Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,099,661	(A)_5→6	intergenic (‑19/+164)	yggN ← / ← b2959	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,099,656	1	.	A	99.3%	1102.0 / ‑2.2	284	intergenic (‑14/+169)	yggN/b2959	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (1/1); new base A (133/149); total (134/150)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 307 total aligned reads displayed.

TGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑AAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGC  >  NC_000913/3099564‑3099743

tGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAg                                                                                          >  2:7258659/1‑93 (MQ=255)

     cTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑aaaaa                                                                                    <  1:3125768/93‑1 (MQ=255)

      tGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑aaaaaa                                                                                   <  2:5147672/93‑2 (MQ=255)

      tGCACTGGTAGTCGGCGTGAGCGGTCATAGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑aaaaaa                                                                                   >  1:5003525/1‑92 (MQ=255)

       gCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑aaaaaat                                                                                  >  2:267615/1‑91 (MQ=255)

       gCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑aaaaaat                                                                                  >  2:4450218/1‑91 (MQ=255)

        cACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑aaaaaatc                                                                                 <  1:2471883/93‑4 (MQ=255)

         aCTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑aaaaaatca                                                                                <  1:1313433/93‑5 (MQ=255)

           tGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAgg                                                                               <  2:4549297/93‑1 (MQ=255)

            ggTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGc                                                                              <  1:6547577/93‑1 (MQ=255)

            ggTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGc                                                                              >  2:4337919/1‑93 (MQ=255)

              tAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCa                                                                            <  1:6836947/93‑1 (MQ=255)

               aGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAg                                                                           >  2:2525901/1‑93 (MQ=255)

                 tCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCa                                                                         <  2:275473/93‑1 (MQ=255)

                 tCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCa                                                                         >  1:4136859/1‑93 (MQ=255)

                  cGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCAt                                                                        <  2:2009491/93‑1 (MQ=255)

                   ggCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCAtt                                                                       >  2:5904685/1‑93 (MQ=255)

                    gCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCAttt                                                                      <  2:1112876/93‑1 (MQ=255)

                    gCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCAttt                                                                      >  1:6144994/1‑93 (MQ=255)

                      gTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGc                                                                    >  2:7033330/1‑93 (MQ=255)

                      gTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGc                                                                    <  2:5444834/93‑1 (MQ=255)

                       tGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCt                                                                   <  2:5958175/93‑1 (MQ=255)

                       tGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCt                                                                   >  1:4266193/1‑93 (MQ=255)

                       tGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCt                                                                   <  2:3618061/93‑1 (MQ=255)

                       tGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCt                                                                   >  2:3503182/1‑93 (MQ=255)

                       tGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCt                                                                   <  1:1018982/93‑1 (MQ=255)

                         aGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTgg                                                                 <  1:5775337/93‑1 (MQ=255)

                          gCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGc                                                                >  2:1285118/1‑93 (MQ=255)

                           cGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCTTTTTGCGCATCATAGTCTCCCCTAAAAA‑AAAAATCAGGCCAGCATTTGCTGGcc                                                               <  1:158257/93‑1 (MQ=255)

                              tCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCa                                                            >  2:2974239/1‑93 (MQ=255)

                              tCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCa                                                            <  2:5742456/93‑1 (MQ=255)

                               cATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAg                                                           >  1:1396120/1‑93 (MQ=255)

                                aTTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGa                                                          <  1:2700334/93‑1 (MQ=255)

                                aTTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGa                                                          >  2:7177691/1‑93 (MQ=255)

                                      gTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATa                                                    >  1:1215774/1‑93 (MQ=255)

                                      gTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATa                                                    >  1:2353998/1‑93 (MQ=255)

                                       tCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATaa                                                   <  2:5632592/93‑1 (MQ=255)

                                       tCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATaa                                                   >  2:5386085/1‑93 (MQ=255)

                                           tGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACaaa                                               <  1:6708455/93‑1 (MQ=255)

                                           tGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACaaa                                               >  2:3943659/1‑93 (MQ=255)

                                            gAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAg                                              <  2:4069590/93‑1 (MQ=255)

                                             aaaGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGt                                             <  1:1791937/93‑1 (MQ=255)

                                             aaaGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGt                                             <  2:4718088/93‑1 (MQ=255)

