Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,158,202 +C coding (961/975 nt) ygiRQ ← Fe‑S oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,158,2011.C100.0% 1021.9 / NA 304A321G (GCT→GGT) ygiRQFe‑S oxidoreductase
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (127/177);  total (127/177)

Only 100 of 333 total aligned reads displayed.

ACGCTGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑CTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGCAGCAACA  >  NC_000913/3158109‑3158288
                                                                                             |                                                                                       
aCGCTGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAg                                                                                          >  1:4168612/1‑93 (MQ=255)
    tGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑cctg                                                                                     <  2:4412148/93‑4 (MQ=255)
    tGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑cctg                                                                                     <  1:641195/93‑4 (MQ=255)
    tGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑cctg                                                                                     <  1:4601605/93‑4 (MQ=255)
     gTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑cctgg                                                                                    <  1:5170434/93‑5 (MQ=255)
       ccATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGggt                                                                                   <  1:2908246/93‑1 (MQ=255)
        cATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGggtt                                                                                  <  2:228098/93‑1 (MQ=255)
        cATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGggtt                                                                                  >  1:7252469/1‑93 (MQ=255)
        cATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGggtt                                                                                  <  2:687684/93‑1 (MQ=255)
         aTCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGggttg                                                                                 <  1:1112264/93‑1 (MQ=255)
         aTCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGggttg                                                                                 >  2:5385118/1‑93 (MQ=255)
           ctctTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGggttggt                                                                               >  2:2002819/1‑93 (MQ=255)
           ctctTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCAAACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGggttggg                                                                               >  1:6227579/1‑92 (MQ=255)
            tctTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGggttggtt                                                                              >  2:5620340/1‑93 (MQ=255)
             ctTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGttt                                                                             <  2:4335346/93‑1 (MQ=255)
             ctTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGttt                                                                             >  1:2070756/1‑93 (MQ=255)
                cGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCgt                                                                          >  1:5107718/1‑93 (MQ=255)
                  gTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCgtgg                                                                        >  1:1002614/1‑93 (MQ=255)
                    aGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCgtggtg                                                                      >  2:1208847/1‑93 (MQ=255)
                     gAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGc                                                                     <  2:3445475/93‑1 (MQ=255)
                     gAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGc                                                                     >  1:1221874/1‑93 (MQ=255)
                     gAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGc                                                                     <  2:6396968/93‑1 (MQ=255)
                      aaaGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCa                                                                    <  1:2809168/93‑1 (MQ=255)
                      aaaGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCa                                                                    >  1:4866453/1‑93 (MQ=255)
                         gCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGaa                                                                 <  1:4318729/93‑1 (MQ=255)
                          cGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAAt                                                                >  1:7054049/1‑93 (MQ=255)
                           ggAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATa                                                               >  1:3269330/1‑93 (MQ=255)
                           ggAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATa                                                               >  1:5055214/1‑93 (MQ=255)
                            gAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATAc                                                              <  1:6578616/93‑1 (MQ=255)
                             aaTAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATAcg                                                             >  2:1067414/1‑93 (MQ=255)
                              aTAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATAcgc                                                            <  2:6172485/93‑1 (MQ=255)
                              aTAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATAcgc                                                            <  1:167276/93‑1 (MQ=255)
                               tAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATAcgcg                                                           <  2:596855/93‑1 (MQ=255)
                                   aGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGc                                                       >  1:7477115/1‑93 (MQ=255)
                                    ggCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCa                                                      <  2:4136249/93‑1 (MQ=255)
                                     gCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCAt                                                     >  2:3602010/1‑93 (MQ=255)
                                      cGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATg                                                    <  2:6138874/93‑1 (MQ=255)
                                      cGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATg                                                    <  2:5718484/93‑1 (MQ=255)
                                       gggTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATgg                                                   <  2:3365679/93‑1 (MQ=255)
                                        ggTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATggg                                                  <  1:6504154/93‑1 (MQ=255)
