Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,793,926	G→A	A107A (GCG→GCA)	rfaC →	heptosyl transferase I

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,793,926	0	G	A	83.3%	635.9 / 109.8	312	A107A (GCG→GCA)	rfaC	heptosyl transferase I
Reads supporting (aligned to +/- strand): ref base G (26/26); new base A (138/122); total (164/148)
Fisher's exact test for biased strand distribution p-value = 7.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.81e-08

Only 100 of 318 total aligned reads displayed.

GTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCA  >  NC_000913/3793836‑3794018

gTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGcaca                                                                                            >  2:2362445/1‑93 (MQ=255)

gTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGcaca                                                                                            >  1:6404918/1‑93 (MQ=255)

  ttCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGTGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATg                                                                                          <  1:6951896/93‑1 (MQ=255)

  ttCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATg                                                                                          >  2:2426463/1‑93 (MQ=255)

   tCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATgg                                                                                         <  1:3096551/93‑1 (MQ=255)

    cGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGc                                                                                        <  1:1371630/93‑1 (MQ=255)

       gAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTa                                                                                     >  1:6624042/1‑93 (MQ=255)

       gAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGAGCTGGTGACGCGTCTGGCGCATGGCGTa                                                                                     >  2:6194552/1‑93 (MQ=255)

        aaGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTaa                                                                                    <  1:5532038/93‑1 (MQ=255)

         aGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTaaa                                                                                   >  1:284928/1‑93 (MQ=255)

          gcgcTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAg                                                                                  >  1:5626180/1‑93 (MQ=255)

          gcgcTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAg                                                                                  >  2:1708557/1‑93 (MQ=255)

            gcTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAgca                                                                                >  1:4405766/1‑93 (MQ=255)

             cTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAgcat                                                                               <  2:6401977/93‑1 (MQ=255)

             cTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAgcat                                                                               <  2:5391762/93‑1 (MQ=255)

              tACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAgcatg                                                                              >  1:5680266/1‑93 (MQ=255)

              tACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAgcatg                                                                              <  1:4161647/93‑1 (MQ=255)

              tACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAgcatg                                                                              >  1:4012685/1‑93 (MQ=255)

               aCAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAgcatgg                                                                             >  2:6534334/1‑93 (MQ=255)

                cAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAgcatggc                                                                            <  2:7272731/93‑1 (MQ=255)

                 aaGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAgcatggca                                                                           <  2:1093921/93‑1 (MQ=255)

                  aGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAgcatggcat                                                                          >  2:5789393/1‑93 (MQ=255)

                   gCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAgcatggcatg                                                                         >  1:2119590/1‑93 (MQ=255)

                   gCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAgcatggcatg                                                                         >  1:184385/1‑93 (MQ=255)

                    cAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGCAAAGcatggcatgg                                                                        <  2:5185639/93‑1 (MQ=255)

                      gagaACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGAc                                                                      <  1:4261437/93‑1 (MQ=255)

                       agaACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACt                                                                     <  1:3334158/93‑1 (MQ=255)

                       agaACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACt                                                                     >  2:5504674/1‑93 (MQ=255)

                       agaACTATGACGCAGTTATCGACGCTCAGGGGCTGGAAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACt                                                                     >  1:6331010/1‑93 (MQ=255)

                        gaACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTg                                                                    >  2:251624/1‑93 (MQ=255)

                          aCTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGc                                                                  <  2:4955127/93‑1 (MQ=255)

                           cTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCa                                                                 >  1:6244392/1‑93 (MQ=255)

                            tATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCaa                                                                >  2:4618317/1‑93 (MQ=255)

                            tATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCaa                                                                >  1:7237633/1‑93 (MQ=255)

                            tATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCaa                                                                >  2:3423553/1‑93 (MQ=255)

                              tGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAAc                                                              >  1:2695361/1‑93 (MQ=255)

                               gACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAAcc                                                             >  1:2629908/1‑93 (MQ=255)

