Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,418,840 +G coding (1070/1089 nt) b3269 → putative transport system permease protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,418,8371.G99.4% 1087.1 / ‑1.5 320coding (1067/1089 nt)b3269putative transport system permease protein
Reads supporting (aligned to +/- strand):  ref base . (1/1);  new base G (161/157);  total (162/158)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.08e-01

Only 100 of 347 total aligned reads displayed.

GTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAAC  >  NC_000913/3418745‑3418924
                                                                                             |                                                                                        
gTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAc                                                                                           >  2:699927/1‑93 (MQ=255)
 tATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑g                                                                                         >  2:1455584/1‑93 (MQ=255)
  aTCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑gg                                                                                        <  2:2182764/93‑1 (MQ=255)
   tctcAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑ggg                                                                                       <  1:890876/93‑1 (MQ=255)
     tcAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑ggggc                                                                                     <  1:7177903/93‑3 (MQ=255)
     tcAACATCGTCAAAAACCCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑ggggc                                                                                     <  1:2540521/93‑3 (MQ=255)
       aaCATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑ggggcaa                                                                                   <  1:7141401/93‑5 (MQ=255)
         cATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGc                                                                                 >  2:2433196/1‑93 (MQ=255)
          aTCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGcc                                                                                >  1:836923/1‑93 (MQ=255)
           tCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCa                                                                               >  1:2775678/1‑93 (MQ=255)
           tCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCa                                                                               >  1:2311930/1‑93 (MQ=255)
            cGTCAAAACCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCAt                                                                              <  1:109588/93‑1 (MQ=255)
            cGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCAt                                                                              <  2:3323716/93‑1 (MQ=255)
            cGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCAt                                                                              <  1:2194447/93‑1 (MQ=255)
            cGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCAt                                                                              <  2:6798646/93‑1 (MQ=255)
               cAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCga                                                                           >  2:6088978/1‑93 (MQ=255)
               cAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCga                                                                           <  2:1378305/93‑1 (MQ=255)
                aaaaaCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCgag                                                                          <  1:2033545/93‑1 (MQ=255)
                 aaaaCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCgaga                                                                         >  2:5350865/1‑93 (MQ=255)
                   aaCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACg                                                                       >  1:5211026/1‑93 (MQ=255)
                     ctcctcTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGAt                                                                     <  1:6132209/93‑1 (MQ=255)
                     ctcctcTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGAt                                                                     <  2:668849/93‑1 (MQ=255)
                       cctcTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAg                                                                   >  2:7323024/1‑93 (MQ=255)
                             ttGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGa                                                             >  2:5671989/1‑93 (MQ=255)
                               gccgccGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGAcc                                                           <  2:4458684/93‑1 (MQ=255)
                               gccgccGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGAcc                                                           >  1:6019731/1‑93 (MQ=255)
                                cggccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCa                                                          <  1:2427012/91‑1 (MQ=255)
                                 cgccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCAt                                                         >  1:2094102/1‑93 (MQ=255)
                                 cgccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGGACAAGCCATCGAGACGATAGCCATGACCAt                                                         <  2:6286989/93‑1 (MQ=255)
                                   ccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGt                                                       <  2:2577022/93‑1 (MQ=255)
                                   ccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGt                                                       >  2:2304991/1‑93 (MQ=255)
                                   ccgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGt                                                       >  2:5134538/1‑93 (MQ=255)
                                    cgcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTc                                                      >  1:5469193/1‑93 (MQ=255)
                                     gcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCg                                                     >  1:4732177/1‑93 (MQ=255)
                                     gcTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCg                                                     <  1:5540210/93‑1 (MQ=255)
                                       tATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGt                                                   >  1:2717998/1‑93 (MQ=255)
                                       tATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGt                                                   >  2:3158192/1‑93 (MQ=255)
                                        aTTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTc                                                  <  1:6327984/93‑1 (MQ=255)
                                            gatATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATc                                              <  2:1560710/91‑1 (MQ=255)
                                              tATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTg                                            <  1:3082461/93‑1 (MQ=255)
                                               aTCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGa                                           <  1:286018/93‑1 (MQ=255)