                                         gTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGc                                                 >  1:2704149/1‑93 (MQ=255)
                                         gTTGATCCACACATAGCGGTCGCCGCGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGc                                                 >  1:2538961/1‑93 (MQ=255)
                                          ttGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCg                                                <  1:6056697/93‑1 (MQ=255)
                                          ttGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCg                                                >  2:1903872/1‑93 (MQ=255)
                                          ttGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCg                                                <  2:4751655/93‑1 (MQ=255)
                                            gATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTa                                              <  1:4930736/93‑1 (MQ=255)
                                             aTCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTAc                                             <  2:2552019/93‑1 (MQ=255)
                                             aTCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTAc                                             >  2:2461147/1‑93 (MQ=255)
                                              tCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACa                                            <  2:6097157/93‑1 (MQ=255)
                                              tCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACa                                            <  1:1709307/93‑1 (MQ=255)
                                               ccACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAg                                           >  1:5314527/1‑93 (MQ=255)
                                                 acacaTAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCa                                         >  2:1695045/1‑93 (MQ=255)
                                                  cacaTAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCAc                                        <  2:2123429/93‑1 (MQ=255)
                                                   acaTAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACt                                       >  2:3956948/1‑93 (MQ=255)
                                                   acaTAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACt                                       >  2:3877509/1‑93 (MQ=255)
                                                     aTAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACttt                                     >  2:4830720/1‑93 (MQ=255)
                                                      tAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTa                                    >  1:3084644/1‑93 (MQ=255)
                                                      tAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTa                                    <  1:5815085/93‑1 (MQ=255)
                                                       aGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTAt                                   <  1:2402772/93‑1 (MQ=255)
                                                        gCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATc                                  <  1:7097825/93‑1 (MQ=255)
                                                        gCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATc                                  <  1:3960236/93‑1 (MQ=255)
                                                          ggTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGc                                >  2:6643937/1‑93 (MQ=255)
                                                            tCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGccc                              <  1:4050372/93‑1 (MQ=255)
                                                               ccGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTc                           >  2:3050878/1‑93 (MQ=255)
                                                               ccGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTc                           <  2:3175193/93‑1 (MQ=255)
                                                                 gtgtTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCAc                         <  2:800219/93‑1 (MQ=255)
                                                                 gtgtTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCAc                         <  1:3418630/93‑1 (MQ=255)
                                                                 gtgtTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCAc                         >  1:5377889/1‑93 (MQ=255)
                                                                 gtgtTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCAc                         <  2:7503838/93‑1 (MQ=255)
                                                                   gtTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACtt                       <  1:162454/93‑1 (MQ=255)
                                                                    tttttGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACttt                      >  2:26890/1‑93 (MQ=255)
                                                                      tttGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTtct                    <  2:454772/93‑1 (MQ=255)
                                                                      tttGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTtct                    <  2:4928582/93‑1 (MQ=255)
                                                                      tttGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTtct                    >  2:838381/1‑93 (MQ=255)
                                                                      tttGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTtct                    <  1:185232/93‑1 (MQ=255)
                                                                       ttGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTtctc                   <  2:7251922/93‑1 (MQ=255)
                                                                          cATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGaa                >  2:2385321/1‑93 (MQ=255)
                                                                           aTCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGaaa               <  1:3527325/93‑1 (MQ=255)
                                                                           aTCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGaaa               >  2:3412924/1‑93 (MQ=255)
                                                                           aTCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGaaa               <  2:6499655/93‑1 (MQ=255)
                                                                            tCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAaag              >  2:3881921/1‑93 (MQ=255)
                                                                            tCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAaag              <  2:7333523/93‑1 (MQ=255)
                                                                             cAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAaaga             <  1:7345254/93‑1 (MQ=255)
                                                                              aaTGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAaagaa            >  2:2882551/1‑93 (MQ=255)
