Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,809,063 A→G intergenic (‑19/+2) rpmG ← / ← rpmB 50S ribosomal subunit protein L33/50S ribosomal subunit protein L28

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,809,0630AG78.0% 553.2 / 178.5 300intergenic (‑19/+2)rpmG/rpmB50S ribosomal subunit protein L33/50S ribosomal subunit protein L28
Reads supporting (aligned to +/- strand):  ref base A (32/34);  new base G (109/125);  total (141/159)
Fisher's exact test for biased strand distribution p-value = 8.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01

Only 100 of 323 total aligned reads displayed.

TCGTAGTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATACGCGC  >  NC_000913/3808972‑3809155
                                                                                           |                                                                                            
tcGTAGTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAagtac                                                                                             <  1:5496316/93‑1 (MQ=255)
  gTAGTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAagtgctt                                                                                           <  2:4157103/93‑1 (MQ=255)
    aGTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAagtgcttag                                                                                         <  2:1571458/93‑1 (MQ=255)
    aGTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAagtgcttag                                                                                         <  1:7279507/93‑1 (MQ=255)
     gTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAagtgcttagt                                                                                        <  1:2330012/93‑1 (MQ=255)
     gTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAagtgcttagt                                                                                        >  2:6665451/1‑93 (MQ=255)
      tGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAagtgcttagta                                                                                       <  2:1989202/93‑1 (MQ=255)
         tataGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAagtgcttagtactt                                                                                    >  2:1539283/1‑93 (MQ=255)
          ataGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACttt                                                                                   >  1:3873298/1‑93 (MQ=255)
           taGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACtttt                                                                                  >  1:1534849/1‑93 (MQ=255)
           taGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACtttt                                                                                  >  1:6683079/1‑93 (MQ=255)
            aGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTc                                                                                 <  1:842722/93‑1 (MQ=255)
            aGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTc                                                                                 >  1:6896407/1‑93 (MQ=255)
             gAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCg                                                                                >  1:4541613/1‑93 (MQ=255)
             gAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCg                                                                                >  2:6097977/1‑93 (MQ=255)
              aaGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGc                                                                               >  1:47476/1‑93 (MQ=255)
                 tGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCAc                                                                            >  1:3488705/1‑93 (MQ=255)
                 tGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCAc                                                                            <  2:7152972/93‑1 (MQ=255)
                 tGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCAc                                                                            >  2:439619/1‑93 (MQ=255)
                   aCCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACgg                                                                          <  2:5997593/93‑1 (MQ=255)
                     cAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGc                                                                        >  1:3809083/1‑93 (MQ=255)
                     cAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGc                                                                        >  1:590585/1‑93 (MQ=255)
                      aGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCa                                                                       <  2:2823209/93‑1 (MQ=255)
                       gTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCAc                                                                      >  1:7193384/1‑93 (MQ=255)
                         aCCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGc                                                                    <  2:528063/93‑1 (MQ=255)
                          ccAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCa                                                                   >  2:6452726/1‑93 (MQ=255)
                           cagcagAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACCCAg                                                                  <  1:6976910/93‑1 (MQ=255)
                             gcagAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGtt                                                                >  2:5835260/1‑93 (MQ=255)
                               agaagaAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCa                                                              <  2:2423895/93‑1 (MQ=255)
                               agaagaAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCa                                                              >  2:7462773/1‑93 (MQ=255)
                                gaagaaACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAg                                                             >  2:837203/1‑93 (MQ=255)
                                   gaaACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCa                                                          <  1:2287833/93‑1 (MQ=255)
                                      aCCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGaa                                                       >  1:6324975/1‑93 (MQ=255)
                                      aCCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGaa                                                       >  1:3608010/1‑93 (MQ=255)
                                       ccAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAAc                                                      <  1:6051986/93‑1 (MQ=255)
                                       ccAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAAc                                                      <  2:5456022/93‑1 (MQ=255)
                                           cTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTa                                                  <  2:2507251/93‑1 (MQ=255)
                                             tGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATc                                                <  2:1843389/93‑1 (MQ=255)
                                                 tttCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATg                                            <  1:1365965/93‑1 (MQ=255)
                                                 tttCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATg                                            <  1:6531250/93‑1 (MQ=255)
                                                  ttCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGc                                           >  2:3846550/1‑93 (MQ=255)
                                                    ctcACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCt                                         >  1:3915216/1‑93 (MQ=255)
                                                    ctcACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCt                                         <  1:4623358/93‑1 (MQ=255)