                                             aaaGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGt                                             <  1:632780/93‑1 (MQ=255)

                                                gTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcg                                          <  2:5243200/93‑1 (MQ=255)

                                                 tgctgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcgc                                         <  1:97923/93‑1 (MQ=255)

                                                   ctgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGt                                       <  2:5041877/93‑1 (MQ=255)

                                                    tgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGtt                                      <  1:33592/93‑1 (MQ=255)

                                                     gccgccAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGttt                                     <  2:6255698/93‑1 (MQ=255)

                                                     gccgccAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGttt                                     <  1:6632498/93‑1 (MQ=255)

                                                      ccgccAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGtttt                                    >  2:4822715/1‑93 (MQ=255)

                                                        gccAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTcc                                  >  2:663454/1‑93 (MQ=255)

                                                        gccAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTcc                                  >  1:6937456/1‑93 (MQ=255)

                                                         ccAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCa                                 <  1:5623539/93‑1 (MQ=255)

                                                         ccAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCa                                 >  1:436244/1‑93 (MQ=255)

                                                          cagcagCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCAt                                <  1:7330954/93‑1 (MQ=255)

                                                          cagcagCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCAt                                >  1:387700/1‑93 (MQ=255)

                                                            gcagcaTTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGc                              >  2:767711/1‑93 (MQ=255)

                                                            gcagcaTTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGc                              >  1:2784143/1‑93 (MQ=255)

                                                             cagcaTTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGcc                             <  1:4591730/93‑1 (MQ=255)

                                                              agcaTTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTTATAACAAAGTACGCGTTTTCCATGCCg                            >  2:1640198/1‑93 (MQ=255)

                                                                caTTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGa                          >  2:6363523/1‑93 (MQ=255)

                                                                caTTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGa                          >  2:1730546/1‑93 (MQ=255)

                                                                 aTTTTGCGCATCATAGTTTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGAt                         >  1:6466718/1‑93 (MQ=255)

                                                                  ttttGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATg                        >  2:2168238/1‑93 (MQ=255)

                                                                   tttGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgc                       >  2:4138623/1‑93 (MQ=255)

                                                                    ttGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgcg                      <  1:3687031/93‑1 (MQ=255)

                                                                      gcgcATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgcggc                    >  2:7452564/1‑93 (MQ=255)

                                                                      gcgcATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgcggc                    <  2:583025/93‑1 (MQ=255)

                                                                        gcATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGt                  >  2:7380413/1‑93 (MQ=255)

                                                                        gcATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGt                  <  1:4457/93‑1 (MQ=255)

                                                                          atcatAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTaa                >  1:808457/1‑93 (MQ=255)

                                                                           tcatAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTaaa               >  2:4955036/1‑93 (MQ=255)

                                                                           tcatAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTaaa               >  2:4998826/1‑93 (MQ=255)

                                                                           tcatAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTaaa               >  1:5310134/1‑93 (MQ=255)

                                                                           tcatAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTaaa               <  2:3200525/93‑1 (MQ=255)

                                                                            catAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAac              <  2:4612405/93‑1 (MQ=255)

                                                                            catAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAac              <  1:5180729/93‑1 (MQ=255)

                                                                             atAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAaca             <  1:5698877/93‑1 (MQ=255)

                                                                             atAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAaca             >  2:2086139/1‑93 (MQ=255)

                                                                              tAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAacac            <  1:2967084/93‑1 (MQ=255)

                                                                               aGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACAcc           <  2:534664/93‑1 (MQ=255)

                                                                                gTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCt          <  2:3039306/93‑1 (MQ=255)

                                                                                gTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCt          >  1:3999127/1‑93 (MQ=255)

                                                                                 tCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCtt         <  1:4733709/93‑1 (MQ=255)

                                                                                 tCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCtt         >  1:4887490/1‑93 (MQ=255)

                                                                                 tCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCtt         <  1:492369/93‑1 (MQ=255)

                                                                                 tCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCtt         <  1:6102828/93‑1 (MQ=255)

                                                                                 tCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCtt         >  2:3159378/1‑93 (MQ=255)

                                                                                  cTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTa        >  1:7197136/1‑93 (MQ=255)

                                                                                    tCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATc      <  2:6585131/93‑1 (MQ=255)

