Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,895,750	T→C	C34R (TGT→CGT)	yieJ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,895,750	0	T	C	85.0%	737.7 / 121.8	315	C34R (TGT→CGT)	yieJ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (22/25); new base C (138/129); total (160/155)
Fisher's exact test for biased strand distribution p-value = 6.35e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.74e-01

Only 100 of 320 total aligned reads displayed.

AATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGT  >  NC_000913/3895660‑3895839

aaTATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCcgt                                                                                         >  1:208961/1‑93 (MQ=255)

aaTATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCcgt                                                                                         >  1:4085587/1‑93 (MQ=255)

aaTATCAGGCCGTTACCCCAATTCAAATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCcgt                                                                                         <  1:491861/93‑1 (MQ=255)

  tatCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGa                                                                                       >  1:158218/1‑93 (MQ=255)

   atCAGGCCGTTCCCCAAATTAAAATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGaa                                                                                      <  1:1636940/93‑1 (MQ=255)

   atCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGaa                                                                                      >  2:6595550/1‑93 (MQ=255)

   atCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGaa                                                                                      <  1:393984/93‑1 (MQ=255)

    tCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGaac                                                                                     <  1:6563818/93‑1 (MQ=255)

        gCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAacaaca                                                                                 <  2:7283990/93‑1 (MQ=255)

         ccGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAg                                                                                <  2:2960639/93‑1 (MQ=255)

          cGTTACCCCAATTCAAATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGa                                                                               <  1:1434/93‑1 (MQ=255)

           gTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGAc                                                                              >  1:5450806/1‑93 (MQ=255)

           gTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGAc                                                                              >  2:742185/1‑93 (MQ=255)

            ttACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACg                                                                             >  2:1930644/1‑93 (MQ=255)

            ttACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACg                                                                             <  1:6348891/93‑1 (MQ=255)

               ccccAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCa                                                                          >  1:2450920/1‑93 (MQ=255)

               ccccAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCa                                                                          >  2:3225566/1‑93 (MQ=255)

               ccccAATTAAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCa                                                                          <  1:5649149/93‑1 (MQ=255)

                cccAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAg                                                                         >  1:5311404/1‑93 (MQ=255)

                cccAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAg                                                                         >  1:6636422/1‑93 (MQ=255)

                cccAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAg                                                                         >  1:7179564/1‑93 (MQ=255)

                 ccAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGt                                                                        >  2:2724000/1‑93 (MQ=255)

                    aTTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTtta                                                                     <  1:3195669/93‑1 (MQ=255)

                    aTTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTtta                                                                     <  2:2779559/93‑1 (MQ=255)

                    aTTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTtta                                                                     >  1:2157573/1‑93 (MQ=255)

                    aTTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAAC‑ACAGACGTCAGTttat                                                                    <  2:3906180/93‑1 (MQ=255)

                      tCAAATATCATGCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTttatt                                                                   >  2:4653147/1‑93 (MQ=255)

                      tCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTttatt                                                                   <  1:2947419/93‑1 (MQ=255)

                       cAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTttatta                                                                  <  1:6161381/93‑1 (MQ=255)

                       cAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTttatta                                                                  <  1:5939898/93‑1 (MQ=255)

                        aaaTATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTAc                                                                 <  2:7455237/93‑1 (MQ=255)

                         aaTATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACt                                                                >  2:5806091/1‑93 (MQ=255)

                         aaTATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACt                                                                >  2:3792538/1‑93 (MQ=255)

                           tatCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCg                                                              >  2:4720511/1‑93 (MQ=255)

                           tatCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCg                                                              <  2:6746753/93‑1 (MQ=255)

                           tatCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCg                                                              >  2:6873188/1‑93 (MQ=255)

                            atcatcCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCgg                                                             <  1:6496219/93‑1 (MQ=255)

                            atcatcCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCgg                                                             <  1:447937/93‑1 (MQ=255)