                               gACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAAcc                                                             >  2:7349229/1‑93 (MQ=255)

                                 cGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGc                                                           <  1:7413394/93‑1 (MQ=255)

                                 cGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGc                                                           <  2:4360797/93‑1 (MQ=255)

                                  gCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCt                                                          <  2:3678622/93‑1 (MQ=255)

                                  gCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCt                                                          <  2:3903630/93‑1 (MQ=255)

                                   cAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTc                                                         <  1:4760603/93‑1 (MQ=255)

                                    aGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTcg                                                        >  1:3547351/1‑93 (MQ=255)

                                     gTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTcgc                                                       >  2:1479560/1‑93 (MQ=255)

                                      ttATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTcgcg                                                      >  1:6110483/1‑93 (MQ=255)

                                       tATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGa                                                     >  2:4885777/1‑93 (MQ=255)

                                        aTCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGaa                                                    <  2:6626346/93‑1 (MQ=255)

                                          cGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAAcc                                                  <  2:5235076/93‑1 (MQ=255)

                                           gACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCt                                                 <  2:3364301/93‑1 (MQ=255)

                                             gcttCAGGGGCTGGAAAAAACCCCGGCCCGGTTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCttt                                               <  1:1209693/90‑1 (MQ=255)

                                               cTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTag                                             <  2:6438487/93‑1 (MQ=255)

                                                tCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTagc                                            >  1:5360987/1‑93 (MQ=255)

                                                  aGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTagcca                                          >  1:2722462/1‑93 (MQ=255)

                                                   ggggCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTagccag                                         >  2:3594507/1‑93 (MQ=255)

                                                     ggCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTagccagcc                                       <  1:6686649/93‑1 (MQ=255)

                                                      gCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCt                                      >  2:139352/1‑93 (MQ=255)

                                                       cTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTg                                     >  2:3049618/1‑93 (MQ=255)

                                                        tGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGt                                    >  1:5095/1‑93 (MQ=255)

                                                         ggTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGtt                                   >  1:6061201/1‑93 (MQ=255)

                                                          gTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGttt                                  <  1:98332/93‑1 (MQ=255)

                                                           tAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGtttt                                 >  2:4849745/1‑93 (MQ=255)

                                                            aaaaaGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTa                                <  2:599414/93‑1 (MQ=255)

                                                             aaaaGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTAc                               <  1:719219/93‑1 (MQ=255)

                                                              aaaGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACa                              >  2:6681323/1‑93 (MQ=255)

                                                              aaaGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACa                              >  1:484716/1‑93 (MQ=255)

                                                              aaaGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACa                              >  1:1240526/1‑93 (MQ=255)

                                                                aGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAAt                            <  2:7051674/93‑1 (MQ=255)

                                                                aGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAAt                            >  1:1894768/1‑93 (MQ=255)

                                                                aGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAAt                            >  1:3424756/1‑93 (MQ=255)

                                                                 gcgcGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATc                           <  1:41459/93‑1 (MQ=255)

                                                                   gcggcgCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGt                         <  1:880036/93‑1 (MQ=255)

                                                                    cggcgCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTa                        >  1:2020177/1‑93 (MQ=255)

                                                                    cggcgCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTa                        >  2:3803416/1‑93 (MQ=255)

                                                                     ggcgCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTaa                       <  1:588399/93‑1 (MQ=255)

                                                                      gcgcTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAg                      >  1:3226941/1‑93 (MQ=255)

                                                                      gcgcTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAg                      <  1:1030292/93‑1 (MQ=255)

                                                                       cgcTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGc                     <  2:2079680/93‑1 (MQ=255)

                                                                         cTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGcat                   >  1:6503252/1‑93 (MQ=255)

                                                                           ggTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGcatca                 <  2:7529448/93‑1 (MQ=255)

                                                                           ggTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGcatca                 <  1:3900240/93‑1 (MQ=255)

