Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,152,247	+C	intergenic (+10/+29)	yghB → / ← yqhC	hypothetical protein/putative ARAC‑type regulatory protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,152,244	1	.	C	100.0%	872.7 / NA	257	intergenic (+7/+32)	yghB/yqhC	hypothetical protein/putative ARAC‑type regulatory protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (166/91); total (166/91)

Only 100 of 306 total aligned reads displayed.

TGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTT‑CCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAG  >  NC_000913/3152152‑3152333

tgatgaTCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGAtttt                                                                                            >  1:6039095/1‑93 (MQ=255)

tgatgaTCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGAtttt                                                                                            >  1:1001113/1‑93 (MQ=255)

tgatgaTCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGAtttt                                                                                            >  2:4960851/1‑93 (MQ=255)

 gatgatCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTtt‑c                                                                                          <  2:121723/93‑1 (MQ=255)

 gatgatCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTtt‑c                                                                                          <  1:4035486/93‑1 (MQ=255)

 gatgatCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTtt‑c                                                                                          <  1:1910679/93‑1 (MQ=255)

   tgatCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTTTGGTGATTAAAAAAAAAATACTGTAACGCCTGACGATTtt‑cc                                                                                         >  1:6671717/1‑93 (MQ=255)

   tgatCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTtt‑ccc                                                                                        <  1:4259473/93‑1 (MQ=255)

   tgatCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTtt‑ccc                                                                                        <  2:294809/93‑1 (MQ=255)

   tgatCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTtt‑ccc                                                                                        >  2:5784540/1‑93 (MQ=255)

    gatCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTtt‑cccc                                                                                       >  2:1389923/1‑92 (MQ=255)

      tCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGGGATT‑AAAAAAAAATACTGTAACGCCTGACGATTtt‑ccccgt                                                                                     >  1:3961411/1‑90 (MQ=255)

          gCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTtccccgttccc                                                                                  >  2:5132135/1‑93 (MQ=255)

          gCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTtccccgttccc                                                                                  >  1:643416/1‑93 (MQ=255)

          gCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTtccccgttccc                                                                                  <  1:1185616/93‑1 (MQ=255)

           ccAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTtccccgttcccg                                                                                 >  2:1558223/1‑93 (MQ=255)

            cAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCgg                                                                                <  2:2688006/93‑1 (MQ=255)

            cAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCgg                                                                                <  1:1457324/93‑1 (MQ=255)

             aaTTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGt                                                                               <  2:4159717/93‑1 (MQ=255)

             aaTTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGt                                                                               <  1:742310/93‑1 (MQ=255)

              aTTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGtt                                                                              >  2:1762072/1‑93 (MQ=255)

              aTTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGtt                                                                              >  2:842736/1‑93 (MQ=255)

                   cTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGt                                                                         <  2:7468443/93‑1 (MQ=255)

                    ttGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTa                                                                        >  2:7079121/1‑93 (MQ=255)

                    ttGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTa                                                                        >  1:6525520/1‑93 (MQ=255)

                     tGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTAc                                                                       >  1:6768989/1‑93 (MQ=255)

                       ttAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCg                                                                     >  1:6969620/1‑93 (MQ=255)

                          aCCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGa                                                                  >  2:424394/1‑93 (MQ=255)

                             gCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACg                                                               >  1:800158/1‑93 (MQ=255)

                             gCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACg                                                               <  2:20223/93‑1 (MQ=255)

                             gCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACg                                                               >  1:2990895/1‑93 (MQ=255)

                              cTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGt                                                              >  2:4494773/1‑93 (MQ=255)

                              cTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGt                                                              >  1:5761940/1‑93 (MQ=255)

                               tGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTa                                                             >  1:5103213/1‑93 (MQ=255)

                               tGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCCGGGACgga                                                             >  1:5001294/1‑91 (MQ=255)

                                ggCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTAt                                                            >  2:4092319/1‑93 (MQ=255)

                                 gCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTAtt                                                           >  1:7075852/1‑93 (MQ=255)

                                 gCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTAtt                                                           <  2:6272710/93‑1 (MQ=255)

                                   ttGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTa                                                         >  1:2824570/1‑93 (MQ=255)

                                   ttGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTa                                                         >  1:935047/1‑93 (MQ=255)

                                    tGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTaa                                                        <  2:2439042/93‑1 (MQ=255)

                                    tGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTaa                                                        <  1:5081831/93‑1 (MQ=255)

