Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,085,060 G→A P112P (CCG→CCA)  metK → methionine adenosyltransferase 1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,085,0600GA83.8% 890.9 / 119.4 339P112P (CCG→CCA) metKmethionine adenosyltransferase 1
Reads supporting (aligned to +/- strand):  ref base G (26/29);  new base A (145/139);  total (171/168)
Fisher's exact test for biased strand distribution p-value = 6.60e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.71e-01

Only 100 of 341 total aligned reads displayed.

GACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCA  >  NC_000913/3084968‑3085150
                                                                                            |                                                                                          
  cATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACt                                                                                          >  1:418786/1‑93 (MQ=255)
  cATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACt                                                                                          <  1:7208683/93‑1 (MQ=255)
  cATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACt                                                                                          >  1:2382428/1‑93 (MQ=255)
   aTGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTg                                                                                         >  1:2281215/1‑93 (MQ=255)
    tGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACTAGGGCGTTGACCGTGCCGATCCACTgg                                                                                        >  2:5079740/1‑93 (MQ=255)
    tGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTgg                                                                                        >  1:710745/1‑93 (MQ=255)
    tGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTgg                                                                                        <  1:6272299/93‑1 (MQ=255)
    tGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTgg                                                                                        >  1:6650522/1‑93 (MQ=255)
     gggCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGa                                                                                       >  1:4583992/1‑93 (MQ=255)
       gCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAAc                                                                                     <  2:2208091/93‑1 (MQ=255)
       gCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAAc                                                                                     >  1:4888173/1‑93 (MQ=255)
       gCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAAc                                                                                     >  1:7039403/1‑93 (MQ=255)
       gCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAAc                                                                                     >  1:6892865/1‑93 (MQ=255)
        cTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACa                                                                                    <  1:4853913/93‑1 (MQ=255)
        cTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACa                                                                                    <  1:5789554/93‑1 (MQ=255)
         tttGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAg                                                                                   <  2:447143/93‑1 (MQ=255)
           tGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAggg                                                                                 <  1:5025310/93‑1 (MQ=255)
           tGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAggg                                                                                 <  2:2370966/93‑1 (MQ=255)
              cccTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGgcgc                                                                              <  1:1208388/91‑1 (MQ=255)
               gCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGcgcg                                                                             >  1:2740581/1‑93 (MQ=255)
               gCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGcgcg                                                                             >  1:2892083/1‑93 (MQ=255)
               gCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGcgcg                                                                             >  1:2626989/1‑93 (MQ=255)
                 tAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCggg                                                                           <  1:1723616/93‑1 (MQ=255)
                  aaCTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGt                                                                          <  1:5862009/93‑1 (MQ=255)
                  aaCTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGt                                                                          <  1:1019060/93‑1 (MQ=255)
                   aCTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTg                                                                         >  2:5798189/1‑93 (MQ=255)
                        tgtgCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAg                                                                    >  2:7164693/1‑93 (MQ=255)
                        tgtgCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAg                                                                    <  2:3456549/93‑1 (MQ=255)
                         gtgCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAgg                                                                   <  2:3961288/93‑1 (MQ=255)
                          tgCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAggg                                                                  >  2:5475661/1‑93 (MQ=255)
                            cGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTc                                                                <  2:6151923/93‑1 (MQ=255)
                              gTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTg                                                              <  1:865499/93‑1 (MQ=255)
                               ttCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGa                                                             <  2:3677900/93‑1 (MQ=255)
                               ttCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGa                                                             >  2:4816167/1‑93 (MQ=255)
                               ttCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGa                                                             <  1:393427/93‑1 (MQ=255)
                                tCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGAt                                                            <  1:3775513/93‑1 (MQ=255)
                                     gcgcTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTg                                                       <  1:5444114/93‑1 (MQ=255)
                                     gcgcTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTg                                                       <  2:4662857/93‑1 (MQ=255)
                                     gcgcTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTg                                                       <  1:3097675/93‑1 (MQ=255)
