Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,857,430	A→G	I105T (ATC→ACC)	yidK ←	putative cotransporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,857,430	0	A	G	85.4%	709.0 / 108.2	302	I105T (ATC→ACC)	yidK	putative cotransporter
Reads supporting (aligned to +/- strand): ref base A (25/19); new base G (134/124); total (159/143)
Fisher's exact test for biased strand distribution p-value = 6.25e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.91e-01

Only 100 of 315 total aligned reads displayed.

TCGGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATCAC  >  NC_000913/3857338‑3857521

tCGGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGa                                                                                             >  2:5991361/1‑93 (MQ=255)

  ggCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGtg                                                                                           >  2:694291/1‑93 (MQ=255)

     aGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGgtggtg                                                                                        >  2:3148084/1‑93 (MQ=255)

     aGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGAtggtg                                                                                        <  2:7494792/93‑1 (MQ=255)

      gAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGtggtgg                                                                                       >  1:1547991/1‑93 (MQ=255)

      gAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGtggtgg                                                                                       >  2:6472452/1‑93 (MQ=255)

      gAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGtggtgg                                                                                       >  1:2695366/1‑93 (MQ=255)

      gAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGTAtggtgg                                                                                       >  1:2048063/1‑93 (MQ=255)

       aaaGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGc                                                                                      <  1:7469003/93‑1 (MQ=255)

        aaGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCa                                                                                     >  2:4141999/1‑93 (MQ=255)

         aGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCaa                                                                                    <  1:1654438/93‑1 (MQ=255)

            aGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGc                                                                                 >  2:2736077/1‑93 (MQ=255)

             gACGCCGGTGGCAATTAGGAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGcc                                                                                >  1:2208210/1‑93 (MQ=255)

                 ccGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCgcgc                                                                            <  1:941606/93‑1 (MQ=255)

                  cGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCt                                                                           >  1:6389855/1‑93 (MQ=255)

                   ggTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCtt                                                                          <  1:3190692/93‑1 (MQ=255)

                   ggTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCtt                                                                          >  2:1116692/1‑93 (MQ=255)

                    gTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTc                                                                         >  2:549175/1‑93 (MQ=255)

                     tGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCa                                                                        >  1:5895404/1‑93 (MQ=255)

                     tGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCa                                                                        <  2:200988/93‑1 (MQ=255)

                     tGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTCCCACCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCa                                                                        <  1:7404671/93‑1 (MQ=255)

                      ggCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAg                                                                       >  2:3819412/1‑93 (MQ=255)

                      ggCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAg                                                                       >  1:6907778/1‑93 (MQ=255)

                       gCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGa                                                                      >  1:2437006/1‑93 (MQ=255)

                       gCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGa                                                                      <  1:5471312/93‑1 (MQ=255)

                         aaTTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATa                                                                    >  2:320475/1‑93 (MQ=255)

                         aaTTAGGAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATa                                                                    >  1:1715347/1‑93 (MQ=255)

                         aaTTAGGAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATa                                                                    >  2:1775878/1‑93 (MQ=255)

                               gAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCgg                                                              <  1:3683633/93‑1 (MQ=255)

                                 aGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTa                                                            >  1:5099136/1‑93 (MQ=255)

                                  gCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTaa                                                           >  2:2452022/1‑93 (MQ=255)

                                  gCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTaa                                                           >  2:1361094/1‑93 (MQ=255)

                                     gAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTaaaaa                                                        >  2:4448989/1‑93 (MQ=255)

                                     gAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTaaaaa                                                        <  2:7111237/93‑1 (MQ=255)

                                     gAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTaaaaa                                                        >  2:370066/1‑93 (MQ=255)

                                      aaGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAg                                                       >  2:7315409/1‑93 (MQ=255)

                                       aGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGa                                                      <  2:4395580/93‑1 (MQ=255)

                                       aGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGa                                                      >  2:3542126/1‑93 (MQ=255)

                                        gTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGAt                                                     <  2:757817/93‑1 (MQ=255)

                                         tCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGAtt                                                    <  1:6821479/93‑1 (MQ=255)

                                         tCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGAtt                                                    <  2:5735989/93‑1 (MQ=255)

                                          caatgatAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTa                                                   <  1:3115437/91‑1 (MQ=255)

                                          cGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTa                                                   <  1:4351766/93‑1 (MQ=255)

                                          cGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTa                                                   <  1:469881/93‑1 (MQ=255)