                                    tGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTaa                                                        <  1:3067864/93‑1 (MQ=255)

                                    tGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTaa                                                        <  2:3334563/93‑1 (MQ=255)

                                      ttAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAAtt                                                      <  1:5920410/93‑1 (MQ=255)

                                       tAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTc                                                     <  1:6154333/93‑1 (MQ=255)

                                        aGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTcc                                                    >  1:4944666/1‑93 (MQ=255)

                                        aGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTcc                                                    <  2:5897543/93‑1 (MQ=255)

                                         ggCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTccc                                                   >  2:5975449/1‑93 (MQ=255)

                                          gCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTcccc                                                  <  2:5331843/93‑1 (MQ=255)

                                              gCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCa                                              <  2:2288372/93‑1 (MQ=255)

                                                tGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATc                                            >  2:368734/1‑93 (MQ=255)

                                                 gTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCTGTTGCTGTACCGGGGACGCATTTAATTCCCCTGCATcc                                           >  2:5509896/1‑92 (MQ=255)

                                                 gTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCg                                           >  1:4150186/1‑93 (MQ=255)

                                                  tttGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGc                                          >  2:3946282/1‑93 (MQ=255)

                                                  tttGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGc                                          >  2:7498300/1‑93 (MQ=255)

                                                  tttGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGCTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCCGCTTcac                                          >  2:1438137/1‑91 (MQ=255)

                                                       ggtgATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCa                                     >  1:1513730/1‑93 (MQ=255)

                                                       ggtgATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCa                                     <  2:5659773/93‑1 (MQ=255)

                                                       ggtgATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCa                                     >  1:4625504/1‑93 (MQ=255)

                                                       ggtgATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCa                                     >  1:5633728/1‑93 (MQ=255)

                                                           aTT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCt                                 <  2:2828998/93‑1 (MQ=255)

                                                           aTT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCt                                 <  2:4315867/93‑1 (MQ=255)

                                                            tt‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCtt                                <  2:2536411/93‑1 (MQ=255)

                                                                aaaaaaaaTACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGcc                             <  1:6304079/93‑1 (MQ=255)

                                                                aaaaaaaaTACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGcc                             <  2:6947442/93‑1 (MQ=255)

                                                                aaaaaaaaTACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGcc                             <  1:3773655/93‑1 (MQ=255)

                                                                aaaaaaaaTACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGcc                             <  1:354382/93‑1 (MQ=255)

                                                                aaaaaaaaTACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGcc                             >  2:3137799/1‑93 (MQ=255)

                                                                     aaaTACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATc                        <  1:1965854/93‑1 (MQ=255)

                                                                     aaaTACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATc                        <  1:3332253/93‑1 (MQ=255)

                                                                       aTACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCtt                      >  2:4684752/1‑93 (MQ=255)

                                                                         aCTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTcc                    >  1:2410236/1‑93 (MQ=255)

                                                                         aCTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTcc                    <  2:1672850/93‑1 (MQ=255)

                                                                          cTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTccc                   >  2:7413060/1‑93 (MQ=255)

                                                                          cTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTccc                   >  2:2330687/1‑93 (MQ=255)

                                                                           tGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTcccc                  <  2:3486523/93‑1 (MQ=255)

                                                                           tGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTcccc                  >  1:6862924/1‑93 (MQ=255)

                                                                           tGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTcccc                  <  2:6732743/93‑1 (MQ=255)

                                                                           tGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTcccc                  >  2:1132245/1‑93 (MQ=255)

                                                                           tGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCCCATCTTcccc                  >  1:1315988/1‑93 (MQ=255)

                                                                            gTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTccccc                 <  1:2305422/93‑1 (MQ=255)

                                                                                cGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCg             <  1:2124606/93‑1 (MQ=255)

                                                                                 gCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAATGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGt            >  1:341729/1‑93 (MQ=255)

                                                                                 gCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGt            >  2:615055/1‑93 (MQ=255)

                                                                                  ccTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTc           >  2:4654723/1‑93 (MQ=255)

                                                                                   cTGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTca          >  1:5390144/1‑93 (MQ=255)

                                                                                    tGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTcac         >  1:1729737/1‑93 (MQ=255)

                                                                                    tGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTcac         >  1:1067716/1‑93 (MQ=255)

                                                                                    tGACGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCCGCGTcac         >  1:6394339/1‑93 (MQ=255)

                                                                                      aCGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCacac       >  2:1313785/1‑93 (MQ=255)