                                                     tcACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCtt                                        <  1:4100428/93‑1 (MQ=255)
                                                     tcACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCtt                                        >  2:2125578/1‑93 (MQ=255)
                                                      cACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCttt                                       <  2:6229083/93‑1 (MQ=255)
                                                       aCGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCtttt                                      >  2:3278866/1‑93 (MQ=255)
                                                       aCGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCtttt                                      <  1:5797968/93‑1 (MQ=255)
                                                       aCGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCtttt                                      >  1:1652606/1‑93 (MQ=255)
                                                        cGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCttttt                                     >  1:1432879/1‑93 (MQ=255)
                                                        cGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTATTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCttttt                                     >  2:2884890/1‑93 (MQ=255)
                                                         gAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCtttttt                                    <  1:3146107/93‑1 (MQ=255)
                                                          aaTACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTa                                   <  2:4930365/93‑1 (MQ=255)
                                                          aaTACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTa                                   <  1:216225/93‑1 (MQ=255)
                                                          aaTACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTa                                   <  2:3680587/93‑1 (MQ=255)
                                                          aaTACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTa                                   >  2:1170399/1‑93 (MQ=255)
                                                          aaTACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTa                                   >  1:1208832/1‑93 (MQ=255)
                                                          aaTACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTa                                   >  1:5399737/1‑93 (MQ=255)
                                                           aTACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTAt                                  >  2:5728613/1‑93 (MQ=255)
                                                            tACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATc                                 >  2:4433549/1‑93 (MQ=255)
                                                            tACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATc                                 >  2:5620877/1‑93 (MQ=255)
                                                            tACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATc                                 >  1:611393/1‑93 (MQ=255)
                                                            tACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATc                                 <  2:3766616/93‑1 (MQ=255)
                                                             aCCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCg                                <  1:6586524/93‑1 (MQ=255)
                                                             aCCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCg                                <  2:3391025/93‑1 (MQ=255)
                                                              ccTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGa                               <  1:6761705/93‑1 (MQ=255)
                                                              ccTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGa                               >  1:7462245/1‑93 (MQ=255)
                                                               cTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGAt                              <  1:5178497/93‑1 (MQ=255)
                                                               cTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGAt                              >  2:6496374/1‑93 (MQ=255)
                                                                 ttAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTa                            >  2:7008523/1‑93 (MQ=255)
                                                                 ttAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTa                            >  2:205097/1‑93 (MQ=255)
                                                                 ttAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTa                            <  2:7192300/93‑1 (MQ=255)
                                                                  tAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGAt                                             <  1:5009463/75‑1 (MQ=255)
                                                                  tAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGAt                                             >  2:5009463/1‑75 (MQ=255)
                                                                  tAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTac                           <  1:2878200/93‑1 (MQ=255)
                                                                    gCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTacac                         >  1:5690211/1‑93 (MQ=255)
                                                                    gCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTacac                         <  1:4304647/93‑1 (MQ=255)
                                                                    gCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTacac                         >  2:536187/1‑93 (MQ=255)
                                                                       aTGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCa                      <  2:1225838/93‑1 (MQ=255)
                                                                       aTGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCa                      <  2:2897550/93‑1 (MQ=255)
                                                                       aTGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCa                      >  1:4482946/1‑93 (MQ=255)
                                                                        tGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCAt                     >  2:4727389/1‑93 (MQ=255)
                                                                         gATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATa                    <  2:3101285/93‑1 (MQ=255)
                                                                          atttatttCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATAc                   >  1:1929606/1‑93 (MQ=255)
                                                                           tttatttCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATAcc                  >  1:3692559/1‑93 (MQ=255)
                                                                           tttatttCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATAcc                  >  2:1738016/1‑93 (MQ=255)
                                                                             tatttCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCtt                >  1:6460584/1‑93 (MQ=255)
                                                                             tatttCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCtt                >  2:6861246/1‑93 (MQ=255)
                                                                              atttCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTTTCGTTTACACGAATACtttt               >  1:2527687/1‑93 (MQ=255)
                                                                              atttCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCttt               >  2:2974012/1‑93 (MQ=255)
                                                                               tttCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTa              <  2:3901257/93‑1 (MQ=255)