                                                                                     cccT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATcc     <  1:147063/93‑1 (MQ=255)

                                                                                      ccT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATccc    <  2:4915728/93‑1 (MQ=255)

                                                                                      ccT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATccc    >  2:378619/1‑93 (MQ=255)

                                                                                       cT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCg   <  1:3586885/93‑1 (MQ=255)

                                                                                       cT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCg   >  2:6802099/1‑93 (MQ=255)

                                                                                        t‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGc  >  1:5950083/1‑93 (MQ=255)

                                                                                        t‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGc  >  2:4251328/1‑93 (MQ=255)

                                                                                        t‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGc  >  1:2011711/1‑93 (MQ=255)

                                                                                        t‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGc  >  2:2895020/1‑93 (MQ=255)

TGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑AAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGC  >  NC_000913/3099564‑3099743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑AAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATC  >  NC_000913/3099568‑3099753

GCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑AAAAA                                                                                              <  SRR4302542.1145803/94‑1 (MQ=60)

GCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑AAAAA                                                                                              >  SRR4302542.5357052/1‑94 (MQ=60)

 CTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑AAAAAA                                                                                             <  SRR4302542.3155496/94‑1 (MQ=60)

 CTGCACTGGTAGTCGGCGTGAGCGGTCATAGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑AAAAAA                                                                                             >  SRR4302542.5052124/1‑94 (MQ=60)

  TGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑AAAAAat                                                                                            >  SRR4302542.3977756/1‑92 (MQ=60)

    CGCTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCA                                                                                           <  SRR4302542.5906118/94‑1 (MQ=60)

    CACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCA                                                                                           <  SRR4302542.2495870/94‑1 (MQ=60)

    CACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCA                                                                                           <  SRR4302542.6080584/94‑1 (MQ=60)

     ACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAG                                                                                          <  SRR4302542.1324748/94‑1 (MQ=60)

     ACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAG                                                                                          >  SRR4302542.4062328/1‑94 (MQ=60)

       TGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGC                                                                                        <  SRR4302542.1582354/94‑1 (MQ=60)

        GGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCC                                                                                       <  SRR4302542.6612139/94‑1 (MQ=60)

          TAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAG                                                                                     <  SRR4302542.6904130/94‑1 (MQ=60)

           AGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGC                                                                                    >  SRR4302542.5275476/1‑94 (MQ=60)

            GTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCA                                                                                   <  SRR4302542.659046/94‑1 (MQ=60)

            GTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCA                                                                                   >  SRR4302542.4177619/1‑94 (MQ=60)

              CGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATT                                                                                 >  SRR4302542.4052739/1‑94 (MQ=60)

               GGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTT                                                                                <  SRR4302542.7474797/94‑1 (MQ=60)

               GGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTT                                                                                >  SRR4302542.6204448/1‑94 (MQ=60)

               GGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTT                                                                                >  SRR4302542.5216633/1‑94 (MQ=60)

               GCCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTT                                                                                <  SRR4302542.2439255/94‑1 (MQ=60)

                GCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGTATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTG                                                                               <  SRR4302542.6287521/94‑1 (MQ=60)

                 CGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGC                                                                              >  SRR4302542.1511002/1‑94 (MQ=60)

                  GTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCT                                                                             >  SRR4302542.4308179/1‑94 (MQ=60)

                  GTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCT                                                                             >  SRR4302542.4088828/1‑94 (MQ=60)

                   TGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTG                                                                            <  SRR4302542.1027758/94‑1 (MQ=60)

                   TGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTG                                                                            <  SRR4302542.1605404/94‑1 (MQ=60)

                    GAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGG                                                                           <  SRR4302542.3675827/94‑1 (MQ=60)

                    GAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGG                                                                           <  SRR4302542.1265868/94‑1 (MQ=60)

                     AGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGC                                                                          <  SRR4302542.5831399/94‑1 (MQ=60)

                      GCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCC                                                                         >  SRR4302542.5564109/1‑94 (MQ=60)

                       CGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCTTTTTGCGCATCATAGTCTCCCCTAAAAA‑AAAAATCAGGCCAGCATTTGCTGGCCC                                                                        <  SRR4302542.159602/94‑1 (MQ=60)

                       CGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGAATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCC                                                                        >  SRR4302542.7305532/1‑94 (MQ=60)

