Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,682,619	A→G	R199R (CGT→CGC)	yhjK ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,682,619	0	A	G	82.5%	672.6 / 146.1	319	R199R (CGT→CGC)	yhjK	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (27/29); new base G (130/133); total (157/162)
Fisher's exact test for biased strand distribution p-value = 8.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01

Only 100 of 323 total aligned reads displayed.

TTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGC  >  NC_000913/3682527‑3682710

ttttCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGgaga                                                                                             <  1:6967963/93‑1 (MQ=255)

  ttCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGcg                                                                                           <  1:4786054/93‑1 (MQ=255)

    cGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGcgcg                                                                                         <  1:3382126/93‑1 (MQ=255)

    cGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGcgcg                                                                                         >  1:6885873/1‑93 (MQ=255)

      ttctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGt                                                                                       >  2:854502/1‑93 (MQ=255)

        ctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTaa                                                                                     <  2:7132035/93‑1 (MQ=255)

        ctgttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTaa                                                                                     <  1:5282224/93‑1 (MQ=255)

          gttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATg                                                                                   >  2:1233517/1‑93 (MQ=255)

          gttctTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATg                                                                                   >  2:4497123/1‑93 (MQ=255)

           ttcttcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGc                                                                                  <  2:6865848/93‑1 (MQ=255)

           ttcttcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGc                                                                                  >  1:4607600/1‑93 (MQ=255)

            tcttcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGcc                                                                                 >  1:7232422/1‑93 (MQ=255)

            tcttcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGcc                                                                                 <  1:828944/93‑1 (MQ=255)

             cttcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCa                                                                                >  2:3618450/1‑93 (MQ=255)

             cttcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCa                                                                                <  1:4005796/93‑1 (MQ=255)

             cttcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCa                                                                                >  1:5497333/1‑93 (MQ=255)

              ttcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAg                                                                               >  1:5197940/1‑93 (MQ=255)

              ttcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAg                                                                               >  1:2411027/1‑93 (MQ=255)

               tcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGt                                                                              <  2:455236/93‑1 (MQ=255)

               tcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGt                                                                              >  2:4705466/1‑93 (MQ=255)

               tcATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGt                                                                              <  2:636303/93‑1 (MQ=255)

                 aTAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAACGCCAGTTg                                                                            <  1:2567743/93‑1 (MQ=255)

                  tAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTgg                                                                           >  1:3017032/1‑93 (MQ=255)

                    aTGGCGCTGCAGCATTTGCTGGTGAAGGTTGAAACTGCGCACCAAAATACCGTTTTCACCGTCCGGAGGCAGGCGCGGTAATGCCAGTTGGTg                                                                         <  1:6154859/93‑1 (MQ=255)

                       gcgcTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGAcc                                                                      >  2:1970142/1‑93 (MQ=255)

                         gcTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACcaa                                                                    <  2:1542606/93‑1 (MQ=255)

                          cTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACcaac                                                                   <  1:3245266/93‑1 (MQ=255)

                          cTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACcaac                                                                   >  1:2851707/1‑93 (MQ=255)

                          cTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACcaac                                                                   >  1:5406405/1‑93 (MQ=255)

                           tGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACcaaca                                                                  <  1:3742273/93‑1 (MQ=255)

                            gcagcaATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGATAATGCCAGTTGGTGACcaacaa                                                                 >  2:6971745/1‑93 (MQ=255)

                              agcaATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGc                                                               <  1:2713922/93‑1 (MQ=255)

                                caATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTc                                                             <  1:1249706/93‑1 (MQ=255)

                                 aaTTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTcc                                                            <  2:3454000/93‑1 (MQ=255)

                                 aaTTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTcc                                                            >  2:2254352/1‑93 (MQ=255)

                                 aaTTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTcc                                                            >  2:1143902/1‑93 (MQ=255)

                                  aTTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCt                                                           <  1:2146016/93‑1 (MQ=255)

                                  aTTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCt                                                           >  1:5920957/1‑93 (MQ=255)

                                  aTTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCt                                                           <  2:4120815/93‑1 (MQ=255)

                                  aTTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCt                                                           <  2:2380455/93‑1 (MQ=255)

                                   ttGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCtt                                                          >  1:4365638/1‑93 (MQ=255)

                                    tGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTg                                                         >  2:4445442/1‑93 (MQ=255)

                                     gCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTgg                                                        >  2:7055748/1‑93 (MQ=255)