                                      cgcTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTgg                                                      <  2:4842842/93‑1 (MQ=255)
                                       gcTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGc                                                     >  2:7270651/1‑93 (MQ=255)
                                        cTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCt                                                    <  1:3165254/93‑1 (MQ=255)
                                          aTCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTAc                                                  <  2:1238234/93‑1 (MQ=255)
                                             ggCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCa                                               >  1:5373563/1‑93 (MQ=255)
                                              gCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCaa                                              <  2:2504675/93‑1 (MQ=255)
                                                aaaCAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACt                                            >  1:6560865/1‑93 (MQ=255)
                                                 aaCAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTa                                           >  2:3739569/1‑93 (MQ=255)
                                                 aaCAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTa                                           >  2:5943872/1‑93 (MQ=255)
                                                   cAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAAt                                         <  2:5277455/93‑1 (MQ=255)
                                                   cAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAAt                                         >  2:1909708/1‑93 (MQ=255)
                                                    aGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATg                                        <  2:7490068/93‑1 (MQ=255)
                                                    aGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATg                                        <  1:2197391/93‑1 (MQ=255)
                                                     gTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGa                                       <  1:4459467/93‑1 (MQ=255)
                                                     gTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGa                                       <  1:1889025/93‑1 (MQ=255)
                                                     gTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGa                                       <  2:1716338/93‑1 (MQ=255)
                                                        tcCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAAc                                    >  2:6345012/1‑93 (MQ=255)
                                                         ccTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAAcc                                   <  1:1335414/93‑1 (MQ=255)
                                                         ccTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAAcc                                   >  1:93693/1‑93 (MQ=255)
                                                           tGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGa                                 >  2:6479078/1‑93 (MQ=255)
                                                           tGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGa                                 <  2:6953601/93‑1 (MQ=255)
                                                            gACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGAc                                >  1:5539577/1‑93 (MQ=255)
                                                             aCATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACg                               >  1:5188489/1‑93 (MQ=255)
                                                              cATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGt                              <  1:359015/93‑1 (MQ=255)
                                                                tCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGc                            <  2:1351538/93‑1 (MQ=255)
                                                                tCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGc                            >  1:6353795/1‑93 (MQ=255)
                                                                tCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGc                            >  2:5036971/1‑93 (MQ=255)
                                                                tCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGc                            >  2:7042403/1‑93 (MQ=255)
                                                                   aCCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGa                         >  1:431368/1‑93 (MQ=255)
                                                                   aCCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGa                         <  2:4742483/93‑1 (MQ=255)
                                                                   aCCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGa                         <  2:682561/93‑1 (MQ=255)
                                                                   aCCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGa                         <  1:207780/93‑1 (MQ=255)
                                                                    ccAGGGCGTTGACCGTGTCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGAt                        >  1:1153794/1‑93 (MQ=255)
                                                                    ccAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGGGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGAt                        >  1:6064902/1‑93 (MQ=255)
                                                                     cAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATg                       <  1:2564000/93‑1 (MQ=255)
                                                                     cAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATg                       >  1:3181177/1‑93 (MQ=255)
                                                                     cAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATg                       >  2:3253810/1‑93 (MQ=255)
                                                                      aGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGc                      >  2:4318883/1‑93 (MQ=255)
                                                                      aGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGc                      <  1:3318296/93‑1 (MQ=255)
                                                                      aGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGc                      >  2:1564191/1‑93 (MQ=255)
                                                                       gggCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGcc                     >  2:381932/1‑93 (MQ=255)
                                                                       gggCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGcc                     >  2:492970/1‑93 (MQ=255)
                                                                         gCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAg                   <  2:7074251/93‑1 (MQ=255)
                                                                         gCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAg                   <  2:6606613/93‑1 (MQ=255)