                        GGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCC                                                                       >  SRR4302542.3609486/1‑94 (MQ=60)

                          TCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAG                                                                     <  SRR4302542.4356372/94‑1 (MQ=60)

                          TCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAG                                                                     >  SRR4302542.6184822/1‑94 (MQ=60)

                          TCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAG                                                                     >  SRR4302542.1408185/1‑94 (MQ=60)

                          TCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAG                                                                     <  SRR4302542.3545351/94‑1 (MQ=60)

                            ATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGAT                                                                   <  SRR4302542.2726384/94‑1 (MQ=60)

                            ATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGAT                                                                   <  SRR4302542.6684392/94‑1 (MQ=60)

                            ATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGAT                                                                   >  SRR4302542.6853803/1‑94 (MQ=60)

                            ATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGAT                                                                   >  SRR4302542.6404750/1‑94 (MQ=60)

                            ATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGAT                                                                   >  SRR4302542.1356631/1‑94 (MQ=60)

                             TTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATT                                                                  <  SRR4302542.6711146/94‑1 (MQ=60)

                             TTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATT                                                                  >  SRR4302542.1424128/1‑94 (MQ=60)

                               GCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGA                                                                >  SRR4302542.2458953/1‑94 (MQ=60)

                                CCGT‑ACTGGAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAAGCAGGCCAGCATTTGCTGGCCCCAGATTGATA                                                              <  SRR4302542.6965717/94‑1 (MQ=60)

                                 CGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATA                                                              >  SRR4302542.1226236/1‑94 (MQ=60)

                                 CGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATA                                                              >  SRR4302542.2374214/1‑94 (MQ=60)

                                 CGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATA                                                              <  SRR4302542.7006387/94‑1 (MQ=60)

                                 CGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATA                                                              <  SRR4302542.6953798/94‑1 (MQ=60)

                                    CACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACA                                                           >  SRR4302542.3130013/1‑94 (MQ=60)

                                    CACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACA                                                           <  SRR4302542.440491/94‑1 (MQ=60)

                                    CACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACA                                                           >  SRR4302542.365897/1‑94 (MQ=60)

                                     ACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAA                                                          >  SRR4302542.5003366/1‑94 (MQ=60)

                                       TGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAG                                                        <  SRR4302542.3568422/94‑1 (MQ=60)

                                       TGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAG                                                        <  SRR4302542.7327874/94‑1 (MQ=60)

                                       TGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAG                                                        <  SRR4302542.6774545/94‑1 (MQ=60)

                                       TGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAG                                                        <  SRR4302542.5519183/94‑1 (MQ=60)

                                        GAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGT                                                       >  SRR4302542.3887046/1‑94 (MQ=60)

                                        GAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGT                                                       >  SRR4302542.574396/1‑94 (MQ=60)

                                         AAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTA                                                      <  SRR4302542.4777796/94‑1 (MQ=60)

                                         AAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTA                                                      <  SRR4302542.1807484/94‑1 (MQ=60)

                                         AAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTA                                                      <  SRR4302542.638233/94‑1 (MQ=60)

                                         AAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTA                                                      >  SRR4302542.6621953/1‑94 (MQ=60)

                                         AAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTA                                                      <  SRR4302542.3935075/94‑1 (MQ=60)

                                          AAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAC                                                     <  SRR4302542.4672150/94‑1 (MQ=60)

                                           AGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACG                                                    <  SRR4302542.1730776/94‑1 (MQ=60)

                                            GTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGC                                                   <  SRR4302542.6837574/94‑1 (MQ=60)

                                            GTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGC                                                   >  SRR4302542.5779020/1‑94 (MQ=60)

                                             TGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCG                                                  <  SRR4302542.98747/94‑1 (MQ=60)

                                             TGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCG                                                  <  SRR4302542.4438104/94‑1 (MQ=60)

                                             TGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCG                                                  <  SRR4302542.5691239/94‑1 (MQ=60)

                                                TGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTT                                               >  SRR4302542.3160576/1‑94 (MQ=60)

                                                TGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTT                                               <  SRR4302542.2716059/94‑1 (MQ=60)

                                                TGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTT                                               <  SRR4302542.33889/94‑1 (MQ=60)

                                                 GCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTT                                              <  SRR4302542.6697879/94‑1 (MQ=60)

