Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,726,481	T→C	T174A (ACC→GCC)	xylB ←	xylulokinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,726,481	0	T	C	85.8%	826.2 / 118.4	352	T174A (ACC→GCC)	xylB	xylulokinase
Reads supporting (aligned to +/- strand): ref base T (22/28); new base C (146/156); total (168/184)
Fisher's exact test for biased strand distribution p-value = 6.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.85e-01

Only 100 of 352 total aligned reads displayed.

CGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGAC  >  NC_000913/3726391‑3726570

 gTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGcc                                                                                        >  2:5492664/1‑93 (MQ=255)

  tataATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCa                                                                                       >  1:5797485/1‑93 (MQ=255)

   ataATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAg                                                                                      >  1:4823350/1‑93 (MQ=255)

   ataATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAg                                                                                      <  2:5330312/93‑1 (MQ=255)

     aaTGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCt                                                                                    <  1:90584/93‑1 (MQ=255)

      aTGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTg                                                                                   >  2:6349576/1‑93 (MQ=255)

       tGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGc                                                                                  >  2:1369120/1‑93 (MQ=255)

       tGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGc                                                                                  >  1:5382500/1‑93 (MQ=255)

       tGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGc                                                                                  <  1:4307653/93‑1 (MQ=255)

         cGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGt                                                                                >  2:6120870/1‑93 (MQ=255)

          gggCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTc                                                                               >  2:1602666/1‑93 (MQ=255)

          gggCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTc                                                                               >  1:2015613/1‑93 (MQ=255)

           ggCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCa                                                                              >  2:3775749/1‑93 (MQ=255)

             cATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGa                                                                            <  2:2387938/93‑1 (MQ=255)

               tCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACa                                                                          >  2:3201951/1‑93 (MQ=255)

               tCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACa                                                                          >  1:2397714/1‑93 (MQ=255)

                 tGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACata                                                                        >  2:4125586/1‑93 (MQ=255)

                 tGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACata                                                                        <  2:255360/93‑1 (MQ=255)

                 tGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACata                                                                        <  2:4583430/93‑1 (MQ=255)

                   gTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATc                                                                      <  2:6614733/93‑1 (MQ=255)

                     cACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGc                                                                    <  2:3660970/93‑1 (MQ=255)

                     cACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGc                                                                    <  2:7178987/93‑1 (MQ=255)

                      aCGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCt                                                                   >  1:3373585/1‑93 (MQ=255)

                      aCGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCt                                                                   >  1:2277325/1‑93 (MQ=255)

                       cGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTg                                                                  <  1:4458969/93‑1 (MQ=255)

                       cGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTg                                                                  >  1:1321244/1‑93 (MQ=255)

                        gagaTAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTgg                                                                 <  1:4347744/93‑1 (MQ=255)

                          gaaaaGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCa                                                               <  1:2708164/90‑1 (MQ=255)

                          gaTAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCa                                                               >  2:4275017/1‑93 (MQ=255)

                          gaTAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCa                                                               <  2:4009651/93‑1 (MQ=255)

                            tAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCaaa                                                             <  2:6546728/93‑1 (MQ=255)

                            tAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCaaa                                                             >  1:5642649/1‑93 (MQ=255)

                            tAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCAAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCaaa                                                             <  1:1712134/93‑1 (MQ=255)

                             aaGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAAc                                                            <  2:132040/93‑1 (MQ=255)

                             aaGCCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAAc                                                            <  2:4915637/93‑1 (MQ=255)

                               gTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTc                                                          <  1:6418359/93‑1 (MQ=255)

                                tCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTcc                                                         <  2:1931600/93‑1 (MQ=255)

                                tCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTcc                                                         >  1:1042812/1‑93 (MQ=255)

                                  gCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTcccc                                                       <  1:4170098/93‑1 (MQ=255)

                                  gCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTcccc                                                       <  1:3620467/93‑1 (MQ=255)

