Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,866,583 A→G S119S (AGT→AGC)  yidR ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,866,5830AG84.1% 729.0 / 125.0 320S119S (AGT→AGC) yidRhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (32/19);  new base G (128/141);  total (160/160)
Fisher's exact test for biased strand distribution p-value = 6.61e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.87e-01

Only 100 of 322 total aligned reads displayed.

CTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAA  >  NC_000913/3866491‑3866674
                                                                                            |                                                                                           
cTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTa                                                                                             >  1:4046983/1‑93 (MQ=255)
   tCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTc                                                                                          <  2:4459814/93‑1 (MQ=255)
     aCCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCAt                                                                                        >  2:1992361/1‑93 (MQ=255)
       cGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCt                                                                                      <  1:4299165/93‑1 (MQ=255)
       cGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCt                                                                                      <  1:3788877/93‑1 (MQ=255)
       cGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCt                                                                                      <  2:5249801/93‑1 (MQ=255)
       cGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCt                                                                                      <  2:6935852/93‑1 (MQ=255)
       cGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCt                                                                                      <  1:1007853/93‑1 (MQ=255)
        gTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCtt                                                                                     <  2:3815239/93‑1 (MQ=255)
        gTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCtt                                                                                     >  1:2938002/1‑93 (MQ=255)
        gTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCtt                                                                                     >  1:5888106/1‑93 (MQ=255)
         ttCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTg                                                                                    >  2:4715722/1‑93 (MQ=255)
          tCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTgc                                                                                   <  1:7113158/93‑1 (MQ=255)
          tCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTgc                                                                                   <  2:5897378/93‑1 (MQ=255)
             ggCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTgccgc                                                                                >  2:13190/1‑93 (MQ=255)
               cTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCt                                                                              >  1:5115325/1‑93 (MQ=255)
                  aaGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTca                                                                           <  1:134291/93‑1 (MQ=255)
                   aGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTcaa                                                                          >  2:336103/1‑93 (MQ=255)
                    gACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTcaac                                                                         <  1:6256473/93‑1 (MQ=255)
                     aCATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTcaaca                                                                        <  2:38803/93‑1 (MQ=255)
                      cATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTcaacaa                                                                       <  1:3449484/93‑1 (MQ=255)
                      cATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTcaacaa                                                                       <  1:4332053/93‑1 (MQ=255)
                       aTGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAAt                                                                      >  2:7524882/1‑93 (MQ=255)
                        tGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATc                                                                     <  2:6279771/93‑1 (MQ=255)
                             aTGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTcc                                                                <  1:5992605/93‑1 (MQ=255)
                               ggCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCcgc                                                              <  2:4635074/93‑1 (MQ=255)
                                 cTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCgcgc                                                            <  2:1091306/93‑1 (MQ=255)
                                     cgccgcGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCgat                                                        <  1:5529703/93‑1 (MQ=255)
                                      gccgcGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCgatg                                                       >  1:6367046/1‑93 (MQ=255)
                                      gccgcGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCgatg                                                       >  2:2786351/1‑93 (MQ=255)
                                       ccgcGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCgatga                                                      <  2:5082619/93‑1 (MQ=255)
                                       ccgcGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCgatga                                                      <  1:5179878/93‑1 (MQ=255)
                                       ccgcGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCgatga                                                      <  2:6184690/93‑1 (MQ=255)
                                       ccgcGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCgatga                                                      <  2:2322501/93‑1 (MQ=255)
                                         gcgcAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGatgatg                                                    >  2:2100187/1‑93 (MQ=255)
                                            cagcaCTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGaa                                                 >  1:4141145/1‑93 (MQ=255)
                                             agcaCTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAg                                                <  1:1642536/93‑1 (MQ=255)
                                             agcaCTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAg                                                <  1:5734320/93‑1 (MQ=255)