                                                  CCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTC                                             <  SRR4302542.4786637/94‑1 (MQ=60)

                                                   CGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCC                                            >  SRR4302542.7005612/1‑94 (MQ=60)

                                                   CGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCC                                            <  SRR4302542.4511352/94‑1 (MQ=60)

                                                   CGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCC                                            >  SRR4302542.1174694/1‑94 (MQ=60)

                                                   CGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCC                                            <  SRR4302542.3354032/94‑1 (MQ=60)

                                                    GCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCA                                           >  SRR4302542.440023/1‑94 (MQ=60)

                                                    GCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCA                                           <  SRR4302542.2315670/94‑1 (MQ=60)

                                                     CCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCAT                                          <  SRR4302542.5678156/94‑1 (MQ=60)

                                                     CCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCAT                                          >  SRR4302542.391063/1‑94 (MQ=60)

                                                      CAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATG                                         <  SRR4302542.4221674/94‑1 (MQ=60)

                                                      CAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATG                                         <  SRR4302542.7402768/94‑1 (MQ=60)

                                                       AGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGC                                        >  SRR4302542.4371577/1‑94 (MQ=60)

                                                       AGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGC                                        <  SRR4302542.7123819/94‑1 (MQ=60)

                                                       AGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGC                                        >  SRR4302542.2810948/1‑94 (MQ=60)

                                                         CAGCATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCG                                      <  SRR4302542.4636638/94‑1 (MQ=60)

                                                            CATTTTGCGCATCATAGTTTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGAT                                   >  SRR4302542.6530426/1‑94 (MQ=60)

                                                            CATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGAT                                   >  SRR4302542.3786011/1‑94 (MQ=60)

                                                            CATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGAT                                   >  SRR4302542.5222247/1‑94 (MQ=60)

                                                             ATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACTCGTTTTCCATGCCGGATG                                  <  SRR4302542.619602/94‑1 (MQ=60)

                                                             ATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATG                                  <  SRR4302542.4970431/94‑1 (MQ=60)

                                                             ATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATG                                  <  SRR4302542.6584669/94‑1 (MQ=60)

                                                             ATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATG                                  >  SRR4302542.6713831/1‑94 (MQ=60)

                                                             ATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATG                                  <  SRR4302542.7208409/94‑1 (MQ=60)

                                                             ATTTTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATG                                  <  SRR4302542.1352496/94‑1 (MQ=60)

                                                                TTGCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGG                               <  SRR4302542.3723422/94‑1 (MQ=60)

                                                                  GCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCG                             <  SRR4302542.1887065/94‑1 (MQ=60)

                                                                  GCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCG                             <  SRR4302542.2760888/94‑1 (MQ=60)

                                                                  GCGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCG                             <  SRR4302542.6443805/94‑1 (MQ=60)

                                                                   CGCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGT                            <  SRR4302542.2743088/94‑1 (MQ=60)

                                                                    GCATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTA                           <  SRR4302542.4492/94‑1 (MQ=60)

                                                                     CATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAA                          >  SRR4302542.815415/1‑94 (MQ=60)

                                                                     CATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAA                          >  SRR4302542.5797470/1‑94 (MQ=60)

                                                                     CATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAA                          >  SRR4302542.866370/1‑94 (MQ=60)

                                                                      ATCATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAA                         >  SRR4302542.5361724/1‑94 (MQ=60)

                                                                        CATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACA                       <  SRR4302542.937157/94‑1 (MQ=60)

                                                                        CATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACA                       <  SRR4302542.5231062/94‑1 (MQ=60)

                                                                         ATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACAC                      <  SRR4302542.5264446/94‑1 (MQ=60)

                                                                         ATAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACAC                      <  SRR4302542.5754191/94‑1 (MQ=60)

                                                                          TAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACC                     <  SRR4302542.142352/94‑1 (MQ=60)

                                                                          TAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACC                     <  SRR4302542.3090287/94‑1 (MQ=60)

                                                                          TAGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACC                     <  SRR4302542.2995514/94‑1 (MQ=60)

                                                                           AGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCT                    >  SRR4302542.7475390/1‑94 (MQ=60)

                                                                           AGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCT                    <  SRR4302542.1879646/94‑1 (MQ=60)

                                                                           AGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCT                    >  SRR4302542.2702271/1‑94 (MQ=60)