                                     gCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTgg                                                        >  2:4954860/1‑93 (MQ=255)

                                     gCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTgg                                                        <  1:1947684/93‑1 (MQ=255)

                                       tGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCt                                                      >  2:2970654/1‑93 (MQ=255)

                                         gTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTgg                                                    <  1:4561702/93‑1 (MQ=255)

                                         gTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTgg                                                    >  2:1377250/1‑93 (MQ=255)

                                          ttGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTggg                                                   >  1:3686792/1‑93 (MQ=255)

                                           tGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGa                                                  <  2:3079019/93‑1 (MQ=255)

                                           tGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGa                                                  <  2:624379/93‑1 (MQ=255)

                                            gAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGAt                                                 <  2:5580169/93‑1 (MQ=255)

                                            gAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGAt                                                 >  1:3077518/1‑93 (MQ=255)

                                             aGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATg                                                <  2:5117746/93‑1 (MQ=255)

                                             aGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATg                                                <  1:6582485/93‑1 (MQ=255)

                                             aGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATg                                                <  1:173962/93‑1 (MQ=255)

                                               gTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGc                                              <  2:504185/93‑1 (MQ=255)

                                               gTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGc                                              <  2:2525938/93‑1 (MQ=255)

                                                ttGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCg                                             >  1:6698807/1‑93 (MQ=255)

                                                ttGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCg                                             >  2:42782/1‑93 (MQ=255)

                                                ttGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCg                                             <  1:1322671/93‑1 (MQ=255)

                                                 tGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCGTTGGCTGGGATGGCGt                                            <  2:5802989/93‑1 (MQ=255)

                                                   tAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTa                                          <  2:5648713/93‑1 (MQ=255)

                                                   tAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGCGACCAACAAGCTCCTTGGCTGGGATGGCGTTa                                          <  1:115150/93‑1 (MQ=255)

                                                    aaCTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTaa                                         <  2:5385827/93‑1 (MQ=255)

                                                     aCTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAg                                        <  1:1390306/93‑1 (MQ=255)

                                                       tGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGtt                                      <  1:3527058/93‑1 (MQ=255)

                                                          gcACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTcgc                                   <  2:2744069/93‑1 (MQ=255)

                                                          gcACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTcgc                                   >  1:5670755/1‑93 (MQ=255)

                                                          gcACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTcgc                                   <  2:725081/93‑1 (MQ=255)

                                                             ccAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAg                                >  2:5967774/1‑93 (MQ=255)

                                                             ccAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAg                                <  1:3870660/93‑1 (MQ=255)

                                                              cAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGc                               >  2:6474517/1‑93 (MQ=255)

                                                              cAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGc                               >  1:3581965/1‑93 (MQ=255)

                                                               aaCATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCa                              <  2:6767124/93‑1 (MQ=255)

                                                                aCATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCaa                             >  1:2251757/1‑93 (MQ=255)

                                                                aCATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCaa                             <  2:5754292/93‑1 (MQ=255)

                                                                 cATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAat                            >  2:328476/1‑93 (MQ=255)

                                                                 cATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAat                            <  1:6065572/93‑1 (MQ=255)

                                                                  aTACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAata                           <  1:5815943/93‑1 (MQ=255)

                                                                   tACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAatat                          >  1:6423604/1‑93 (MQ=255)

                                                                     ccGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTg                        >  2:5486868/1‑93 (MQ=255)

                                                                      cGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGc                       >  1:874854/1‑93 (MQ=255)

                                                                       gATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCg                      >  1:5098191/1‑93 (MQ=255)

                                                                        aTTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGt                     >  2:566471/1‑93 (MQ=255)

                                                                        aTTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGt                     >  2:7475485/1‑93 (MQ=255)

                                                                         tttCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTa                    >  1:2641170/1‑93 (MQ=255)

                                                                         tttCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTa                    >  2:5702821/1‑93 (MQ=255)

                                                                         tttCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTa                    <  2:1858073/93‑1 (MQ=255)

                                                                           tCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAAc                  <  1:3363608/93‑1 (MQ=255)

                                                                              tCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGa               <  1:7419761/93‑1 (MQ=255)

                                                                               cGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGAt              <  2:244058/93‑1 (MQ=255)

                                                                                gTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATg             >  2:5901516/1‑93 (MQ=255)

                                                                                  ccTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCa           <  1:4315720/93‑1 (MQ=255)

                                                                                     gATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCaann        >  1:1808233/1‑91 (MQ=255)