                                              gcaCTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGt                                               <  1:6516255/93‑1 (MQ=255)
                                               caCTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTc                                              <  2:498737/93‑1 (MQ=255)
                                                aCTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCg                                             >  2:6588864/1‑93 (MQ=255)
                                                 cTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGt                                            >  1:3572292/1‑93 (MQ=255)
                                                  tCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTa                                           <  2:3922705/93‑1 (MQ=255)
                                                   ccTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTaa                                          <  1:2239007/93‑1 (MQ=255)
                                                     tGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATg                                        >  1:4168793/1‑93 (MQ=255)
                                                      ggCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGc                                       >  1:250872/1‑93 (MQ=255)
                                                       gCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGcc                                      >  1:6123687/1‑93 (MQ=255)
                                                         gTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCAt                                    <  2:4108128/93‑1 (MQ=255)
                                                         gTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCAt                                    >  2:5538927/1‑93 (MQ=255)
                                                         gTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCAt                                    <  1:2835309/93‑1 (MQ=255)
                                                         gTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCAt                                    >  1:3073890/1‑93 (MQ=255)
                                                          tataCGGCGCGGTAATATCCATCGCATCAAGGTTGTTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATg                                   >  1:4803376/1‑93 (MQ=255)
                                                          tataCGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATg                                   >  1:2190543/1‑93 (MQ=255)
                                                          tataCGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATg                                   >  2:1687013/1‑93 (MQ=255)
                                                            taCGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGtt                                 >  2:3539340/1‑93 (MQ=255)
                                                            taCGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGtt                                 <  1:4446386/93‑1 (MQ=255)
                                                             aCGGCGCGGTAATATCCATCGCATCAAGGTTGCTCTTCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGttt                                >  2:6778632/1‑93 (MQ=255)
                                                             aCGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGttt                                <  2:5718163/93‑1 (MQ=255)
                                                              cGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCTTAATGCCATGTTtc                               <  2:5183893/93‑1 (MQ=255)
                                                              cGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTtc                               <  2:1519259/93‑1 (MQ=255)
                                                              cGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTtc                               <  2:7233479/93‑1 (MQ=255)
                                                                gcgcGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTtcat                             <  2:3659504/93‑1 (MQ=255)
                                                                gcgcGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTtcat                             >  2:3121559/1‑93 (MQ=255)
                                                                 cgcgGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTtcatc                            <  1:4739305/93‑1 (MQ=255)
                                                                  gcgGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTtcatca                           <  1:1277176/93‑1 (MQ=255)
                                                                   cgGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAg                          <  2:104543/93‑1 (MQ=255)
                                                                     gTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGa                        <  1:56943/93‑1 (MQ=255)
                                                                     gTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGa                        <  1:2034617/93‑1 (MQ=255)
                                                                      tAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAt                       <  2:181536/93‑1 (MQ=255)
                                                                      tAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAt                       >  2:4292656/1‑93 (MQ=255)
                                                                       aaTATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAtt                      >  2:4863995/1‑93 (MQ=255)
                                                                       aaTATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAtt                      >  2:5146720/1‑93 (MQ=255)
                                                                        atatCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAttt                     <  1:2654157/93‑1 (MQ=255)
                                                                        atatCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAttt                     >  1:382198/1‑93 (MQ=255)
                                                                         tatCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAtttt                    >  2:1130961/1‑93 (MQ=255)
                                                                          atCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTc                   >  2:4303102/1‑93 (MQ=255)
                                                                           tCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTcc                  <  1:813687/93‑1 (MQ=255)
                                                                           tCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTcc                  <  1:7297138/93‑1 (MQ=255)
                                                                             cATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCgg                <  1:3034644/93‑1 (MQ=255)
                                                                               tCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGc              >  1:6799868/1‑93 (MQ=255)