                                                                           gTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGca                 <  2:2788410/93‑1 (MQ=255)
                                                                           gTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGca                 >  1:6760077/1‑93 (MQ=255)
                                                                            ttGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcac                >  1:151645/1‑93 (MQ=255)
                                                                               aCCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcaccta             <  2:5631007/93‑1 (MQ=255)
                                                                               aCCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcaccta             <  1:735534/93‑1 (MQ=255)
                                                                               aCCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcaccta             >  1:3420700/1‑93 (MQ=255)
                                                                                  gTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatca          <  1:4692010/93‑1 (MQ=255)
                                                                                   tGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcac         >  2:768116/1‑93 (MQ=255)
                                                                                      cGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcaccta      <  2:1753580/93‑1 (MQ=255)
                                                                                      cGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcaccta      <  1:7502071/93‑1 (MQ=255)
                                                                                       gATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcacctat     >  2:3123154/1‑93 (MQ=255)
                                                                                       gATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcacctat     >  2:2003334/1‑93 (MQ=255)
                                                                                       gATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcacctat     >  2:5206481/1‑93 (MQ=255)
                                                                                        aTCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACTCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATg    >  2:2586841/1‑93 (MQ=255)
                                                                                        aTCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATg    >  2:4144470/1‑93 (MQ=255)
                                                                                        aTCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATg    <  2:5665565/93‑1 (MQ=255)
                                                                                          ccGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGca  <  2:1011193/93‑1 (MQ=255)
                                                                                            |                                                                                          
GACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCA  >  NC_000913/3084968‑3085150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACAC  >  NC_000913/3084967‑3085153
                                                                                             |                                                                                             
CGACATGGGCTTTGACGCTATCTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCA                                                                                               <  SRR4302542.1702203/94‑1 (MQ=60)
CGACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCG                                                                                               >  SRR4302542.787429/1‑94 (MQ=60)
CGACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCCCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCA                                                                                               >  SRR4302542.6282155/1‑94 (MQ=60)
 GACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCAC                                                                                              <  SRR4302542.4083082/94‑1 (MQ=60)
 GACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCAC                                                                                              <  SRR4302542.3637998/94‑1 (MQ=60)
 GACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCAC                                                                                              <  SRR4302542.2775581/94‑1 (MQ=60)
  ACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACT                                                                                             >  SRR4302542.422391/1‑94 (MQ=60)
  ACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACT                                                                                             >  SRR4302542.2404284/1‑94 (MQ=60)
  ACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACT                                                                                             <  SRR4302542.4617045/94‑1 (MQ=60)
  ACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACT                                                                                             <  SRR4302542.4791986/94‑1 (MQ=60)
   CATGGGCTTTGACGCTATCTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTG                                                                                            <  SRR4302542.3414951/94‑1 (MQ=60)
   CATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTG                                                                                            >  SRR4302542.5467496/1‑94 (MQ=60)
   CATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTG                                                                                            >  SRR4302542.2300819/1‑94 (MQ=60)
   CATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTG                                                                                            <  SRR4302542.7279426/94‑1 (MQ=60)
    ATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGG                                                                                           <  SRR4302542.2403993/94‑1 (MQ=60)
    ATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGG                                                                                           >  SRR4302542.4910943/1‑94 (MQ=60)
    ATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGG                                                                                           >  SRR4302542.6716060/1‑94 (MQ=60)
    ATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGG                                                                                           >  SRR4302542.716880/1‑94 (MQ=60)
     TGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGA                                                                                          <  SRR4302542.3820268/94‑1 (MQ=60)
     TGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGA                                                                                          <  SRR4302542.6334124/94‑1 (MQ=60)
     TGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGA                                                                                          >  SRR4302542.4628835/1‑94 (MQ=60)
       GGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAAC                                                                                        >  SRR4302542.4935725/1‑94 (MQ=60)
       GGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAAC                                                                                        <  SRR4302542.4490972/94‑1 (MQ=60)
       GGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAAC                                                                                        >  SRR4302542.7108541/1‑94 (MQ=60)
       GGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAAC                                                                                        >  SRR4302542.6960554/1‑94 (MQ=60)
         CTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAG                                                                                      <  SRR4302542.5845761/94‑1 (MQ=60)
         CTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAG                                                                                      <  SRR4302542.4901180/94‑1 (MQ=60)
          TTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGG                                                                                     <  SRR4302542.2781876/94‑1 (MQ=60)
          TTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGG                                                                                     <  SRR4302542.2695365/94‑1 (MQ=60)
            TGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGC                                                                                   <  SRR4302542.7049947/94‑1 (MQ=60)
            TGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGC                                                                                   <  SRR4302542.7571379/94‑1 (MQ=60)
            TGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGC                                                                                   <  SRR4302542.5074090/94‑1 (MQ=60)
             GACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCG                                                                                  <  SRR4302542.5508292/94‑1 (MQ=60)
             GACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCG                                                                                  <  SRR4302542.7135852/94‑1 (MQ=60)
              ACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGC                                                                                 <  SRR4302542.2588960/94‑1 (MQ=60)
               CGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCG                                                                                >  SRR4302542.2767006/1‑94 (MQ=60)
               CGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCG                                                                                >  SRR4302542.2919850/1‑94 (MQ=60)
               CGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCG                                                                                >  SRR4302542.2652369/1‑94 (MQ=60)
               CCCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCG                                                                                <  SRR4302542.1218773/94‑1 (MQ=60)
                GCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGG                                                                               <  SRR4302542.5007141/94‑1 (MQ=60)
                 CTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGG                                                                              >  SRR4302542.4667272/1‑94 (MQ=60)
                  TAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGT                                                                             <  SRR4302542.1486774/94‑1 (MQ=60)
                  TAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGT                                                                             <  SRR4302542.1738577/94‑1 (MQ=60)
                  TAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGT                                                                             <  SRR4302542.1635166/94‑1 (MQ=60)
                  TAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGT                                                                             <  SRR4302542.962122/94‑1 (MQ=60)
                  TAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGG                                                                             >  SRR4302542.2678212/1‑94 (MQ=60)
                   AACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTG                                                                            <  SRR4302542.6406601/94‑1 (MQ=60)
                   AACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTG                                                                            <  SRR4302542.5918852/94‑1 (MQ=60)
                   AACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTG                                                                            <  SRR4302542.1027836/94‑1 (MQ=60)
                   AACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTG                                                                            <  SRR4302542.145123/94‑1 (MQ=60)
                    ACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGCGA                                                                           >  SRR4302542.2712866/1‑94 (MQ=60)
                     CTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGAC                                                                          >  SRR4302542.6710195/1‑94 (MQ=60)
                     CTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGAC                                                                          >  SRR4302542.6032724/1‑94 (MQ=60)
                     CTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGAC                                                                          >  SRR4302542.1702636/1‑94 (MQ=60)
                       CCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCA                                                                        >  SRR4302542.5688292/1‑94 (MQ=60)
                       CCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCA                                                                        >  SRR4302542.2181184/1‑94 (MQ=60)
                       CCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCA                                                                        <  SRR4302542.2550548/94‑1 (MQ=60)
                        CTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAG                                                                       <  SRR4302542.6320295/94‑1 (MQ=60)
                        CTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAG                                                                       >  SRR4302542.597662/1‑94 (MQ=60)
                        CTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAG                                                                       >  SRR4302542.2015438/1‑94 (MQ=60)
                          GTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGG                                                                     >  SRR4302542.5396586/1‑94 (MQ=60)
                          GTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGG                                                                     >  SRR4302542.1881439/1‑94 (MQ=60)
                            GCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTC                                                                   <  SRR4302542.2968492/94‑1 (MQ=60)
