Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,710,261	T→C	E101E (GAA→GAG)	b3548 ←	putative lipase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,710,261	0	T	C	85.2%	754.8 / 120.9	324	E101E (GAA→GAG)	b3548	putative lipase
Reads supporting (aligned to +/- strand): ref base T (25/23); new base C (157/119); total (182/142)
Fisher's exact test for biased strand distribution p-value = 5.34e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.97e-02

Only 100 of 326 total aligned reads displayed.

GTCAGCGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCCCT  >  NC_000913/3710169‑3710353

  cAGCGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTc                                                                                            <  1:6416369/93‑1 (MQ=255)

   aGCGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGGCGGTTGTAACCTGCTCa                                                                                           <  2:6861460/93‑1 (MQ=255)

   aGCGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGTTCa                                                                                           <  2:1844574/93‑1 (MQ=255)

   aGCGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCa                                                                                           <  2:2474609/93‑1 (MQ=255)

     cGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCata                                                                                         >  2:2785954/1‑93 (MQ=255)

      gTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCatat                                                                                        >  2:4249049/1‑93 (MQ=255)

      gTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCatat                                                                                        >  1:5719357/1‑93 (MQ=255)

      gTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCatat                                                                                        <  2:6489996/93‑1 (MQ=255)

       tGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCAtata                                                                                       >  1:7126096/1‑93 (MQ=255)

        ggTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATaa                                                                                      <  1:4583626/93‑1 (MQ=255)

         gtagtaCTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATaaa                                                                                     >  1:819735/1‑93 (MQ=255)

         gtagtaCTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATaaa                                                                                     >  1:3469964/1‑93 (MQ=255)

          tagtaCTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAg                                                                                    <  1:48727/93‑1 (MQ=255)

           agtaCTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAgg                                                                                   <  1:4968697/93‑1 (MQ=255)

            gtaCTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGa                                                                                  >  1:2517061/1‑93 (MQ=255)

             taCTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGaa                                                                                 >  2:1539677/1‑93 (MQ=255)

             taCTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGaa                                                                                 <  1:4174859/93‑1 (MQ=255)

              aCTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGaaa                                                                                <  2:3745405/93‑1 (MQ=255)

              aCTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGaaa                                                                                <  2:2303929/93‑1 (MQ=255)

               cTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGaaaa                                                                               <  1:1034583/93‑1 (MQ=255)

                tGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGTTCATATAAAGGAAAAt                                                                              <  2:3842823/93‑1 (MQ=255)

                tGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAAt                                                                              >  1:3340110/1‑93 (MQ=255)

                  tCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTc                                                                            <  1:1858211/93‑1 (MQ=255)

                   cGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTcc                                                                           <  2:3066363/93‑1 (MQ=255)

                    gCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCa                                                                          <  2:4994274/93‑1 (MQ=255)

                    gCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCa                                                                          >  1:5037150/1‑93 (MQ=255)

                     ccAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAg                                                                         >  2:4324923/1‑93 (MQ=255)

                     ccAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAg                                                                         >  1:4504725/1‑93 (MQ=255)

                     ccAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAg                                                                         >  2:4595953/1‑93 (MQ=255)

                     ccAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAg                                                                         <  1:6029135/93‑1 (MQ=255)

                      cAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGc                                                                        >  1:203965/1‑93 (MQ=255)

                       aaaCTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGTTCATATAAAGGAAAACTCCAGcc                                                                       >  2:448542/1‑93 (MQ=255)

                        aaCTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGccc                                                                      >  1:39484/1‑93 (MQ=255)

                        aaCTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGccc                                                                      >  2:1197142/1‑93 (MQ=255)

                        aaCTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGccc                                                                      >  1:1384226/1‑93 (MQ=255)

                         aCTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCca                                                                     >  2:1128996/1‑93 (MQ=255)

                          cTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCcat                                                                    >  1:296967/1‑93 (MQ=255)