                                                                                      aCGATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCGGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCacac       <  2:4868377/93‑1 (MQ=255)

                                                                                        gATTTTCCCCGTTCCCGGTTGCTGTACCGGGGACGGATTTTATTTCCCTGCATTGCCCGCATTCTTGCCGCCTCTTCCCCCCGCGTCCCACCg     >  1:2492251/1‑93 (MQ=255)

                                                                                        gATTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCg     >  1:7143070/1‑93 (MQ=255)

                                                                                         ttttc‑CCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGaa   <  1:5506557/92‑1 (MQ=255)

                                                                                         aTTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGa    >  1:4742555/1‑93 (MQ=255)

                                                                                         aTTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGa    >  1:441635/1‑93 (MQ=255)

                                                                                         aTTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGa    >  1:3927761/1‑93 (MQ=255)

                                                                                         aTTTTCCCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGa    >  2:439550/1‑93 (MQ=255)

                                                                                          tttc‑CCCGGTCCCGGGTGCTGTTCCGGGAACCGTTTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAg  <  2:2203656/93‑1 (MQ=255)

TGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTT‑CCCGTTCCCGGTTGCTGTACCGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAG  >  NC_000913/3152152‑3152333

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTT‑CCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGT  >  NC_000913/3152154‑3152339

ATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTT‑CCC                                                                                               <  SRR4302542.67499/94‑1 (MQ=60)

 TGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTT‑CCCC                                                                                              >  SRR4302542.791870/1‑94 (MQ=60)

 TGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTT‑CCCC                                                                                              <  SRR4302542.4301414/94‑1 (MQ=60)

  GATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTT‑CCCcg                                                                                             <  SRR4302542.4261509/94‑3 (MQ=60)

  GATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTT‑CCCcg                                                                                             >  SRR4302542.6032534/1‑92 (MQ=60)

   ATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTT‑CCCcgt                                                                                            >  SRR4302542.4097740/1‑91 (MQ=60)

   ATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGGGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTT‑CCCcgt                                                                                            >  SRR4302542.4000527/1‑91 (MQ=60)

     CCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTC                                                                                           >  SRR4302542.3091568/1‑94 (MQ=60)

     CCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTC                                                                                           >  SRR4302542.6142358/1‑94 (MQ=60)

     CCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTC                                                                                           >  SRR4302542.3450537/1‑94 (MQ=60)

       TGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCC                                                                                         >  SRR4302542.648948/1‑94 (MQ=60)

        GCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCG                                                                                        <  SRR4302542.1195839/94‑1 (MQ=60)

         CCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGG                                                                                       >  SRR4302542.7417692/1‑94 (MQ=60)

         CCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGG                                                                                       >  SRR4302542.6587560/1‑94 (MQ=60)

          CAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGT                                                                                      >  SRR4302542.5847300/1‑94 (MQ=60)

          CAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGT                                                                                      >  SRR4302542.4749932/1‑94 (MQ=60)

          CAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGT                                                                                      <  SRR4302542.1469901/94‑1 (MQ=60)

          CAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGT                                                                                      >  SRR4302542.1440857/1‑94 (MQ=60)

          CAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGT                                                                                      <  SRR4302542.4237114/94‑1 (MQ=60)

          CAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTT‑CCCccttccccgg                                                                                     >  SRR4302542.1249957/1‑84 (MQ=60)

           AATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTT                                                                                     <  SRR4302542.916907/94‑1 (MQ=60)

           AATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTT                                                                                     >  SRR4302542.7109040/1‑94 (MQ=60)

           AATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTT                                                                                     <  SRR4302542.748747/94‑1 (MQ=60)

            ATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTG                                                                                    >  SRR4302542.4327161/1‑94 (MQ=60)

            ATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCCGTTG                                                                                    >  SRR4302542.1234850/1‑94 (MQ=60)

             TTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGC                                                                                   <  SRR4302542.3914750/94‑1 (MQ=60)

             TTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTCTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGC                                                                                   >  SRR4302542.308238/1‑94 (MQ=60)

              TGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCT                                                                                  >  SRR4302542.1130202/1‑94 (MQ=60)

               GCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTG                                                                                 >  SRR4302542.5133630/1‑94 (MQ=60)

                CCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTTCTGT                                                                                >  SRR4302542.3405447/1‑94 (MQ=60)

                 CTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTA                                                                               >  SRR4302542.6535092/1‑94 (MQ=60)

                 CTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTA                                                                               >  SRR4302542.6589823/1‑94 (MQ=60)