                                               aTCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAACCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGa                                           <  1:6211877/93‑1 (MQ=255)
                                                tCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAt                                          >  1:3368891/1‑93 (MQ=255)
                                                tCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAt                                          <  2:4801619/93‑1 (MQ=255)
                                                 cccGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAtt                                         <  2:1758991/93‑1 (MQ=255)
                                                  ccGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTa                                        >  1:5354167/1‑93 (MQ=255)
                                                   cGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTAt                                       <  1:1126913/93‑1 (MQ=255)
                                                    gATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATc                                      >  2:3571080/1‑93 (MQ=255)
                                                    gATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATc                                      <  2:5981122/93‑1 (MQ=255)
                                                     atagGGTTTCGCTGTTTGCCGGCCCCGGGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCa                                     <  1:2394082/93‑1 (MQ=255)
                                                      tatGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAg                                    <  2:6490024/93‑1 (MQ=255)
                                                      tatGGTTTCGCCGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAg                                    >  1:3570066/1‑93 (MQ=255)
                                                       atGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGc                                   >  2:5887022/1‑93 (MQ=255)
                                                       atGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGc                                   >  2:210074/1‑93 (MQ=255)
                                                       atGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGc                                   >  2:741650/1‑93 (MQ=255)
                                                        tGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGcc                                  >  2:762278/1‑93 (MQ=255)
                                                        tGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGcc                                  <  2:2866109/93‑1 (MQ=255)
                                                         ggTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCt                                 <  2:4167342/93‑1 (MQ=255)
                                                         ggTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCt                                 >  1:3772625/1‑93 (MQ=255)
                                                          gTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTg                                >  2:2789126/1‑93 (MQ=255)
                                                            ttCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGAc                              >  2:5327154/1‑93 (MQ=255)
                                                             tCGCTGTTTGCCGGCACCTTGCTGAACCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTTTATCTGATTATCAGCCTGACt                             <  1:4572359/93‑1 (MQ=255)
                                                             tCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACt                             >  2:4580532/1‑93 (MQ=255)
                                                             tCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACt                             >  2:6385637/1‑93 (MQ=255)
                                                              cGCTGTTTGCCGGCCCCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTa                            <  1:1659635/93‑1 (MQ=255)
                                                              cGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTa                            >  1:3027693/1‑93 (MQ=255)
                                                                cTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtc                          <  1:5649770/93‑1 (MQ=255)
                                                                cTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtc                          >  2:1012743/1‑93 (MQ=255)
                                                                 tGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtct                         >  1:4357195/1‑93 (MQ=255)
                                                                 tGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtct                         >  1:267798/1‑93 (MQ=255)
                                                                 tGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtct                         >  1:137711/1‑93 (MQ=255)
                                                                  gTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAtctc                        <  1:428536/93‑1 (MQ=255)
                                                                   tttGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCg                       >  1:1303991/1‑93 (MQ=255)
                                                                   tttGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCg                       >  1:767387/1‑93 (MQ=255)
                                                                   tttGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCg                       >  1:1568492/1‑93 (MQ=255)
                                                                     tGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCgct                     <  1:1230185/93‑1 (MQ=255)
                                                                       ccGGCGCCGTGCTAAACCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCgctgc                   <  1:6494480/93‑1 (MQ=255)
                                                                        cGGCCCCGTGCTGAACCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCgctgct                  <  1:483236/93‑1 (MQ=255)
                                                                         ggCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGctgctg                 >  2:7185858/1‑93 (MQ=255)
                                                                          gCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCtga                >  2:4851956/1‑93 (MQ=255)
                                                                           cACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCtgat               >  2:4114586/1‑93 (MQ=255)
                                                                           cACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCtgat               <  2:5035534/93‑1 (MQ=255)
                                                                            aCCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCtgatg              >  2:3043547/1‑93 (MQ=255)
                                                                             ccGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCtgatga             >  1:5869518/1‑93 (MQ=255)
                                                                              cGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGaa            <  2:880424/93‑1 (MQ=255)