                                                                                ttCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAg             >  1:2973113/1‑93 (MQ=255)
                                                                                ttCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAg             >  1:1039088/1‑93 (MQ=255)
                                                                                   ctctAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAg          >  1:3309143/1‑93 (MQ=255)
                                                                                    tctAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGa         >  2:1389738/1‑93 (MQ=255)
                                                                                     ctAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGAt        >  1:778988/1‑93 (MQ=255)
                                                                                     ctAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGAt        <  2:3201532/93‑1 (MQ=255)
                                                                                      tAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATa       <  2:6728079/93‑1 (MQ=255)
                                                                                      tAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATa       <  2:2724753/93‑1 (MQ=255)
                                                                                           acttagtacttTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATACgcgc  >  1:5841513/1‑93 (MQ=255)
                                                                                           |                                                                                            
TCGTAGTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATACGCGC  >  NC_000913/3808972‑3809155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CTTCGTAGTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATACGCGCA  >  NC_000913/3808970‑3809156
                                                                                             |                                                                                             
CTTCGTAGTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTG                                                                                               <  SRR4302542.3869201/94‑1 (MQ=60)
CTTCGTAGTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTG                                                                                               <  SRR4302542.6957934/94‑1 (MQ=60)
  TCGTAGTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCT                                                                                             <  SRR4302542.5834832/94‑1 (MQ=60)
  TCGTAGTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACT                                                                                             <  SRR4302542.5549701/94‑1 (MQ=60)
      AGTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGT                                                                                         <  SRR4302542.7350901/94‑1 (MQ=60)
       GTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTA                                                                                        <  SRR4302542.2349978/94‑1 (MQ=60)
       GTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTA                                                                                        >  SRR4302542.1843220/1‑94 (MQ=60)
       GTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTA                                                                                        <  SRR4302542.6270316/94‑1 (MQ=60)
        TGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTAC                                                                                       <  SRR4302542.5078607/94‑1 (MQ=60)
          GTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTT                                                                                     >  SRR4302542.2278765/1‑94 (MQ=60)
          GTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTT                                                                                     <  SRR4302542.773522/94‑1 (MQ=60)
          GTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTT                                                                                     >  SRR4302542.4126820/1‑94 (MQ=60)
           TATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTT                                                                                    >  SRR4302542.3911559/1‑94 (MQ=60)
           TATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTT                                                                                    <  SRR4302542.5753814/94‑1 (MQ=60)
            ATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTT                                                                                   >  SRR4302542.1548105/1‑94 (MQ=60)
            ATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTT                                                                                   <  SRR4302542.958478/94‑1 (MQ=60)
            ATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTT                                                                                   >  SRR4302542.6748906/1‑94 (MQ=60)
             TAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTC                                                                                  >  SRR4302542.6964126/1‑94 (MQ=60)
              AGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCG                                                                                 >  SRR4302542.4586073/1‑94 (MQ=60)
              AGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCG                                                                                 <  SRR4302542.849997/94‑1 (MQ=60)
               GAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGC                                                                                >  SRR4302542.47870/1‑94 (MQ=60)
                AAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCC                                                                               <  SRR4302542.5857570/94‑1 (MQ=60)
                  GTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCAC                                                                             <  SRR4302542.1131814/94‑1 (MQ=60)
                  GTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCAC                                                                             >  SRR4302542.3521332/1‑94 (MQ=60)
                   TGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACG                                                                            <  SRR4302542.802708/94‑1 (MQ=60)
                     ACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTagaggaaataa                                                                          <  SRR4302542.1698460/94‑12 (MQ=60)
                     ACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGG                                                                          <  SRR4302542.3674003/94‑1 (MQ=60)
                      CCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGC                                                                         >  SRR4302542.3846770/1‑94 (MQ=60)
                      CCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGC                                                                         >  SRR4302542.595675/1‑94 (MQ=60)
                       CAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCA                                                                        <  SRR4302542.1186142/94‑1 (MQ=60)
                        AGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCAC                                                                       >  SRR4302542.4981764/1‑94 (MQ=60)
                        AGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCAC                                                                       <  SRR4302542.801940/94‑1 (MQ=60)
                        AGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCAC                                                                       >  SRR4302542.7263975/1‑94 (MQ=60)
                         GTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACG                                                                      <  SRR4302542.6501230/94‑1 (MQ=60)