                  TTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTAC                                                                              >  SRR4302542.6835551/1‑94 (MQ=60)

                  TTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTAC                                                                              >  SRR4302542.403013/1‑94 (MQ=60)

                   TGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC                                                                             <  SRR4302542.4765818/94‑1 (MQ=60)

                   TGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGGGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC                                                                             >  SRR4302542.593976/1‑94 (MQ=60)

                    GTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑G                                                                           >  SRR4302542.6393499/1‑94 (MQ=60)

                    GTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑G                                                                           >  SRR4302542.7038086/1‑94 (MQ=60)

                      TAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGG                                                                         >  SRR4302542.2663288/1‑94 (MQ=60)

                       AACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGA                                                                        >  SRR4302542.6651821/1‑94 (MQ=60)

                       AACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGA                                                                        >  SRR4302542.3529895/1‑94 (MQ=60)

                         CCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAAC                                                                      <  SRR4302542.2335583/94‑1 (MQ=60)

                          CGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAANN                                                                     >  SRR4302542.2041700/1‑94 (MQ=60)

                          CGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACG                                                                     >  SRR4302542.3019519/1‑94 (MQ=60)

                          CGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACG                                                                     >  SRR4302542.807037/1‑94 (MQ=60)

                          CGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACG                                                                     <  SRR4302542.1503089/94‑1 (MQ=60)

                           GCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGT                                                                    >  SRR4302542.5817867/1‑94 (MQ=60)

                            CTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACCcgggacgga                                                                    >  SRR4302542.5049876/1‑85 (MQ=60)

                            CTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTA                                                                   >  SRR4302542.5152786/1‑94 (MQ=60)

                            CTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAAAACTGTAACGCCTGACGATTTTCCCCGTTTCCGGTTGCTGCACC‑GGGAAggga                                                                   >  SRR4302542.6227536/1‑90 (MQ=60)

                             TGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGGAT                                                                  >  SRR4302542.6483623/1‑94 (MQ=60)

                              GGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATT                                                                 <  SRR4302542.6127767/94‑1 (MQ=60)

                              GGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATT                                                                 >  SRR4302542.7145296/1‑94 (MQ=60)

                               GCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTT                                                                >  SRR4302542.3427944/1‑94 (MQ=60)

                               GCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTT                                                                <  SRR4302542.5815387/94‑1 (MQ=60)

                               GCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTT                                                                <  SRR4302542.640764/94‑1 (MQ=60)

                                CTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTA                                                               >  SRR4302542.1970480/1‑94 (MQ=60)

                                CTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTA                                                               >  SRR4302542.943098/1‑94 (MQ=60)

                                CTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTA                                                               >  SRR4302542.2851721/1‑94 (MQ=60)

                                 TTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAA                                                              >  SRR4302542.1691824/1‑94 (MQ=60)

                                  TGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAAT                                                             >  SRR4302542.5333967/1‑94 (MQ=60)

                                  TGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAAT                                                             <  SRR4302542.5131219/94‑1 (MQ=60)

                                  TGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAAT                                                             >  SRR4302542.397205/1‑94 (MQ=60)

                                  TGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAAT                                                             <  SRR4302542.3543659/94‑1 (MQ=60)

                                  TGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAAT                                                             <  SRR4302542.3097112/94‑1 (MQ=60)

                                  TGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAAT                                                             >  SRR4302542.714814/1‑94 (MQ=60)

                                   GTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATT                                                            >  SRR4302542.6852644/1‑94 (MQ=60)

                                   GTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATT                                                            <  SRR4302542.1943781/94‑1 (MQ=60)

                                   GTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCCGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATT                                                            >  SRR4302542.5622032/1‑94 (MQ=60)

                                    TTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTC                                                           <  SRR4302542.5977781/94‑1 (MQ=60)

                                     TAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCC                                                          >  SRR4302542.4992710/1‑94 (MQ=60)

                                     TAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCC                                                          <  SRR4302542.4996978/94‑1 (MQ=60)

                                     TAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCC                                                          <  SRR4302542.6213921/94‑1 (MQ=60)

                                     TAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCC                                                          <  SRR4302542.6229123/94‑1 (MQ=60)

                                      AGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCC                                                         >  SRR4302542.768198/1‑94 (MQ=60)

                                      AGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCC                                                         >  SRR4302542.603800/1‑94 (MQ=60)

                                      AGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCC                                                         >  SRR4302542.6484738/1‑94 (MQ=60)

                                        GCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCT                                                       >  SRR4302542.3359595/1‑94 (MQ=60)