                                                                              cGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGaa            <  1:385898/93‑1 (MQ=255)
                                                                              cGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGaa            <  2:4970258/93‑1 (MQ=255)
                                                                              cGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGaa            >  2:3477294/1‑93 (MQ=255)
                                                                               gTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAat           <  1:4481874/93‑1 (MQ=255)
                                                                               gTGCTGAATCAGAC‑GGGTCAAGCCATCGAGACGATAGCCATGACCATGTTGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAat           >  1:1859784/1‑93 (MQ=255)
                                                                                tGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGCata          <  1:6969517/93‑1 (MQ=255)
                                                                                tGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAata          >  1:868217/1‑93 (MQ=255)
                                                                                tGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAata          <  2:1164270/93‑1 (MQ=255)
                                                                                tGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAata          <  1:5745109/93‑1 (MQ=255)
                                                                                tGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAata          >  1:2807851/1‑93 (MQ=255)
                                                                                  cTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATc        <  1:3940635/93‑1 (MQ=255)
                                                                                    gAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCta      >  2:5494272/1‑93 (MQ=255)
                                                                                    gAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCta      <  2:3958013/93‑1 (MQ=255)
                                                                                     aaTCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCtat     <  1:1045024/93‑1 (MQ=255)
                                                                                       tCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATaa   >  2:4293380/1‑93 (MQ=255)
                                                                                             |                                                                                        
GTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAAC  >  NC_000913/3418745‑3418924

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCAT  >  NC_000913/3418747‑3418932
                                                                                              |                                                                                             
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGG                                                                                               >  SRR4302542.2789164/1‑94 (MQ=60)
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGG                                                                                               <  SRR4302542.6289741/94‑1 (MQ=60)
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCCGAATCAGAC‑GGG                                                                                               >  SRR4302542.183987/1‑94 (MQ=60)
ATCACAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑AGG                                                                                               <  SRR4302542.91845/94‑1 (MQ=60)
 TCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGG‑G                                                                                             <  SRR4302542.898596/94‑1 (MQ=60)
  CTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGGgc                                                                                             <  SRR4302542.2173519/94‑3 (MQ=60)
  CTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGGgc                                                                                             <  SRR4302542.3825268/94‑3 (MQ=60)
  CTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCACGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGGgc                                                                                             <  SRR4302542.3103445/94‑3 (MQ=60)
   TCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGGgca                                                                                            >  SRR4302542.6268003/1‑91 (MQ=60)
   TCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGGgca                                                                                            <  SRR4302542.7248311/94‑4 (MQ=60)
   TCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGGgca                                                                                            <  SRR4302542.5277769/94‑4 (MQ=60)
   TCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGGgca                                                                                            >  SRR4302542.2475638/1‑91 (MQ=60)
   TCAACATCGTCAAAAACCCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGGgca                                                                                            <  SRR4302542.2565150/94‑4 (MQ=60)
    CAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAA                                                                                           >  SRR4302542.1131678/1‑94 (MQ=60)
     AACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAG                                                                                          <  SRR4302542.7211483/94‑1 (MQ=60)
      ACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGC                                                                                         <  SRR4302542.6129701/94‑1 (MQ=60)
      ACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGC                                                                                         <  SRR4302542.6319316/94‑1 (MQ=60)
       CATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCC                                                                                        >  SRR4302542.877798/1‑94 (MQ=60)
       CATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCC                                                                                        >  SRR4302542.2390697/1‑94 (MQ=60)
       CATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCC                                                                                        >  SRR4302542.5740803/1‑94 (MQ=60)
       CATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCC                                                                                        >  SRR4302542.844154/1‑94 (MQ=60)
        ATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGTTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCA                                                                                       >  SRR4302542.2438867/1‑94 (MQ=60)
        ATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCA                                                                                       >  SRR4302542.2331782/1‑94 (MQ=60)
        ATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCA                                                                                       >  SRR4302542.3533572/1‑94 (MQ=60)
        ATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCA                                                                                       >  SRR4302542.2802410/1‑94 (MQ=60)
        ATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCA                                                                                       >  SRR4302542.4683712/1‑94 (MQ=60)
          CGTCAAAACCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATC                                                                                     <  SRR4302542.110486/94‑1 (MQ=60)
          CGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATC                                                                                     <  SRR4302542.2213348/94‑1 (MQ=60)
             CAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAG                                                                                  >  SRR4302542.6401732/1‑94 (MQ=60)
              AAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGA                                                                                 <  SRR4302542.2051135/94‑1 (MQ=60)
              AAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGA                                                                                 >  SRR4302542.2455226/1‑94 (MQ=60)
              AAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGA                                                                                 >  SRR4302542.1334721/1‑94 (MQ=60)
               AAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGAC                                                                                <  SRR4302542.1268703/94‑1 (MQ=60)
                AACCTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACG                                                                               <  SRR4302542.2742348/94‑1 (MQ=60)
                AAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGCCGGGG‑CAAGCCATCGAGACG                                                                               <  SRR4302542.6089079/94‑1 (MQ=60)
                AAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACG                                                                               >  SRR4302542.5261703/1‑94 (MQ=60)
                   CTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATA                                                                            >  SRR4302542.1117666/1‑94 (MQ=60)
                   CTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATA                                                                            <  SRR4302542.6191530/94‑1 (MQ=60)
                   CTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATA                                                                            >  SRR4302542.1713704/1‑94 (MQ=60)
                   CTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTACGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATA                                                                            >  SRR4302542.6276069/1‑94 (MQ=60)
                   CTCCTCTCTCGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATA                                                                            <  SRR4302542.3363116/94‑1 (MQ=60)
                   CCCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATA                                                                            <  SRR4302542.3917278/94‑1 (MQ=60)
                   CCCCTCTCTGGCCGCCTCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATA                                                                            <  SRR4302542.2829429/94‑1 (MQ=60)
                    TCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAG                                                                           >  SRR4302542.1153624/1‑94 (MQ=60)
                    TCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAG                                                                           >  SRR4302542.300485/1‑94 (MQ=60)
                    TCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAG                                                                           <  SRR4302542.986526/94‑1 (MQ=60)
                    TCCTCGCTGGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAG                                                                           <  SRR4302542.7210256/94‑1 (MQ=60)
                    CCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAG                                                                           <  SRR4302542.7210257/94‑1 (MQ=60)
                     CCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGC                                                                          >  SRR4302542.819364/1‑94 (MQ=60)
                      CTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCC                                                                         >  SRR4302542.4376136/1‑94 (MQ=60)
                      CTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCC                                                                         >  SRR4302542.4421480/1‑94 (MQ=60)
                        CTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCAT                                                                       <  SRR4302542.593494/94‑1 (MQ=60)
                        CTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCAT                                                                       >  SRR4302542.1618795/1‑94 (MQ=60)
                         TCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATG                                                                      >  SRR4302542.5265663/1‑94 (MQ=60)
                          CTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGA                                                                     >  SRR4302542.5397303/1‑94 (MQ=60)
                           TTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGAC                                                                    <  SRR4302542.2822045/94‑1 (MQ=60)
                            TGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACC                                                                   >  SRR4302542.6078031/1‑94 (MQ=60)
                             GCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCA                                                                  <  SRR4302542.5646731/94‑1 (MQ=60)
                             GCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCA                                                                  >  SRR4302542.2102677/1‑94 (MQ=60)
                              CGGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCAT                                                                 <  SRR4302542.2450615/94‑1 (MQ=60)
                              CCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCAT                                                                 >  SRR4302542.6519900/1‑94 (MQ=60)
                              CCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCAT                                                                 <  SRR4302542.4814307/94‑1 (MQ=60)
                              CCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCAT                                                                 >  SRR4302542.2112166/1‑94 (MQ=60)
                              CCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCAT                                                                 <  SRR4302542.2049411/94‑1 (MQ=60)
                               CGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCCCCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATG                                                                <  SRR4302542.2526768/94‑1 (MQ=60)
                                GCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGT                                                               <  SRR4302542.1323345/94‑1 (MQ=60)