                           tCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCcata                                                                   <  1:682494/93‑1 (MQ=255)

                             gTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCcatact                                                                 >  1:920383/1‑93 (MQ=255)

                              ttATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCcatactc                                                                >  1:5297170/1‑93 (MQ=255)

                              ttATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCcatactc                                                                >  2:1658533/1‑93 (MQ=255)

                                ataCATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCcatactcat                                                              >  2:2062543/1‑93 (MQ=255)

                                ataCATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCcatactcat                                                              >  2:2697798/1‑93 (MQ=255)

                                 taCATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCcatactcata                                                             >  2:3705657/1‑93 (MQ=255)

                                   cATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGCCCGGGCCGGTTGTACCCTGCTCATATAAAGGAAAATTCCAGCCcatactcatact                                                           >  1:6923480/1‑93 (MQ=255)

                                   cATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCcatactcatact                                                           >  1:2878305/1‑93 (MQ=255)

                                   cATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCcatactcatact                                                           >  2:568769/1‑93 (MQ=255)

                                    aTCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATActg                                                          >  1:3112965/1‑93 (MQ=255)

                                      cGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATActgct                                                        <  2:4110624/93‑1 (MQ=255)

                                         ggtggtTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGt                                                     <  2:3200104/93‑1 (MQ=255)

                                          gtggtTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTc                                                    >  1:5877054/1‑93 (MQ=255)

                                           tggtTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTca                                                   >  1:2093610/1‑93 (MQ=255)

                                            ggtTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTcac                                                  <  1:3688904/93‑1 (MQ=255)

                                             gtTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTcaca                                                 >  2:2605479/1‑93 (MQ=255)

                                              ttGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACAt                                                >  1:5225372/1‑93 (MQ=255)

                                               tgtgCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATc                                               <  1:6319887/93‑1 (MQ=255)

                                                 tgCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCca                                             <  2:5944125/93‑1 (MQ=255)

                                                   ccATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCcaca                                           <  1:7052294/93‑1 (MQ=255)

                                                   ccATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCcaca                                           >  1:6137077/1‑93 (MQ=255)

                                                   ccATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCcaca                                           >  2:614294/1‑93 (MQ=255)

                                                   ccATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCcaca                                           <  1:1461768/93‑1 (MQ=255)

                                                    cATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAg                                          >  1:273145/1‑93 (MQ=255)

                                                      tCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAggg                                        <  1:2931968/93‑1 (MQ=255)

                                                      tCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAggg                                        <  2:1061711/93‑1 (MQ=255)

                                                      tCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAggg                                        >  2:76217/1‑93 (MQ=255)

                                                        gtaatgtaatGCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGt                                      >  2:6878044/1‑93 (MQ=255)

                                                           atgtaatgCCGCGACCGGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTttc                                   >  2:774126/1‑93 (MQ=255)

                                                            tgtaatgCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTttct                                  >  2:5202400/1‑93 (MQ=255)

                                                            tgtaatgCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTttct                                  <  2:671600/93‑1 (MQ=255)

                                                              taatgCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTttcttc                                >  1:3971131/1‑93 (MQ=255)

                                                              taatgCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTttcttc                                <  2:7413581/93‑1 (MQ=255)

                                                              taatgCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTttcttc                                <  2:3640423/93‑1 (MQ=255)

                                                               aatgCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTcc                               <  2:62950/93‑1 (MQ=255)

                                                                  gCCGCGACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGcc                            >  2:2158907/1‑93 (MQ=255)

                                                                     gcgACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGa                         >  1:7439090/1‑93 (MQ=255)

                                                                      cgACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGAt                        <  2:2936524/93‑1 (MQ=255)

                                                                       gACCGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGAtt                       >  2:3405970/1‑93 (MQ=255)

                                                                        aCCGGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTg                      >  1:3535756/1‑93 (MQ=255)