                                          ACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTT‑CCCcggtcccgggttctggacccgggaacgatttaatttcccggc                                                     >  SRR4302542.5058043/1‑52 (MQ=60)

                                           CGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCA                                                    >  SRR4302542.5640667/1‑94 (MQ=60)

                                            GCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCAT                                                   <  SRR4302542.684092/94‑1 (MQ=60)

                                             CTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACTCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATC                                                  >  SRR4302542.2215755/1‑94 (MQ=60)

                                              TGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCG                                                 >  SRR4302542.4191061/1‑94 (MQ=60)

                                              TGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCG                                                 >  SRR4302542.5642165/1‑94 (MQ=60)

                                              TGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCG                                                 >  SRR4302542.4516525/1‑94 (MQ=60)

                                                TTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCC                                               <  SRR4302542.1869691/94‑1 (MQ=60)

                                                 TTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCCCCC                                              >  SRR4302542.6649970/1‑94 (MQ=60)

                                                   GTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGC                                            >  SRR4302542.4052459/1‑94 (MQ=60)

                                                    TGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCA                                           >  SRR4302542.5688432/1‑94 (MQ=60)

                                                    TGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCA                                           >  SRR4302542.4670698/1‑94 (MQ=60)

                                                    TGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCA                                           >  SRR4302542.1526801/1‑94 (MQ=60)

                                                    TGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCA                                           >  SRR4302542.1134400/1‑94 (MQ=60)

                                                    TGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGGATTTAATTCCCCTGCATCCCCCCCA                                           >  SRR4302542.2486423/1‑94 (MQ=60)

                                                       TGATTAAAAAAAAAATACGGTAACGCCTGACGATTTTCCCCGTTCCCGGTTcctgaccggggaacgattttatttccccggcatcgccccaatt                                          >  SRR4302542.361091/1‑51 (MQ=33)

                                                         ATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTT                                      >  SRR4302542.7011327/1‑94 (MQ=60)

                                                         ATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTT                                      >  SRR4302542.4543423/1‑94 (MQ=60)

                                                         ATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTT                                      <  SRR4302542.2411723/94‑1 (MQ=60)

                                                         ATT‑AAAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTT                                      <  SRR4302542.1421851/94‑1 (MQ=60)

                                                              AAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCG                                  <  SRR4302542.3810980/94‑1 (MQ=60)

                                                              AAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCG                                  <  SRR4302542.6366189/94‑1 (MQ=60)

                                                              AAAAAAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCG                                  <  SRR4302542.357474/94‑1 (MQ=60)

                                                                  AAAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATC                              <  SRR4302542.6788977/94‑1 (MQ=60)

                                                                   AAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCT                             >  SRR4302542.502813/1‑94 (MQ=60)

                                                                   AAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCT                             <  SRR4302542.3363614/94‑1 (MQ=60)

                                                                   AAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCT                             <  SRR4302542.1982839/94‑1 (MQ=60)

                                                                   AAATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCT                             >  SRR4302542.1258689/1‑94 (MQ=60)

                                                                     ATACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTC                           <  SRR4302542.1050948/94‑1 (MQ=60)

                                                                      TACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCC                          >  SRR4302542.4102139/1‑94 (MQ=60)

                                                                      TACTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCC                          >  SRR4302542.2433674/1‑94 (MQ=60)

                                                                        CTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCC                        >  SRR4302542.6930352/1‑94 (MQ=60)

                                                                        CTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCC                        >  SRR4302542.1518873/1‑94 (MQ=60)

                                                                        CTGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCCCATCTTCCCC                        >  SRR4302542.1327331/1‑94 (MQ=60)

                                                                         TGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCC                       >  SRR4302542.980570/1‑94 (MQ=60)

                                                                         TGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCC                       <  SRR4302542.7603355/94‑1 (MQ=60)

                                                                         TGTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCC                       <  SRR4302542.3086426/94‑1 (MQ=60)

                                                                          GTAACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCG                      <  SRR4302542.2325224/94‑1 (MQ=60)

                                                                             ACGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCG                   <  SRR4302542.4967935/94‑1 (MQ=60)

                                                                              CGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAATGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGT                  >  SRR4302542.344692/1‑94 (MQ=60)

                                                                              CGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGT                  >  SRR4302542.1884638/1‑94 (MQ=60)

                                                                              CGCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGT                  <  SRR4302542.2142940/94‑1 (MQ=60)

                                                                               GCCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTC                 >  SRR4302542.7203013/1‑94 (MQ=60)