                                                                              aaTGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAaagaa            >  1:4494591/1‑93 (MQ=255)
                                                                              aaTGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAaagaa            >  1:6668107/1‑93 (MQ=255)
                                                                               aTGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAaagaag           <  1:1283083/93‑1 (MQ=255)
                                                                               aTGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAaagaag           >  2:1562567/1‑93 (MQ=255)
                                                                                tGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAgg          <  1:1983310/93‑1 (MQ=255)
                                                                                 gcgcGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGTATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAggt         <  1:3976454/93‑2 (MQ=255)
                                                                                 gcgcGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGgc         <  2:7212298/93‑1 (MQ=255)
                                                                                  cgcgGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGgca        <  1:7176485/93‑1 (MQ=255)
                                                                                    cgGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGgtagc      <  1:7524570/93‑1 (MQ=255)
                                                                                     gggCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGgtagca     <  1:6377585/93‑1 (MQ=255)
                                                                                     gggCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGgtagca     <  1:4824523/93‑1 (MQ=255)
                                                                                      ggCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCaa    <  2:6030726/93‑1 (MQ=255)
                                                                                      ggCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCaa    <  2:1432126/93‑1 (MQ=255)
                                                                                       gCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAac   <  1:5634355/93‑1 (MQ=255)
                                                                                       gCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGCAGCAac   >  2:4192360/1‑93 (MQ=255)
                                                                                        cacaGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAaca  <  1:906153/93‑1 (MQ=255)
                                                                                             |                                                                                       
ACGCTGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑CTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCGTACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGCAGCAACA  >  NC_000913/3158109‑3158288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACGCTGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑CTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGCAGCAACACGTAGGT  >  NC_000913/3158109‑3158295
                                                                                              |                                                                                              
ACGCTGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑C                                                                                                >  SRR4302542.1610422/1‑94 (MQ=60)
 CGCTGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑CC                                                                                               <  SRR4302542.1740282/94‑1 (MQ=60)
 CGCTGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑CC                                                                                               <  SRR4302542.3491600/94‑1 (MQ=60)
  GCTGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑Cct                                                                                              >  SRR4302542.6878516/1‑92 (MQ=60)
  GCTGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑Cct                                                                                              <  SRR4302542.3234295/94‑3 (MQ=60)
   CTGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑Cctg                                                                                             <  SRR4302542.4249343/94‑4 (MQ=60)
    TGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGG                                                                                             <  SRR4302542.4646583/94‑1 (MQ=60)
    TGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGG                                                                                             >  SRR4302542.2589079/1‑94 (MQ=60)
    TGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGG                                                                                             <  SRR4302542.29571/94‑1 (MQ=60)
    TGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGG                                                                                             <  SRR4302542.4003597/94‑1 (MQ=60)
    TGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGG                                                                                             <  SRR4302542.1660463/94‑1 (MQ=60)
    TGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGG                                                                                             <  SRR4302542.646710/94‑1 (MQ=60)
     GTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGG                                                                                            <  SRR4302542.5220685/94‑1 (MQ=60)
     GTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGG                                                                                            <  SRR4302542.1235780/94‑1 (MQ=60)
      TCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGT                                                                                           <  SRR4302542.1315120/94‑1 (MQ=60)
      TCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGT                                                                                           >  SRR4302542.5981346/1‑94 (MQ=60)
      TCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGT                                                                                           >  SRR4302542.7570912/1‑94 (MQ=60)
       CCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTT                                                                                          <  SRR4302542.5217161/94‑1 (MQ=60)
       CCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTT                                                                                          <  SRR4302542.4160935/94‑1 (MQ=60)
       CCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTT                                                                                          >  SRR4302542.5953260/1‑94 (MQ=60)
       CCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTT                                                                                          <  SRR4302542.2936137/94‑1 (MQ=60)
       CCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTT                                                                                          >  SRR4302542.7323576/1‑94 (MQ=60)
        CATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTG                                                                                         >  SRR4302542.1020582/1‑94 (MQ=60)
         ATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGG                                                                                        <  SRR4302542.1121776/94‑1 (MQ=60)
          TCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGT                                                                                       >  SRR4302542.4396031/1‑94 (MQ=60)
          TCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGT                                                                                       >  SRR4302542.2753169/1‑94 (MQ=60)
          TCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCAAACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGG                                                                                       >  SRR4302542.6288900/1‑94 (MQ=60)
           CTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTT                                                                                      >  SRR4302542.7278714/1‑94 (MQ=60)
            TCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTT                                                                                     >  SRR4302542.2088653/1‑94 (MQ=60)
            TCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTT                                                                                     <  SRR4302542.4970631/94‑1 (MQ=60)
               TCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGT                                                                                  >  SRR4302542.5157335/1‑94 (MQ=60)
                 GGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGG                                                                                >  SRR4302542.1011243/1‑94 (MQ=60)
                 GGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGG                                                                                <  SRR4302542.4647411/94‑1 (MQ=60)
                 GGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGG                                                                                >  SRR4302542.510022/1‑94 (MQ=60)
                 GGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGG                                                                                >  SRR4302542.3868113/1‑94 (MQ=60)
                   TAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTG                                                                              >  SRR4302542.1139376/1‑94 (MQ=60)
                   TAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTG                                                                              >  SRR4302542.4614643/1‑94 (MQ=60)
                   TAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTG                                                                              <  SRR4302542.1664441/94‑1 (MQ=60)
                   TAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTG                                                                              <  SRR4302542.75914/94‑1 (MQ=60)
                    AGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGC                                                                             >  SRR4302542.1232385/1‑94 (MQ=60)
                    AGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGC                                                                             >  SRR4302542.3838115/1‑94 (MQ=60)
                    AGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGC                                                                             >  SRR4302542.921439/1‑94 (MQ=60)
                     GAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCA                                                                            >  SRR4302542.4913831/1‑94 (MQ=60)
                      AAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAG                                                                           <  SRR4302542.2836212/94‑1 (MQ=60)
                      AAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGATCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAG                                                                           <  SRR4302542.2544383/94‑1 (MQ=60)
                         GCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAAT                                                                        >  SRR4302542.7123296/1‑94 (MQ=60)
                         GCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAAT                                                                        <  SRR4302542.4361193/94‑1 (MQ=60)
                         GCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAAT                                                                        <  SRR4302542.7317312/94‑1 (MQ=60)
                          CGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATA                                                                       <  SRR4302542.6495141/94‑1 (MQ=60)
                          CGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATA                                                                       >  SRR4302542.3300189/1‑94 (MQ=60)
                          CGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATA                                                                       >  SRR4302542.2566438/1‑94 (MQ=60)
                          CGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATA                                                                       <  SRR4302542.5357370/94‑1 (MQ=60)
                          CGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATA                                                                       >  SRR4302542.401966/1‑94 (MQ=60)
                          CGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATA                                                                       >  SRR4302542.5104305/1‑94 (MQ=60)
                           GGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATAC                                                                      <  SRR4302542.2277843/94‑1 (MQ=60)
                           GGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATAC                                                                      >  SRR4302542.168718/1‑94 (MQ=60)
                            GAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACG                                                                     <  SRR4302542.6479275/94‑1 (MQ=60)
                            GAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACA                                                                     <  SRR4302542.6643438/94‑1 (MQ=60)
                             AATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGC                                                                    <  SRR4302542.7485714/94‑1 (MQ=60)
                             AATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGC                                                                    <  SRR4302542.2004424/94‑1 (MQ=60)
                              ATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCG                                                                   <  SRR4302542.4973587/94‑1 (MQ=60)
                              ATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCG                                                                   <  SRR4302542.168695/94‑1 (MQ=60)
                               TAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGA                                                                  >  SRR4302542.2882931/1‑94 (MQ=60)