                                                                         ccGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACAGCCACAGGGGTTTCTTCCGCCAGATTGa                     <  2:6416985/93‑1 (MQ=255)

                                                                          cGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGAc                    >  2:7049358/1‑93 (MQ=255)

                                                                           gggCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACt                   >  1:3215483/1‑93 (MQ=255)

                                                                              ccGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTcc                >  1:567301/1‑93 (MQ=255)

                                                                              ccGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTcc                <  2:4867109/93‑1 (MQ=255)

                                                                               cGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCa               <  1:4095310/93‑1 (MQ=255)

                                                                               cGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCa               <  1:3034620/93‑1 (MQ=255)

                                                                                 gTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTACCGCCAGATTGACTTCCAGt             >  1:5522887/1‑93 (MQ=255)

                                                                                 gTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGt             >  2:4929407/1‑93 (MQ=255)

                                                                                 gTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGt             >  2:3999209/1‑93 (MQ=255)

                                                                                  ttGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTc            >  2:5389738/1‑93 (MQ=255)

                                                                                  ttGTAACCTGCCCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTc            >  2:4655318/1‑93 (MQ=255)

                                                                                    gTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTccc          >  1:113921/1‑93 (MQ=255)

                                                                                    gTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTccc          >  2:509816/1‑93 (MQ=255)

                                                                                    gTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTccc          >  1:6180266/1‑93 (MQ=255)

                                                                                    gTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTccc          >  1:4790964/1‑93 (MQ=255)

                                                                                    gTAACCTGCTCATATAAAAGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTccc          >  1:4294450/1‑93 (MQ=255)

                                                                                     tAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCa         <  2:5770238/93‑1 (MQ=255)

                                                                                      aaCCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAg        <  2:5860184/93‑1 (MQ=255)

                                                                                          tGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGcc    >  1:6638293/1‑93 (MQ=255)

                                                                                           gTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGTCAGATTGACTTCCAGTCCCAGCGccc   >  1:1714654/1‑93 (MQ=255)

                                                                                            ttCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCCCt  <  1:97539/93‑1 (MQ=255)

GTCAGCGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACCGGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCCCT  >  NC_000913/3710169‑3710353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GGTCAGCGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCCCTT  >  NC_000913/3710168‑3710354

GGTCAGCGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGT                                                                                               >  SRR4302542.2452313/1‑94 (MQ=60)

GGTCAGCGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGC                                                                                               >  SRR4302542.3977120/1‑94 (MQ=60)

 GTCAGCGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCT                                                                                              <  SRR4302542.1281464/94‑1 (MQ=60)

   CAGCGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCA                                                                                            <  SRR4302542.6479601/94‑1 (MQ=60)

    AGCGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCAT                                                                                           <  SRR4302542.1611646/94‑1 (MQ=60)

      CGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATAT                                                                                         >  SRR4302542.6320804/1‑94 (MQ=60)

      CGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATAT                                                                                         <  SRR4302542.1047131/94‑1 (MQ=60)

      CGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATAT                                                                                         >  SRR4302542.5338382/1‑94 (MQ=60)

      CGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATAT                                                                                         >  SRR4302542.5774872/1‑94 (MQ=60)

      CGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATAT                                                                                         <  SRR4302542.2858370/94‑1 (MQ=60)

       GTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATA                                                                                        <  SRR4302542.3777389/94‑1 (MQ=60)

       GTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATA                                                                                        >  SRR4302542.4006276/1‑94 (MQ=60)

       GTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATA                                                                                        >  SRR4302542.4018770/1‑94 (MQ=60)

       GTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATA                                                                                        >  SRR4302542.7196034/1‑94 (MQ=60)

       GTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATA                                                                                        <  SRR4302542.180791/94‑1 (MQ=60)

       GTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATA                                                                                        <  SRR4302542.7475153/94‑1 (MQ=60)

       GTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATA                                                                                        >  SRR4302542.1662601/1‑94 (MQ=60)

         GGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAA                                                                                      <  SRR4302542.4628468/94‑1 (MQ=60)

         GGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAA                                                                                      >  SRR4302542.826817/1‑94 (MQ=60)

         GGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAA                                                                                      >  SRR4302542.3502456/1‑94 (MQ=60)

         GGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAA                                                                                      >  SRR4302542.3539675/1‑94 (MQ=60)

          GTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAG                                                                                     <  SRR4302542.4808534/94‑1 (MQ=60)

           TAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGG                                                                                    <  SRR4302542.49129/94‑1 (MQ=60)

           TAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGG                                                                                    >  SRR4302542.1431557/1‑94 (MQ=60)

            AGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGA                                                                                   >  SRR4302542.4263357/1‑94 (MQ=60)

            AGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGA                                                                                   >  SRR4302542.2091091/1‑94 (MQ=60)

            AGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGA                                                                                   >  SRR4302542.4003093/1‑94 (MQ=60)

            AGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGA                                                                                   >  SRR4302542.2362348/1‑94 (MQ=60)

            AGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGA                                                                                   <  SRR4302542.5016942/94‑1 (MQ=60)

            AGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGA                                                                                   >  SRR4302542.2541479/1‑94 (MQ=60)

            AGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGA                                                                                   >  SRR4302542.7319223/1‑94 (MQ=60)

            AGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTACCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGA                                                                                   >  SRR4302542.6878909/1‑94 (MQ=60)

             GTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAA                                                                                  >  SRR4302542.6984455/1‑94 (MQ=60)

             GTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAA                                                                                  <  SRR4302542.6557858/94‑1 (MQ=60)

              TACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAA                                                                                 >  SRR4302542.5708694/1‑94 (MQ=60)

              TACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAA                                                                                 <  SRR4302542.4216033/94‑1 (MQ=60)

               ACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAA                                                                                >  SRR4302542.5258826/1‑94 (MQ=60)

                CTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAAT                                                                               <  SRR4302542.3526202/94‑1 (MQ=60)

                CTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAAT                                                                               >  SRR4302542.3371548/1‑94 (MQ=60)

                CTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAAT                                                                               <  SRR4302542.1043473/94‑1 (MQ=60)

                  GTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTC                                                                             <  SRR4302542.1403910/94‑1 (MQ=60)

                   TCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCC                                                                            <  SRR4302542.1874264/94‑1 (MQ=60)

                   TCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCC                                                                            <  SRR4302542.824224/94‑1 (MQ=60)

                    CGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCA                                                                           <  SRR4302542.2962909/94‑1 (MQ=60)

                    CGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCA                                                                           >  SRR4302542.6015226/1‑94 (MQ=60)

                    CGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCA                                                                           >  SRR4302542.5086051/1‑94 (MQ=60)

                    CGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCA                                                                           >  SRR4302542.5307111/1‑94 (MQ=60)

                    CGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCA                                                                           >  SRR4302542.6726154/1‑94 (MQ=60)

                     GCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAG                                                                          >  SRR4302542.4548888/1‑94 (MQ=60)

                     GCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAG                                                                          <  SRR4302542.7391916/94‑1 (MQ=60)

                     GCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAG                                                                          >  SRR4302542.6166591/1‑94 (MQ=60)

                      CCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGC                                                                         >  SRR4302542.205691/1‑94 (MQ=60)

                      CCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGC                                                                         >  SRR4302542.332760/1‑94 (MQ=60)

                      CCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGC                                                                         <  SRR4302542.6087511/94‑1 (MQ=60)

                        AAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCC                                                                       >  SRR4302542.39836/1‑94 (MQ=60)

                        AAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCC                                                                       >  SRR4302542.1396185/1‑94 (MQ=60)

                          ACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCAT                                                                     >  SRR4302542.299560/1‑94 (MQ=60)

                          ACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCAT                                                                     <  SRR4302542.2942691/94‑1 (MQ=60)

                          ACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCAT                                                                     <  SRR4302542.961578/94‑1 (MQ=60)