                            atcatcCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCgg                                                             <  2:5927054/93‑1 (MQ=255)

                               atcCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTc                                                          >  2:2601990/1‑93 (MQ=255)

                                ccccAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTcc                                                         <  1:2791047/92‑1 (MQ=255)

                                   cAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCtt                                                      >  2:4427992/1‑93 (MQ=255)

                                    aaGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCttt                                                     >  2:5508290/1‑93 (MQ=255)

                                    aaGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCttt                                                     <  2:4532177/93‑1 (MQ=255)

                                    aaGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCttt                                                     >  2:2235083/1‑93 (MQ=255)

                                      gCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTa                                                   >  2:4506244/1‑93 (MQ=255)

                                      gCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTa                                                   >  2:125893/1‑93 (MQ=255)

                                       ccACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTAt                                                  >  1:3499707/1‑93 (MQ=255)

                                       ccACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTAt                                                  <  2:1751985/93‑1 (MQ=255)

                                       ccACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTAt                                                  <  2:4927900/93‑1 (MQ=255)

                                        cACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTAtt                                                 <  1:1127483/93‑1 (MQ=255)

                                           tGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCg                                              >  2:4004057/1‑93 (MQ=255)

                                           tGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCg                                              >  2:1376449/1‑93 (MQ=255)

                                            ggAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGt                                             >  1:7365912/1‑93 (MQ=255)

                                             gAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGtt                                            <  2:1810310/93‑1 (MQ=255)

                                               aaCAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTtga                                          >  1:2697705/1‑93 (MQ=255)

                                                 cAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTtgatg                                        <  1:5855217/93‑1 (MQ=255)

                                                  aGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTtgatga                                       >  2:5404935/1‑93 (MQ=255)

                                                     cgcATTTGAACAGGATAAAACCGTAGAGTGCGATTGGCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGt                                    <  1:3423019/93‑1 (MQ=255)

                                                      gcATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGtt                                   >  2:2552003/1‑93 (MQ=255)

                                                      gcATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGtt                                   <  1:1990976/93‑1 (MQ=255)

                                                       cATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTg                                  >  2:6644491/1‑93 (MQ=255)

                                                       cATTTGAACAGGATAAAACCGTAGAGTGCAATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTg                                  >  1:6040701/1‑93 (MQ=255)

                                                         tttGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGaa                                >  1:67117/1‑93 (MQ=255)

                                                         tttGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGaa                                <  1:2267292/93‑1 (MQ=255)

                                                         tttGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGaa                                >  1:937107/1‑93 (MQ=255)

                                                         tttGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGaa                                >  2:3747516/1‑93 (MQ=255)

                                                          ttGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAAc                               <  1:3754603/93‑1 (MQ=255)

                                                          ttGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAAc                               <  2:5331096/93‑1 (MQ=255)

                                                            gAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTCCGTTGATGAAGTTGAACAt                             >  1:419827/1‑93 (MQ=255)

                                                             aaCAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACAtc                            >  1:7008115/1‑93 (MQ=255)

                                                              aCAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACAtct                           >  2:896504/1‑93 (MQ=255)

                                                               cAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACAtctc                          <  2:3465810/93‑1 (MQ=255)

                                                               cAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACAtctc                          <  2:6289047/93‑1 (MQ=255)

                                                               cAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACAtctc                          <  1:5769645/93‑1 (MQ=255)

                                                                aGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATctct                         <  1:5115443/93‑1 (MQ=255)

                                                                   aTAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTc                      <  1:3621028/93‑1 (MQ=255)

                                                                    tAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTcc                     <  1:978467/93‑1 (MQ=255)

                                                                     aaaaCCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCg                    <  2:6789942/93‑1 (MQ=255)

                                                                      aaaCCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCgt                   >  1:4660743/1‑93 (MQ=255)

                                                                      aaaCCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCgt                   >  2:1571889/1‑93 (MQ=255)