                                           gatgatAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAg                                                  <  2:6357547/93‑1 (MQ=255)

                                            atgatAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAgc                                                 >  2:1640603/1‑93 (MQ=255)

                                            atgatAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAgc                                                 <  2:2682779/93‑1 (MQ=255)

                                              gatAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAgcgc                                               >  1:1239715/1‑93 (MQ=255)

                                                taataCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGa                                             <  2:308812/93‑1 (MQ=255)

                                                taataCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGa                                             >  2:6220618/1‑93 (MQ=255)

                                                  ataCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAgg                                           >  1:5555425/1‑93 (MQ=255)

                                                  ataCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAgg                                           >  2:2216274/1‑93 (MQ=255)

                                                   taCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGa                                          >  1:3976824/1‑93 (MQ=255)

                                                    aCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGaa                                         <  1:7362776/93‑1 (MQ=255)

                                                     cgcgTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAg                                        <  1:2634364/93‑1 (MQ=255)

                                                     cgcgTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAg                                        >  1:1035836/1‑93 (MQ=255)

                                                      gcgTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGa                                       <  2:3346082/93‑1 (MQ=255)

                                                      gcgTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGa                                       >  1:6748013/1‑93 (MQ=255)

                                                      gcgTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGa                                       >  2:4672947/1‑93 (MQ=255)

                                                      gcgTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGa                                       >  2:4034338/1‑93 (MQ=255)

                                                       cgtcgtTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGAt                                      <  1:6314015/93‑1 (MQ=255)

                                                        gtcgtTTTATCATAACGTTCCTCCAGAAAATCGGGGGCGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATc                                     >  1:1859295/1‑93 (MQ=255)

                                                         tcgtTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCa                                    >  2:2099563/1‑93 (MQ=255)

                                                         tcgtTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCa                                    <  1:2886365/93‑1 (MQ=255)

                                                         tcgtTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCa                                    >  1:2982851/1‑93 (MQ=255)

                                                          cgtTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAg                                   <  1:4903027/93‑1 (MQ=255)

                                                          cgtTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAg                                   <  2:5361472/93‑1 (MQ=255)

                                                           gtTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGc                                  >  2:3899696/1‑93 (MQ=255)

                                                           gtTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGc                                  <  1:7134807/93‑1 (MQ=255)

                                                            ttttATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCg                                 >  1:5960094/1‑93 (MQ=255)

                                                            ttttATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCg                                 >  1:5687003/1‑93 (MQ=255)

                                                             tttATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCGATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGt                                >  1:6211501/1‑93 (MQ=255)

                                                              ttATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTc                               >  2:5210904/1‑93 (MQ=255)

                                                              ttATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTc                               <  2:2884166/93‑1 (MQ=255)

                                                                aTCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCAc                             <  2:6718783/93‑1 (MQ=255)

                                                                 tCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCAcc                            <  1:5355795/93‑1 (MQ=255)

                                                                   aTAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGc                          >  1:282924/1‑93 (MQ=255)

                                                                   aTAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGc                          <  1:3301616/93‑1 (MQ=255)

                                                                       cGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGaa                      <  2:121169/93‑1 (MQ=255)

                                                                       cGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGaa                      <  1:1469548/93‑1 (MQ=255)

                                                                        gTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAg                     >  2:366074/1‑93 (MQ=255)

                                                                        gTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAg                     >  1:6470140/1‑93 (MQ=255)

                                                                          tcctccAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTc                   <  1:6596001/93‑1 (MQ=255)

                                                                           cctccAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCa                  >  2:4840075/1‑93 (MQ=255)

                                                                           cctccAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCa                  >  1:7261384/1‑93 (MQ=255)

                                                                           cctccAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCa                  <  2:2169373/93‑1 (MQ=255)

                                                                            ctccAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCAc                 >  2:6264808/1‑93 (MQ=255)

                                                                               cAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTc              <  1:3418709/93‑1 (MQ=255)

                                                                               cAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTc              <  1:2301184/93‑1 (MQ=255)

                                                                                 gAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTccc            >  2:5557927/1‑93 (MQ=255)

                                                                                 gAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTccc            >  2:1568529/1‑93 (MQ=255)

                                                                                  aaaaTCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCa           <  1:2540849/93‑1 (MQ=255)

                                                                                   aaaTCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAg          >  1:4265050/1‑93 (MQ=255)