                                GCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGT                                                               >  SRR4302542.1413581/1‑94 (MQ=60)
                                GCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGT                                                               <  SRR4302542.2955218/94‑1 (MQ=60)
                                 CCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTC                                                              >  SRR4302542.5522322/1‑94 (MQ=60)
                                  CGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCG                                                             <  SRR4302542.7211603/94‑1 (MQ=60)
                                  CGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCG                                                             >  SRR4302542.848512/1‑94 (MQ=60)
                                  CGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCG                                                             >  SRR4302542.4778322/1‑94 (MQ=60)
                                   GCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGG                                                            <  SRR4302542.5594063/94‑1 (MQ=60)
                                    CTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGT                                                           >  SRR4302542.2799167/1‑94 (MQ=60)
                                    CTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGT                                                           >  SRR4302542.2298958/1‑94 (MQ=60)
                                    CTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGT                                                           >  SRR4302542.4834815/1‑94 (MQ=60)
                                    CTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGT                                                           >  SRR4302542.2744210/1‑94 (MQ=60)
                                     TATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTC                                                          <  SRR4302542.2069081/94‑1 (MQ=60)
                                     TATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTC                                                          >  SRR4302542.6787769/1‑94 (MQ=60)
                                      ATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCT                                                         <  SRR4302542.6390336/94‑1 (MQ=60)
                                      ATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCT                                                         <  SRR4302542.2417702/94‑1 (MQ=60)
                                      ATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCT                                                         >  SRR4302542.857145/1‑94 (MQ=60)
                                       TTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTA                                                        <  SRR4302542.1992323/94‑1 (MQ=60)
                                       TTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTA                                                        <  SRR4302542.4506118/94‑1 (MQ=60)
                                        TGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTAT                                                       >  SRR4302542.2410487/1‑94 (MQ=60)
                                         GGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATC                                                      <  SRR4302542.2201737/94‑1 (MQ=60)
                                         GGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATC                                                      >  SRR4302542.7376826/1‑94 (MQ=60)
                                          GCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCT                                                     <  SRR4302542.6469516/94‑1 (MQ=60)
                                           CTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTG                                                    <  SRR4302542.5433191/94‑1 (MQ=60)
                                           CTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTG                                                    >  SRR4302542.4646787/1‑94 (MQ=60)
                                           CTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTG                                                    >  SRR4302542.2781859/1‑94 (MQ=60)
                                            TATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGA                                                   >  SRR4302542.1564900/1‑94 (MQ=60)
                                            TATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGA                                                   <  SRR4302542.3111807/94‑1 (MQ=60)
                                            TATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGA                                                   >  SRR4302542.354069/1‑94 (MQ=60)
                                            TATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGA                                                   <  SRR4302542.4364792/94‑1 (MQ=60)
                                             ATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAT                                                  <  SRR4302542.892260/94‑1 (MQ=60)
                                             ATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAT                                                  <  SRR4302542.288509/94‑1 (MQ=60)
                                             ATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAT                                                  >  SRR4302542.3400523/1‑94 (MQ=60)
                                             ATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAACCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGAT                                                  <  SRR4302542.6273080/94‑1 (MQ=60)
                                              TCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATT                                                 <  SRR4302542.5823221/94‑1 (MQ=60)
                                              TCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATT                                                 >  SRR4302542.610548/1‑94 (MQ=60)
                                              TCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATT                                                 <  SRR4302542.841942/94‑1 (MQ=60)
                                               CCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTA                                                >  SRR4302542.1208311/1‑94 (MQ=60)
                                               CCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTA                                                >  SRR4302542.5406195/1‑94 (MQ=60)
                                                CCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTAT                                               >  SRR4302542.7228713/1‑94 (MQ=60)
                                                 CGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATC                                              >  SRR4302542.3683786/1‑94 (MQ=60)
                                                 CGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATC                                              <  SRR4302542.5568147/94‑1 (MQ=60)
                                                 CGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATC                                              <  SRR4302542.5568145/94‑1 (MQ=60)
                                                 CGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATC                                              <  SRR4302542.1136535/94‑1 (MQ=60)