                           ACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCA                                                                    >  SRR4302542.4409493/1‑94 (MQ=60)
                           ACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCA                                                                    >  SRR4302542.5638733/1‑94 (MQ=60)
                            CCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAG                                                                   >  SRR4302542.2925085/1‑94 (MQ=60)
                             CAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGT                                                                  <  SRR4302542.6167229/94‑1 (MQ=60)
                             CAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACCCAGT                                                                  <  SRR4302542.7045436/94‑1 (MQ=60)
                              AGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTT                                                                 <  SRR4302542.60079/94‑1 (MQ=60)
                              AGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTT                                                                 <  SRR4302542.2736559/94‑1 (MQ=60)
                                CAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCA                                                               <  SRR4302542.2349592/94‑1 (MQ=60)
                                CAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCA                                                               >  SRR4302542.4642543/1‑94 (MQ=60)
                                CAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCA                                                               >  SRR4302542.7563590/1‑94 (MQ=60)
                                 AGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAG                                                              <  SRR4302542.3885511/94‑1 (MQ=60)
                                    AGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCA                                                           <  SRR4302542.6691113/94‑1 (MQ=60)
                                    AGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCA                                                           <  SRR4302542.1559941/94‑1 (MQ=60)
                                     GAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAG                                                          <  SRR4302542.2307490/94‑1 (MQ=60)
                                      AAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGA                                                         >  SRR4302542.6127353/1‑94 (MQ=60)
                                      AAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGA                                                         >  SRR4302542.6859087/1‑94 (MQ=60)
                                      AAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGA                                                         >  SRR4302542.3535293/1‑94 (MQ=60)
                                       AACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAA                                                        >  SRR4302542.6387302/1‑94 (MQ=60)
                                       AACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAA                                                        >  SRR4302542.3641629/1‑94 (MQ=60)
                                        ACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAAC                                                       >  SRR4302542.3836609/1‑94 (MQ=60)
                                        ACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAAC                                                       <  SRR4302542.1650026/94‑1 (MQ=60)
                                         CCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACT                                                      <  SRR4302542.6110558/94‑1 (MQ=60)
                                         CCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACT                                                      <  SRR4302542.204950/94‑1 (MQ=60)
                                         CCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACT                                                      <  SRR4302542.7301145/94‑1 (MQ=60)
                                         CCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACT                                                      <  SRR4302542.3747169/94‑1 (MQ=60)
                                          CAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTG                                                     >  SRR4302542.5602158/1‑94 (MQ=60)
                                           AGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGT                                                    >  SRR4302542.6759129/1‑94 (MQ=60)
                                           AGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGT                                                    <  SRR4302542.1474601/94‑1 (MQ=60)
                                            GCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTA                                                   >  SRR4302542.3746522/1‑94 (MQ=60)
                                            GCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTA                                                   >  SRR4302542.7460005/1‑94 (MQ=60)
                                            GCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTA                                                   >  SRR4302542.2985798/1‑94 (MQ=60)
                                            GCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTA                                                   >  SRR4302542.3988695/1‑94 (MQ=60)
                                            GCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTA                                                   <  SRR4302542.5475948/94‑1 (MQ=60)
                                            GCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTA                                                   <  SRR4302542.4576969/94‑1 (MQ=60)
                                             CTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTAT                                                  <  SRR4302542.1737172/94‑1 (MQ=60)
                                             CTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTAT                                                  <  SRR4302542.3664959/94‑1 (MQ=60)
                                             CTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTAT                                                  >  SRR4302542.6528079/1‑94 (MQ=60)
                                              TTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATC                                                 >  SRR4302542.4434085/1‑94 (MQ=60)
                                              TTGATTTTCTCACGAATACATTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTGTCGCCACGGGCAAGCAGTCCAGCCAGGACTGTATC                                                 <  SRR4302542.2319409/94‑1 (MQ=60)
                                               TGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCG                                                <  SRR4302542.6779117/94‑1 (MQ=60)
                                               TGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCG                                                <  SRR4302542.6986970/94‑1 (MQ=60)
                                                 ATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGAT                                              <  SRR4302542.7254253/94‑1 (MQ=60)
                                                 ATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGAT                                              >  SRR4302542.7486407/1‑94 (MQ=60)
                                                  cttccgatctgagagtTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATG                                             <  SRR4302542.5058118/78‑1 (MQ=60)
                                                   TTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGC                                            <  SRR4302542.6595631/94‑1 (MQ=60)
                                                   TTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGC                                            <  SRR4302542.1377769/94‑1 (MQ=60)
