
                                                                 tCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACActc                        <  2:3686788/93‑1 (MQ=255)
                                                                 tCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACActc                        >  2:190232/1‑93 (MQ=255)
                                                                  cAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACActct                       >  2:3320154/1‑93 (MQ=255)
                                                                   aaGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACtctc                      <  2:874513/93‑1 (MQ=255)
                                                                   aaGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACtctc                      <  1:948801/93‑1 (MQ=255)
                                                                   aaGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACtctc                      <  2:5548259/93‑1 (MQ=255)
                                                                    aGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCg                     <  1:1141971/93‑1 (MQ=255)
                                                                     gCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCgg                    >  1:7278606/1‑93 (MQ=255)
                                                                      cTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGc                   >  1:7422006/1‑93 (MQ=255)
                                                                      cTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGc                   <  2:1761078/93‑1 (MQ=255)
                                                                        gACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCAc                 >  1:1228304/1‑93 (MQ=255)
                                                                          cGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCa               <  1:4168929/93‑1 (MQ=255)
                                                                            cAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATc             >  1:4393468/1‑93 (MQ=255)
                                                                            cAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATc             <  2:144337/93‑1 (MQ=255)
                                                                            cAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATc             <  1:1987326/93‑1 (MQ=255)
                                                                             aaGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATca            >  2:6727578/1‑93 (MQ=255)
                                                                              aGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATcaa           >  1:5140421/1‑93 (MQ=255)
                                                                               gCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATcaac          <  1:7510787/93‑1 (MQ=255)
                                                                                 aCTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATcaacaa        >  2:3231640/1‑93 (MQ=255)
                                                                                 aCTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATcaacaa        >  1:830983/1‑93 (MQ=255)
                                                                                  cTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAAt       >  2:540608/1‑93 (MQ=255)
                                                                                  cTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAAt       >  1:4603576/1‑93 (MQ=255)
                                                                                   tGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATa      >  2:5952951/1‑93 (MQ=255)
                                                                                   tGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATa      >  1:3832520/1‑93 (MQ=255)
                                                                                   tGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATa      >  2:4987717/1‑93 (MQ=255)
                                                                                    ggAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATaa     >  2:2520610/1‑93 (MQ=255)
                                                                                      aaaTACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAg   <  1:6273179/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGAGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGG  >  NC_000913/3014878‑3015057

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TCGTGAGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCA  >  NC_000913/3014875‑3015061
                                                                                             |                                                                                             
TCGTGAGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATA                                                                                               <  SRR4302542.4197550/94‑1 (MQ=60)
 CGTGAGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATAC                                                                                              >  SRR4302542.639478/1‑94 (MQ=60)
   TGAGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTG                                                                                            >  SRR4302542.5606946/1‑94 (MQ=60)
    GAGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGG                                                                                           <  SRR4302542.1073297/94‑1 (MQ=60)
    GAGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGG                                                                                           <  SRR4302542.5339742/94‑1 (MQ=60)
     AGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGA                                                                                          >  SRR4302542.613118/1‑94 (MQ=60)
     AGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGA                                                                                          <  SRR4302542.5529527/94‑1 (MQ=60)
     AGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGA                                                                                          >  SRR4302542.4251360/1‑94 (MQ=60)
     AGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGA                                                                                          >  SRR4302542.3306644/1‑94 (MQ=60)
     AGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGA                                                                                          >  SRR4302542.7398546/1‑94 (MQ=60)
     AGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGA                                                                                          >  SRR4302542.7555960/1‑94 (MQ=60)
     AGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGA                                                                                          <  SRR4302542.1129144/94‑1 (MQ=60)
     AGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGA                                                                                          >  SRR4302542.5348972/1‑94 (MQ=60)
       ATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAAC                                                                                        <  SRR4302542.5343039/94‑1 (MQ=60)
       ATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAAC                                                                                        <  SRR4302542.6077432/94‑1 (MQ=60)
       ATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAAC                                                                                        <  SRR4302542.4555361/94‑1 (MQ=60)
       ATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAAC                                                                                        <  SRR4302542.1461901/94‑1 (MQ=60)
       ATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAAC                                                                                        <  SRR4302542.677990/94‑1 (MQ=60)
        TCTTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACG                                                                                       <  SRR4302542.2529685/94‑1 (MQ=60)
        TCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACG                                                                                       <  SRR4302542.1533857/94‑1 (MQ=60)
        TCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACG                                                                                       >  SRR4302542.1138336/1‑94 (MQ=60)
         CCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGC                                                                                      >  SRR4302542.6977249/1‑94 (MQ=60)
          CTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCC                                                                                     >  SRR4302542.4400925/1‑94 (MQ=60)
          CTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCC                                                                                     <  SRR4302542.239168/94‑1 (MQ=60)
          CTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCC                                                                                     >  SRR4302542.626159/1‑94 (MQ=60)
           TCNNNGTCTGCGNNNTCGGTTACANNGGCTNAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCT                                                                                    >  SRR4302542.7513184/1‑94 (MQ=60)
           TCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCT                                                                                    <  SRR4302542.5191631/94‑1 (MQ=60)
            TGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTG                                                                                   >  SRR4302542.2520786/1‑94 (MQ=60)
            CGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTG                                                                                   >  SRR4302542.2955963/1‑94 (MQ=60)
             GATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGA                                                                                  >  SRR4302542.7086706/1‑94 (MQ=60)
             GATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGA                                                                                  >  SRR4302542.1343186/1‑94 (MQ=60)
             GATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGA                                                                                  >  SRR4302542.7086707/1‑94 (MQ=60)
             GATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGA                                                                                  >  SRR4302542.2715636/1‑94 (MQ=60)
             GATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGGCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGA                                                                                  >  SRR4302542.3686199/1‑94 (MQ=60)
              ATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGAT                                                                                 <  SRR4302542.1260011/94‑1 (MQ=60)
               TGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATG                                                                                <  SRR4302542.5747105/94‑1 (MQ=60)
               TGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATG                                                                                <  SRR4302542.5871081/94‑1 (MQ=60)
               TGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATG                                                                                <  SRR4302542.564555/94‑1 (MQ=60)
                GTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGG                                                                               <  SRR4302542.326046/94‑1 (MQ=60)
                GTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGG                                                                               <  SRR4302542.1230643/94‑1 (MQ=60)
                GTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGG                                                                               <  SRR4302542.3592366/94‑1 (MQ=60)
                 TCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGC                                                                              <  SRR4302542.1823706/94‑1 (MQ=60)
                 TCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGC                                                                              >  SRR4302542.6680872/1‑94 (MQ=60)
                 TCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGC                                                                              <  SRR4302542.1266214/94‑1 (MQ=60)
                  CTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCA                                                                             >  SRR4302542.987922/1‑94 (MQ=60)
                  CTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCA                                                                             >  SRR4302542.2111489/1‑94 (MQ=60)
                   TGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCAC                                                                            <  SRR4302542.5308241/94‑1 (MQ=60)
                   TGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCAC                                                                            >  SRR4302542.2479249/1‑94 (MQ=60)
                   TGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCAC                                                                            <  SRR4302542.2331269/94‑1 (MQ=60)
                    GCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACT                                                                           <  SRR4302542.5635288/94‑1 (MQ=60)
                    GCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACT                                                                           <  SRR4302542.1617347/94‑1 (MQ=60)
                    GCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACT                                                                           <  SRR4302542.2726171/94‑1 (MQ=60)
                    GCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACT                                                                           <  SRR4302542.2814650/94‑1 (MQ=60)
                     CGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTG                                                                          <  SRR4302542.3016559/94‑1 (MQ=60)
                      GGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGG                                                                         <  SRR4302542.5657621/94‑1 (MQ=60)
                      GGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGG                                                                         >  SRR4302542.4025286/1‑94 (MQ=60)
                      GGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGG                                                                         >  SRR4302542.1906341/1‑94 (MQ=60)