                                                                       aaCCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCgtg                  <  1:4284629/93‑1 (MQ=255)

                                                                        aCCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCgtgg                 <  2:3398178/93‑1 (MQ=255)

                                                                         ccGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCgtggt                <  1:5646000/93‑1 (MQ=255)

                                                                          cGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCgtggtg               >  2:5203101/1‑93 (MQ=255)

                                                                           gTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGgtgt              >  2:5991134/1‑93 (MQ=255)

                                                                           gTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGgtgt              >  1:5975665/1‑93 (MQ=255)

                                                                           gTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGgtgt              <  1:2212895/93‑1 (MQ=255)

                                                                            tAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTa             >  2:7089976/1‑93 (MQ=255)

                                                                            tAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTa             <  2:417418/93‑1 (MQ=255)

                                                                            tAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTa             <  2:2051405/93‑1 (MQ=255)

                                                                            tAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTa             <  1:4562316/93‑1 (MQ=255)

                                                                             agagTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTAt            <  1:17708/93‑1 (MQ=255)

                                                                              gagTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTAtt           >  2:6123308/1‑93 (MQ=255)

                                                                              gagTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCC‑TGGTGGATTg          >  2:4981643/1‑93 (MQ=255)

                                                                                gTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGc         >  2:1087047/1‑93 (MQ=255)

                                                                                 tGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCg        >  1:5037448/1‑93 (MQ=255)

                                                                                 tGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCg        >  2:5611164/1‑93 (MQ=255)

                                                                                      ttGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACgg   <  1:3679681/93‑1 (MQ=255)

                                                                                       tGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGt  <  2:1334800/93‑1 (MQ=255)

AATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGT  >  NC_000913/3895660‑3895839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CAAAATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGTTCTG  >  NC_000913/3895657‑3895843

CAAAATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCC                                                                                               >  SRR4302542.2645540/1‑94 (MQ=60)

 AAAATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCG                                                                                              <  SRR4302542.561015/94‑1 (MQ=60)

 AAAATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCG                                                                                              <  SRR4302542.1962784/94‑1 (MQ=60)

  AAATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGT                                                                                             >  SRR4302542.210760/1‑94 (MQ=60)

  AAATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGT                                                                                             >  SRR4302542.1992234/1‑94 (MQ=60)

  AAATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGT                                                                                             >  SRR4302542.4125847/1‑94 (MQ=60)

   AATATCAGGCCGTTACCCCAATTCAAATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTG                                                                                            <  SRR4302542.496104/94‑1 (MQ=60)

    ATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGA                                                                                           >  SRR4302542.159563/1‑94 (MQ=60)

    ATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGA                                                                                           >  SRR4302542.6053181/1‑94 (MQ=60)

      ATCAGGCCGTTCCCCAAATTAAAATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAAC                                                                                         <  SRR4302542.1651092/94‑1 (MQ=60)

      ATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAAC                                                                                         >  SRR4302542.6978067/1‑94 (MQ=60)

      ATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAAC                                                                                         <  SRR4302542.397392/94‑1 (MQ=60)

       TCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACA                                                                                        <  SRR4302542.6628505/94‑1 (MQ=60)

        CAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAA                                                                                       >  SRR4302542.4483703/1‑94 (MQ=60)

          GGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACA                                                                                     <  SRR4302542.4620392/94‑1 (MQ=60)

          GGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACA                                                                                     <  SRR4302542.4605750/94‑1 (MQ=60)

          GGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACA                                                                                     >  SRR4302542.6559506/1‑94 (MQ=60)

          GGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACA                                                                                     <  SRR4302542.3443652/94‑1 (MQ=60)

             CGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGAC                                                                                  >  SRR4302542.2795206/1‑94 (MQ=60)

             CGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGAC                                                                                  >  SRR4302542.4165782/1‑94 (MQ=60)

             CGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGAC                                                                                  >  SRR4302542.7114450/1‑94 (MQ=60)

             CGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGAC                                                                                  >  SRR4302542.5177869/1‑94 (MQ=60)

             CGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGAC                                                                                  >  SRR4302542.5503760/1‑94 (MQ=60)

             CGTTACCCCAATTCAAATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGAC                                                                                  <  SRR4302542.418680/94‑1 (MQ=60)

             CGTTACCCCAATTCAAATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGAC                                                                                  <  SRR4302542.1443/94‑1 (MQ=60)

              GTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACG                                                                                 <  SRR4302542.4542050/94‑1 (MQ=60)

              GTTACCCCAATTCAAATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACG                                                                                 <  SRR4302542.706690/94‑1 (MQ=60)

               TTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGT                                                                                <  SRR4302542.6411437/94‑1 (MQ=60)

               TTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGT                                                                                <  SRR4302542.6134177/94‑1 (MQ=60)

               TTACCCCAATTCAAATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGT                                                                                <  SRR4302542.664506/94‑1 (MQ=60)

                TACCCCAATTCAAATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTC                                                                               <  SRR4302542.233208/94‑1 (MQ=60)

                 CCCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCA                                                                              <  SRR4302542.3108193/94‑1 (MQ=60)

                 ACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCA                                                                              >  SRR4302542.2239313/1‑94 (MQ=60)

                 ACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCA                                                                              >  SRR4302542.2474757/1‑94 (MQ=60)

                  CCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAG                                                                             >  SRR4302542.3619020/1‑94 (MQ=60)

                  CCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAG                                                                             >  SRR4302542.7249982/1‑94 (MQ=60)

                  CCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAG                                                                             >  SRR4302542.6701837/1‑94 (MQ=60)

                  CCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAG                                                                             >  SRR4302542.5363003/1‑94 (MQ=60)

                  CCCCAATTAAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAG                                                                             <  SRR4302542.5704002/94‑1 (MQ=60)

                    CCAATTCAAATATCATTCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTT                                                                           >  SRR4302542.5297337/1‑94 (MQ=60)

                     CAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTT                                                                          >  SRR4302542.7298986/1‑94 (MQ=60)

                     CAATTCAAATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTT                                                                          <  SRR4302542.65259/94‑1 (MQ=60)

                      AATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTA                                                                         >  SRR4302542.2176154/1‑94 (MQ=60)

                       ATTCAAATATCATCCCAAGCCACTGGAACCAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTAT                                                                        >  SRR4302542.5702876/1‑94 (MQ=60)

                       ATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTAT                                                                        <  SRR4302542.3225930/94‑1 (MQ=60)

                       ATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTAT                                                                        >  SRR4302542.5702877/1‑94 (MQ=60)

                       ATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTAT                                                                        <  SRR4302542.4244963/94‑1 (MQ=60)

                       ATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTAT                                                                        >  SRR4302542.5830968/1‑94 (MQ=60)

                       ATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTAT                                                                        >  SRR4302542.7051617/1‑94 (MQ=60)

                        TTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATT                                                                       >  SRR4302542.3915456/1‑94 (MQ=60)

                        TTCAAATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATT                                                                       <  SRR4302542.6398725/94‑1 (MQ=60)

                         TCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTA                                                                      <  SRR4302542.2975637/94‑1 (MQ=60)

                          CAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTAC                                                                     <  SRR4302542.5997441/94‑1 (MQ=60)

                          CAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTAC                                                                     <  SRR4302542.1186364/94‑1 (MQ=60)

                          CAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTAC                                                                     >  SRR4302542.2102854/1‑94 (MQ=60)

                          CAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTAC                                                                     <  SRR4302542.3523461/94‑1 (MQ=60)

                          CAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTAC                                                                     >  SRR4302542.3459438/1‑94 (MQ=60)

                          CAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTAC                                                                     <  SRR4302542.6221069/94‑1 (MQ=60)

                           AAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACT                                                                    <  SRR4302542.3342674/94‑1 (MQ=60)

                           AAATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACT                                                                    <  SRR4302542.1629448/94‑1 (MQ=60)