                               TAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGA                                                                  <  SRR4302542.2790765/94‑1 (MQ=60)
                                AGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAA                                                                 >  SRR4302542.6920759/1‑94 (MQ=60)
                                AGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAA                                                                 >  SRR4302542.984294/1‑94 (MQ=60)
                                 GCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAG                                                                <  SRR4302542.6711795/94‑1 (MQ=60)
                                  CAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGC                                                               >  SRR4302542.187045/1‑94 (MQ=60)
                                  CAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGC                                                               >  SRR4302542.7550395/1‑94 (MQ=60)
                                  CAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGC                                                               <  SRR4302542.4191729/94‑1 (MQ=60)
                                    GGCGGGTTGATCCACACATAGCGGTCGCCGTTTTTTTTCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCAT                                                             <  SRR4302542.4218510/94‑1 (MQ=60)
                                     GCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATG                                                            <  SRR4302542.1703520/94‑1 (MQ=60)
                                      CGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGG                                                           <  SRR4302542.4566381/94‑1 (MQ=60)
                                      CGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGG                                                           <  SRR4302542.5564762/94‑1 (MQ=60)
                                      CGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGG                                                           <  SRR4302542.5208613/94‑1 (MQ=60)
                                      CGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGG                                                           <  SRR4302542.745033/94‑1 (MQ=60)
                                      CGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGG                                                           >  SRR4302542.6350819/1‑94 (MQ=60)
                                        GGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGC                                                         >  SRR4302542.2730236/1‑94 (MQ=60)
                                        GGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGC                                                         >  SRR4302542.4364829/1‑94 (MQ=60)
                                        GGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGC                                                         <  SRR4302542.6568269/94‑1 (MQ=60)
                                        GGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGC                                                         <  SRR4302542.3180247/94‑1 (MQ=60)
                                        GGTTGATCCACACATAGCGGTCGCCGCGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGC                                                         >  SRR4302542.2563579/1‑94 (MQ=60)
                                         GTTGATCCACACATAGCGGCCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG                                                        <  SRR4302542.5663185/94‑1 (MQ=60)
                                          TTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑T                                                      <  SRR4302542.6115323/94‑1 (MQ=60)
                                           TGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TA                                                     >  SRR4302542.2364266/1‑94 (MQ=60)
                                           TGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TA                                                     >  SRR4302542.1238113/1‑94 (MQ=60)
                                            GATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TAC                                                    <  SRR4302542.4978664/94‑1 (MQ=60)
                                             ATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACA                                                   >  SRR4302542.1793268/1‑94 (MQ=60)
                                              TCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAG                                                  <  SRR4302542.1724158/94‑1 (MQ=60)
                                              TCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAG                                                  >  SRR4302542.5366161/1‑94 (MQ=60)
                                               CCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGC                                                 >  SRR4302542.2909581/1‑94 (MQ=60)
                                                CACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCA                                                >  SRR4302542.6203681/1‑94 (MQ=60)
                                                   ACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTT                                             >  SRR4302542.5625497/1‑94 (MQ=60)
                                                    CATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTT                                            >  SRR4302542.1909119/1‑94 (MQ=60)
                                                    CATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTT                                            >  SRR4302542.5071672/1‑94 (MQ=60)
                                                     ATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTA                                           <  SRR4302542.7346845/94‑1 (MQ=60)
                                                     ATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTA                                           >  SRR4302542.3114014/1‑94 (MQ=60)
                                                     ATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTA                                           >  SRR4302542.757101/1‑94 (MQ=60)
                                                      TAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTAT                                          <  SRR4302542.5743830/94‑1 (MQ=60)
                                                      TAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTAT                                          >  SRR4302542.6454808/1‑94 (MQ=60)
                                                      TAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTAT                                          <  SRR4302542.5871515/94‑1 (MQ=60)
                                                       AGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATC                                         <  SRR4302542.2426162/94‑1 (MQ=60)
                                                       AGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATC                                         <  SRR4302542.4032232/94‑1 (MQ=60)
                                                        GCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCG                                        <  SRR4302542.1858534/94‑1 (MQ=60)