                                                                                     gATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCaaaa        <  1:3178859/93‑1 (MQ=255)

                                                                                     gATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCaaaa        <  1:3495145/93‑1 (MQ=255)

                                                                                     gATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCaaaa        >  2:4312337/1‑93 (MQ=255)

                                                                                       tGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATc      <  2:1729907/93‑1 (MQ=255)

                                                                                           gACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGc  <  2:4026335/93‑1 (MQ=255)

TTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGC  >  NC_000913/3682527‑3682710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGCG  >  NC_000913/3682526‑3682711

ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGG                                                                                              >  SRR4302542.1778515/1‑94 (MQ=60)

ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGG                                                                                              >  SRR4302542.7244215/1‑94 (MQ=60)

ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGG                                                                                              >  SRR4302542.711018/1‑94 (MQ=60)

ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGG                                                                                              >  SRR4302542.2713702/1‑94 (MQ=60)

ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGG                                                                                              >  SRR4302542.5993594/1‑94 (MQ=60)

 TTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGGAGAC                                                                                             <  SRR4302542.7036417/94‑1 (MQ=60)

 TTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGC                                                                                             >  SRR4302542.2936045/1‑94 (MQ=60)

  TTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCG                                                                                            <  SRR4302542.4572437/94‑1 (MQ=60)

   TTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGC                                                                                           >  SRR4302542.2606210/1‑94 (MQ=60)

   TTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGC                                                                                           <  SRR4302542.4832699/94‑1 (MQ=60)

   TTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGC                                                                                           >  SRR4302542.4834404/1‑94 (MQ=60)

    TCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCG                                                                                          >  SRR4302542.6953507/1‑94 (MQ=60)

    TCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCG                                                                                          <  SRR4302542.1308247/94‑1 (MQ=60)

     CGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGG                                                                                         <  SRR4302542.3413891/94‑1 (MQ=60)

     CGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGG                                                                                         <  SRR4302542.2350399/94‑1 (MQ=60)

      GTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGT                                                                                        >  SRR4302542.2471590/1‑94 (MQ=60)

      GTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGT                                                                                        >  SRR4302542.5059734/1‑94 (MQ=60)

       TTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTA                                                                                       >  SRR4302542.3576004/1‑94 (MQ=60)

       TTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTA                                                                                       >  SRR4302542.1164213/1‑94 (MQ=60)

       TTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTA                                                                                       >  SRR4302542.5973509/1‑94 (MQ=60)

       TTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTA                                                                                       >  SRR4302542.6373077/1‑94 (MQ=60)

        TCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAA                                                                                      >  SRR4302542.1790135/1‑94 (MQ=60)

        TCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAA                                                                                      >  SRR4302542.3482603/1‑94 (MQ=60)

        TCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAA                                                                                      >  SRR4302542.3182250/1‑94 (MQ=60)

         CTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAAT                                                                                     <  SRR4302542.5333583/94‑1 (MQ=60)

         CTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAAT                                                                                     >  SRR4302542.1308385/1‑94 (MQ=60)

         CTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAAAATACCGATTTCATCGTCCTGATGCAGGCGCGGTAAT                                                                                     <  SRR4302542.3595383/94‑1 (MQ=60)

          TGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATG                                                                                    >  SRR4302542.5289676/1‑94 (MQ=60)

          TGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATG                                                                                    <  SRR4302542.92046/94‑1 (MQ=60)

          TGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATG                                                                                    >  SRR4302542.1607751/1‑94 (MQ=60)

           GTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGC                                                                                   >  SRR4302542.4652624/1‑94 (MQ=60)

            TTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCC                                                                                  >  SRR4302542.7303363/1‑94 (MQ=60)

            TTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCC                                                                                  >  SRR4302542.5381412/1‑94 (MQ=60)

            TTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCC                                                                                  <  SRR4302542.5728171/94‑1 (MQ=60)

             TCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCA                                                                                 <  SRR4302542.836105/94‑1 (MQ=60)

             TCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCA                                                                                 >  SRR4302542.5550726/1‑94 (MQ=60)

              CTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAG                                                                                >  SRR4302542.2305314/1‑94 (MQ=60)

              CTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAG                                                                                >  SRR4302542.5248453/1‑94 (MQ=60)

              CTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAG                                                                                <  SRR4302542.4045297/94‑1 (MQ=60)

              CTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAG                                                                                >  SRR4302542.2434470/1‑94 (MQ=60)

               TTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGT                                                                               >  SRR4302542.3839379/1‑94 (MQ=60)