                                                                                   aaaTCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAg          <  2:4300409/93‑1 (MQ=255)

                                                                                     aTCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGcc        <  2:4125902/93‑1 (MQ=255)

                                                                                     aTCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAATAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGcc        >  2:7071125/1‑93 (MQ=255)

                                                                                      tCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGccc       >  1:1160775/1‑93 (MQ=255)

                                                                                      tCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGccc       >  2:4999286/1‑93 (MQ=255)

                                                                                       cGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCa      <  1:3573808/93‑1 (MQ=255)

                                                                                        ggggGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCAt     >  1:4997408/1‑93 (MQ=255)

TCGGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATCAC  >  NC_000913/3857338‑3857521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATCACCG  >  NC_000913/3857337‑3857523

ATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGG                                                                                               >  SRR4302542.5730903/1‑94 (MQ=60)

 TCGGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATCCGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGT                                                                                              <  SRR4302542.7431300/94‑1 (MQ=60)

 TCGGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGT                                                                                              <  SRR4302542.1277128/94‑1 (MQ=60)

 GCGGCAGAAAGCAGACGCCGGTGGGCATTAGGAAGCAGAAGTCGATGATAATACGGGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGT                                                                                              <  SRR4302542.6683091/94‑1 (MQ=60)

   GGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGG                                                                                            >  SRR4302542.1059020/1‑94 (MQ=60)

   GGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGG                                                                                            >  SRR4302542.3016154/1‑94 (MQ=60)

    GCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGT                                                                                           >  SRR4302542.7428529/1‑94 (MQ=60)

    GCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGT                                                                                           >  SRR4302542.1506061/1‑94 (MQ=60)

     CAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTG                                                                                          <  SRR4302542.3334769/94‑1 (MQ=60)

     CAGAAAGCAGACGCCGGGGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGGG                                                                                          >  SRR4302542.6547079/1‑94 (MQ=60)

      AGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGG                                                                                         >  SRR4302542.1561353/1‑94 (MQ=60)

      AGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGG                                                                                         >  SRR4302542.7301896/1‑94 (MQ=60)

      AGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGG                                                                                         >  SRR4302542.2721356/1‑94 (MQ=60)

      AGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGG                                                                                         <  SRR4302542.2873892/94‑1 (MQ=60)

      AGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGTATGGTGG                                                                                         >  SRR4302542.2065765/1‑94 (MQ=60)

      AGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGG                                                                                         >  SRR4302542.1560269/1‑94 (MQ=60)

       GAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGC                                                                                        <  SRR4302542.7008753/94‑1 (MQ=60)

        AAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCA                                                                                       <  SRR4302542.7542183/94‑1 (MQ=60)

         AAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAA                                                                                      >  SRR4302542.7517424/1‑94 (MQ=60)

          AGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAAT                                                                                     <  SRR4302542.1668729/94‑1 (MQ=60)

          AGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAAT                                                                                     >  SRR4302542.3984291/1‑94 (MQ=60)

           GCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATG                                                                                    <  SRR4302542.6008281/94‑1 (MQ=60)

            CAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGC                                                                                   <  SRR4302542.7439045/94‑1 (MQ=60)

            CAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGC                                                                                   <  SRR4302542.4764796/94‑1 (MQ=60)

            CAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGC                                                                                   <  SRR4302542.6394844/94‑1 (MQ=60)

             AGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCC                                                                                  >  SRR4302542.1565595/1‑94 (MQ=60)

             AGACGCCGGTGGCAATTAGGAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCC                                                                                  >  SRR4302542.2227215/1‑94 (MQ=60)

              GACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCG                                                                                 <  SRR4302542.1317101/94‑1 (MQ=60)

               ACGCCGGTGGCAATTAGGAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGC                                                                                <  SRR4302542.307096/94‑1 (MQ=60)

                  CCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCT                                                                             >  SRR4302542.6452807/1‑94 (MQ=60)

                  CCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCT                                                                             <  SRR4302542.949708/94‑1 (MQ=60)

                  CCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCT                                                                             <  SRR4302542.1258478/94‑1 (MQ=60)

                    GGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTC                                                                           <  SRR4302542.3220909/94‑1 (MQ=60)

                    GGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTC                                                                           >  SRR4302542.4003625/1‑94 (MQ=60)

                    GGTGGCAATTAGGAAGCAGAAATCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGACGCGCTTC                                                                           >  SRR4302542.5749935/1‑94 (MQ=60)