                            GCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTC                                                                   <  SRR4302542.2594590/94‑1 (MQ=60)
                            GCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTC                                                                   >  SRR4302542.480060/1‑94 (MQ=60)
                            GCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGGC                                                                   >  SRR4302542.5051365/1‑94 (MQ=60)
                             CGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCT                                                                  <  SRR4302542.1190640/94‑1 (MQ=60)
                             CGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCT                                                                  <  SRR4302542.5221672/94‑1 (MQ=60)
                             CGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCT                                                                  <  SRR4302542.4180801/94‑1 (MQ=60)
                              GGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTG                                                                 >  SRR4302542.2341921/1‑94 (MQ=60)
                               GTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGA                                                                <  SRR4302542.5891442/94‑1 (MQ=60)
                               GTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGA                                                                <  SRR4302542.872956/94‑1 (MQ=60)
                                TTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGAT                                                               <  SRR4302542.7230753/94‑1 (MQ=60)
                                TTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGAT                                                               >  SRR4302542.4928118/1‑94 (MQ=60)
                                TTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGAT                                                               <  SRR4302542.396830/94‑1 (MQ=60)
                                 TCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATG                                                              <  SRR4302542.6816500/94‑1 (MQ=60)
                                 TCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATG                                                              <  SRR4302542.7287310/94‑1 (MQ=60)
                                 TCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATG                                                              <  SRR4302542.73087/94‑1 (MQ=60)
                                 TCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATG                                                              <  SRR4302542.3812859/94‑1 (MQ=60)
                                 TCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATG                                                              >  SRR4302542.938689/1‑94 (MQ=60)
                                  CTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGT                                                             >  SRR4302542.451631/1‑94 (MQ=60)
                                      GCGCTATCGGCAAACAGTCTCCTGCCATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGG                                                         <  SRR4302542.353205/94‑1 (MQ=60)
                                      GCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGG                                                         <  SRR4302542.3195050/94‑1 (MQ=60)
                                      GCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGG                                                         <  SRR4302542.5497001/94‑1 (MQ=60)
                                      GCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGG                                                         <  SRR4302542.1851058/94‑1 (MQ=60)
                                      GCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGG                                                         <  SRR4302542.3127120/94‑1 (MQ=60)
                                       CGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGC                                                        <  SRR4302542.3884515/94‑1 (MQ=60)
                                       CGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGC                                                        >  SRR4302542.2558421/1‑94 (MQ=60)
                                        TCTATCGGCAAACAGTCTCCTGACATCATCCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCT                                                       <  SRR4302542.2335930/94‑1 (MQ=60)
                                         CTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTA                                                      >  SRR4302542.346911/1‑94 (MQ=60)
                                         CTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTA                                                      <  SRR4302542.3195283/94‑1 (MQ=60)
                                         CTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTA                                                      <  SRR4302542.5888743/94‑1 (MQ=60)
                                         CTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTA                                                      >  SRR4302542.6437687/1‑94 (MQ=60)
                                           ATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACG                                                    >  SRR4302542.4615800/1‑94 (MQ=60)
                                             CGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCA                                                  >  SRR4302542.5425776/1‑94 (MQ=60)
                                               GCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAAC                                                >  SRR4302542.7135132/1‑94 (MQ=60)
                                                CAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACT                                               >  SRR4302542.6625531/1‑94 (MQ=60)
                                                 AAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTA                                              >  SRR4302542.62776/1‑94 (MQ=60)
                                                 AAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTA                                              >  SRR4302542.1214523/1‑94 (MQ=60)
                                                 AAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTA                                              >  SRR4302542.3305196/1‑94 (MQ=60)
                                                  AACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAA                                             >  SRR4302542.5370536/1‑94 (MQ=60)
                                                    CAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATG                                           >  SRR4302542.948914/1‑94 (MQ=60)
                                                    CAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATG                                           <  SRR4302542.4301972/94‑1 (MQ=60)
                                                    CAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATG                                           >  SRR4302542.3626765/1‑94 (MQ=60)
                                                     AGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGA                                          >  SRR4302542.5469781/1‑94 (MQ=60)