                            TCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATAC                                                                   <  SRR4302542.788560/94‑1 (MQ=60)

                            TCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATAC                                                                   <  SRR4302542.688386/94‑1 (MQ=60)

                             CGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACT                                                                  <  SRR4302542.31986/94‑1 (MQ=60)

                             CGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACT                                                                  >  SRR4302542.928309/1‑94 (MQ=60)

                             CGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACT                                                                  >  SRR4302542.3636176/1‑94 (MQ=60)

                              GTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTC                                                                 >  SRR4302542.992112/1‑94 (MQ=60)

                              GTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTC                                                                 >  SRR4302542.5348645/1‑94 (MQ=60)

                              GTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTC                                                                 <  SRR4302542.4577961/94‑1 (MQ=60)

                              GTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTC                                                                 >  SRR4302542.4583806/1‑94 (MQ=60)

                              GTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTC                                                                 >  SRR4302542.3387446/1‑94 (MQ=60)

                                TATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCAT                                                               <  SRR4302542.4324991/94‑1 (MQ=60)

                                  TACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATAC                                                             >  SRR4302542.2974142/1‑94 (MQ=60)

                                   ACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGCCC‑GGGCCGGTTGTACCCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACT                                                            >  SRR4302542.6991454/1‑94 (MQ=60)

                                   ACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACT                                                            >  SRR4302542.2905959/1‑94 (MQ=60)

                                   ACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACT                                                            <  SRR4302542.4477019/94‑1 (MQ=60)

                                   ACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACT                                                            <  SRR4302542.6206032/94‑1 (MQ=60)

                                   ACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACT                                                            >  SRR4302542.6019942/1‑94 (MQ=60)

                                   ACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACT                                                            <  SRR4302542.2029789/94‑1 (MQ=60)

                                    CATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTG                                                           >  SRR4302542.3918917/1‑94 (MQ=60)

                                    CATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTG                                                           >  SRR4302542.6193505/1‑94 (MQ=60)

                                    CATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTG                                                           <  SRR4302542.4914925/94‑1 (MQ=60)

                                    CATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTG                                                           >  SRR4302542.3142542/1‑94 (MQ=60)

                                     ATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGC                                                          <  SRR4302542.6444163/94‑1 (MQ=60)

                                     ATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGC                                                          >  SRR4302542.853833/1‑94 (MQ=60)

                                     ATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGC                                                          <  SRR4302542.7137948/94‑1 (MQ=60)

                                      TCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCT                                                         <  SRR4302542.209476/94‑1 (MQ=60)

                                       CGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTG                                                        >  SRR4302542.1166122/1‑94 (MQ=60)

                                        GAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGG                                                       >  SRR4302542.3817161/1‑94 (MQ=60)

                                         AGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGT                                                      <  SRR4302542.6217450/94‑1 (MQ=60)

                                         AGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGT                                                      >  SRR4302542.5737564/1‑94 (MQ=60)

                                         AGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGT                                                      <  SRR4302542.5481004/94‑1 (MQ=60)

                                          GGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTC                                                     >  SRR4302542.6370911/1‑94 (MQ=60)

                                          GGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTC                                                     >  SRR4302542.5934029/1‑94 (MQ=60)

                                           GTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCA                                                    >  SRR4302542.3425658/1‑94 (MQ=60)

                                           GTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCA                                                    >  SRR4302542.2111671/1‑94 (MQ=60)

                                             GGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACA                                                  <  SRR4302542.3725385/94‑1 (MQ=60)

                                              GTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACAT                                                 >  SRR4302542.5276191/1‑94 (MQ=60)

                                               TTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATC                                                >  SRR4302542.5041646/1‑94 (MQ=60)

                                                TGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCC                                               <  SRR4302542.6382175/94‑1 (MQ=60)

                                                 GTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCA                                              <  SRR4302542.5888410/94‑1 (MQ=60)

                                                 GTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCA                                              <  SRR4302542.3683831/94‑1 (MQ=60)