                                                                                 gCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCg            >  1:4582198/1‑93 (MQ=255)
                                                                                 gCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCg            >  1:6589718/1‑93 (MQ=255)
                                                                                 gCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCg            >  2:3423526/1‑93 (MQ=255)
                                                                                  cATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGt           <  2:851653/93‑1 (MQ=255)
                                                                                  cATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGt           >  2:3236298/1‑93 (MQ=255)
                                                                                  cATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGt           <  1:1514421/93‑1 (MQ=255)
                                                                                   aTCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTg          <  1:3280119/93‑1 (MQ=255)
                                                                                    tCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGtnn         >  2:1896725/1‑91 (MQ=255)
                                                                                    tCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTgg         >  1:3941964/1‑93 (MQ=255)
                                                                                    tCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGTCATGTTTCATCAGGATTTTCCGGGCCGTgg         >  2:4358437/1‑93 (MQ=255)
                                                                                     cAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGa        <  2:648387/93‑1 (MQ=255)
                                                                                      aaGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGAt       <  2:4230243/93‑1 (MQ=255)
                                                                                      aaGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGAt       <  2:2908273/93‑1 (MQ=255)
                                                                                      aaGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGAt       <  2:2274448/93‑1 (MQ=255)
                                                                                       aGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATg      >  1:1932449/1‑93 (MQ=255)
                                                                                        ggTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGa     <  1:1166066/93‑1 (MQ=255)
                                                                                        ggTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGa     >  2:7495841/1‑93 (MQ=255)
                                                                                         gTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGaa    >  1:6871873/1‑93 (MQ=255)
                                                                                         gTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGaa    <  1:5490251/93‑1 (MQ=255)
                                                                                           tACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGaaaa  >  1:4950389/1‑93 (MQ=255)
                                                                                            |                                                                                           
CTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAA  >  NC_000913/3866491‑3866674

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAAC  >  NC_000913/3866490‑3866675
                                                                                             |                                                                                            
CCTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTG                                                                                              >  SRR4302542.786237/1‑94 (MQ=60)
CCTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTG                                                                                              <  SRR4302542.3089044/94‑1 (MQ=60)
CCTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTG                                                                                              <  SRR4302542.3850551/94‑1 (MQ=60)
CCTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTG                                                                                              >  SRR4302542.7093213/1‑94 (MQ=60)
CCTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTA                                                                                              >  SRR4302542.4086906/1‑94 (MQ=60)
 CTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGC                                                                                             >  SRR4302542.2625006/1‑94 (MQ=60)
 CTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGC                                                                                             >  SRR4302542.754318/1‑94 (MQ=60)
 CTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGC                                                                                             <  SRR4302542.1671123/94‑1 (MQ=60)
 CTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGC                                                                                             >  SRR4302542.1399036/1‑94 (MQ=60)
 CTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGC                                                                                             >  SRR4302542.3743993/1‑94 (MQ=60)
 CTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTAC                                                                                             <  SRR4302542.6630237/94‑1 (MQ=60)
  TTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCT                                                                                            <  SRR4302542.6093366/94‑1 (MQ=60)
  TTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCT                                                                                            <  SRR4302542.544704/94‑1 (MQ=60)
  TTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCT                                                                                            <  SRR4302542.4957398/94‑1 (MQ=60)
  TTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCT                                                                                            <  SRR4302542.3828855/94‑1 (MQ=60)
  TTTCACCGTTCGGGATAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCT                                                                                            <  SRR4302542.4884411/94‑1 (MQ=60)
   TTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTC                                                                                           <  SRR4302542.3028844/94‑1 (MQ=60)
    TCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCA                                                                                          >  SRR4302542.1318837/1‑94 (MQ=60)
      ACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATC                                                                                        >  SRR4302542.1082114/1‑94 (MQ=60)
       CCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCT                                                                                       <  SRR4302542.447865/94‑1 (MQ=60)
       CCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCT                                                                                       >  SRR4302542.899028/1‑94 (MQ=60)
       CCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCT                                                                                       >  SRR4302542.2216632/1‑94 (MQ=60)
        cggggggaaaAAAGACACGCACAGGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTT                                                                                      <  SRR4302542.4162798/84‑1 (MQ=60)
        CGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTT                                                                                      <  SRR4302542.3826336/94‑1 (MQ=60)
        CGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTT                                                                                      >  SRR4302542.1405973/1‑94 (MQ=60)
        CGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTT                                                                                      <  SRR4302542.4341439/94‑1 (MQ=60)
        CGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTT                                                                                      >  SRR4302542.3088917/1‑94 (MQ=60)
        CGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTT                                                                                      >  SRR4302542.2966141/1‑94 (MQ=60)
        CGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTT                                                                                      >  SRR4302542.5945168/1‑94 (MQ=60)
        CGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTT                                                                                      <  SRR4302542.1016535/94‑1 (MQ=60)
         GTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTG                                                                                     <  SRR4302542.4955585/94‑1 (MQ=60)
         GTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTG                                                                                     >  SRR4302542.6651666/1‑94 (MQ=60)
           TCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCC                                                                                   <  SRR4302542.7182979/94‑1 (MQ=60)
            CGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCG                                                                                  <  SRR4302542.6815354/94‑1 (MQ=60)
            CGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCG                                                                                  >  SRR4302542.735207/1‑94 (MQ=60)
            CGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCG                                                                                  >  SRR4302542.4837820/1‑94 (MQ=60)
               GCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCT                                                                               >  SRR4302542.3258047/1‑94 (MQ=60)
               GCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCT                                                                               >  SRR4302542.5165006/1‑94 (MQ=60)
               GCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCT                                                                               >  SRR4302542.2006030/1‑94 (MQ=60)
                CTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTT                                                                              >  SRR4302542.222012/1‑94 (MQ=60)
                CTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTT                                                                              >  SRR4302542.51125/1‑94 (MQ=60)
                CTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTT                                                                              <  SRR4302542.5125270/94‑1 (MQ=60)
                CTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTT                                                                              >  SRR4302542.4507750/1‑94 (MQ=60)
                  AAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCA                                                                            <  SRR4302542.7497701/94‑1 (MQ=60)
                   AAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAA                                                                           <  SRR4302542.135376/94‑1 (MQ=60)
                     GACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACA                                                                         <  SRR4302542.2066187/94‑1 (MQ=60)
                     GACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACA                                                                         <  SRR4302542.6318117/94‑1 (MQ=60)
                      ACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAA                                                                        >  SRR4302542.70603/1‑94 (MQ=60)
                       CATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAAT                                                                       <  SRR4302542.3481757/94‑1 (MQ=60)
                       CATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAAT                                                                       >  SRR4302542.1816085/1‑94 (MQ=60)
                       CATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAAT                                                                       <  SRR4302542.4374631/94‑1 (MQ=60)
                        ATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATC                                                                      >  SRR4302542.4616987/1‑94 (MQ=60)
                        ATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATC                                                                      >  SRR4302542.7444032/1‑94 (MQ=60)
                        ATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATC                                                                      >  SRR4302542.652300/1‑94 (MQ=60)
                             CATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCC                                                                 <  SRR4302542.3850407/94‑1 (MQ=60)
                              ATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCG                                                                <  SRR4302542.5760752/94‑1 (MQ=60)
                              ATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCG                                                                <  SRR4302542.6050648/94‑1 (MQ=60)
                              ATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCG                                                                >  SRR4302542.4026861/1‑94 (MQ=60)
                                   TGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCG                                                           <  SRR4302542.5855318/94‑1 (MQ=60)
                                   TGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCG                                                           <  SRR4302542.1652887/94‑1 (MQ=60)