                                                     AGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGA                                          <  SRR4302542.2216311/94‑1 (MQ=60)
                                                     AGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGA                                          <  SRR4302542.1342171/94‑1 (MQ=60)
                                                      GTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAA                                         <  SRR4302542.3250075/94‑1 (MQ=60)
                                                      GTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAA                                         <  SRR4302542.1905373/94‑1 (MQ=60)
                                                      GTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAA                                         <  SRR4302542.4503213/94‑1 (MQ=60)
                                                        CTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAAC                                       >  SRR4302542.7324642/1‑94 (MQ=60)
                                                        CTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAAC                                       >  SRR4302542.6664729/1‑94 (MQ=60)
                                                        CTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAAC                                       >  SRR4302542.3203172/1‑94 (MQ=60)
                                                        CTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAAC                                       <  SRR4302542.5953376/94‑1 (MQ=60)
                                                         TCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACC                                      <  SRR4302542.3186231/94‑1 (MQ=60)
                                                         TCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACC                                      <  SRR4302542.5720975/94‑1 (MQ=60)
                                                         TCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACC                                      >  SRR4302542.94484/1‑94 (MQ=60)
                                                          CCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCG                                     <  SRR4302542.5389830/94‑1 (MQ=60)
                                                          CCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGTCCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCG                                     >  SRR4302542.3043789/1‑94 (MQ=60)
                                                          CCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCG                                     >  SRR4302542.568897/1‑94 (MQ=60)
                                                          CCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCG                                     <  SRR4302542.6990712/94‑1 (MQ=60)
                                                          CCTGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCG                                     <  SRR4302542.1346913/94‑1 (MQ=60)
                                                            TGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGAC                                   >  SRR4302542.5593424/1‑94 (MQ=60)
                                                            TGACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGAC                                   <  SRR4302542.1994116/94‑1 (MQ=60)
                                                             GACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACG                                  <  SRR4302542.7057210/94‑1 (MQ=60)
                                                             GACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACG                                  >  SRR4302542.5238900/1‑94 (MQ=60)
                                                              ACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGT                                 >  SRR4302542.7240421/1‑94 (MQ=60)
                                                              ACATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGT                                 <  SRR4302542.2105181/94‑1 (MQ=60)
                                                               CATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTG                                >  SRR4302542.3197639/1‑94 (MQ=60)
                                                               CATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTG                                <  SRR4302542.362147/94‑1 (MQ=60)
                                                               CATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTG                                <  SRR4302542.4461800/94‑1 (MQ=60)
                                                                ATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGC                               >  SRR4302542.3030966/1‑94 (MQ=60)
                                                                ATCAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGC                               >  SRR4302542.6416382/1‑94 (MQ=60)
                                                                  CAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTG                             >  SRR4302542.4298138/1‑94 (MQ=60)
                                                                  CAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTG                             >  SRR4302542.6464950/1‑94 (MQ=60)
                                                                  CAACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTG                             <  SRR4302542.798646/94‑1 (MQ=60)
                                                                   AACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGA                            >  SRR4302542.435103/1‑94 (MQ=60)
                                                                   AACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGA                            >  SRR4302542.1640755/1‑94 (MQ=60)
                                                                    ACCAGGGCGTTGACCGTGTCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGAT                           >  SRR4302542.1163683/1‑94 (MQ=60)
                                                                    ACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGAT                           <  SRR4302542.209570/94‑1 (MQ=60)
                                                                    ACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGAT                           >  SRR4302542.6912049/1‑94 (MQ=60)
                                                                    ACCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGGGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGAT                           >  SRR4302542.6123647/1‑94 (MQ=60)
                                                                     CCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATG                          >  SRR4302542.3211320/1‑94 (MQ=60)
                                                                     CCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATG                          >  SRR4302542.3237677/1‑94 (MQ=60)
                                                                     CCAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATG                          >  SRR4302542.21758/1‑94 (MQ=60)