                     GTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCA                                                                          >  SRR4302542.5952539/1‑94 (MQ=60)

                     GTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCA                                                                          >  SRR4302542.4471972/1‑94 (MQ=60)

                      TGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAG                                                                         >  SRR4302542.6975590/1‑94 (MQ=60)

                      TGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAG                                                                         <  SRR4302542.2986262/94‑1 (MQ=60)

                      TGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTCCCACCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAG                                                                         <  SRR4302542.7477139/94‑1 (MQ=60)

                       GGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGA                                                                        >  SRR4302542.2460715/1‑94 (MQ=60)

                       GGCAATTAGGAAGCAGAAGTCGACGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGA                                                                        <  SRR4302542.2378528/94‑1 (MQ=60)

                        GCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGAT                                                                       <  SRR4302542.4772590/94‑1 (MQ=60)

                        GCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGAT                                                                       <  SRR4302542.5524471/94‑1 (MQ=60)

                         CAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATA                                                                      <  SRR4302542.1712142/94‑1 (MQ=60)

                         CAATTAGGAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATA                                                                      >  SRR4302542.1730248/1‑94 (MQ=60)

                          AATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAG                                                                     >  SRR4302542.689179/1‑94 (MQ=60)

                          AATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAG                                                                     >  SRR4302542.3531097/1‑94 (MQ=60)

                          AATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAG                                                                     <  SRR4302542.1713961/94‑1 (MQ=60)

                           ATTAGGAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGC                                                                    >  SRR4302542.7468808/1‑94 (MQ=60)

                            TTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCG                                                                   <  SRR4302542.236509/94‑1 (MQ=60)

                              AGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCG                                                                 <  SRR4302542.4385985/94‑1 (MQ=60)

                              AGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCG                                                                 >  SRR4302542.6834677/1‑94 (MQ=60)

                               GGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGG                                                                >  SRR4302542.1862235/1‑94 (MQ=60)

                               GGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGG                                                                <  SRR4302542.3622345/94‑1 (MQ=60)

                               GGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGG                                                                >  SRR4302542.5032865/1‑94 (MQ=60)

                               CGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGG                                                                >  SRR4302542.550760/1‑94 (MQ=60)

                                GAAGCAGAAGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGT                                                               <  SRR4302542.3719818/94‑1 (MQ=60)

                                 AAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTA                                                              <  SRR4302542.2703241/94‑1 (MQ=60)

                                 AAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTA                                                              >  SRR4302542.1185822/1‑94 (MQ=60)

                                 AAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTA                                                              >  SRR4302542.5148684/1‑94 (MQ=60)

                                  AGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAA                                                             <  SRR4302542.104571/94‑1 (MQ=60)

                                  AGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAA                                                             <  SRR4302542.2729672/94‑1 (MQ=60)

                                  AGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAA                                                             >  SRR4302542.1881193/1‑94 (MQ=60)

                                     AGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAA                                                          >  SRR4302542.5707381/1‑94 (MQ=60)

                                       AAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGA                                                        >  SRR4302542.4389157/1‑94 (MQ=60)

                                       AAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGA                                                        >  SRR4302542.4147119/1‑94 (MQ=60)

                                        AGTCAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGAT                                                       >  SRR4302542.6403556/1‑94 (MQ=60)

                                         GTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATT                                                      <  SRR4302542.1804594/94‑1 (MQ=60)

                                          TCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTA                                                     <  SRR4302542.6888531/94‑1 (MQ=60)

                                           CGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAG                                                    <  SRR4302542.473950/94‑1 (MQ=60)

                                           CGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAG                                                    >  SRR4302542.330966/1‑94 (MQ=60)

                                           CGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAG                                                    <  SRR4302542.1794977/94‑1 (MQ=60)

                                           CGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAG                                                    <  SRR4302542.4394524/94‑1 (MQ=60)

                                           CAATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAG                                                    <  SRR4302542.3145040/94‑1 (MQ=60)

                                            GATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGC                                                   <  SRR4302542.7591899/94‑1 (MQ=60)

                                             ATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCG                                                  >  SRR4302542.7536049/1‑94 (MQ=60)

                                             ATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCG                                                  <  SRR4302542.5682273/94‑1 (MQ=60)

                                             ATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCG                                                  <  SRR4302542.189491/94‑1 (MQ=60)

                                              TGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGC                                                 >  SRR4302542.2617539/1‑94 (MQ=60)

                                              TGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGC                                                 >  SRR4302542.1250369/1‑94 (MQ=60)