                                                                           AGTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCT                    >  SRR4302542.4038571/1‑94 (MQ=60)

                                                                            GTCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTT                   >  SRR4302542.4935036/1‑94 (MQ=60)

                                                                             TCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTA                  <  SRR4302542.2927890/94‑1 (MQ=60)

                                                                             TCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTA                  <  SRR4302542.6161886/94‑1 (MQ=60)

                                                                             TCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTA                  <  SRR4302542.6067868/94‑1 (MQ=60)

                                                                             TCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTA                  >  SRR4302542.7267762/1‑94 (MQ=60)

                                                                             TCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTA                  <  SRR4302542.4779864/94‑1 (MQ=60)

                                                                             TCTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTA                  <  SRR4302542.496616/94‑1 (MQ=60)

                                                                              CTTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTAT                 <  SRR4302542.4965297/94‑1 (MQ=60)

                                                                               TTCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATC                >  SRR4302542.2885980/1‑94 (MQ=60)

                                                                                TCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCC               >  SRR4302542.2223503/1‑94 (MQ=60)

                                                                                TCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCC               <  SRR4302542.6001276/94‑1 (MQ=60)

                                                                                TCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCC               >  SRR4302542.5912877/1‑94 (MQ=60)

                                                                                TCCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCC               >  SRR4302542.989192/1‑94 (MQ=60)

                                                                                 CCCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCC              <  SRR4302542.148297/94‑1 (MQ=60)

                                                                                  CCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCG             >  SRR4302542.4978491/1‑94 (MQ=60)

                                                                                  CCT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCG             <  SRR4302542.4237191/94‑1 (MQ=60)

                                                                                   CT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGC            <  SRR4302542.3620341/94‑1 (MQ=60)

                                                                                   CT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGC            >  SRR4302542.6007711/1‑94 (MQ=60)

                                                                                   CT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGC            >  SRR4302542.2029082/1‑94 (MQ=60)

                                                                                   CT‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATACGGCGTAAACACCTTATCCCGC            >  SRR4302542.6364228/1‑94 (MQ=60)

                                                                                    T‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCC           <  SRR4302542.1274778/94‑1 (MQ=60)

                                                                                    T‑CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCC           >  SRR4302542.4113862/1‑94 (MQ=60)

                                                                                      CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCT          <  SRR4302542.4240785/94‑1 (MQ=60)

                                                                                      CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCT          <  SRR4302542.6175403/94‑1 (MQ=60)

                                                                                      CAAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCT          >  SRR4302542.4969932/1‑94 (MQ=60)

                                                                                       AAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTA         >  SRR4302542.890983/1‑94 (MQ=60)

                                                                                       AAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTA         >  SRR4302542.4560208/1‑94 (MQ=60)

                                                                                       AAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTA         >  SRR4302542.2802975/1‑94 (MQ=60)

                                                                                       AAGAAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTA         >  SRR4302542.4301514/1‑94 (MQ=60)

                                                                                         gaAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACT       <  SRR4302542.4889909/92‑1 (MQ=60)

                                                                                         gaAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACT       >  SRR4302542.6004670/3‑94 (MQ=60)

                                                                                         gaAAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACT       <  SRR4302542.1185036/92‑1 (MQ=60)

                                                                                         A‑AAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTC      >  SRR4302542.1859031/1‑94 (MQ=60)

                                                                                           AAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCG     <  SRR4302542.5958106/94‑1 (MQ=60)

                                                                                           AAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCG     >  SRR4302542.6017689/1‑94 (MQ=60)

                                                                                           AAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCG     >  SRR4302542.2582566/1‑94 (MQ=60)

                                                                                            AAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGA    <  SRR4302542.4568822/94‑1 (MQ=60)

                                                                                             AAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGAT   <  SRR4302542.5884898/94‑1 (MQ=60)

                                                                                             AAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGAT   <  SRR4302542.1930021/94‑1 (MQ=60)

                                                                                             AAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGAT   >  SRR4302542.3734181/1‑94 (MQ=60)

                                                                                              AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATC  <  SRR4302542.4571288/94‑1 (MQ=60)

                                                                                              AATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATC  <  SRR4302542.6685334/94‑1 (MQ=60)

GCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCT‑CAAG‑AAAAATCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCTACTCGATC  >  NC_000913/3099568‑3099753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`