                                                                           ggTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGcatca                 <  1:5234471/93‑1 (MQ=255)

                                                                           ggTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGcatca                 >  1:854874/1‑93 (MQ=255)

                                                                            gTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGcatcat                <  2:3215783/93‑1 (MQ=255)

                                                                              gACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCatat              <  2:1582601/93‑1 (MQ=255)

                                                                              gACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCatat              >  1:3042210/1‑93 (MQ=255)

                                                                               aCGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATAtt             >  2:1227735/1‑93 (MQ=255)

                                                                               aCGCGTCTGGCACATGGCGTAAAGCATGGCATGGGCTGGCAAACCCCTCGCGAACCTTTAGCCAGCCCGTTTTACAATCGTAAACATCATAtt             >  1:3665594/1‑93 (MQ=255)

                                                                               aCGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATAtt             <  1:812422/93‑1 (MQ=255)

                                                                               aCGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATAtt             <  2:2758092/93‑1 (MQ=255)

                                                                               aCGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATAtt             <  2:4088396/93‑1 (MQ=255)

                                                                                cgcgTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTg            >  1:2328045/1‑93 (MQ=255)

                                                                                  cgTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCa          <  2:1663817/93‑1 (MQ=255)

                                                                                  cgTCTGGCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCa          <  1:494285/93‑1 (MQ=255)

                                                                                       ggCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAAca     >  2:6297146/1‑93 (MQ=255)

                                                                                       ggCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAAca     <  2:5607927/93‑1 (MQ=255)

                                                                                       ggCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAAca     >  2:7194618/1‑93 (MQ=255)

                                                                                       ggCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAAca     <  1:1648195/93‑1 (MQ=255)

                                                                                       ggCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAAca     <  1:1148558/93‑1 (MQ=255)

                                                                                       ggCACATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAAca     >  1:1056773/1‑93 (MQ=255)

GTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCA  >  NC_000913/3793836‑3794018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCAG  >  NC_000913/3793835‑3794019

CGTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCA                                                                                              >  SRR4302542.3304639/1‑94 (MQ=60)

CGTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACA                                                                                              >  SRR4302542.6468027/1‑94 (MQ=60)

 GTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACAT                                                                                             >  SRR4302542.6897214/1‑94 (MQ=60)

 GTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACAT                                                                                             >  SRR4302542.1740329/1‑94 (MQ=60)

 GTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACAT                                                                                             <  SRR4302542.5374064/94‑1 (MQ=60)

 GTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACAT                                                                                             >  SRR4302542.5649495/1‑94 (MQ=60)

   TTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGTGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGG                                                                                           <  SRR4302542.7020205/94‑1 (MQ=60)

    TCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGC                                                                                          <  SRR4302542.3125991/94‑1 (MQ=60)

     CGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCG                                                                                         <  SRR4302542.1383485/94‑1 (MQ=60)

     CGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCG                                                                                         <  SRR4302542.3102092/94‑1 (MQ=60)

     CGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCG                                                                                         <  SRR4302542.3389351/94‑1 (MQ=60)

      GTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGT                                                                                        <  SRR4302542.1889598/94‑1 (MQ=60)

       TGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTA                                                                                       >  SRR4302542.6689351/1‑94 (MQ=60)

         AAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAA                                                                                     >  SRR4302542.635678/1‑94 (MQ=60)

         AAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAA                                                                                     >  SRR4302542.287410/1‑94 (MQ=60)

         AAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAA                                                                                     <  SRR4302542.5585810/94‑1 (MQ=60)

         AAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAA                                                                                     >  SRR4302542.6407274/1‑94 (MQ=60)

          AGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAG                                                                                    >  SRR4302542.5680812/1‑94 (MQ=60)

          AGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAG                                                                                    <  SRR4302542.5045350/94‑1 (MQ=60)

          AGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAG                                                                                    <  SRR4302542.1871312/94‑1 (MQ=60)

            CGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCA                                                                                  >  SRR4302542.4449036/1‑94 (MQ=60)

              CTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATG                                                                                <  SRR4302542.3625963/94‑1 (MQ=60)

              CTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATG                                                                                >  SRR4302542.5735423/1‑94 (MQ=60)

              CTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATG                                                                                >  SRR4302542.4052285/1‑94 (MQ=60)

               TACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGG                                                                               >  SRR4302542.4343883/1‑94 (MQ=60)

               TACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGG                                                                               <  SRR4302542.4202637/94‑1 (MQ=60)

               TACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGG                                                                               <  SRR4302542.1049071/94‑1 (MQ=60)

               TACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGG                                                                               <  SRR4302542.1995201/94‑1 (MQ=60)

               TACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGG                                                                               <  SRR4302542.1260713/94‑1 (MQ=60)

                ACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGC                                                                              >  SRR4302542.506536/1‑94 (MQ=60)

                ACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGC                                                                              >  SRR4302542.1467604/1‑94 (MQ=60)

                ACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGC                                                                              <  SRR4302542.316644/94‑1 (MQ=60)

                  AAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCAT                                                                            >  SRR4302542.2712596/1‑94 (MQ=60)

                   AGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATG                                                                           >  SRR4302542.2137882/1‑94 (MQ=60)

                   AGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATG                                                                           >  SRR4302542.185949/1‑94 (MQ=60)

                   AGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATG                                                                           <  SRR4302542.4191046/94‑1 (MQ=60)

                      AGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGAC                                                                        >  SRR4302542.163840/1‑94 (MQ=60)

                      AGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGAC                                                                        >  SRR4302542.5526334/1‑94 (MQ=60)

                      AGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGAC                                                                        >  SRR4302542.6203192/1‑94 (MQ=60)

                      AGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGAC                                                                        >  SRR4302542.1158976/1‑94 (MQ=60)

                       GAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACT                                                                       <  SRR4302542.4987218/94‑1 (MQ=60)

                       GAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACT                                                                       >  SRR4302542.2914483/1‑94 (MQ=60)

                       GAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACT                                                                       <  SRR4302542.4303395/94‑1 (MQ=60)

                       GAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGAAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACT                                                                       >  SRR4302542.6393391/1‑94 (MQ=60)

                        AGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTG                                                                      >  SRR4302542.5562626/1‑94 (MQ=60)

                        AGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTG                                                                      <  SRR4302542.3365529/94‑1 (MQ=60)

                         GAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG                                                                     <  SRR4302542.1752339/94‑1 (MQ=60)

                          AACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑C                                                                   >  SRR4302542.2692293/1‑94 (MQ=60)

                          AACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑C                                                                   >  SRR4302542.4146256/1‑94 (MQ=60)

                          AACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑C                                                                   >  SRR4302542.37231/1‑94 (MQ=60)

                           ACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CA                                                                  >  SRR4302542.1074453/1‑94 (MQ=60)

                           ACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CA                                                                  >  SRR4302542.6305916/1‑94 (MQ=60)

                            CTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAA                                                                 >  SRR4302542.2728393/1‑94 (MQ=60)

                            CTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAA                                                                 >  SRR4302542.7308622/1‑94 (MQ=60)

                            CTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAA                                                                 >  SRR4302542.6628027/1‑94 (MQ=60)

                              ATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAAC                                                               >  SRR4302542.2721350/1‑94 (MQ=60)

                               TGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACC                                                              >  SRR4302542.2655316/1‑94 (MQ=60)

                               TGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACC                                                              <  SRR4302542.454981/94‑1 (MQ=60)

                                GACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCG                                                             <  SRR4302542.5666597/94‑1 (MQ=60)

                                GACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCG                                                             >  SRR4302542.4885537/1‑94 (MQ=60)

                                  CGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCT                                                           <  SRR4302542.4221426/94‑1 (MQ=60)

                                  CGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCT                                                           <  SRR4302542.7485942/94‑1 (MQ=60)