                                    GCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGA                                                          >  SRR4302542.5578971/1‑94 (MQ=60)
                                     CCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGAT                                                         <  SRR4302542.2946817/94‑1 (MQ=60)
                                     CCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGAT                                                         <  SRR4302542.5993376/94‑1 (MQ=60)
                                      CGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATG                                                        >  SRR4302542.6161815/1‑94 (MQ=60)
                                      CGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATG                                                        >  SRR4302542.5368151/1‑94 (MQ=60)
                                      CGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATG                                                        <  SRR4302542.4658187/94‑1 (MQ=60)
                                      CGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATG                                                        <  SRR4302542.5583446/94‑1 (MQ=60)
                                      CGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATG                                                        >  SRR4302542.6429749/1‑94 (MQ=60)
                                        CCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGAT                                                      <  SRR4302542.5230208/94‑1 (MQ=60)
                                        CCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGAT                                                      <  SRR4302542.2297940/94‑1 (MQ=60)
                                         CGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATG                                                     <  SRR4302542.5759255/94‑1 (MQ=60)
                                         CGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATG                                                     <  SRR4302542.6910608/94‑1 (MQ=60)
                                         CGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATG                                                     >  SRR4302542.5941740/1‑94 (MQ=60)
                                          GCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGG                                                    <  SRR4302542.5746315/94‑1 (MQ=60)
                                          GCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGG                                                    >  SRR4302542.362063/1‑94 (MQ=60)
                                           CGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGA                                                   >  SRR4302542.1049107/1‑94 (MQ=60)
                                            GCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAA                                                  >  SRR4302542.4702461/1‑94 (MQ=60)
                                            GCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAA                                                  <  SRR4302542.3565482/94‑1 (MQ=60)
                                            GCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAA                                                  >  SRR4302542.4181944/1‑94 (MQ=60)
                                            GCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAA                                                  <  SRR4302542.4153146/94‑1 (MQ=60)
                                            GCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAA                                                  <  SRR4302542.393806/94‑1 (MQ=60)
                                             CAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAG                                                 <  SRR4302542.2936976/94‑1 (MQ=60)
                                             CAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAG                                                 <  SRR4302542.2720329/94‑1 (MQ=60)
                                              AGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGT                                                <  SRR4302542.1656729/94‑1 (MQ=60)
                                              AGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGT                                                <  SRR4302542.5789966/94‑1 (MQ=60)
                                               GCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTC                                               >  SRR4302542.4120767/1‑94 (MQ=60)
                                               GCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTC                                               <  SRR4302542.6580473/94‑1 (MQ=60)
                                                CACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCG                                              <  SRR4302542.6371541/94‑1 (MQ=60)
                                                CACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCG                                              <  SRR4302542.4366492/94‑1 (MQ=60)
                                                 ACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGT                                             >  SRR4302542.3605637/1‑94 (MQ=60)
                                                    CCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAAT                                          <  SRR4302542.3048376/94‑1 (MQ=60)
                                                    CCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAAT                                          <  SRR4302542.2258264/94‑1 (MQ=60)
                                                     CTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATG                                         <  SRR4302542.97918/94‑1 (MQ=60)
                                                     CTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATG                                         >  SRR4302542.4209906/1‑94 (MQ=60)
                                                     CTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATG                                         <  SRR4302542.6321059/94‑1 (MQ=60)
                                                     CTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATG                                         >  SRR4302542.4128002/1‑94 (MQ=60)
                                                      TGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGC                                        >  SRR4302542.253015/1‑94 (MQ=60)
                                                       GGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCC                                       >  SRR4302542.6182939/1‑94 (MQ=60)
                                                       GGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCC                                       >  SRR4302542.1254461/1‑94 (MQ=60)
                                                        GCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCA                                      <  SRR4302542.5173183/94‑1 (MQ=60)