                                                        GCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCG                                        <  SRR4302542.3999336/94‑1 (MQ=60)
                                                        GCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCG                                        <  SRR4302542.5223797/94‑1 (MQ=60)
                                                        GCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCG                                        <  SRR4302542.5742499/94‑1 (MQ=60)
                                                        GCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCG                                        <  SRR4302542.1050064/94‑1 (MQ=60)
                                                        GCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCG                                        <  SRR4302542.7167460/94‑1 (MQ=60)
                                                           GTCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCC                                     <  SRR4302542.6650995/94‑1 (MQ=60)
                                                            TCGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCT                                    <  SRR4302542.4090323/94‑1 (MQ=60)
                                                             CGCCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTT                                   <  SRR4302542.6589122/94‑1 (MQ=60)
                                                             CGCCGTGTTTTTGCATCAATGCGCGGACACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTT                                   <  SRR4302542.5216680/94‑1 (MQ=60)
                                                               CCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCA                                 <  SRR4302542.3107368/94‑1 (MQ=60)
                                                               CCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCA                                 <  SRR4302542.797828/94‑1 (MQ=60)
                                                               CCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCA                                 <  SRR4302542.6123341/94‑1 (MQ=60)
                                                               CCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCA                                 >  SRR4302542.6602566/1‑94 (MQ=60)
                                                               CCGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCA                                 <  SRR4302542.3387368/94‑1 (MQ=60)
                                                                CGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCAC                                <  SRR4302542.6552469/94‑1 (MQ=60)
                                                                CGTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCAC                                >  SRR4302542.5430141/1‑94 (MQ=60)
                                                                 tgtttttttatctatgcgcggggcccagcCTGGGTTGGTTTCGTGGTGCAGAATTCCCGAAGGATGGGCGTTCCAGCACTTTATCGCCCTTCAC                                <  SRR4302542.6237246/65‑1 (MQ=39)
                                                                 GTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACT                               >  SRR4302542.4884179/1‑94 (MQ=60)
                                                                 GTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACT                               <  SRR4302542.2285191/94‑1 (MQ=60)
                                                                 GTGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACT                               <  SRR4302542.3450658/94‑1 (MQ=60)
                                                                  TGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTT                              >  SRR4302542.4975590/1‑94 (MQ=60)
                                                                  TGTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTT                              >  SRR4302542.5182088/1‑94 (MQ=60)
                                                                   GTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTT                             <  SRR4302542.163831/94‑1 (MQ=60)
                                                                   GTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTT                             >  SRR4302542.2538904/1‑94 (MQ=60)
                                                                   GTTTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTT                             <  SRR4302542.1222448/94‑1 (MQ=60)
                                                                     TTTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCT                           <  SRR4302542.5408152/94‑1 (MQ=60)
                                                                      TTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTC                          <  SRR4302542.186805/94‑1 (MQ=60)
                                                                      TTTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTC                          >  SRR4302542.5424606/1‑94 (MQ=60)
                                                                       TTGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCG                         >  SRR4302542.7184862/1‑94 (MQ=60)
                                                                        TGCATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGA                        >  SRR4302542.4621507/1‑94 (MQ=60)
                                                                           ATCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAG                     <  SRR4302542.3560294/94‑1 (MQ=60)
                                                                            TCAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGA                    <  SRR4302542.7156901/94‑1 (MQ=60)
                                                                             CAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAA                   >  SRR4302542.4538685/1‑94 (MQ=60)
                                                                             CAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAA                   >  SRR4302542.6733805/1‑94 (MQ=60)
                                                                             CAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAA                   <  SRR4302542.5034975/94‑1 (MQ=60)
                                                                             CAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAA                   <  SRR4302542.2744201/94‑1 (MQ=60)
                                                                             CAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAA                   >  SRR4302542.7221274/1‑94 (MQ=60)
                                                                             CAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAA                   <  SRR4302542.4724013/94‑1 (MQ=60)
                                                                             CAATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAA                   <  SRR4302542.7417192/94‑1 (MQ=60)
                                                                              AATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAG                  >  SRR4302542.1504857/1‑94 (MQ=60)
                                                                              AATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAG                  <  SRR4302542.7294850/94‑1 (MQ=60)
                                                                               ATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGG                 <  SRR4302542.645138/94‑1 (MQ=60)