                 CATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTG                                                                             <  SRR4302542.5225931/94‑1 (MQ=60)

                 CATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTG                                                                             >  SRR4302542.139411/1‑94 (MQ=60)

                 CATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTG                                                                             <  SRR4302542.3665987/94‑1 (MQ=60)

                  ATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGG                                                                            >  SRR4302542.1655899/1‑94 (MQ=60)

                  ATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGG                                                                            >  SRR4302542.5349083/1‑94 (MQ=60)

                  ATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGG                                                                            >  SRR4302542.3045859/1‑94 (MQ=60)

                  ATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAACGCCAGTTGG                                                                            <  SRR4302542.2592625/94‑1 (MQ=60)

                   TAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGT                                                                           <  SRR4302542.373542/94‑1 (MQ=60)

                   TAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGT                                                                           >  SRR4302542.3612916/1‑94 (MQ=60)

                     ATGGCGCTGCAGCATTTGCTGGTGAAGGTTGAAACTGCGCACCAAAATACCGTTTTCACCGTCCGGAGGCAGGCGCGGTAATGCCAGTTGGTGA                                                                         <  SRR4302542.6214456/94‑1 (MQ=42)

                     ATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGA                                                                         >  SRR4302542.6169795/1‑94 (MQ=60)

                     ATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGA                                                                         >  SRR4302542.3408868/1‑94 (MQ=60)

                      TGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGAC                                                                        <  SRR4302542.4395977/94‑1 (MQ=60)

                      TGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGAC                                                                        >  SRR4302542.2184093/1‑94 (MQ=60)

                         CGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAA                                                                     >  SRR4302542.6102014/1‑94 (MQ=60)

                         CGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAA                                                                     <  SRR4302542.2716677/94‑1 (MQ=60)

                          GCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAAC                                                                    >  SRR4302542.5458919/1‑94 (MQ=60)

                          GCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAAC                                                                    >  SRR4302542.2879113/1‑94 (MQ=60)

                           CTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACA                                                                   <  SRR4302542.3275939/94‑1 (MQ=60)

                            TGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAA                                                                  <  SRR4302542.3779307/94‑1 (MQ=60)

                               AGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCT                                                               <  SRR4302542.2740095/94‑1 (MQ=60)

                               AGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCT                                                               >  SRR4302542.2773387/1‑94 (MQ=60)

                               AGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCT                                                               <  SRR4302542.7321823/94‑1 (MQ=60)

                               AGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCT                                                               >  SRR4302542.2155100/1‑94 (MQ=60)

                               AGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCT                                                               >  SRR4302542.2714471/1‑94 (MQ=60)

                                 CAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCC                                                             <  SRR4302542.1260451/94‑1 (MQ=60)

                                 CAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCC                                                             >  SRR4302542.760614/1‑94 (MQ=60)

                                 CAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCC                                                             >  SRR4302542.43825/1‑94 (MQ=60)

                                  AATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCT                                                            >  SRR4302542.5978332/1‑94 (MQ=60)

                                  AATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCT                                                            <  SRR4302542.6033962/94‑1 (MQ=60)

                                   ATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTT                                                           >  SRR4302542.3668392/1‑94 (MQ=60)

                                   ATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTT                                                           <  SRR4302542.2553676/94‑1 (MQ=60)

                                   ATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTT                                                           <  SRR4302542.3403699/94‑1 (MQ=60)

                                   ATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTT                                                           <  SRR4302542.6673458/94‑1 (MQ=60)

                                   ATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTT                                                           <  SRR4302542.2164522/94‑1 (MQ=60)

                                   ATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTT                                                           >  SRR4302542.4408496/1‑94 (MQ=60)

                                   ATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTT                                                           <  SRR4302542.6753881/94‑1 (MQ=60)

                                    TTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTG                                                          <  SRR4302542.4269370/94‑1 (MQ=60)

                                     TGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGG                                                         <  SRR4302542.5379432/94‑1 (MQ=60)

                                     TGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGG                                                         >  SRR4302542.182735/1‑94 (MQ=60)

                                      GCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGC                                                        <  SRR4302542.1964528/94‑1 (MQ=60)

                                       CTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCT                                                       <  SRR4302542.4021629/94‑1 (MQ=60)

                                       CTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCT                                                       <  SRR4302542.402852/94‑1 (MQ=60)

                                        TGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTG                                                      >  SRR4302542.7558230/1‑94 (MQ=60)

                                         GGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGG                                                     <  SRR4302542.4131188/94‑1 (MQ=60)