                                                                      CAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGC                         >  SRR4302542.380314/1‑94 (MQ=60)
                                                                      CAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGC                         >  SRR4302542.3572818/1‑94 (MQ=60)
                                                                      CAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGC                         <  SRR4302542.2588855/94‑1 (MQ=60)
                                                                      CAGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGC                         >  SRR4302542.888013/1‑94 (MQ=60)
                                                                       AGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCC                        <  SRR4302542.4749895/94‑1 (MQ=60)
                                                                       AGGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCC                        <  SRR4302542.3349558/94‑1 (MQ=60)
                                                                        GGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCA                       <  SRR4302542.3406446/94‑1 (MQ=60)
                                                                        GGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCA                       >  SRR4302542.1268310/1‑94 (MQ=60)
                                                                        GGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCA                       <  SRR4302542.2786215/94‑1 (MQ=60)
                                                                        GGGCGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCA                       >  SRR4302542.1281363/1‑94 (MQ=60)
                                                                           CGTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCA                    >  SRR4302542.6826572/1‑94 (MQ=60)
                                                                            GTTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCAC                   >  SRR4302542.152930/1‑94 (MQ=60)
                                                                             TTGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACC                  <  SRR4302542.1033652/94‑1 (MQ=60)
                                                                              TGACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCT                 >  SRR4302542.4185046/1‑94 (MQ=60)
                                                                               GACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTA                >  SRR4302542.7473157/1‑94 (MQ=60)
                                                                               GACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTA                >  SRR4302542.3452744/1‑94 (MQ=60)
                                                                                ACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTAT               <  SRR4302542.6344429/94‑1 (MQ=60)
                                                                                ACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTAT               <  SRR4302542.6504542/94‑1 (MQ=60)
                                                                                ACCGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTAT               <  SRR4302542.741911/94‑1 (MQ=60)
                                                                                  CGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCA             >  SRR4302542.4393831/1‑94 (MQ=60)
                                                                                  CGTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCA             >  SRR4302542.4665540/1‑94 (MQ=60)
                                                                                  CGTGCCGATCCACTGGAACAGGGCGCGGGAGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCA             >  SRR4302542.4733200/1‑94 (MQ=60)
                                                                                   GTGCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCAC            <  SRR4302542.4737825/94‑1 (MQ=60)
                                                                                     GCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCT          <  SRR4302542.5517683/94‑1 (MQ=60)
                                                                                     GCCGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCT          >  SRR4302542.5151550/1‑94 (MQ=60)
                                                                                       CGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTAT        <  SRR4302542.4973456/94‑1 (MQ=60)
                                                                                       CGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTAT        <  SRR4302542.2284845/94‑1 (MQ=60)
                                                                                       CGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTAT        >  SRR4302542.2236019/1‑94 (MQ=60)
                                                                                       CGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTAT        >  SRR4302542.108974/1‑94 (MQ=60)
                                                                                       CGATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTAT        <  SRR4302542.7575868/94‑1 (MQ=60)
                                                                                        GATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATG       >  SRR4302542.6799659/1‑94 (MQ=60)
                                                                                        GATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATG       >  SRR4302542.7585300/1‑94 (MQ=60)
                                                                                        GATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATG       >  SRR4302542.6780314/1‑94 (MQ=60)
                                                                                        GATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATG       >  SRR4302542.6884500/1‑94 (MQ=60)
                                                                                         ATCCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGC      >  SRR4302542.3955488/1‑94 (MQ=60)
                                                                                           CCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCAC    >  SRR4302542.6155792/1‑94 (MQ=60)
                                                                                           CCACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCAC    >  SRR4302542.635347/1‑94 (MQ=60)
                                                                                            CACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACA   >  SRR4302542.1806393/1‑94 (MQ=60)
                                                                                            CACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACA   >  SRR4302542.4476296/1‑94 (MQ=60)
                                                                                             ACTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACAC  <  SRR4302542.4983296/94‑1 (MQ=60)
                                                                                             |                                                                                             
CGACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACAC  >  NC_000913/3084967‑3085153

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