                                                  GATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCA                                             >  SRR4302542.3460555/1‑94 (MQ=60)
                                                  GATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCA                                             <  SRR4302542.411729/94‑1 (MQ=60)
                                                   ATATGGTTTCGCCGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAG                                            >  SRR4302542.3603387/1‑94 (MQ=60)
                                                   ATAGGGTTTCGCTGTTTGCCGGCCCCGGGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAG                                            <  SRR4302542.2417021/94‑1 (MQ=60)
                                                    TATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGC                                           <  SRR4302542.2862163/94‑1 (MQ=60)
                                                    TATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGC                                           <  SRR4302542.1607565/94‑1 (MQ=60)
                                                     ATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCC                                          <  SRR4302542.1926448/94‑1 (MQ=60)
                                                     ATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCC                                          >  SRR4302542.4712580/1‑94 (MQ=60)
                                                      TGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCT                                         <  SRR4302542.1241961/94‑1 (MQ=60)
                                                      TGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCT                                         >  SRR4302542.3809939/1‑94 (MQ=60)
                                                         TTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGAC                                      >  SRR4302542.4162958/1‑94 (MQ=60)
                                                         TTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGAC                                      <  SRR4302542.3862971/94‑1 (MQ=60)
                                                          TTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACT                                     <  SRR4302542.7514387/94‑1 (MQ=60)
                                                           TCGCTGTTTGCCGGCACCTTGCTGAACCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTTTATCTGATTATCAGCCTGACTA                                    <  SRR4302542.4617102/94‑1 (MQ=60)
                                                           TCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTA                                    <  SRR4302542.4617101/94‑1 (MQ=60)
                                                           TCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTA                                    >  SRR4302542.3056592/1‑94 (MQ=60)
                                                            CGCTGTTTGCCGGCCCCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                   <  SRR4302542.1673969/94‑1 (MQ=60)
                                                            CGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                   <  SRR4302542.284560/94‑1 (MQ=60)
                                                            CGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTAT                                   >  SRR4302542.49593/1‑94 (MQ=60)
                                                              CTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCT                                 >  SRR4302542.138860/1‑94 (MQ=60)
                                                              CTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCT                                 <  SRR4302542.5704627/94‑1 (MQ=60)
                                                              CTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCT                                 <  SRR4302542.3842657/94‑1 (MQ=60)
                                                              CTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCT                                 >  SRR4302542.4399993/1‑94 (MQ=60)
                                                              CTGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCT                                 >  SRR4302542.270080/1‑94 (MQ=60)
                                                              CTGTTTGCCGCAACGGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCT                                 <  SRR4302542.2573904/94‑1 (MQ=60)
                                                               TGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTC                                >  SRR4302542.2723795/1‑94 (MQ=60)
                                                               TGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTC                                >  SRR4302542.6249288/1‑94 (MQ=60)
                                                               TGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTC                                <  SRR4302542.6267857/94‑1 (MQ=60)
                                                               TGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTC                                >  SRR4302542.5435451/1‑94 (MQ=60)
                                                               TGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTC                                >  SRR4302542.3754604/1‑94 (MQ=60)
                                                               TGTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTC                                >  SRR4302542.876673/1‑94 (MQ=60)
                                                                GTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCG                               <  SRR4302542.5747642/94‑1 (MQ=60)
                                                                GTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCG                               >  SRR4302542.1582034/1‑94 (MQ=60)
                                                                GTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCG                               <  SRR4302542.432240/94‑1 (MQ=60)
                                                                GTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCG                               <  SRR4302542.1199039/94‑1 (MQ=60)
                                                                GTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCG                               >  SRR4302542.774031/1‑94 (MQ=60)
                                                                GTTTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCG                               >  SRR4302542.1315218/1‑94 (MQ=60)
                                                                  TTGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCT                             <  SRR4302542.507696/94‑1 (MQ=60)
                                                                   TGCCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTG                            <  SRR4302542.1240765/94‑1 (MQ=60)
                                                                     CCGGCGCCGTGCTAAACCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCT                          <  SRR4302542.6558478/94‑1 (MQ=60)
                                                                     CCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCT                          >  SRR4302542.6698305/1‑94 (MQ=60)
                                                                     CCGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCT                          <  SRR4302542.3959054/94‑1 (MQ=60)
                                                                      CGGCCCCGTGCTGAACCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTG                         <  SRR4302542.487424/94‑1 (MQ=60)
                                                                      CGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTG                         >  SRR4302542.555424/1‑94 (MQ=60)
                                                                      CGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTG                         >  SRR4302542.7148709/1‑94 (MQ=60)
                                                                      CGGCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTG                         >  SRR4302542.5706609/1‑94 (MQ=60)
                                                                        GCACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGAT                       <  SRR4302542.6049451/94‑1 (MQ=60)
                                                                         CACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATG                      <  SRR4302542.288337/94‑1 (MQ=60)
                                                                          ACCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGA                     >  SRR4302542.5926414/1‑94 (MQ=60)
                                                                           CCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAA                    >  SRR4302542.3086407/1‑94 (MQ=60)
                                                                           CCGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAA                    >  SRR4302542.748884/1‑94 (MQ=60)
                                                                            CGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAAT                   <  SRR4302542.105932/94‑1 (MQ=60)
                                                                            CGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAAT                   <  SRR4302542.1078065/94‑1 (MQ=60)
                                                                            CGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAAT                   <  SRR4302542.4582850/94‑1 (MQ=60)
                                                                            CGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAAT                   >  SRR4302542.4022730/1‑94 (MQ=60)
                                                                            CGTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAAT                   <  SRR4302542.389247/94‑1 (MQ=60)
                                                                            CGTGCTGAATCAGAC‑GGGTCAAGCCATCGAGACGATAGCCATGACCATGTTGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAAT                   >  SRR4302542.1875853/1‑94 (MQ=60)
                                                                             GTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATA                  >  SRR4302542.2834883/1‑94 (MQ=60)
                                                                             GTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATA                  >  SRR4302542.3076479/1‑94 (MQ=60)
                                                                             GTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATA                  <  SRR4302542.4525871/94‑1 (MQ=60)
                                                                             GTGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATA                  >  SRR4302542.875703/1‑94 (MQ=60)
                                                                              TGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGCATAT                 <  SRR4302542.7037981/94‑1 (MQ=60)
                                                                              TGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATAT                 <  SRR4302542.5800884/94‑1 (MQ=60)
                                                                              TGCTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATAT                 <  SRR4302542.2227451/94‑1 (MQ=60)
                                                                                CTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCT               >  SRR4302542.2388645/1‑94 (MQ=60)
                                                                                CTGAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCT               <  SRR4302542.3979560/94‑1 (MQ=60)
                                                                                  GAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTAT             <  SRR4302542.5665031/94‑1 (MQ=60)
                                                                                  GAATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTAT             <  SRR4302542.2609771/94‑1 (MQ=60)
                                                                                   AATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATA            <  SRR4302542.2123705/94‑1 (MQ=60)
                                                                                   AATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATA            <  SRR4302542.160101/94‑1 (MQ=60)
                                                                                   AATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATA            <  SRR4302542.1053990/94‑1 (MQ=60)
                                                                                   AATCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATA            <  SRR4302542.5813123/94‑1 (MQ=60)
                                                                                     TCAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAAC          <  SRR4302542.1375087/94‑1 (MQ=60)
                                                                                      CAGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACC         <  SRR4302542.3166964/94‑1 (MQ=60)
                                                                                       AGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCG        >  SRR4302542.3546818/1‑94 (MQ=60)
                                                                                       AGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCG        >  SRR4302542.921546/1‑94 (MQ=60)
                                                                                       AGACGGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCG        >  SRR4302542.5975379/1‑94 (MQ=60)
                                                                                         acgGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCC      <  SRR4302542.7364861/91‑1 (MQ=60)
                                                                                         acgGGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCC      <  SRR4302542.704071/91‑1 (MQ=60)
                                                                                          G‑GGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGC    <  SRR4302542.2262625/94‑1 (MQ=60)
                                                                                             GG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCAT  <  SRR4302542.4067529/94‑1 (MQ=60)
                                                                                             GG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCAT  >  SRR4302542.4681298/1‑94 (MQ=60)
                                                                                              |                                                                                             
ATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGAC‑GGG‑CAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCAT  >  NC_000913/3418747‑3418932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