                                              TGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGC                                                 >  SRR4302542.3157178/1‑94 (MQ=60)

                                               GATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCG                                                <  SRR4302542.5636948/94‑1 (MQ=60)

                                                 TAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAG                                              <  SRR4302542.4197926/94‑1 (MQ=60)

                                                 TAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAG                                              <  SRR4302542.2950742/94‑1 (MQ=60)

                                                  AATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGG                                             <  SRR4302542.2206965/94‑1 (MQ=60)

                                                  AATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGG                                             <  SRR4302542.6852242/94‑1 (MQ=60)

                                                  AATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGG                                             >  SRR4302542.5609404/1‑94 (MQ=60)

                                                  AATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGGGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGG                                             >  SRR4302542.646674/1‑94 (MQ=60)

                                                   ATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGA                                            >  SRR4302542.4016063/1‑94 (MQ=60)

                                                   ATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGA                                            >  SRR4302542.5608009/1‑94 (MQ=60)

                                                    TACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAA                                           <  SRR4302542.54529/94‑1 (MQ=60)

                                                     ACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAG                                          <  SRR4302542.7434895/94‑1 (MQ=60)

                                                     ACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAG                                          >  SRR4302542.3609114/1‑94 (MQ=60)

                                                     ACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAG                                          >  SRR4302542.1044740/1‑94 (MQ=60)

                                                      CGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGA                                         >  SRR4302542.6814413/1‑94 (MQ=60)

                                                      CGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGA                                         <  SRR4302542.2659809/94‑1 (MQ=60)

                                                      CGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGA                                         >  SRR4302542.5051819/1‑94 (MQ=60)

                                                       GCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGAT                                        >  SRR4302542.6673445/1‑94 (MQ=60)

                                                       GCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGAT                                        <  SRR4302542.2150294/94‑1 (MQ=60)

                                                       GCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGAT                                        <  SRR4302542.5969691/94‑1 (MQ=60)

                                                        CGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATC                                       <  SRR4302542.6376258/94‑1 (MQ=60)

                                                        CGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATC                                       >  SRR4302542.5591557/1‑94 (MQ=60)

                                                        CGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGCGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATC                                       >  SRR4302542.1875355/1‑94 (MQ=60)

                                                        CGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATC                                       >  SRR4302542.7213984/1‑94 (MQ=60)

                                                         GTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCA                                      >  SRR4302542.3214161/1‑94 (MQ=60)

                                                         GTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCA                                      >  SRR4302542.3011408/1‑94 (MQ=60)

                                                         GTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCA                                      <  SRR4302542.2467791/94‑1 (MQ=60)

                                                          TCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAG                                     <  SRR4302542.2914081/94‑1 (MQ=60)

                                                          TCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAG                                     >  SRR4302542.4589895/1‑94 (MQ=60)

                                                           CGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGC                                    <  SRR4302542.2700295/94‑1 (MQ=60)

                                                           CGTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGC                                    <  SRR4302542.4950724/94‑1 (MQ=60)

                                                            GTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCG                                   >  SRR4302542.7402160/1‑94 (MQ=60)

                                                            GTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCG                                   >  SRR4302542.3448113/1‑94 (MQ=60)

                                                            GTTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCG                                   >  SRR4302542.6017806/1‑94 (MQ=60)

                                                            GTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCG                                   >  SRR4302542.5742225/1‑94 (MQ=60)

                                                            GTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCG                                   <  SRR4302542.7204826/94‑1 (MQ=60)

                                                             TTTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCGATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGT                                  >  SRR4302542.6272700/1‑94 (MQ=60)

                                                              TTTATCATAACGTTCCTCCGGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTC                                 >  SRR4302542.1562686/1‑94 (MQ=60)

                                                              TTTATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTC                                 <  SRR4302542.7092518/94‑1 (MQ=60)

                                                                 ATCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACC                              >  SRR4302542.2581828/1‑94 (MQ=60)

                                                                  TCATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCG                             <  SRR4302542.5407849/94‑1 (MQ=60)

                                                                   CATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGC                            <  SRR4302542.5071106/94‑1 (MQ=60)

                                                                   CATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGC                            >  SRR4302542.285392/1‑94 (MQ=60)

                                                                   CATAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGC                            >  SRR4302542.5299981/1‑94 (MQ=60)

                                                                    ATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCT                           <  SRR4302542.3332758/94‑1 (MQ=60)

                                                                     TAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTG                          >  SRR4302542.3536069/1‑94 (MQ=60)

                                                                     TAACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTG                          >  SRR4302542.644680/1‑94 (MQ=60)

                                                                      AACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGA                         <  SRR4302542.2279967/94‑1 (MQ=60)

                                                                      AACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGA                         <  SRR4302542.4963116/94‑1 (MQ=60)

                                                                       ACGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAA                        >  SRR4302542.2472726/1‑94 (MQ=60)

                                                                        CGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAG                       >  SRR4302542.6307066/1‑94 (MQ=60)

                                                                        CGTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAA                       <  SRR4302542.1482236/94‑1 (MQ=60)

                                                                        CGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAG                       >  SRR4302542.5762547/1‑94 (MQ=60)

                                                                        CGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAG                       >  SRR4302542.6533888/1‑94 (MQ=60)

                                                                         GTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGT                      >  SRR4302542.792637/1‑94 (MQ=60)

                                                                         GTTCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGT                      >  SRR4302542.6331210/1‑94 (MQ=60)

                                                                           TCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCA                    <  SRR4302542.6660990/94‑1 (MQ=60)

                                                                           TCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCA                    <  SRR4302542.6660991/94‑1 (MQ=60)

                                                                           TCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCA                    >  SRR4302542.6531438/1‑94 (MQ=60)

                                                                           TCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCA                    >  SRR4302542.7332570/1‑94 (MQ=60)

                                                                           TCCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCA                    >  SRR4302542.6891076/1‑94 (MQ=60)

                                                                            CCTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCAC                   >  SRR4302542.736957/1‑94 (MQ=60)

                                                                             CTCCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACT                  <  SRR4302542.1176159/94‑1 (MQ=60)

                                                                               CCAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTC                <  SRR4302542.322893/94‑1 (MQ=60)

                                                                                CAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCC               <  SRR4302542.3450738/94‑1 (MQ=60)

                                                                                CAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCC               <  SRR4302542.2900859/94‑1 (MQ=60)

                                                                                CAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCC               <  SRR4302542.2749354/94‑1 (MQ=60)

                                                                                CAGAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCC               <  SRR4302542.2320955/94‑1 (MQ=60)

                                                                                  GAAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCA             <  SRR4302542.5407539/94‑1 (MQ=60)

                                                                                  GAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCA             <  SRR4302542.2262954/94‑1 (MQ=60)

                                                                                   AAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAG            <  SRR4302542.3286414/94‑1 (MQ=60)

                                                                                   AAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAG            <  SRR4302542.2565480/94‑1 (MQ=60)

                                                                                   AAAATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAG            >  SRR4302542.4307031/1‑94 (MQ=60)

                                                                                      ATCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCC         >  SRR4302542.1170732/1‑94 (MQ=60)

                                                                                       TCGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAACGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCA        >  SRR4302542.4444411/1‑94 (MQ=60)

                                                                                        CGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCAT       <  SRR4302542.6202005/94‑1 (MQ=60)

                                                                                        CGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCAT       <  SRR4302542.3607166/94‑1 (MQ=60)

                                                                                        CGGGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCAT       >  SRR4302542.5045957/1‑94 (MQ=60)

                                                                                          GGGGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATCA     <  SRR4302542.6737131/94‑1 (MQ=60)

                                                                                           GGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATCAC    <  SRR4302542.2706729/94‑1 (MQ=60)

                                                                                            GGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATCACC   >  SRR4302542.1732154/1‑94 (MQ=60)

                                                                                            GGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATCACC   <  SRR4302542.4020913/94‑1 (MQ=60)

                                                                                            GGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATCACC   >  SRR4302542.6441788/1‑94 (MQ=60)

                                                                                            GGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATCACC   <  SRR4302542.550552/94‑1 (MQ=60)

                                                                                            GGTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATCACC   <  SRR4302542.2549962/94‑1 (MQ=60)

                                                                                            GGTGGTGGCAATGCCCCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCTCCGCTGAAGTCCCTTCCCAGCCCATCACC   <  SRR4302542.736637/94‑1 (MQ=60)

                                                                                            GATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATCACC   <  SRR4302542.6185270/94‑1 (MQ=60)

                                                                                             GTGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATCACCG  <  SRR4302542.6877814/94‑1 (MQ=60)

ATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGATAGCGCGGTAAAAAGATTAGCGCGAGGAAGATCAGCGTCACCGCTGAAGTCACTTCCCAGCCCATCACCG  >  NC_000913/3857337‑3857523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`