                                                         CGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCAT                                     >  SRR4302542.3103183/1‑94 (MQ=60)
                                                          GTATACGGCGCGGTAATATCCATCGCATCAAGGTTGTTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATG                                    >  SRR4302542.4850169/1‑94 (MQ=60)
                                                          GTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATG                                    >  SRR4302542.2209406/1‑94 (MQ=60)
                                                          GTATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATG                                    >  SRR4302542.6877140/1‑94 (MQ=60)
                                                          GTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATG                                    <  SRR4302542.2862564/94‑1 (MQ=60)
                                                           TATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGT                                   >  SRR4302542.2984471/1‑94 (MQ=60)
                                                           TATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGT                                   >  SRR4302542.6849036/1‑94 (MQ=60)
                                                           TATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGT                                   >  SRR4302542.3356410/1‑94 (MQ=60)
                                                            ATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTT                                  <  SRR4302542.4355240/94‑1 (MQ=60)
                                                            ATACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTT                                  >  SRR4302542.4840111/1‑94 (MQ=60)
                                                             TACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTT                                 >  SRR4302542.6240204/1‑94 (MQ=60)
                                                             TACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTT                                 <  SRR4302542.3769080/94‑1 (MQ=60)
                                                             TACGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTT                                 <  SRR4302542.4490004/94‑1 (MQ=60)
                                                               CGGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCA                               <  SRR4302542.2345938/94‑1 (MQ=60)
                                                                GGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCAT                              <  SRR4302542.4965677/94‑1 (MQ=60)
                                                                GGCGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCAT                              >  SRR4302542.257682/1‑94 (MQ=60)
                                                                  CGCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCA                            <  SRR4302542.4785515/94‑1 (MQ=60)
                                                                   GCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAG                           <  SRR4302542.1288142/94‑1 (MQ=60)
                                                                   GCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAG                           <  SRR4302542.5198964/94‑1 (MQ=60)
                                                                   GCGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAG                           <  SRR4302542.3396005/94‑1 (MQ=60)
                                                                    CGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGG                          <  SRR4302542.422419/94‑1 (MQ=60)
                                                                    CGGTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCAATGTTTCATCAGG                          >  SRR4302542.2338851/1‑94 (MQ=60)
                                                                      GTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAT                        >  SRR4302542.602590/1‑94 (MQ=60)
                                                                      GTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAT                        <  SRR4302542.2052211/94‑1 (MQ=60)
                                                                      GTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAT                        <  SRR4302542.57406/94‑1 (MQ=60)
                                                                      GTAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGAT                        >  SRR4302542.4060843/1‑94 (MQ=60)
                                                                       TAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATT                       <  SRR4302542.1367116/94‑1 (MQ=60)
                                                                       TAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATT                       >  SRR4302542.932601/1‑94 (MQ=60)
                                                                       TAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATT                       >  SRR4302542.1318359/1‑94 (MQ=60)
                                                                       TAATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATT                       >  SRR4302542.420456/1‑94 (MQ=60)
                                                                        AATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTT                      >  SRR4302542.385522/1‑94 (MQ=60)
                                                                        AATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTT                      >  SRR4302542.624595/1‑94 (MQ=60)
                                                                         ATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTT                     >  SRR4302542.2206341/1‑94 (MQ=60)
                                                                         ATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTT                     >  SRR4302542.623877/1‑94 (MQ=60)
                                                                         ATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTT                     <  SRR4302542.2679791/94‑1 (MQ=60)
                                                                         ATATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTT                     <  SRR4302542.1691929/94‑1 (MQ=60)
                                                                         ATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTT                     <  SRR4302542.3089224/94‑1 (MQ=60)
                                                                           ATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCC                   >  SRR4302542.5078779/1‑94 (MQ=60)
                                                                           ATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCC                   <  SRR4302542.5766226/94‑1 (MQ=60)
                                                                           ATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCC                   <  SRR4302542.3560851/94‑1 (MQ=60)
                                                                           ATCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCC                   <  SRR4302542.5289569/94‑1 (MQ=60)