                                  CGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCT                                                           >  SRR4302542.5146979/1‑94 (MQ=60)

                                  CGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCT                                                           >  SRR4302542.6572969/1‑94 (MQ=60)

                                  CGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCT                                                           >  SRR4302542.3541178/1‑94 (MQ=60)

                                  CGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCT                                                           >  SRR4302542.5406828/1‑94 (MQ=60)

                                   GCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTC                                                          >  SRR4302542.66626/1‑94 (MQ=60)

                                   GCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTC                                                          <  SRR4302542.2945380/94‑1 (MQ=60)

                                   GCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTC                                                          >  SRR4302542.6117692/1‑94 (MQ=60)

                                    CAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCG                                                         <  SRR4302542.4807025/94‑1 (MQ=60)

                                    CAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCG                                                         >  SRR4302542.3580518/1‑94 (MQ=60)

                                      GTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCG                                                       >  SRR4302542.6169617/1‑94 (MQ=60)

                                      GTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCG                                                       >  SRR4302542.6521408/1‑94 (MQ=60)

                                        TATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAA                                                     >  SRR4302542.6121815/1‑94 (MQ=60)

                                         ATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAAC                                                    <  SRR4302542.1076915/94‑1 (MQ=60)

                                         ATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAAC                                                    >  SRR4302542.7434972/1‑94 (MQ=60)

                                         ATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAAC                                                    <  SRR4302542.3270142/94‑1 (MQ=60)

                                          TCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACC                                                   >  SRR4302542.5803743/1‑94 (MQ=60)

                                           CGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCT                                                  <  SRR4302542.1226770/94‑1 (MQ=60)

                                             ACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTT                                                >  SRR4302542.6977695/1‑94 (MQ=60)

                                              gcttcaggggctggaaaaaaccccggcccggtTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTA                                               <  SRR4302542.1220084/62‑1 (MQ=60)

                                              CGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTA                                               >  SRR4302542.7322267/1‑94 (MQ=60)

                                              CGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTA                                               <  SRR4302542.5833013/94‑1 (MQ=60)

                                               GCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCCAAACCGCTCGCGAACCTTTA                                               <  SRR4302542.6224497/94‑1 (MQ=60)

                                               GCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAG                                              <  SRR4302542.1164083/94‑1 (MQ=60)

                                                CTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGC                                             >  SRR4302542.3884863/1‑94 (MQ=60)

                                                CTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGC                                             >  SRR4302542.5413091/1‑94 (MQ=60)

                                                CTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGC                                             >  SRR4302542.319419/1‑94 (MQ=60)

                                                  CAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCA                                           >  SRR4302542.272347/1‑94 (MQ=60)

                                                  CAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCA                                           >  SRR4302542.2748711/1‑94 (MQ=60)

                                                   AGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAG                                          >  SRR4302542.4481027/1‑94 (MQ=60)

                                                   AGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAG                                          <  SRR4302542.6719586/94‑1 (MQ=60)

                                                    GGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGC                                         >  SRR4302542.98781/1‑94 (MQ=60)

                                                    GGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGC                                         >  SRR4302542.213986/1‑94 (MQ=60)

                                                    GGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGC                                         <  SRR4302542.4913724/94‑1 (MQ=60)

                                                     GGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCC                                        <  SRR4302542.2818398/94‑1 (MQ=60)

                                                      GGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCT                                       <  SRR4302542.6752510/94‑1 (MQ=60)

                                                       GCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTG                                      >  SRR4302542.7115068/1‑94 (MQ=60)

                                                        CTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGT                                     >  SRR4302542.5134/1‑94 (MQ=60)

                                                         TGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGT‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTT                                    <  SRR4302542.3610646/94‑1 (MQ=60)

                                                         TGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTT                                    <  SRR4302542.4403849/94‑1 (MQ=60)

                                                         TGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTT                                    >  SRR4302542.6119870/1‑94 (MQ=60)

                                                         TGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTT                                    >  SRR4302542.3125934/1‑94 (MQ=60)