                      GGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGG                                                                         >  SRR4302542.6051729/1‑94 (MQ=60)
                       GTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGC                                                                        <  SRR4302542.2878297/94‑1 (MQ=60)
                       GTTTCGGTTACATAGGCTCAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGC                                                                        >  SRR4302542.2273576/1‑94 (MQ=60)
                        TTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCA                                                                       <  SRR4302542.3458595/94‑1 (MQ=60)
                         TTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAA                                                                      <  SRR4302542.5889110/94‑1 (MQ=60)
                         TTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAA                                                                      >  SRR4302542.2950075/1‑94 (MQ=60)
                           CGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAA                                                                    >  SRR4302542.5284193/1‑94 (MQ=60)
                            GGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAG                                                                   <  SRR4302542.3150224/94‑1 (MQ=60)
                            GGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAG                                                                   <  SRR4302542.1916381/94‑1 (MQ=60)
                            GGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAG                                                                   <  SRR4302542.6889622/94‑1 (MQ=60)
                            GGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAG                                                                   >  SRR4302542.3582564/1‑94 (MQ=60)
                             GTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGA                                                                  >  SRR4302542.1103001/1‑94 (MQ=60)
                              TTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAA                                                                 >  SRR4302542.6003148/1‑94 (MQ=60)
                               TACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAA                                                                >  SRR4302542.4736344/1‑94 (MQ=60)
                                ACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAA                                                               >  SRR4302542.4878017/1‑94 (MQ=60)
                                ACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAA                                                               >  SRR4302542.3321005/1‑94 (MQ=60)
                                ACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAA                                                               <  SRR4302542.933173/94‑1 (MQ=60)
                                 CATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAA                                                              <  SRR4302542.6619701/94‑1 (MQ=60)
                                 CATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAA                                                              <  SRR4302542.3368567/94‑1 (MQ=60)
                                  ATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAAT                                                             >  SRR4302542.5521068/1‑94 (MQ=60)
                                  ATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAAT                                                             >  SRR4302542.4100237/1‑94 (MQ=60)
                                  ATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAAT                                                             <  SRR4302542.4400675/94‑1 (MQ=60)
                                  ATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAAT                                                             >  SRR4302542.1804882/1‑94 (MQ=60)
                                   TAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATC                                                            <  SRR4302542.1920874/94‑1 (MQ=60)
                                    AGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCA                                                           >  SRR4302542.6670531/1‑94 (MQ=60)
                                    AGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCA                                                           >  SRR4302542.1052867/1‑94 (MQ=60)
                                    AGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCA                                                           <  SRR4302542.2052863/94‑1 (MQ=60)
                                     GGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCAC                                                          <  SRR4302542.1927465/94‑1 (MQ=60)
                                      GCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACT                                                         <  SRR4302542.153711/94‑1 (MQ=60)
                                      GCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACT                                                         <  SRR4302542.6439926/94‑1 (MQ=60)
                                       CTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTC                                                        >  SRR4302542.5716301/1‑94 (MQ=60)
                                       CTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTC                                                        >  SRR4302542.7434089/1‑94 (MQ=60)
                                       CTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTC                                                        <  SRR4302542.1192445/94‑1 (MQ=60)
                                       CTTAAAAGAAGAGTCATTTGATCACGACCTAAAGCTGACGCAAGCACTGGAAATACTGAAACGCCTGATGGCACTGGCAAAAGAAAAATCACTC                                                        >  SRR4302542.2158428/1‑94 (MQ=60)
                                        TTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCG                                                       <  SRR4302542.831089/94‑1 (MQ=60)
                                        TTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCG                                                       <  SRR4302542.1415213/94‑1 (MQ=60)
                                        TTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCG                                                       <  SRR4302542.2272230/94‑1 (MQ=60)
                                         TAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGG                                                      >  SRR4302542.1627415/1‑94 (MQ=60)
                                         TAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGG                                                      >  SRR4302542.3539229/1‑94 (MQ=60)
                                         TAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAACACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGG                                                      <  SRR4302542.7212303/94‑1 (MQ=60)
                                          AAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGC                                                     >  SRR4302542.3230620/1‑94 (MQ=60)
                                          AAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGC                                                     >  SRR4302542.1009365/1‑94 (MQ=60)