                                                     TCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCT                                          >  SRR4302542.3953849/1‑94 (MQ=60)
                                                     TCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCT                                          <  SRR4302542.131244/94‑1 (MQ=60)
                                                      CTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTT                                         <  SRR4302542.4668529/94‑1 (MQ=60)
                                                       TCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTT                                        <  SRR4302542.4140861/94‑1 (MQ=60)
                                                        CACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTT                                       <  SRR4302542.5342521/94‑1 (MQ=60)
                                                        CACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTT                                       >  SRR4302542.1666880/1‑94 (MQ=60)
                                                         ACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTT                                      >  SRR4302542.1445259/1‑94 (MQ=60)
                                                         ACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTT                                      >  SRR4302542.4208620/1‑94 (MQ=60)
                                                         ACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTT                                      <  SRR4302542.5854242/94‑1 (MQ=60)
                                                         ACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTT                                      <  SRR4302542.204589/94‑1 (MQ=60)
                                                         ACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTT                                      <  SRR4302542.1359754/94‑1 (MQ=60)
                                                         ACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTT                                      <  SRR4302542.4708460/94‑1 (MQ=60)
                                                          CGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTT                                     <  SRR4302542.2325576/94‑1 (MQ=60)
                                                          CGAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTT                                     >  SRR4302542.6537602/1‑94 (MQ=60)
                                                          CGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTT                                     <  SRR4302542.2182856/94‑1 (MQ=60)
                                                           GAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTA                                    <  SRR4302542.3175992/94‑1 (MQ=60)
                                                           GAATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTA                                    >  SRR4302542.6837530/1‑94 (MQ=60)
                                                           GAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTA                                    >  SRR4302542.1219219/1‑94 (MQ=60)
                                                           GAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTA                                    >  SRR4302542.5452187/1‑94 (MQ=60)
                                                            AATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTAT                                   <  SRR4302542.218087/94‑1 (MQ=60)
                                                            AATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTAT                                   <  SRR4302542.308338/94‑1 (MQ=60)
                                                            AATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTAT                                   <  SRR4302542.2905773/94‑1 (MQ=60)
                                                             ATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATC                                  <  SRR4302542.5898197/94‑1 (MQ=60)
                                                             ATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATC                                  <  SRR4302542.7003313/94‑1 (MQ=60)
                                                             ATACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATC                                  >  SRR4302542.616652/1‑94 (MQ=60)
                                                             ATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATC                                  <  SRR4302542.5891201/94‑1 (MQ=60)
                                                              TACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCG                                 <  SRR4302542.3179983/94‑1 (MQ=60)
                                                              TACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCG                                 >  SRR4302542.6050107/1‑94 (MQ=60)
                                                              TACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCG                                 <  SRR4302542.3286016/94‑1 (MQ=60)
                                                               ACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGA                                <  SRR4302542.6651417/94‑1 (MQ=60)
                                                               ACCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGA                                >  SRR4302542.7535350/1‑94 (MQ=60)
                                                                CCTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGAT                               <  SRR4302542.6828217/94‑1 (MQ=60)
                                                                 CTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATT                              <  SRR4302542.5228816/94‑1 (MQ=60)
                                                                 CTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATT                              >  SRR4302542.1608190/1‑94 (MQ=60)
                                                                 CTTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATT                              >  SRR4302542.6223477/1‑94 (MQ=60)
                                                                  TTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTA                             >  SRR4302542.662519/1‑94 (MQ=60)
                                                                  TTTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTA                             <  SRR4302542.6966714/94‑1 (MQ=60)
                                                                   TTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTAC                            <  SRR4302542.1530250/94‑1 (MQ=60)
                                                                   TTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTAC                            <  SRR4302542.3849321/94‑1 (MQ=60)
                                                                   TTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTAC                            <  SRR4302542.6642453/94‑1 (MQ=60)
                                                                   TTAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTAC                            >  SRR4302542.6697912/1‑94 (MQ=60)
                                                                   TTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTAC                            >  SRR4302542.2537774/1‑94 (MQ=60)
                                                                    TAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACA                           <  SRR4302542.2905852/94‑1 (MQ=60)
                                                                    TAGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACA                           <  SRR4302542.7269897/94‑1 (MQ=60)
                                                                     AGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACAC                          >  SRR4302542.5762795/1‑94 (MQ=60)
                                                                     AGCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACAC                          >  SRR4302542.5745472/1‑94 (MQ=60)