                                                           GTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTT                                  <  SRR4302542.99162/94‑1 (MQ=60)

                                                           GTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTT                                  >  SRR4302542.2848913/1‑94 (MQ=60)

                                                            TAAAAAGCGCGGCGCTGGTGACGCGTCAGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTA                                 >  SRR4302542.6736270/1‑94 (MQ=60)

                                                              AAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACA                               >  SRR4302542.5957917/1‑94 (MQ=60)

                                                              AAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACA                               >  SRR4302542.488918/1‑94 (MQ=60)

                                                              AAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACA                               <  SRR4302542.725418/94‑1 (MQ=60)

                                                              AAAAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACA                               >  SRR4302542.1251184/1‑94 (MQ=60)

                                                                AAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAAT                             >  SRR4302542.3456834/1‑94 (MQ=60)

                                                                AAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAAT                             <  SRR4302542.4153691/94‑1 (MQ=60)

                                                                AAGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAAT                             >  SRR4302542.1911165/1‑94 (MQ=60)

                                                                 AGCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATC                            >  SRR4302542.3075516/1‑94 (MQ=60)

                                                                  GCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCG                           <  SRR4302542.41822/94‑1 (MQ=60)

                                                                  GCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCG                           <  SRR4302542.1916792/94‑1 (MQ=60)

                                                                  GCGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCG                           <  SRR4302542.6529718/94‑1 (MQ=60)

                                                                   CGCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGT                          >  SRR4302542.7399278/1‑94 (MQ=60)

                                                                    GCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTA                         <  SRR4302542.1580574/94‑1 (MQ=60)

                                                                    GCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTA                         >  SRR4302542.2037650/1‑94 (MQ=60)

                                                                    GCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CACACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTA                         <  SRR4302542.7581928/94‑1 (MQ=60)

                                                                    GCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTA                         <  SRR4302542.5343604/94‑1 (MQ=60)

                                                                    GCGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTA                         <  SRR4302542.887638/94‑1 (MQ=60)

                                                                     CGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAA                        <  SRR4302542.2451748/94‑1 (MQ=60)

                                                                     CGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAA                        <  SRR4302542.3367516/94‑1 (MQ=60)

                                                                     CGGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAA                        <  SRR4302542.6154394/94‑1 (MQ=60)

                                                                      GGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAG                       <  SRR4302542.593472/94‑1 (MQ=60)

                                                                      GGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAG                       >  SRR4302542.3257473/1‑94 (MQ=60)

                                                                      GGCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAG                       <  SRR4302542.919964/94‑1 (MQ=60)

                                                                       GCGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGC                      <  SRR4302542.1039164/94‑1 (MQ=60)

                                                                        CGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCA                     <  SRR4302542.4232802/94‑1 (MQ=60)

                                                                        CGCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCA                     >  SRR4302542.1049832/1‑94 (MQ=60)

                                                                         GCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCAT                    >  SRR4302542.6567358/1‑94 (MQ=60)

                                                                         GCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCAT                    >  SRR4302542.2139123/1‑94 (MQ=60)

                                                                         GCTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCAT                    >  SRR4302542.864387/1‑94 (MQ=60)

                                                                          CTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATC                   >  SRR4302542.845482/1‑94 (MQ=60)

                                                                          CTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATC                   >  SRR4302542.6462257/1‑94 (MQ=60)

                                                                          CTGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATC                   >  SRR4302542.4819191/1‑94 (MQ=60)

                                                                           TGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCA                  >  SRR4302542.2571385/1‑94 (MQ=60)

                                                                           TGGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCA                  >  SRR4302542.862241/1‑94 (MQ=60)

                                                                            GGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCAT                 <  SRR4302542.3938739/94‑1 (MQ=60)

                                                                            GGTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCAT                 <  SRR4302542.5285366/94‑1 (MQ=60)

                                                                             GTGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATA                <  SRR4302542.7278397/94‑1 (MQ=60)

                                                                              TGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATAT               >  SRR4302542.3071257/1‑94 (MQ=60)