                                  gCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTcccc                                                       <  1:3510211/93‑1 (MQ=255)

                                    aaGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCg                                                     >  2:5707210/1‑93 (MQ=255)

                                     aGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGt                                                    >  2:3613195/1‑93 (MQ=255)

                                       ccTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCa                                                  >  1:668462/1‑93 (MQ=255)

                                       ccTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCa                                                  <  1:1369627/93‑1 (MQ=255)

                                         tGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATa                                                >  1:5564403/1‑93 (MQ=255)

                                            agcaTGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGc                                             >  1:1523555/1‑93 (MQ=255)

                                             gcaTGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCa                                            <  1:6927374/93‑1 (MQ=255)

                                             gcaTGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCa                                            <  2:813009/93‑1 (MQ=255)

                                             gcaTGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCa                                            <  1:7104208/93‑1 (MQ=255)

                                              gaTGGCGTCCCTCCAGTCCCGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAg                                           <  2:4151986/92‑1 (MQ=255)

                                               aTGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGa                                          <  2:5075536/93‑1 (MQ=255)

                                                tGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAgnn                                         >  2:2695047/1‑91 (MQ=255)

                                                tGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGAc                                         >  2:4451371/1‑93 (MQ=255)

                                                 gACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACg                                        >  2:3336247/1‑93 (MQ=255)

                                                    gTCCCTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCaa                                     <  1:28865/93‑1 (MQ=255)

                                                    gTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCaa                                     <  2:47276/93‑1 (MQ=255)

                                                    gTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCaa                                     <  1:4669881/93‑1 (MQ=255)

                                                    gTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCaa                                     <  1:1599985/93‑1 (MQ=255)

                                                       aCTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATCCGCAGACGCAAGTa                                  <  2:5185529/93‑1 (MQ=255)

                                                       aCTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTa                                  >  2:2974374/1‑93 (MQ=255)

                                                       aCTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTa                                  >  2:3568959/1‑93 (MQ=255)

                                                        cTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTaa                                 <  2:5238380/93‑1 (MQ=255)

                                                         tCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAAt                                >  1:3139815/1‑93 (MQ=255)

                                                         tCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAAt                                <  2:390977/93‑1 (MQ=255)

                                                            aGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCtt                             <  1:413073/93‑1 (MQ=255)

                                                            aGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCtt                             <  2:766031/93‑1 (MQ=255)

                                                             gTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCttt                            <  2:5830695/93‑1 (MQ=255)

                                                             gTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCttt                            >  1:3046159/1‑93 (MQ=255)

                                                               cACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCg                          <  1:6757781/93‑1 (MQ=255)

                                                               cACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCg                          >  2:6182060/1‑93 (MQ=255)

                                                                aCGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCgg                         >  1:2521914/1‑93 (MQ=255)

                                                                 cGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGt                        <  2:2816651/93‑1 (MQ=255)

                                                                  gCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGta                       <  2:7309549/93‑1 (MQ=255)

                                                                  gCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGta                       <  1:3232920/93‑1 (MQ=255)

                                                                  gCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGta                       <  1:7330086/93‑1 (MQ=255)

                                                                   cTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGtaa                      >  2:1815860/1‑93 (MQ=255)

                                                                    tttGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGtaat                     >  1:6889886/1‑93 (MQ=255)

                                                                     ttGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGtaata                    <  2:3435601/93‑1 (MQ=255)

                                                                      tGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGtaataa                   <  2:7071305/93‑1 (MQ=255)

                                                                        cGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAataata                 <  2:5102242/93‑1 (MQ=255)

                                                                        cGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAataata                 <  1:597218/93‑1 (MQ=255)

                                                                         gACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATAc                >  2:5575618/1‑93 (MQ=255)

                                                                            aTCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACttt             <  1:3855860/93‑1 (MQ=255)

                                                                             tCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTg            >  1:531321/1‑93 (MQ=255)

                                                                             tCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTg            >  2:6949383/1‑93 (MQ=255)

                                                                                 gCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGa        >  1:1096230/1‑93 (MQ=255)

                                                                                 gCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGa        <  2:1251215/93‑1 (MQ=255)

                                                                                 gCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGa        >  1:6365607/1‑93 (MQ=255)

                                                                                 gCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGa        >  2:3509916/1‑93 (MQ=255)

                                                                                  ccACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGAt       <  2:2140258/93‑1 (MQ=255)

                                                                                   cacaTGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGAtt      >  2:6846605/1‑93 (MQ=255)

                                                                                   cacaTGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGAtt      <  1:3990186/93‑1 (MQ=255)

                                                                                    acaTGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGAttt     >  2:4955669/1‑93 (MQ=255)

                                                                                    acaTGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGAttt     >  1:283569/1‑93 (MQ=255)

                                                                                     caTGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTg    >  1:974230/1‑93 (MQ=255)

                                                                                     caTGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTg    <  1:6049510/93‑1 (MQ=255)

                                                                                     caTGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTg    <  1:6155654/93‑1 (MQ=255)

                                                                                       tGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGAc  <  2:6003115/93‑1 (MQ=255)

                                                                                       tGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGAc  >  2:622968/1‑93 (MQ=255)

CGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGAC  >  NC_000913/3726391‑3726570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAA  >  NC_000913/3726388‑3726574

CTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGC                                                                                               >  SRR4302542.2540849/1‑94 (MQ=60)

CTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGC                                                                                               >  SRR4302542.1177653/1‑94 (MQ=60)

CTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGC                                                                                               >  SRR4302542.4071027/1‑94 (MQ=60)

CTTCGTATAAGGCGGCGATCTGGTCACGGGATAAGGCCCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGC                                                                                               <  SRR4302542.1249642/94‑1 (MQ=60)

 ttctgATAATGCGGGAATCTGGCCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCG                                                                                              <  SRR4302542.4636493/89‑1 (MQ=60)

 TTCGTATAATGGGGGCATCTGGTCACGAGATAAGTCGAAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCG                                                                                              <  SRR4302542.6239716/94‑1 (MQ=60)

 TTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCG                                                                                              <  SRR4302542.575341/94‑1 (MQ=60)

 TTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCG                                                                                              <  SRR4302542.4636492/94‑1 (MQ=60)

   CGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCC                                                                                            >  SRR4302542.3027917/1‑94 (MQ=60)

    GTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCA                                                                                           >  SRR4302542.4174307/1‑94 (MQ=60)

    GTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCA                                                                                           >  SRR4302542.5853756/1‑94 (MQ=60)

     TATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAG                                                                                          >  SRR4302542.4870359/1‑94 (MQ=60)

      ATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGC                                                                                         >  SRR4302542.363088/1‑94 (MQ=60)

      ATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGC                                                                                         >  SRR4302542.5533176/1‑94 (MQ=60)

        TATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTG                                                                                       >  SRR4302542.6199945/1‑94 (MQ=60)

        AATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTG                                                                                       >  SRR4302542.659124/1‑94 (MQ=60)

        AATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTG                                                                                       <  SRR4302542.91347/94‑1 (MQ=60)

        AATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTG                                                                                       >  SRR4302542.6778729/1‑94 (MQ=60)

         ATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGC                                                                                      >  SRR4302542.6335339/1‑94 (MQ=60)

         ATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGC                                                                                      >  SRR4302542.5434792/1‑94 (MQ=60)

          TGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCG                                                                                     <  SRR4302542.4349999/94‑1 (MQ=60)

          TGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCG                                                                                     >  SRR4302542.7236318/1‑94 (MQ=60)

          GGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCG                                                                                     <  SRR4302542.5038615/94‑1 (MQ=60)

            CGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTC                                                                                   >  SRR4302542.2033016/1‑94 (MQ=60)

             GGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCA                                                                                  <  SRR4302542.5907925/94‑1 (MQ=60)

             GGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCA                                                                                  <  SRR4302542.4176802/94‑1 (MQ=60)

              GGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAG                                                                                 <  SRR4302542.2652595/94‑1 (MQ=60)

                CATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGAC                                                                               >  SRR4302542.5589386/1‑94 (MQ=60)

                CATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGAC                                                                               <  SRR4302542.2870770/94‑1 (MQ=60)

                 ATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACA                                                                              >  SRR4302542.2420937/1‑94 (MQ=60)

                 ATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACA                                                                              >  SRR4302542.2477504/1‑94 (MQ=60)

                 ATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACA                                                                              >  SRR4302542.2195172/1‑94 (MQ=60)

                  tttgttaacaggataggtcgaAAGCCTGCAGCATGCCGTCTCTCCAGTCACGCTTTGCGACATCCAGCCACATGGCCCCAGCTGCGTCAGACAT                                                                             <  SRR4302542.705202/73‑1 (MQ=60)

                  TCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACAT                                                                             >  SRR4302542.4352948/1‑94 (MQ=60)

                   CTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATA                                                                            <  SRR4302542.1006193/94‑1 (MQ=60)

                    TGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCCCTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATAT                                                                           <  SRR4302542.2790679/94‑1 (MQ=60)

                     GGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATC                                                                          >  SRR4302542.5826607/1‑94 (MQ=60)

                     GGTCACGAGATAAGTCGCAAACCTGCAGCATGACGTCACTCCAGTTACGCTTTTCGACATCCAGCCACATGGCGGCAGCTGCGTCCGACATATC                                                                          >  SRR4302542.2390221/1‑94 (MQ=60)

                      GTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCG                                                                         >  SRR4302542.1844389/1‑94 (MQ=60)

                        CACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCT                                                                       >  SRR4302542.2296901/1‑94 (MQ=60)

                        CACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCT                                                                       >  SRR4302542.1362949/1‑94 (MQ=60)

                        CACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCT                                                                       >  SRR4302542.3405276/1‑94 (MQ=60)

                        CACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCT                                                                       <  SRR4302542.6072017/94‑1 (MQ=60)

                        CACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCT                                                                       >  SRR4302542.1655454/1‑94 (MQ=60)

                         ACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTG                                                                      >  SRR4302542.1332620/1‑94 (MQ=60)

                         ACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTG                                                                      <  SRR4302542.5656785/94‑1 (MQ=60)

                          CGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGG                                                                     >  SRR4302542.4824726/1‑94 (MQ=60)

                          CGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGG                                                                     <  SRR4302542.6959149/94‑1 (MQ=60)

                          CGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGG                                                                     <  SRR4302542.4502710/94‑1 (MQ=60)

                           GAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGC                                                                    >  SRR4302542.234348/1‑94 (MQ=60)

                           GAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGC                                                                    >  SRR4302542.4361660/1‑94 (MQ=60)

                           GAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGC                                                                    <  SRR4302542.4390452/94‑1 (MQ=60)

                           GAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGC                                                                    <  SRR4302542.6434529/94‑1 (MQ=60)

                            AGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCA                                                                   >  SRR4302542.4494881/1‑94 (MQ=60)

                             GATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAA                                                                  >  SRR4302542.30622/1‑94 (MQ=60)

                             GAAAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAA                                                                  <  SRR4302542.2734289/94‑1 (MQ=60)

                              ATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAA                                                                 >  SRR4302542.5697441/1‑94 (MQ=60)

                               TAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAAC                                                                >  SRR4302542.6973984/1‑94 (MQ=60)

                               TAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCAAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAAC                                                                <  SRR4302542.1727008/94‑1 (MQ=60)

                                AAGTCGCAAGCCTGCAGCATGACGTCTCTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACT                                                               <  SRR4302542.2896378/94‑1 (MQ=60)

                                AAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACT                                                               >  SRR4302542.4264966/1‑94 (MQ=60)

                                AAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACT                                                               <  SRR4302542.6757394/94‑1 (MQ=60)

                                AAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACT                                                               >  SRR4302542.36611/1‑94 (MQ=60)

                                AAGTCCCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACT                                                               <  SRR4302542.6106914/94‑1 (MQ=60)

                                 AGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTC                                                              >  SRR4302542.3775712/1‑94 (MQ=60)

                                  GTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCC                                                             <  SRR4302542.6481608/94‑1 (MQ=60)

                                  GTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCC                                                             >  SRR4302542.1051765/1‑94 (MQ=60)

                                   TCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCC                                                            >  SRR4302542.3920668/1‑94 (MQ=60)

                                     GCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCC                                                          <  SRR4302542.3543027/94‑1 (MQ=60)

                                     GCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCC                                                          <  SRR4302542.4211227/94‑1 (MQ=60)

                                     GCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCC                                                          <  SRR4302542.3654196/94‑1 (MQ=60)

                                     GCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGACAAACTCCCCC                                                          <  SRR4302542.4595344/94‑1 (MQ=60)

                                      CAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCG                                                         >  SRR4302542.939160/1‑94 (MQ=60)

                                         GCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCA                                                      >  SRR4302542.674234/1‑94 (MQ=60)

                                         GCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCA                                                      <  SRR4302542.605784/94‑1 (MQ=60)

                                          CCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCAT                                                     <  SRR4302542.1980627/94‑1 (MQ=60)

                                          CCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCAT                                                     <  SRR4302542.1381468/94‑1 (MQ=60)

                                          CCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCAT                                                     >  SRR4302542.1709144/1‑94 (MQ=60)

                                           CTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGCCATA                                                    >  SRR4302542.403391/1‑94 (MQ=60)

                                           CTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATA                                                    >  SRR4302542.5618469/1‑94 (MQ=60)

                                           CTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATA                                                    >  SRR4302542.1313983/1‑94 (MQ=60)

                                           CTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATA                                                    >  SRR4302542.2467990/1‑94 (MQ=60)

                                            TGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATAC                                                   <  SRR4302542.5451779/94‑1 (MQ=60)

                                            TGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATAC                                                   >  SRR4302542.5818623/1‑94 (MQ=60)

                                             GCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCGGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACG                                                  <  SRR4302542.4739190/94‑1 (MQ=60)

                                             GCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACG                                                  >  SRR4302542.4376531/1‑94 (MQ=60)

                                              CAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGC                                                 >  SRR4302542.1536713/1‑94 (MQ=60)

                                              CAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGC                                                 >  SRR4302542.4431352/1‑94 (MQ=60)

                                               AGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCA                                                >  SRR4302542.6415730/1‑94 (MQ=60)

                                                GCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAG                                               <  SRR4302542.6995388/94‑1 (MQ=60)

                                                GCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAG                                               <  SRR4302542.7173945/94‑1 (MQ=60)

                                                GCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAG                                               <  SRR4302542.5394499/94‑1 (MQ=60)

                                                GCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAG                                               >  SRR4302542.5990138/1‑94 (MQ=60)

                                                 CATGACGTCCCTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGA                                              <  SRR4302542.6705242/94‑1 (MQ=60)

                                                  ATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGAC                                             >  SRR4302542.3339693/1‑94 (MQ=60)

                                                  ATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGAC                                             >  SRR4302542.1201488/1‑94 (MQ=60)

                                                  ATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGAC                                             >  SRR4302542.7322490/1‑94 (MQ=60)

                                                   TGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACG                                            <  SRR4302542.1563683/94‑1 (MQ=60)

                                                      CGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAA                                         <  SRR4302542.4072837/94‑1 (MQ=60)

                                                       GTCCCTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAG                                        <  SRR4302542.29122/94‑1 (MQ=60)

                                                       GTCCCTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAG                                        <  SRR4302542.537622/94‑1 (MQ=60)

                                                       GTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAG                                        >  SRR4302542.6856232/1‑94 (MQ=60)

                                                       GTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAG                                        <  SRR4302542.3515836/94‑1 (MQ=60)

                                                       GTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAG                                        <  SRR4302542.3616075/94‑1 (MQ=60)

                                                       GTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAG                                        <  SRR4302542.4715523/94‑1 (MQ=60)

                                                       GTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAG                                        <  SRR4302542.1613802/94‑1 (MQ=60)

                                                         CACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTA                                      >  SRR4302542.3367791/1‑94 (MQ=60)

                                                         CACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTA                                      >  SRR4302542.7421332/1‑94 (MQ=60)

                                                         CACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTA                                      <  SRR4302542.7093632/94‑1 (MQ=60)

                                                         CACTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTA                                      <  SRR4302542.2816183/94‑1 (MQ=60)

                                                           CTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAAT                                    <  SRR4302542.7068913/94‑1 (MQ=60)

                                                           CTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAAT                                    <  SRR4302542.4256821/94‑1 (MQ=60)

                                                           CTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAAT                                    >  SRR4302542.1300326/1‑94 (MQ=60)

                                                           CTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAAT                                    <  SRR4302542.6476395/94‑1 (MQ=60)

                                                           CTCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAAT                                    >  SRR4302542.3169659/1‑94 (MQ=60)

                                                            TCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATC                                   <  SRR4302542.7443418/94‑1 (MQ=60)

                                                            TCCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATC                                   <  SRR4302542.3023580/94‑1 (MQ=60)

                                                             CCAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCT                                  >  SRR4302542.4607217/1‑94 (MQ=60)

                                                              CAGTCACGCTTTGCTACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTT                                 <  SRR4302542.6251159/94‑1 (MQ=60)

                                                              CAGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTT                                 >  SRR4302542.2115827/1‑94 (MQ=60)

                                                               AGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTT                                >  SRR4302542.2546909/1‑94 (MQ=60)

                                                               AGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTT                                >  SRR4302542.3075242/1‑94 (MQ=60)

                                                               AGTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTT                                <  SRR4302542.416627/94‑1 (MQ=60)

                                                                GTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTC                               >  SRR4302542.1609016/1‑94 (MQ=60)

                                                                GTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTC                               <  SRR4302542.5259525/94‑1 (MQ=60)

                                                                GTCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTC                               <  SRR4302542.3504240/94‑1 (MQ=60)

                                                                 TCACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCG                              <  SRR4302542.1376387/94‑1 (MQ=60)

                                                                 TCACGCTTGGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCG                              <  SRR4302542.1099542/94‑1 (MQ=60)

                                                                  CACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGG                             <  SRR4302542.6824254/94‑1 (MQ=60)

                                                                  CACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGG                             <  SRR4302542.7585873/94‑1 (MQ=60)

                                                                  CACGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGG                             >  SRR4302542.2546373/1‑94 (MQ=60)

                                                                    CGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTA                           >  SRR4302542.3232924/1‑94 (MQ=60)

                                                                    CGCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTA                           <  SRR4302542.3120092/94‑1 (MQ=60)

                                                                     GCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAA                          <  SRR4302542.3263493/94‑1 (MQ=60)

                                                                     GCTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAA                          <  SRR4302542.7401894/94‑1 (MQ=60)

                                                                      CTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAAT                         >  SRR4302542.2151751/1‑94 (MQ=60)

                                                                      CTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAAT                         >  SRR4302542.6957552/1‑94 (MQ=60)

                                                                      CTTTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAAT                         <  SRR4302542.2746019/94‑1 (MQ=60)

                                                                        TTGCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAA                       <  SRR4302542.168193/94‑1 (MQ=60)

                                                                          GCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATA                     <  SRR4302542.4157972/94‑1 (MQ=60)

                                                                          GCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATA                     <  SRR4302542.6740135/94‑1 (MQ=60)

                                                                          GCGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATA                     <  SRR4302542.5772704/94‑1 (MQ=60)

                                                                           CGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATAC                    <  SRR4302542.6132412/94‑1 (MQ=60)

                                                                           CGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATAC                    >  SRR4302542.1447709/1‑94 (MQ=60)

                                                                           CGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATAC                    <  SRR4302542.602367/94‑1 (MQ=60)

                                                                           CGACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATAC                    <  SRR4302542.2481377/94‑1 (MQ=60)

                                                                            GACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACT                   <  SRR4302542.6948116/94‑1 (MQ=60)

                                                                             ACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTT                  <  SRR4302542.3193069/94‑1 (MQ=60)

                                                                             ACATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTT                  <  SRR4302542.1088104/94‑1 (MQ=60)

                                                                              CATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTT                 <  SRR4302542.6920293/94‑1 (MQ=60)

                                                                               ATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTG                >  SRR4302542.5695825/1‑94 (MQ=60)

                                                                               ATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTG                <  SRR4302542.921897/94‑1 (MQ=60)

                                                                               ATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTG                <  SRR4302542.3893951/94‑1 (MQ=60)

                                                                               ATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTG                <  SRR4302542.1456160/94‑1 (MQ=60)

                                                                               ATCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTG                >  SRR4302542.535910/1‑94 (MQ=60)

                                                                                TCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGT               >  SRR4302542.1384984/1‑94 (MQ=60)

                                                                                TCCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGT               <  SRR4302542.4333359/94‑1 (MQ=60)

                                                                                 CCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTC              <  SRR4302542.3977658/94‑1 (MQ=60)

                                                                                 CCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTC              >  SRR4302542.3234198/1‑94 (MQ=60)

                                                                                 CCAGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTC              >  SRR4302542.7046414/1‑94 (MQ=60)

                                                                                   AGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGA            >  SRR4302542.4962011/1‑94 (MQ=60)

                                                                                   AGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGA            >  SRR4302542.4632578/1‑94 (MQ=60)

                                                                                   AGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGA            >  SRR4302542.1105620/1‑94 (MQ=60)

                                                                                   AGCCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGA            >  SRR4302542.6428294/1‑94 (MQ=60)

                                                                                     CCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATT          >  SRR4302542.3784954/1‑94 (MQ=60)

                                                                                     CCACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATT          <  SRR4302542.3473683/94‑1 (MQ=60)

                                                                                      CACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTT         >  SRR4302542.286040/1‑94 (MQ=60)

                                                                                      CACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTT         <  SRR4302542.3123718/94‑1 (MQ=60)

                                                                                      CACATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTT         <  SRR4302542.4029556/94‑1 (MQ=60)

                                                                                       ACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTG        >  SRR4302542.982623/1‑94 (MQ=60)

                                                                                        CATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGA       <  SRR4302542.6108063/94‑1 (MQ=60)

                                                                                        CATGGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGA       <  SRR4302542.6215260/94‑1 (MQ=60)

                                                                                           GGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGG    <  SRR4302542.5417240/94‑1 (MQ=60)

                                                                                           GGCGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGG    <  SRR4302542.5622636/94‑1 (MQ=60)

                                                                                             CGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAA  <  SRR4302542.671380/94‑1 (MQ=60)

                                                                                             CGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAA  >  SRR4302542.175774/1‑94 (MQ=60)

CTTCGTATAATGCGGGCATCTGGTCACGAGATAAGTCGCAAGCCTGCAGCATGACGTCACTCCAGTCACGCTTTGCGACATCCAGCCACATGGTGCCAGCTGCGTCAGACATATCGCTGGCAAACTCCCCCGTCATACGCAGACGCAAGTAATCTTTCGGTAATAATACTTTGTCGATTTGACGGAA  >  NC_000913/3726388‑3726574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`