                                                  TGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCAC                                             <  SRR4302542.6555124/94‑1 (MQ=60)

                                                   GCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACA                                            >  SRR4302542.6196455/1‑94 (MQ=60)

                                                    CCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAG                                           <  SRR4302542.7121525/94‑1 (MQ=60)

                                                    CCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAG                                           <  SRR4302542.1474391/94‑1 (MQ=60)

                                                    CCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAG                                           >  SRR4302542.7075045/1‑94 (MQ=60)

                                                    CCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAG                                           >  SRR4302542.275487/1‑94 (MQ=60)

                                                     CATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGG                                          >  SRR4302542.4796999/1‑94 (MQ=60)

                                                     CATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGG                                          <  SRR4302542.3027216/94‑1 (MQ=60)

                                                      ATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGG                                         <  SRR4302542.4219967/94‑1 (MQ=60)

                                                      ATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGG                                         >  SRR4302542.2012406/1‑94 (MQ=60)

                                                      ATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGG                                         >  SRR4302542.3319078/1‑94 (MQ=60)

                                                      ATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGG                                         >  SRR4302542.4206733/1‑94 (MQ=60)

                                                      ATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGG                                         >  SRR4302542.6417329/1‑94 (MQ=60)

                                                       TCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGG                                        <  SRR4302542.2960054/94‑1 (MQ=60)

                                                       TCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGG                                        <  SRR4302542.3080578/94‑1 (MQ=60)

                                                       TCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGG                                        <  SRR4302542.3080579/94‑1 (MQ=60)

                                                        CGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGT                                       >  SRR4302542.4998122/1‑94 (MQ=60)

                                                           AATGTAATGCCGCGACCGGGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTA                                     <  SRR4302542.4955320/94‑1 (MQ=60)

                                                           AATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTC                                    <  SRR4302542.972402/94‑1 (MQ=60)

                                                            ATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCT                                   >  SRR4302542.4851010/1‑94 (MQ=60)

                                                             TGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTT                                  >  SRR4302542.7176722/1‑94 (MQ=60)

                                                             TGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTT                                  <  SRR4302542.3357470/94‑1 (MQ=60)

                                                             TGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTT                                  >  SRR4302542.1823902/1‑94 (MQ=60)

                                                              GTAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTC                                 >  SRR4302542.4010320/1‑94 (MQ=60)

                                                               TAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCC                                <  SRR4302542.2427628/94‑1 (MQ=60)

                                                               TAATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCC                                >  SRR4302542.1287641/1‑94 (MQ=60)

                                                                 ATGCCGCGACC‑GGGCCGGTTGTAACCTGCTCATAT‑AAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCC                             >  SRR4302542.2943309/1‑94 (MQ=60)

                                                                    CCGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAG                           >  SRR4302542.91028/1‑94 (MQ=60)

                                                                     CGCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGA                          >  SRR4302542.7511893/1‑94 (MQ=60)

                                                                      GCGACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGAT                         <  SRR4302542.5262103/94‑1 (MQ=60)

                                                                       CGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATT                        >  SRR4302542.5430438/1‑94 (MQ=60)

                                                                        GACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTG                       >  SRR4302542.3568802/1‑94 (MQ=60)

                                                                        GACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTG                       <  SRR4302542.1090511/94‑1 (MQ=60)

                                                                         ACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGA                      <  SRR4302542.5752641/94‑1 (MQ=60)

                                                                         ACC‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGA                      >  SRR4302542.3228767/1‑94 (MQ=60)

                                                                           C‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACT                    >  SRR4302542.3245914/1‑94 (MQ=60)

                                                                           C‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACT                    >  SRR4302542.2788226/1‑94 (MQ=60)

                                                                           C‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACT                    >  SRR4302542.953828/1‑94 (MQ=60)

                                                                           C‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACT                    <  SRR4302542.4809506/94‑1 (MQ=60)

                                                                           C‑GGGCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCAAGATTGACT                    >  SRR4302542.2683648/1‑94 (MQ=60)