                                                                              TGACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATAT               <  SRR4302542.2627175/94‑1 (MQ=60)

                                                                               GACGCGTCTGGCACATGGCGTAAAGCATGGCATGGGCTGG‑CAAACCCCTCGCGAACCTTTAGCCAGCCCGTTTTACAATCGTAAACATCATATT              >  SRR4302542.3700461/1‑94 (MQ=60)

                                                                               GACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATT              <  SRR4302542.1351379/94‑1 (MQ=60)

                                                                               GACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATT              >  SRR4302542.780174/1‑94 (MQ=60)

                                                                                ACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTG             <  SRR4302542.819453/94‑1 (MQ=60)

                                                                                ACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTG             >  SRR4302542.2088698/1‑94 (MQ=60)

                                                                                ACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTG             <  SRR4302542.87639/94‑1 (MQ=60)

                                                                                ACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTG             >  SRR4302542.2347998/1‑94 (MQ=60)

                                                                                ACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTG             <  SRR4302542.2130420/94‑1 (MQ=60)

                                                                                ACGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTG             <  SRR4302542.3944979/94‑1 (MQ=60)

                                                                                 CGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGC            <  SRR4302542.3990395/94‑1 (MQ=60)

                                                                                 CGCGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGC            >  SRR4302542.857559/1‑94 (MQ=60)

                                                                                   CGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAA          <  SRR4302542.5954841/94‑1 (MQ=60)

                                                                                   CGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAA          >  SRR4302542.5714384/1‑94 (MQ=60)

                                                                                   CGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAA          <  SRR4302542.3872069/94‑1 (MQ=60)

                                                                                   CGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAA          >  SRR4302542.1248451/1‑94 (MQ=60)

                                                                                   CGTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAA          <  SRR4302542.498543/94‑1 (MQ=60)

                                                                                    GTCTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAA         >  SRR4302542.5714255/1‑94 (MQ=60)

                                                                                      CTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAAC       <  SRR4302542.3479647/94‑1 (MQ=60)

                                                                                      CTGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAAC       >  SRR4302542.4202345/1‑94 (MQ=60)

                                                                                       TGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACA      <  SRR4302542.7206456/94‑1 (MQ=60)

                                                                                       TGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACA      <  SRR4302542.6384260/94‑1 (MQ=60)

                                                                                       TGGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACA      >  SRR4302542.1065854/1‑94 (MQ=60)

                                                                                        GGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAG     <  SRR4302542.4328701/94‑1 (MQ=60)

                                                                                        GGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAG     <  SRR4302542.1158395/94‑1 (MQ=60)

                                                                                        GGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAG     >  SRR4302542.4924305/1‑94 (MQ=60)

                                                                                        GGCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAG     <  SRR4302542.1662443/94‑1 (MQ=60)

                                                                                         GCACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGC    <  SRR4302542.2437527/94‑1 (MQ=60)

                                                                                          CGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCA   >  SRR4302542.5236790/1‑94 (MQ=60)

                                                                                          CGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCA   >  SRR4302542.7299448/1‑94 (MQ=60)

                                                                                          CACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCA   >  SRR4302542.2286236/1‑94 (MQ=60)

                                                                                          CACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCA   >  SRR4302542.2508360/1‑94 (MQ=60)

                                                                                          CACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCA   >  SRR4302542.7322440/1‑94 (MQ=60)

                                                                                           ACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCAG  >  SRR4302542.5291709/1‑94 (MQ=60)

                                                                                           ACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCAG  <  SRR4302542.3295197/94‑1 (MQ=60)

                                                                                           ACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCAG  <  SRR4302542.2431241/94‑1 (MQ=60)

                                                                                           ACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCAG  <  SRR4302542.1124849/94‑1 (MQ=60)

                                                                                           ACATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCAG  >  SRR4302542.7185166/1‑94 (MQ=60)

CGTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGG‑CAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCAG  >  NC_000913/3793835‑3794019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`