                                                                            TCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCG                  <  SRR4302542.820730/94‑1 (MQ=60)
                                                                            TCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCG                  <  SRR4302542.3844873/94‑1 (MQ=60)
                                                                            TCCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCG                  <  SRR4302542.7368647/94‑1 (MQ=60)
                                                                             CCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGG                 >  SRR4302542.262098/1‑94 (MQ=60)
                                                                             CCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGG                 <  SRR4302542.3973622/94‑1 (MQ=60)
                                                                             CCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGG                 <  SRR4302542.4193613/94‑1 (MQ=60)
                                                                             CCATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGG                 >  SRR4302542.1594987/1‑94 (MQ=60)
                                                                              CATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCGCTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGG                <  SRR4302542.6884201/94‑1 (MQ=60)
                                                                              CATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGG                <  SRR4302542.7239972/94‑1 (MQ=60)
                                                                              CATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGG                >  SRR4302542.1648890/1‑94 (MQ=60)
                                                                              CATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGG                <  SRR4302542.3063595/94‑1 (MQ=60)
                                                                              CATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGG                <  SRR4302542.4307302/94‑1 (MQ=60)
                                                                               ATCGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGC               >  SRR4302542.3628351/1‑94 (MQ=60)
                                                                               ATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGC               >  SRR4302542.6866730/1‑94 (MQ=60)
                                                                                 CGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCG             >  SRR4302542.4627029/1‑94 (MQ=60)
                                                                                 CGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCG             >  SRR4302542.6654651/1‑94 (MQ=60)
                                                                                 CGCATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCG             <  SRR4302542.5601911/94‑1 (MQ=60)
                                                                                   CATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTG           <  SRR4302542.1527504/94‑1 (MQ=60)
                                                                                   CATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTG           <  SRR4302542.1276934/94‑1 (MQ=60)
                                                                                   CATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTG           >  SRR4302542.5574582/1‑94 (MQ=60)
                                                                                    ATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGG          >  SRR4302542.3980902/1‑94 (MQ=60)
                                                                                    ATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGG          >  SRR4302542.4524133/1‑94 (MQ=60)
                                                                                    ATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGG          >  SRR4302542.2829776/1‑94 (MQ=60)
                                                                                    ATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGG          <  SRR4302542.3311064/94‑1 (MQ=60)
                                                                                    ATCAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGG          <  SRR4302542.313265/94‑1 (MQ=60)
                                                                                    ATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGG          >  SRR4302542.6942446/1‑94 (MQ=60)
                                                                                    ATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGG          >  SRR4302542.6510330/1‑94 (MQ=60)
                                                                                      CAAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGAT        <  SRR4302542.441214/94‑1 (MQ=60)
                                                                                       AAGGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATG       >  SRR4302542.1949140/1‑94 (MQ=60)
                                                                                       AAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATG       <  SRR4302542.2046034/94‑1 (MQ=60)
                                                                                         GGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAA     >  SRR4302542.6939383/1‑94 (MQ=60)
                                                                                         GGTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAA     <  SRR4302542.1176112/94‑1 (MQ=60)
                                                                                          GTTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAA    <  SRR4302542.5543587/94‑1 (MQ=60)
                                                                                           TTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAA   >  SRR4302542.2515603/1‑94 (MQ=60)
                                                                                           TTGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAA   <  SRR4302542.5779858/94‑1 (MQ=60)
                                                                                           TTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAA   >  SRR4302542.4998482/1‑94 (MQ=60)
                                                                                            TGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAAC  >  SRR4302542.4738068/1‑94 (MQ=60)
                                                                                            TGCTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAAC  <  SRR4302542.4579464/94‑1 (MQ=60)
                                                                                             |                                                                                            
CCTTTCACCGTTCGGGCTAAAGACATGCACATGGCTGCCGCCGCGCAGCACTCCTGGCGTATACGGCGCGGTAATATCCATCGCATCAAGGTTACTCATCTTGCCGCCTTCAACAATCACTCCGCGCCGATGATGGAAGTCGTAATGCCATGTTTCATCAGGATTTTCCGGGCCGTGGATGAAAAC  >  NC_000913/3866490‑3866675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