                                                                     AGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACAC                          >  SRR4302542.3555242/1‑94 (MQ=60)
                                                                      GCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACG                         <  SRR4302542.4346961/94‑1 (MQ=60)
                                                                      GCCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACG                         >  SRR4302542.4181860/1‑94 (MQ=60)
                                                                       CCATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGC                        <  SRR4302542.4915147/94‑1 (MQ=60)
                                                                        CATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCA                       >  SRR4302542.4628824/1‑94 (MQ=60)
                                                                        CATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCA                       <  SRR4302542.6009410/94‑1 (MQ=60)
                                                                        CATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCA                       >  SRR4302542.4526948/1‑94 (MQ=60)
                                                                         ATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCAT                      >  SRR4302542.6392608/1‑94 (MQ=60)
                                                                         ATGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCAT                      <  SRR4302542.5635974/94‑1 (MQ=60)
                                                                          TGATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATA                     >  SRR4302542.139338/1‑94 (MQ=60)
                                                                           GATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATAC                    >  SRR4302542.1946270/1‑94 (MQ=60)
                                                                           GATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATAC                    >  SRR4302542.3945890/1‑94 (MQ=60)
                                                                            ATTTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACC                   >  SRR4302542.3729107/1‑94 (MQ=60)
                                                                              TTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACCACCATACCTT                 >  SRR4302542.2405079/1‑94 (MQ=60)
                                                                              TTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTT                 >  SRR4302542.5178241/1‑94 (MQ=60)
                                                                              TTATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTT                 >  SRR4302542.6524196/1‑94 (MQ=60)
                                                                               TATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTTTCGTTTACACGAATACTTTT                >  SRR4302542.2552202/1‑94 (MQ=60)
                                                                               TATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTT                <  SRR4302542.4227221/94‑1 (MQ=60)
                                                                                ATTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTA               <  SRR4302542.3303164/94‑1 (MQ=60)
                                                                                 TTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAG              >  SRR4302542.3001586/1‑94 (MQ=60)
                                                                                 TTTCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAG              <  SRR4302542.3139355/94‑1 (MQ=60)
                                                                                 TTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAG              >  SRR4302542.1048013/1‑94 (MQ=60)
                                                                                   TCCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCA            <  SRR4302542.4834903/94‑1 (MQ=60)
                                                                                    CCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAG           >  SRR4302542.6640424/1‑94 (MQ=60)
                                                                                    CCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAG           >  SRR4302542.3340345/1‑94 (MQ=60)
                                                                                    CCTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAG           <  SRR4302542.3918749/94‑1 (MQ=60)
                                                                                     CTCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGA          >  SRR4302542.5255216/1‑94 (MQ=60)
                                                                                     CTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGA          >  SRR4302542.7237070/1‑94 (MQ=60)
                                                                                     CTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGA          >  SRR4302542.7605329/1‑94 (MQ=60)
                                                                                      TCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGAT         >  SRR4302542.785725/1‑94 (MQ=60)
                                                                                      TCTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGAT         <  SRR4302542.475295/94‑1 (MQ=60)
                                                                                      TCTAAGTACTTAGTACTTTTCGCCACAGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGAT         <  SRR4302542.5481162/94‑1 (MQ=60)
                                                                                       CTAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACGCGCATACCTTTAGCAGATA        >  SRR4302542.3400598/1‑94 (MQ=60)
                                                                                        TAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATAC       <  SRR4302542.4554058/94‑1 (MQ=60)
                                                                                        TAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATAC       >  SRR4302542.5938725/1‑94 (MQ=60)
                                                                                        TAAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATAC       <  SRR4302542.3355660/94‑1 (MQ=60)
                                                                                         AAGTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATACG      <  SRR4302542.1378596/94‑1 (MQ=60)
                                                                                           GTGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATACGCG    >  SRR4302542.2374579/1‑94 (MQ=60)
                                                                                            TGCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATACGCGC   >  SRR4302542.4159528/1‑94 (MQ=60)
                                                                                            TACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATACGCGC   >  SRR4302542.5898178/1‑94 (MQ=60)
                                                                                             GCTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATACGCGCA  >  SRR4302542.3224067/1‑94 (MQ=60)
                                                                                             ACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATACGCGCA  >  SRR4302542.4896470/1‑94 (MQ=60)
                                                                                             ACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATACGCGCA  >  SRR4302542.4143807/1‑94 (MQ=60)
                                                                                             |                                                                                             
CTTCGTAGTGGTATAGAAGTGACCAGTACCAGCAGAAGAAACCAGCTTGATTTTCTCACGAATACCTTTAGCCATGATTTATTTCCTCTAAGTACTTAGTACTTTTCGCCACGGGCACGCAGTTCAGCCAGAACTGTATCGATGCCTTTTTTATCGATTACACGCATACCTTTAGCAGATACGCGCA  >  NC_000913/3808970‑3809156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