                                          AAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGC                                                     >  SRR4302542.1276364/1‑94 (MQ=60)
                                          AAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGC                                                     >  SRR4302542.6139255/1‑94 (MQ=60)
                                          AAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGC                                                     <  SRR4302542.1266254/94‑1 (MQ=60)
                                           AAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCT                                                    >  SRR4302542.3943789/1‑94 (MQ=60)
                                           AAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCA                                                    <  SRR4302542.1431425/94‑1 (MQ=60)
                                            AAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTT                                                   <  SRR4302542.2624252/94‑1 (MQ=60)
                                            AAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTT                                                   >  SRR4302542.338831/1‑94 (MQ=60)
                                             AGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTT                                                  <  SRR4302542.7004279/94‑1 (MQ=60)
                                              GAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTG                                                 <  SRR4302542.7230320/94‑1 (MQ=60)
                                               AAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGG                                                <  SRR4302542.2739726/94‑1 (MQ=60)
                                               AAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGG                                                <  SRR4302542.820078/94‑1 (MQ=60)
                                               AAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGG                                                >  SRR4302542.4987254/1‑94 (MQ=60)
                                               AAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGG                                                <  SRR4302542.1657267/94‑1 (MQ=60)
                                                AGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGC                                               <  SRR4302542.4427858/94‑1 (MQ=60)
                                                 GAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCG                                              <  SRR4302542.3577910/94‑1 (MQ=60)
                                                 GAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCG                                              <  SRR4302542.945976/94‑1 (MQ=60)
                                                 GAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCG                                              <  SRR4302542.7468531/94‑1 (MQ=60)
                                                 GAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCG                                              <  SRR4302542.4149819/94‑1 (MQ=60)
                                                    TCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAA                                           >  SRR4302542.2663449/1‑94 (MQ=60)
                                                    TCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAA                                           >  SRR4302542.6871369/1‑94 (MQ=60)
                                                     CATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAA                                          <  SRR4302542.5587115/94‑1 (MQ=60)
                                                      ATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAA                                         >  SRR4302542.1627928/1‑94 (MQ=60)
                                                      ATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAA                                         <  SRR4302542.3069434/94‑1 (MQ=60)
                                                      ATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAA                                         >  SRR4302542.7267252/1‑94 (MQ=60)
                                                       TTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAAC                                        <  SRR4302542.3575224/94‑1 (MQ=60)
                                                        TTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACT                                       >  SRR4302542.3077715/1‑94 (MQ=60)
                                                        TTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACT                                       <  SRR4302542.327360/94‑1 (MQ=60)
                                                         TGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTG                                      <  SRR4302542.6380079/94‑1 (MQ=60)
                                                         TGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTG                                      >  SRR4302542.6654070/1‑94 (MQ=60)
                                                         TGATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTG                                      <  SRR4302542.4452265/94‑1 (MQ=60)
                                                           ATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGAC                                    >  SRR4302542.2961260/1‑94 (MQ=60)
                                                           ATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGAC                                    <  SRR4302542.3600215/94‑1 (MQ=60)
                                                           ATCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGAC                                    >  SRR4302542.1668118/1‑94 (MQ=60)
                                                            TCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACT                                   >  SRR4302542.7125256/1‑94 (MQ=60)
                                                            TCACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACT                                   >  SRR4302542.6525103/1‑94 (MQ=60)
                                                             CACGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTA                                  <  SRR4302542.5296750/94‑1 (MQ=60)
                                                               CGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCGCTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAAC                                <  SRR4302542.4733632/94‑1 (MQ=60)
                                                               CGACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAAC                                <  SRR4302542.6901332/94‑1 (MQ=60)
                                                                GACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACA                               <  SRR4302542.2479295/94‑1 (MQ=60)
                                                                 ACCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACAC                              >  SRR4302542.5257368/1‑94 (MQ=60)
                                                                  CCTCAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACT                             >  SRR4302542.3949634/1‑94 (MQ=60)
                                                                     CAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTC                          >  SRR4302542.5865833/1‑94 (MQ=60)