                                         GGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGG                                                     <  SRR4302542.2658476/94‑1 (MQ=60)

                                         GGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGG                                                     >  SRR4302542.1818108/1‑94 (MQ=60)

                                          GTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGG                                                    <  SRR4302542.4606367/94‑1 (MQ=60)

                                          GTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGG                                                    >  SRR4302542.3723169/1‑94 (MQ=60)

                                            TGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGAT                                                  >  SRR4302542.3156996/1‑94 (MQ=60)

                                            TGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGAT                                                  <  SRR4302542.3287170/94‑1 (MQ=60)

                                            TGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGAT                                                  <  SRR4302542.1367134/94‑1 (MQ=60)

                                            TGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGAT                                                  >  SRR4302542.3106836/1‑94 (MQ=60)

                                            TGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGAT                                                  >  SRR4302542.3106834/1‑94 (MQ=60)

                                             GAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATG                                                 >  SRR4302542.6957578/1‑94 (MQ=60)

                                             GAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATG                                                 <  SRR4302542.481333/94‑1 (MQ=60)

                                             GAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATG                                                 <  SRR4302542.1196845/94‑1 (MQ=60)

                                              AGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGG                                                >  SRR4302542.666284/1‑94 (MQ=60)

                                              AGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGG                                                <  SRR4302542.6647339/94‑1 (MQ=60)

                                              AGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGG                                                <  SRR4302542.175429/94‑1 (MQ=60)

                                              AGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGG                                                >  SRR4302542.4704869/1‑94 (MQ=60)

                                                GTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCG                                              >  SRR4302542.6764819/1‑94 (MQ=60)

                                                GTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCG                                              <  SRR4302542.5551311/94‑1 (MQ=60)

                                                GTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCG                                              <  SRR4302542.2331867/94‑1 (MQ=60)

                                                 TTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGT                                             <  SRR4302542.1334055/94‑1 (MQ=60)

                                                   GTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTA                                           >  SRR4302542.4620602/1‑94 (MQ=60)

                                                   GTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTA                                           >  SRR4302542.5844159/1‑94 (MQ=60)

                                                   GTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTA                                           >  SRR4302542.5536024/1‑94 (MQ=60)

                                                    TAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAA                                          >  SRR4302542.2885959/1‑94 (MQ=60)

                                                    TAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGCGACCAACAAGCTCCTTGGCTGGGATGGCGTTAA                                          <  SRR4302542.116101/94‑1 (MQ=60)

                                                     AACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAG                                         <  SRR4302542.5485626/94‑1 (MQ=60)

                                                     AACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAG                                         <  SRR4302542.7127832/94‑1 (MQ=60)

                                                      ACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGT                                        <  SRR4302542.1402313/94‑1 (MQ=60)

                                                      ACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGT                                        >  SRR4302542.4413426/1‑94 (MQ=60)

                                                      ACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGT                                        <  SRR4302542.4611570/94‑1 (MQ=60)

                                                       CCGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTT                                       <  SRR4302542.5922399/94‑1 (MQ=60)

                                                        TGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTC                                      <  SRR4302542.197481/94‑1 (MQ=60)

                                                        TGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTC                                      <  SRR4302542.6008295/94‑1 (MQ=60)

                                                        TGCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTC                                      <  SRR4302542.3560022/94‑1 (MQ=60)

                                                         GCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCG                                     <  SRR4302542.3873225/94‑1 (MQ=60)

                                                         GCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCG                                     <  SRR4302542.6966591/94‑1 (MQ=60)

                                                         GCGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCG                                     >  SRR4302542.4657688/1‑94 (MQ=60)

                                                          CGCACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGC                                    >  SRR4302542.5725832/1‑94 (MQ=60)

                                                             ACCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAG                                 >  SRR4302542.4466423/1‑94 (MQ=60)

                                                              CCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGC                                <  SRR4302542.3908900/94‑1 (MQ=60)

                                                              CCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGC                                <  SRR4302542.3091414/94‑1 (MQ=60)

                                                              CCAACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGC                                >  SRR4302542.1816552/1‑94 (MQ=60)

                                                              CCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGC                                >  SRR4302542.3615382/1‑94 (MQ=60)

                                                                AACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAA                              >  SRR4302542.2271125/1‑94 (MQ=60)

                                                                AACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAA                              >  SRR4302542.3387110/1‑94 (MQ=60)

                                                                AACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAA                              >  SRR4302542.5696710/1‑94 (MQ=60)

                                                                 ACATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCACGAGCAAT                             >  SRR4302542.6373986/1‑94 (MQ=60)