                                                                               GCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCC                 >  SRR4302542.572181/1‑94 (MQ=60)

                                                                               GCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCC                 <  SRR4302542.5843859/94‑1 (MQ=60)

                                                                               GCCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCC                 <  SRR4302542.4157069/94‑1 (MQ=60)

                                                                                CCGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCA                >  SRR4302542.5046384/1‑94 (MQ=60)

                                                                                 CGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCATAGGGGTTTCTTCCGCCAGATTGACTTCCAG               <  SRR4302542.574299/94‑1 (MQ=60)

                                                                                 CGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAG               <  SRR4302542.4135706/94‑1 (MQ=60)

                                                                                 CGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAG               <  SRR4302542.3063571/94‑1 (MQ=60)

                                                                                 CGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAG               >  SRR4302542.6838049/1‑94 (MQ=60)

                                                                                 CGGTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAG               <  SRR4302542.6897578/94‑1 (MQ=60)

                                                                                  GGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGT              >  SRR4302542.5713563/1‑94 (MQ=60)

                                                                                  GGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTACCGCCAGATTGACTTCCAGT              >  SRR4302542.5576565/1‑94 (MQ=60)

                                                                                   GTTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTC             >  SRR4302542.4357061/1‑94 (MQ=60)

                                                                                    TTGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCC            >  SRR4302542.6229335/1‑94 (MQ=60)

                                                                                     TGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCC           >  SRR4302542.4837649/1‑94 (MQ=60)

                                                                                     TGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCC           >  SRR4302542.114856/1‑94 (MQ=60)

                                                                                     TGTAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCC           >  SRR4302542.6240209/1‑94 (MQ=60)

                                                                                     TGTAACCTGCTCATATAAAAGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCC           >  SRR4302542.4336691/1‑94 (MQ=60)

                                                                                       TAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAG         >  SRR4302542.7012636/1‑94 (MQ=60)

                                                                                       TAACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAG         <  SRR4302542.261466/94‑1 (MQ=60)

                                                                                        AACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGC        >  SRR4302542.1562613/1‑94 (MQ=60)

                                                                                        AACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGC        <  SRR4302542.4118268/94‑1 (MQ=60)

                                                                                        AACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGC        >  SRR4302542.5180039/1‑94 (MQ=60)

                                                                                        AACCTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGC        <  SRR4302542.2964748/94‑1 (MQ=60)

                                                                                           CTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCC     >  SRR4302542.30505/1‑94 (MQ=60)

                                                                                           CTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCC     >  SRR4302542.6703723/1‑94 (MQ=60)

                                                                                           CTGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCC     >  SRR4302542.2621019/1‑94 (MQ=60)

                                                                                            TGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGTCAGATTGACTTCCAGTCCCAGCGCCC    >  SRR4302542.1729546/1‑94 (MQ=60)

                                                                                            TGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCCC    >  SRR4302542.426591/1‑94 (MQ=60)

                                                                                            TGCTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCCC    >  SRR4302542.6071424/1‑94 (MQ=60)

                                                                                             GCTCATATAAAGGAAAATTCCGGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCCCT   <  SRR4302542.3494923/94‑1 (MQ=60)

                                                                                              TTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCCCTT  <  SRR4302542.98359/94‑1 (MQ=60)

                                                                                              CTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCCCTT  <  SRR4302542.2924710/94‑1 (MQ=60)

                                                                                              CTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCCCTT  >  SRR4302542.3504289/1‑94 (MQ=60)

GGTCAGCGTGGTAGTACTGTCGCCAAACTCGTTATACATCGAGGTGGTTGTGCCATCGTAATGTAATGCCGCGACC‑GGGCCGGTTGTAACCTGTTCATATAAAGGAAAATTCCAGCCCATACTCATACTGCTGGTCACATCCACAGGGGTTTCTTCCGCCAGATTGACTTCCAGTCCCAGCGCCCTT  >  NC_000913/3710168‑3710354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`