                                                                               ATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGG                 <  SRR4302542.1294127/94‑1 (MQ=60)
                                                                               ATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGG                 <  SRR4302542.7158071/94‑1 (MQ=60)
                                                                               ATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGG                 >  SRR4302542.339352/1‑94 (MQ=60)
                                                                               ATGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGG                 <  SRR4302542.755383/94‑1 (MQ=60)
                                                                                TGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGT                >  SRR4302542.7369174/1‑94 (MQ=60)
                                                                                TGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGT                <  SRR4302542.4889285/94‑1 (MQ=60)
                                                                                TGCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGC                <  SRR4302542.2000426/94‑1 (MQ=60)
                                                                                 GCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGTATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTA               <  SRR4302542.4015689/94‑1 (MQ=60)
                                                                                 GCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTA               <  SRR4302542.4011918/94‑1 (MQ=60)
                                                                                 GCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGCA               <  SRR4302542.2080901/94‑1 (MQ=60)
                                                                                 GCGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGCA               <  SRR4302542.7048086/94‑1 (MQ=60)
                                                                                  CGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAG              <  SRR4302542.4151919/94‑1 (MQ=60)
                                                                                  CGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAG              <  SRR4302542.5117101/94‑1 (MQ=60)
                                                                                  CGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGCAG              >  SRR4302542.3210372/1‑94 (MQ=60)
                                                                                  CGCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGCAG              <  SRR4302542.7246884/94‑1 (MQ=60)
                                                                                   GCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGC             <  SRR4302542.3494946/94‑1 (MQ=60)
                                                                                   GCGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGC             <  SRR4302542.3572720/94‑1 (MQ=60)
                                                                                    CGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCA            <  SRR4302542.7598553/94‑1 (MQ=60)
                                                                                    CGGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCA            >  SRR4302542.1623474/1‑94 (MQ=60)
                                                                                     GGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAA           <  SRR4302542.4871540/94‑1 (MQ=60)
                                                                                     GGGCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAA           <  SRR4302542.6440379/94‑1 (MQ=60)
                                                                                       GCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACA         <  SRR4302542.630184/94‑1 (MQ=60)
                                                                                       GCACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACA         <  SRR4302542.5689061/94‑1 (MQ=60)
                                                                                        CACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACAC        >  SRR4302542.5265456/1‑94 (MQ=60)
                                                                                        CACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACAC        <  SRR4302542.913979/94‑1 (MQ=60)
                                                                                        CACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACAC        >  SRR4302542.4083983/1‑94 (MQ=60)
                                                                                        CACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGCAGCAACAC        >  SRR4302542.4273757/1‑94 (MQ=60)
                                                                                         ACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACACG       <  SRR4302542.3280315/94‑1 (MQ=60)
                                                                                         ACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACACG       >  SRR4302542.3766407/1‑94 (MQ=60)
                                                                                         ACAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACACG       <  SRR4302542.2298208/94‑1 (MQ=60)
                                                                                          CAGCCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGCAGCAACACGT      <  SRR4302542.4242101/94‑1 (MQ=60)
                                                                                           agcCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGCAGCAACACGTA     >  SRR4302542.4875244/4‑94 (MQ=60)
                                                                                            gcCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACACGTAG    >  SRR4302542.2378030/3‑94 (MQ=60)
                                                                                            gcCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACACGTAG    <  SRR4302542.2685176/92‑1 (MQ=60)
                                                                                            gcCTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACACGTAG    <  SRR4302542.6753473/92‑1 (MQ=60)
                                                                                            C‑CTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACACGTAGG   >  SRR4302542.7378611/1‑94 (MQ=60)
                                                                                              CTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACACGTAGGT  >  SRR4302542.4499001/1‑94 (MQ=60)
                                                                                              CTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGTAGCAACACGTAGGT  <  SRR4302542.5928029/94‑1 (MQ=60)
                                                                                              |                                                                                              
ACGCTGTCCATCTCTTCGGTAGAAAGCGGAATAGCAGGCGGGTTGATCCACACATAGCGGTCGCCGTGTTTTTGCATCAATGCGCGGGCACAG‑CTGGGTTGGTTTCGTGGTGCAGAATACGCGAAGCATGGGCG‑TACAGCACTTTATCGCCCTTCACTTTCTCGAAAGAAGGCAGCAACACGTAGGT  >  NC_000913/3158109‑3158295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