                                                                  CATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATA                            <  SRR4302542.855112/94‑1 (MQ=60)

                                                                  CATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATA                            <  SRR4302542.2840546/94‑1 (MQ=60)

                                                                  CATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATA                            <  SRR4302542.6124321/94‑1 (MQ=60)

                                                                   ATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATAT                           <  SRR4302542.6908566/94‑1 (MQ=60)

                                                                   ATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATAT                           <  SRR4302542.5872409/94‑1 (MQ=60)

                                                                   ATACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATAT                           >  SRR4302542.6190217/1‑94 (MQ=60)

                                                                   ATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATAT                           >  SRR4302542.6486907/1‑94 (MQ=60)

                                                                    TACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATT                          <  SRR4302542.874812/94‑1 (MQ=60)

                                                                    TACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATT                          >  SRR4302542.5260111/1‑94 (MQ=60)

                                                                     ACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTG                         <  SRR4302542.3555652/94‑1 (MQ=60)

                                                                     ACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTG                         <  SRR4302542.1868173/94‑1 (MQ=60)

                                                                     ACCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGCGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTG                         >  SRR4302542.6618812/1‑94 (MQ=60)

                                                                      CCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGC                        >  SRR4302542.882402/1‑94 (MQ=60)

                                                                      CCGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGC                        <  SRR4302542.6929596/94‑1 (MQ=60)

                                                                       CGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCG                       >  SRR4302542.2913166/1‑94 (MQ=60)

                                                                       CGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCG                       <  SRR4302542.5178328/94‑1 (MQ=60)

                                                                       CGATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCG                       >  SRR4302542.5147731/1‑94 (MQ=60)

                                                                        GATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGT                      >  SRR4302542.739618/1‑94 (MQ=60)

                                                                         ATTTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTA                     >  SRR4302542.2666679/1‑94 (MQ=60)

                                                                         ATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTA                     <  SRR4302542.7107410/94‑1 (MQ=60)

                                                                           TTCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAAC                   <  SRR4302542.3219823/94‑1 (MQ=60)

                                                                            TCATCGTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACG                  <  SRR4302542.3395210/94‑1 (MQ=60)

                                                                             CATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGG                 >  SRR4302542.6624096/1‑94 (MQ=60)

                                                                               TCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGAT               <  SRR4302542.7492362/94‑1 (MQ=60)

                                                                                 GTCCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGC             >  SRR4302542.3778801/1‑94 (MQ=60)

                                                                                   CCTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAA           <  SRR4302542.4358120/94‑1 (MQ=60)

                                                                                    CTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAA          >  SRR4302542.3210865/1‑94 (MQ=60)

                                                                                    CTGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAA          >  SRR4302542.2221676/1‑94 (MQ=60)

                                                                                    CTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAA          >  SRR4302542.4098085/1‑94 (MQ=60)

                                                                                     TGATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAANN         >  SRR4302542.1823899/1‑94 (MQ=60)

                                                                                      GATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAAT        <  SRR4302542.3527839/94‑1 (MQ=60)

                                                                                      GATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAAT        <  SRR4302542.3527838/94‑1 (MQ=60)

                                                                                      GATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAAT        <  SRR4302542.3208985/94‑1 (MQ=60)

                                                                                       ATGCAGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATC       <  SRR4302542.2887697/94‑1 (MQ=60)

                                                                                           AGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGC   <  SRR4302542.2902765/94‑1 (MQ=60)

                                                                                           AGGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGC   >  SRR4302542.5331990/1‑94 (MQ=60)

                                                                                           AGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGC   >  SRR4302542.7327239/1‑94 (MQ=60)

                                                                                           AGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGC   >  SRR4302542.3508832/1‑94 (MQ=60)

                                                                                           AGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGC   >  SRR4302542.3362115/1‑94 (MQ=60)

                                                                                            GGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGCG  <  SRR4302542.2251569/94‑1 (MQ=60)

                                                                                            GGCGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGCG  <  SRR4302542.5715282/94‑1 (MQ=60)

ATTTTCGTTCTGTTCTTCATAATGGCGCTGCAGCAATTGCTGGTTGAGGTTGTAACTGCGCACCAACATACCGATTTCATCGTCCTGATGCAGACGCGGTAATGCCAGTTGGTGACCAACAAGCTCCTTGGCTGGGATGGCGTTAAGTTCGCGAGCAATATTGCGTAACGGATGCAAAATCAGGCG  >  NC_000913/3682526‑3682711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`