                                                                                CCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCA                >  SRR4302542.1553632/1‑94 (MQ=60)

                                                                                CCTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCA                >  SRR4302542.5442493/1‑94 (MQ=60)

                                                                                 CTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCAC               >  SRR4302542.1076895/1‑94 (MQ=60)

                                                                                 CTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCAC               >  SRR4302542.1744749/1‑94 (MQ=60)

                                                                                 CTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCAC               >  SRR4302542.2173646/1‑94 (MQ=60)

                                                                                 CTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCAC               >  SRR4302542.5528435/1‑94 (MQ=60)

                                                                                 CTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCAC               <  SRR4302542.5145739/94‑1 (MQ=60)

                                                                                 CTGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCCGCGTCAC               >  SRR4302542.6457331/1‑94 (MQ=60)

                                                                                  TGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACA              >  SRR4302542.5746450/1‑94 (MQ=60)

                                                                                  TGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACA              <  SRR4302542.4415331/94‑1 (MQ=60)

                                                                                  TGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACA              <  SRR4302542.5443233/94‑1 (MQ=60)

                                                                                  TGACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACCGATTTAATTCCCCTGCATCCCCCCCATTCTTGCCGCATCTTCCCCCGGCGGCACA              >  SRR4302542.3986517/1‑94 (MQ=60)

                                                                                    ACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTTATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACC            <  SRR4302542.3439211/94‑1 (MQ=60)

                                                                                    ACGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACC            >  SRR4302542.1993815/1‑94 (MQ=60)

                                                                                     CGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGGACGGATTTTATTTCCCTGCATTGCCCGCATTCTTGCCGCCTCTTCCCCCCGCGTCCCACCG           >  SRR4302542.2516426/1‑94 (MQ=46)

                                                                                     CGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCG           >  SRR4302542.914640/1‑94 (MQ=60)

                                                                                     CGATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCG           >  SRR4302542.7213167/1‑94 (MQ=60)

                                                                                      GATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGA          >  SRR4302542.29088/1‑94 (MQ=60)

                                                                                      GATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGA          >  SRR4302542.4788790/1‑94 (MQ=60)

                                                                                      GATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGA          >  SRR4302542.7066667/1‑94 (MQ=60)

                                                                                      GATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGA          >  SRR4302542.3140658/1‑94 (MQ=60)

                                                                                      GATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGA          >  SRR4302542.445461/1‑94 (MQ=60)

                                                                                      GATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGA          >  SRR4302542.3966517/1‑94 (MQ=60)

                                                                                      GATTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGA          >  SRR4302542.4831073/1‑94 (MQ=60)

                                                                                        TTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAG        <  SRR4302542.5112243/94‑1 (MQ=60)

                                                                                        TTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAG        <  SRR4302542.5560074/94‑1 (MQ=60)

                                                                                        TTTTCCCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAG        <  SRR4302542.2551682/94‑1 (MQ=60)

                                                                                        TTTC‑CCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGT       <  SRR4302542.6954042/94‑1 (MQ=60)

                                                                                        TTTC‑CCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGT       <  SRR4302542.7338032/94‑1 (MQ=60)

                                                                                           C‑CCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGTGTCACACCGAAGTAAC    <  SRR4302542.719361/94‑1 (MQ=60)

                                                                                           C‑CCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAAC    <  SRR4302542.4909988/94‑1 (MQ=60)

                                                                                           C‑CCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAAC    <  SRR4302542.400905/94‑1 (MQ=60)

                                                                                           C‑CCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAAC    <  SRR4302542.4330107/94‑1 (MQ=60)

                                                                                           C‑CCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAAC    <  SRR4302542.2646514/94‑1 (MQ=60)

                                                                                             CCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACG   >  SRR4302542.5424819/1‑94 (MQ=60)

                                                                                              CCGTTCCCGGTTGCTGTACCGGGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGccaaaccgaacaaacc   >  SRR4302542.3684346/1‑78 (MQ=60)

                                                                                              CCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGT  <  SRR4302542.4172440/94‑1 (MQ=60)

                                                                                              CCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGT  <  SRR4302542.4681111/94‑1 (MQ=60)

ATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATT‑AAAAAAAAATACTGTAACGCCTGACGATTTT‑CCCGTTCCCGGTTGCTGTACC‑GGGAACGTATTTAATTCCCCTGCATCGCCCGCATTCTTGCCGCATCTTCCCCCGGCGTCACACCGAAGTAACGT  >  NC_000913/3152154‑3152339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`