                                                                     CAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTC                          >  SRR4302542.3690490/1‑94 (MQ=60)
                                                                     CAAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTC                          <  SRR4302542.3867404/94‑1 (MQ=60)
                                                                      AAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCG                         <  SRR4302542.956955/94‑1 (MQ=60)
                                                                      AAGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCG                         <  SRR4302542.6301300/94‑1 (MQ=60)
                                                                       AGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGG                        <  SRR4302542.7501962/94‑1 (MQ=60)
                                                                       AGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGG                        >  SRR4302542.7349989/1‑94 (MQ=60)
                                                                       AGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGG                        >  SRR4302542.7349988/1‑94 (MQ=60)
                                                                       AGCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGG                        <  SRR4302542.1151750/94‑1 (MQ=60)
                                                                        GCTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGC                       >  SRR4302542.7494629/1‑94 (MQ=60)
                                                                         CTGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCA                      <  SRR4302542.2492610/94‑1 (MQ=60)
                                                                          TGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCAC                     >  SRR4302542.5754694/1‑94 (MQ=60)
                                                                          TGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCAC                     >  SRR4302542.1238866/1‑94 (MQ=60)
                                                                          TGACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCAC                     >  SRR4302542.6541323/1‑94 (MQ=60)
                                                                           GACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACC                    >  SRR4302542.2814092/1‑94 (MQ=60)
                                                                           GACGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACC                    >  SRR4302542.4997000/1‑94 (MQ=60)
                                                                             CGCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCAT                  <  SRR4302542.4210047/94‑1 (MQ=60)
                                                                              GCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATC                 >  SRR4302542.4436572/1‑94 (MQ=60)
                                                                              GCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATC                 >  SRR4302542.5649707/1‑94 (MQ=60)
                                                                              GCAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATC                 <  SRR4302542.5196251/94‑1 (MQ=60)
                                                                               CAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCA                >  SRR4302542.4392669/1‑94 (MQ=60)
                                                                               CAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCA                <  SRR4302542.4463365/94‑1 (MQ=60)
                                                                               CAAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCA                <  SRR4302542.2004469/94‑1 (MQ=60)
                                                                                AAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAACAATCACTCGCCGTTGGCGTAAAACTGAATAACACTCTCGGCACCATCGA               >  SRR4302542.2645835/1‑94 (MQ=60)
                                                                                AAGCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAA               >  SRR4302542.5190383/1‑94 (MQ=60)
                                                                                  GCACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACA             <  SRR4302542.7584653/94‑1 (MQ=60)
                                                                                   CACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAA            >  SRR4302542.838163/1‑94 (MQ=60)
                                                                                    ACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAAT           <  SRR4302542.1396930/94‑1 (MQ=60)
                                                                                    ACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAAT           >  SRR4302542.4648568/1‑94 (MQ=60)
                                                                                    ACTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAAT           <  SRR4302542.2413519/94‑1 (MQ=60)
                                                                                     CTGGAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATA          >  SRR4302542.3870425/1‑94 (MQ=60)
                                                                                       GGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAA        >  SRR4302542.5967180/1‑94 (MQ=60)
                                                                                        GAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAG       <  SRR4302542.5734185/94‑1 (MQ=60)
                                                                                        GAAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAG       <  SRR4302542.3240726/94‑1 (MQ=60)
                                                                                         AAATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGG      <  SRR4302542.6335012/94‑1 (MQ=60)
                                                                                          AATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGC     <  SRR4302542.3590140/94‑1 (MQ=60)
                                                                                           ATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCG    >  SRR4302542.7026102/1‑94 (MQ=60)
                                                                                           ATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCG    <  SRR4302542.229736/94‑1 (MQ=60)
                                                                                           ATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCG    <  SRR4302542.2319754/94‑1 (MQ=60)
                                                                                           ATACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCG    <  SRR4302542.3024598/94‑1 (MQ=60)
                                                                                             ACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCA  <  SRR4302542.88491/94‑1 (MQ=60)
                                                                                             ACTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCA  >  SRR4302542.4836120/1‑94 (MQ=60)
                                                                                             |                                                                                             
TCGTGAGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCA  >  NC_000913/3014875‑3015061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: