Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,754,708 |
G→A |
L249L (CTC→CTT) |
yiaY ← |
putative oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,754,708 | 0 | G | A | 83.5%
| 922.3
/ 125.1
| 345 | L249L (CTC→CTT) | yiaY | putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (34/23); new base A (145/143); total (179/166) |
| Fisher's exact test for biased strand distribution p-value = 2.46e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01 |
Only 100 of 345 total aligned reads displayed.
TACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCAC > NC_000913/3754618‑3754797
|
tacaCCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAg < 1:4149941/93‑1 (MQ=255)
tacaCCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAg > 1:3006627/1‑93 (MQ=255)
tacaCCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAg < 2:6866458/93‑1 (MQ=255)
tacaCCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAg > 2:6780455/1‑93 (MQ=255)
acacCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAgg > 1:1181235/1‑93 (MQ=255)
acacCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAgg < 1:5152190/93‑1 (MQ=255)
cacCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGa > 2:4487368/1‑93 (MQ=255)
acCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGaa > 1:1617478/1‑93 (MQ=255)
ccGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAAc < 1:6445193/93‑1 (MQ=255)
cGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACt < 1:5371816/93‑1 (MQ=255)
cGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACt < 1:2904104/93‑1 (MQ=255)
gtgGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTggg < 1:6128230/93‑1 (MQ=255)
ggCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCa < 2:5297614/93‑1 (MQ=255)
gCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCAt > 1:6264024/1‑93 (MQ=255)
gctGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGc < 2:6936217/91‑1 (MQ=255)
gTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCAt < 2:7504935/93‑1 (MQ=255)
gTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCAt > 1:2633697/1‑93 (MQ=255)
tAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGCCATAAGCCAtt < 1:2538362/93‑1 (MQ=255)
tAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGAAACTGGGCATAAGCCAtt > 1:6344263/1‑93 (MQ=255)
aGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTg > 1:5638140/1‑93 (MQ=255)
gAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGc < 2:3948218/93‑1 (MQ=255)
gAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGc > 2:1321282/1‑93 (MQ=255)
gAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGc > 2:1735208/1‑93 (MQ=255)
aaCCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCtt < 1:2271797/93‑1 (MQ=255)
aCCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTc < 2:1642833/93‑1 (MQ=255)
aCCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTc < 1:6881720/93‑1 (MQ=255)
ccGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCa > 2:5672207/1‑93 (MQ=255)
ccGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCa > 2:6014403/1‑93 (MQ=255)
cccAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCAcgc < 2:5234631/93‑1 (MQ=255)
ccAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCAcgcg > 1:4382752/1‑93 (MQ=255)
cAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACgcgc > 2:6700873/1‑93 (MQ=255)
cAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACgcgc > 2:4210998/1‑93 (MQ=255)
cTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCttt < 1:1387409/93‑1 (MQ=255)
gTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGc > 2:2250512/1‑93 (MQ=255)
cgcCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCAtt < 2:6284392/93‑1 (MQ=255)
cgcCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCAtt < 2:5075269/93‑1 (MQ=255)
ccATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTAc < 1:1037296/93‑1 (MQ=255)
cATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACt < 2:5177043/93‑1 (MQ=255)
cATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACt > 2:5467532/1‑93 (MQ=255)
cATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACt < 1:4460988/93‑1 (MQ=255)
aTCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTg > 2:2895196/1‑93 (MQ=255)
aTCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTg > 2:1974405/1‑93 (MQ=255)
aTCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTg > 2:6548922/1‑93 (MQ=255)
tCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGc > 1:5507931/1‑93 (MQ=255)
tCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGc < 1:6691450/93‑1 (MQ=255)
gCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCa < 1:179872/93‑1 (MQ=255)
cATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCAt < 2:1045932/93‑1 (MQ=255)
cATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCAt < 1:1515201/93‑1 (MQ=255)
aTGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATc > 1:3355383/1‑93 (MQ=255)
aTGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATc > 1:4075549/1‑93 (MQ=255)
aTGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATc > 2:1814685/1‑93 (MQ=255)
aTGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATc < 2:3105194/93‑1 (MQ=255)
gAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCtt > 1:3179090/1‑93 (MQ=255)
aaCATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTc > 1:3538091/1‑93 (MQ=255)
aaCATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTc < 2:6592372/93‑1 (MQ=255)
aCATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCa > 1:3912421/1‑93 (MQ=255)
cATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCaa < 2:150782/93‑1 (MQ=255)
cATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCaa < 2:1780463/93‑1 (MQ=255)
aTAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAAc < 2:4221756/93‑1 (MQ=255)
tAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACg > 1:4158604/1‑93 (MQ=255)
aaCCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCCTTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACgg > 1:5785989/1‑93 (MQ=255)
aaCCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACgg < 1:4408916/93‑1 (MQ=255)
aCCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGc > 1:855285/1‑93 (MQ=255)
cccAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCt > 1:4742648/1‑93 (MQ=255)
cccAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCt < 1:1129173/93‑1 (MQ=255)
ccAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTa > 2:2451392/1‑93 (MQ=255)
ccAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTa > 1:7266424/1‑93 (MQ=255)
cAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTaa < 1:6519065/93‑1 (MQ=255)
agagAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAAc < 2:4582470/93‑1 (MQ=255)
gagaAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACg < 2:921596/93‑1 (MQ=255)
gaAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGc > 2:381001/1‑93 (MQ=255)
gaAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGc > 2:4045211/1‑93 (MQ=255)
gaAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCCTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACggt > 2:4921362/1‑92 (MQ=255)
gCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAgg > 2:7148318/1‑93 (MQ=255)
gCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAgg > 2:5626287/1‑93 (MQ=255)
cATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAggg > 1:6812199/1‑92 (MQ=255)
ttattGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGttt > 1:3726066/1‑93 (MQ=255)
tattGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGtttt < 2:555191/93‑1 (MQ=255)
attGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTc < 2:3218473/93‑1 (MQ=255)
attGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTc < 1:2066342/93‑1 (MQ=255)
attGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTc < 2:6174447/93‑1 (MQ=255)
gAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTTTCGGc > 1:3976000/1‑93 (MQ=255)
aaCGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCa < 2:7423659/93‑1 (MQ=255)
aaCGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGCTTTCGGCa > 1:1958275/1‑93 (MQ=255)
aCGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCaa < 2:1879795/93‑1 (MQ=255)
cGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAAt < 2:5849075/93‑1 (MQ=255)
gCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATc < 1:4966103/93‑1 (MQ=255)
gCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTTTCGGCAATc > 1:717550/1‑93 (MQ=255)
cATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCAt < 2:3586796/93‑1 (MQ=255)
cATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTGTTCGGCGATCAt > 1:7487272/1‑93 (MQ=255)
tACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATgg > 1:7052348/1‑93 (MQ=255)
tACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATgg > 2:1189015/1‑93 (MQ=255)
aCCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTTTCGGCAATCATggg > 1:5277563/1‑92 (MQ=255)
ccGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTc > 2:2706255/1‑93 (MQ=255)
cGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCa > 2:2649049/1‑93 (MQ=255)
cGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCa < 2:3006512/93‑1 (MQ=255)
cGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCa < 2:7024868/93‑1 (MQ=255)
cGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCa < 1:1677473/93‑1 (MQ=255)
ggCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCAc > 1:258571/1‑93 (MQ=255)
ggCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTTTCGGCAATCATGGTCAc > 2:3311375/1‑93 (MQ=255)
|
TACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCAC > NC_000913/3754618‑3754797
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCACGGCT > NC_000913/3754616‑3754801
|
CATACACCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAA > SRR4302542.1459802/1‑94 (MQ=60)
ATACACCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAG > SRR4302542.3035375/1‑94 (MQ=60)
TACACCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGG < SRR4302542.4190814/94‑1 (MQ=60)
TACACCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGG > SRR4302542.1191434/1‑94 (MQ=60)
ACACCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGA > SRR4302542.5115354/1‑94 (MQ=60)
ACACCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGA < SRR4302542.5202266/94‑1 (MQ=60)
CACCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAA > SRR4302542.1631449/1‑94 (MQ=60)
CACCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAA > SRR4302542.6629354/1‑94 (MQ=60)
ACCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAAC < SRR4302542.6525867/94‑1 (MQ=60)
ACCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAAC < SRR4302542.6980001/94‑1 (MQ=60)
CCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACT < SRR4302542.6508665/94‑1 (MQ=60)
CCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACT > SRR4302542.4088892/1‑94 (MQ=60)
CCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACT > SRR4302542.886463/1‑94 (MQ=60)
CCGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACT < SRR4302542.5006450/94‑1 (MQ=60)
CGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTG > SRR4302542.3463865/1‑94 (MQ=60)
CGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTG < SRR4302542.2931975/94‑1 (MQ=60)
CGTGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTG < SRR4302542.5424019/94‑1 (MQ=60)
GTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGG > SRR4302542.5804517/1‑94 (MQ=60)
TGTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGG < SRR4302542.4158225/94‑1 (MQ=60)
GTGGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGC < SRR4302542.6187524/94‑1 (MQ=60)
TGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCA > SRR4302542.5263462/1‑94 (MQ=60)
GGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCAT > SRR4302542.3977150/1‑94 (MQ=60)
GGCAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCAT > SRR4302542.6325750/1‑94 (MQ=60)
CAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAA > SRR4302542.7136591/1‑94 (MQ=60)
CAGGCTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAA > SRR4302542.5335916/1‑94 (MQ=60)
CTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCA > SRR4302542.3890929/1‑94 (MQ=60)
CTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCA > SRR4302542.3240078/1‑94 (MQ=60)
TGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCAT > SRR4302542.2659137/1‑94 (MQ=60)
GTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATT < SRR4302542.6544683/94‑1 (MQ=60)
GTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGAAACTGGGCATAAGCCATT > SRR4302542.6406766/1‑94 (MQ=60)
GTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACC‑GCAAGGAACTGGGCATAAGCCATTG > SRR4302542.3751427/1‑94 (MQ=60)
TAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTG > SRR4302542.5692893/1‑94 (MQ=60)
TAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTG < SRR4302542.2054155/94‑1 (MQ=60)
TAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGCCATAAGCCATTG < SRR4302542.2562974/94‑1 (MQ=60)
AAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTT > SRR4302542.1156609/1‑94 (MQ=60)
AAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTT > SRR4302542.1359605/1‑94 (MQ=60)
AAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTT < SRR4302542.1852873/94‑1 (MQ=60)
AACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTC < SRR4302542.5420294/94‑1 (MQ=60)
AACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTC > SRR4302542.2221883/1‑94 (MQ=60)
AACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTC < SRR4302542.2291330/94‑1 (MQ=60)
AACCGCCCAGCTGGTGCGCCATCACATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTC > SRR4302542.4478965/1‑94 (MQ=60)
ACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCA < SRR4302542.6949315/94‑1 (MQ=60)
ACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCA < SRR4302542.2016903/94‑1 (MQ=60)
CCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCAC < SRR4302542.1383292/94‑1 (MQ=60)
CCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCAC < SRR4302542.5762254/94‑1 (MQ=60)
CGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACG < SRR4302542.3980853/94‑1 (MQ=60)
CGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACG < SRR4302542.158464/94‑1 (MQ=60)
CGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACG < SRR4302542.4127348/94‑1 (MQ=60)
GCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGC > SRR4302542.4757907/1‑94 (MQ=60)
GCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGC < SRR4302542.7287692/94‑1 (MQ=60)
CCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCG > SRR4302542.4425763/1‑94 (MQ=60)
CCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGAATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCG < SRR4302542.7548280/94‑1 (MQ=60)
CCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGC > SRR4302542.1587221/1‑94 (MQ=60)
CAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCT > SRR4302542.3609810/1‑94 (MQ=60)
CAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCT > SRR4302542.3107271/1‑94 (MQ=60)
AGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTT > SRR4302542.1298504/1‑94 (MQ=60)
CTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTC < SRR4302542.7080383/94‑1 (MQ=60)
CTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTC < SRR4302542.4500687/94‑1 (MQ=60)
CTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTC < SRR4302542.1399394/94‑1 (MQ=60)
CTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTC > SRR4302542.4124731/1‑94 (MQ=60)
CTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTC < SRR4302542.5973641/94‑1 (MQ=60)
CTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTC < SRR4302542.1887983/94‑1 (MQ=60)
TGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCG < SRR4302542.7479490/94‑1 (MQ=60)
TGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCG < SRR4302542.1743322/94‑1 (MQ=60)
GGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGC < SRR4302542.842977/94‑1 (MQ=60)
GTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCA < SRR4302542.1066423/94‑1 (MQ=60)
TGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCAT > SRR4302542.637292/1‑94 (MQ=60)
TGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCAT < SRR4302542.2663346/94‑1 (MQ=60)
CGCCTTCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATCGCTTCACGCGCTTTCGCATTA < SRR4302542.6589863/94‑1 (MQ=60)
CGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTA > SRR4302542.5209543/1‑94 (MQ=60)
CGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTA < SRR4302542.4388012/94‑1 (MQ=60)
CGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTA < SRR4302542.1703077/94‑1 (MQ=60)
GCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTAC > SRR4302542.5654601/1‑94 (MQ=60)
GCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTAC < SRR4302542.7271137/94‑1 (MQ=60)
GCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTAC < SRR4302542.4040382/94‑1 (MQ=60)
GCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTAC > SRR4302542.1668111/1‑94 (MQ=60)
GCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTAC < SRR4302542.3863724/94‑1 (MQ=60)
CCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACT < SRR4302542.1046209/94‑1 (MQ=60)
CCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACT < SRR4302542.6403359/94‑1 (MQ=60)
CATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTG < SRR4302542.4775811/94‑1 (MQ=60)
CATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTG > SRR4302542.2577001/1‑94 (MQ=60)
CATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTG > SRR4302542.1100879/1‑94 (MQ=60)
CATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTG > SRR4302542.3036707/1‑94 (MQ=60)
CATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTG < SRR4302542.4504746/94‑1 (MQ=60)
CATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTG > SRR4302542.2424768/1‑94 (MQ=60)
ATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGC > SRR4302542.4427900/1‑94 (MQ=60)
ATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGC > SRR4302542.4427899/1‑94 (MQ=60)
ATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGC > SRR4302542.5561455/1‑94 (MQ=60)
ATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGC > SRR4302542.5496879/1‑94 (MQ=60)
ATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGC > SRR4302542.3320714/1‑94 (MQ=60)
TCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCC < SRR4302542.6757363/94‑1 (MQ=60)
GCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCAT < SRR4302542.181399/94‑1 (MQ=60)
GCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCAT > SRR4302542.2434882/1‑94 (MQ=60)
GCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCAT < SRR4302542.3466253/94‑1 (MQ=60)
GCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCAT > SRR4302542.6247890/1‑94 (MQ=60)
CATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATC > SRR4302542.3386941/1‑94 (MQ=60)
CATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATC > SRR4302542.3056020/1‑94 (MQ=60)
CATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATC > SRR4302542.4115724/1‑94 (MQ=60)
CATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATC > SRR4302542.6790689/1‑94 (MQ=60)
CATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATC < SRR4302542.1528290/94‑1 (MQ=60)
TGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTT > SRR4302542.3209218/1‑94 (MQ=60)
GAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTC > SRR4302542.3571157/1‑94 (MQ=60)
AACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCA > SRR4302542.3951035/1‑94 (MQ=60)
CATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAAC < SRR4302542.6110073/94‑1 (MQ=60)
CATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAAC < SRR4302542.4295345/94‑1 (MQ=60)
ATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACG < SRR4302542.5985453/94‑1 (MQ=60)
ATAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACG > SRR4302542.4199549/1‑94 (MQ=60)
TAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCCTTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGG > SRR4302542.5842164/1‑94 (MQ=60)
TAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGG < SRR4302542.1146087/94‑1 (MQ=60)
TAACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGG < SRR4302542.534533/94‑1 (MQ=60)
AACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGC > SRR4302542.862658/1‑94 (MQ=60)
AACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGC > SRR4302542.6891881/1‑94 (MQ=60)
AACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGC < SRR4302542.4452209/94‑1 (MQ=60)
AACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGC < SRR4302542.1640617/94‑1 (MQ=60)
ACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCT > SRR4302542.5095967/1‑94 (MQ=60)
ACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCT > SRR4302542.4788884/1‑94 (MQ=60)
ACCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCT > SRR4302542.2171942/1‑94 (MQ=60)
CCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTA > SRR4302542.5522494/1‑94 (MQ=60)
CCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTA > SRR4302542.4191734/1‑94 (MQ=60)
CCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTA < SRR4302542.1709488/94‑1 (MQ=60)
CCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTA < SRR4302542.1138808/94‑1 (MQ=60)
CCCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTA > SRR4302542.7337653/1‑94 (MQ=60)
CCAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAA < SRR4302542.6505373/94‑1 (MQ=60)
CAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAAC < SRR4302542.6583307/94‑1 (MQ=60)
CAGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAAC > SRR4302542.5589840/1‑94 (MQ=60)
AGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACG > SRR4302542.1479152/1‑94 (MQ=60)
AGAGAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACG < SRR4302542.3554113/94‑1 (MQ=60)
AGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGC > SRR4302542.2575668/1‑94 (MQ=60)
GAAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCA > SRR4302542.2016398/1‑94 (MQ=60)
AAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAG > SRR4302542.4196683/1‑94 (MQ=60)
AAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAG > SRR4302542.680945/1‑94 (MQ=60)
AAGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAG < SRR4302542.6418623/94‑1 (MQ=60)
AGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGG < SRR4302542.499928/94‑1 (MQ=60)
AGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGG > SRR4302542.7165842/1‑94 (MQ=60)
AGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGG < SRR4302542.771213/94‑1 (MQ=60)
AGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGG > SRR4302542.6282646/1‑94 (MQ=60)
AGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGG > SRR4302542.445915/1‑94 (MQ=60)
AGCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGG < SRR4302542.6917075/94‑1 (MQ=60)
GCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGG > SRR4302542.6879166/1‑94 (MQ=60)
GCATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGT < SRR4302542.5660422/94‑1 (MQ=60)
CATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGT > SRR4302542.15577/1‑94 (MQ=60)
ATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTT > SRR4302542.2748315/1‑94 (MQ=60)
ATTATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTT > SRR4302542.3762961/1‑94 (MQ=60)
TTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTT > SRR4302542.4266331/1‑94 (MQ=60)
ATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCG < SRR4302542.2609101/94‑1 (MQ=60)
ATTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCG < SRR4302542.2084210/94‑1 (MQ=60)
TTGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGG < SRR4302542.4985978/94‑1 (MQ=60)
TGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGC > SRR4302542.7238852/1‑94 (MQ=60)
TGAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTTTCGGC > SRR4302542.4015228/1‑94 (MQ=60)
GAACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGCTTTCGGCA > SRR4302542.1975218/1‑94 (MQ=60)
ACGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAAT < SRR4302542.2996637/94‑1 (MQ=60)
CGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTTTTGGCAATC > SRR4302542.2643762/1‑94 (MQ=60)
CGCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTTTCGGCAATC > SRR4302542.723737/1‑94 (MQ=60)
GCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCA < SRR4302542.5014323/94‑1 (MQ=60)
GCCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCA < SRR4302542.6577926/94‑1 (MQ=60)
CCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCAT < SRR4302542.2983560/94‑1 (MQ=60)
CCATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTGTTCGGCGATCAT > SRR4302542.7560700/1‑94 (MQ=60)
CATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATG < SRR4302542.7456060/94‑1 (MQ=60)
CATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATG < SRR4302542.6938735/94‑1 (MQ=60)
CATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTTTCGGCAATCATG > SRR4302542.1428365/1‑94 (MQ=60)
ATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTTTCGGCAATCATGG > SRR4302542.6352893/1‑94 (MQ=60)
ATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGG > SRR4302542.7121579/1‑94 (MQ=60)
ATACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTTTCGGCAATTATGG > SRR4302542.2626264/1‑94 (MQ=60)
TACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTTTCGGCAATCATGGG > SRR4302542.5328846/1‑94 (MQ=60)
ACCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTTTCGGCAATCATGGTC > SRR4302542.3832479/1‑94 (MQ=60)
CCGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCA < SRR4302542.888942/94‑1 (MQ=60)
CGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCAC < SRR4302542.1691972/94‑1 (MQ=60)
CGGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCAC > SRR4302542.260774/1‑94 (MQ=60)
GGCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCACG < SRR4302542.2744144/94‑1 (MQ=60)
GCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCACGG > SRR4302542.3039614/1‑94 (MQ=60)
GCAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGGTTTTGGCAATCATGGTCACGG > SRR4302542.5907974/1‑94 (MQ=60)
CAAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCACGGC > SRR4302542.1284070/1‑94 (MQ=60)
AAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCACGGCT > SRR4302542.3966633/1‑94 (MQ=60)
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CATACACCGTGTGGCAGGTTGTAGAAACCGCCCAGCTGGTGCGCCATCGCATGAACATAACCCAGAGAAGCATTATTGAACGCCATACCGGCGAGGAACTGGGCATAAGCCATTGCTTCACGCGCTTTCGCATTACTGCCATCTTCAACGGCTAACGGCAGGTTTTCGGCAATCATGGTCACGGCT > NC_000913/3754616‑3754801
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