                            AATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTC                                                                   <  SRR4302542.2276399/94‑1 (MQ=60)

                            AATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTC                                                                   <  SRR4302542.372860/94‑1 (MQ=60)

                            AATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTC                                                                   <  SRR4302542.6766907/94‑1 (MQ=60)

                             ATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCG                                                                  >  SRR4302542.2555652/1‑94 (MQ=60)

                             ATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCG                                                                  <  SRR4302542.2033049/94‑1 (MQ=60)

                             ATATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCG                                                                  <  SRR4302542.1617273/94‑1 (MQ=60)

                              TATCACCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGG                                                                 <  SRR4302542.5772083/94‑1 (MQ=60)

                               ATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGG                                                                <  SRR4302542.6560236/94‑1 (MQ=60)

                               ATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGG                                                                <  SRR4302542.451811/94‑1 (MQ=60)

                               ATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGG                                                                >  SRR4302542.6350494/1‑94 (MQ=60)

                                  ATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCC                                                             >  SRR4302542.658644/1‑94 (MQ=60)

                                   CCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCC                                                            <  SRR4302542.2817912/94‑1 (MQ=60)

                                    CCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCT                                                           <  SRR4302542.6019903/94‑1 (MQ=60)

                                      CAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTT                                                         >  SRR4302542.5686731/1‑94 (MQ=60)

                                       AAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTT                                                        >  SRR4302542.4001170/1‑94 (MQ=60)

                                         GCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTAT                                                      >  SRR4302542.3532441/1‑94 (MQ=60)

                                         GCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTAT                                                      <  SRR4302542.6045019/94‑1 (MQ=60)

                                          CCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATT                                                     >  SRR4302542.5001793/1‑94 (MQ=60)

                                          CCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATT                                                     <  SRR4302542.5010216/94‑1 (MQ=60)

                                           CACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTG                                                    <  SRR4302542.1137107/94‑1 (MQ=60)

                                            ACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGC                                                   >  SRR4302542.1529635/1‑94 (MQ=60)

                                            ACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGC                                                   <  SRR4302542.2211144/94‑1 (MQ=60)

                                            ACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGC                                                   >  SRR4302542.1979730/1‑94 (MQ=60)

                                            ACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGC                                                   >  SRR4302542.3620899/1‑94 (MQ=60)

                                            ACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGC                                                   >  SRR4302542.1305002/1‑94 (MQ=60)

                                             CTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCG                                                  >  SRR4302542.585753/1‑94 (MQ=60)

                                              TGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGT                                                 >  SRR4302542.4450734/1‑94 (MQ=60)

                                              TGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGT                                                 >  SRR4302542.6707830/1‑94 (MQ=60)

                                              TGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGT                                                 >  SRR4302542.7438057/1‑94 (MQ=60)

                                               GGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTT                                                <  SRR4302542.4945698/94‑1 (MQ=60)

                                               GGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTT                                                >  SRR4302542.1774384/1‑94 (MQ=60)

                                                GAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTG                                               >  SRR4302542.6694873/1‑94 (MQ=60)

                                                 AAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGA                                              >  SRR4302542.2723722/1‑94 (MQ=60)

                                                 AAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGA                                              >  SRR4302542.5842198/1‑94 (MQ=60)

                                                  AACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGAT                                             >  SRR4302542.2361670/1‑94 (MQ=60)

                                                   ACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATG                                            <  SRR4302542.2653886/94‑1 (MQ=60)

                                                   ACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATG                                            >  SRR4302542.4672997/1‑94 (MQ=60)

                                                    CAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGA                                           <  SRR4302542.5912003/94‑1 (MQ=60)

                                                     AGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAA                                          >  SRR4302542.4317759/1‑94 (MQ=60)

                                                     AGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAA                                          >  SRR4302542.6622119/1‑94 (MQ=60)

                                                     AGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAA                                          <  SRR4302542.4547145/94‑1 (MQ=60)

                                                     AGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAA                                          >  SRR4302542.5395459/1‑94 (MQ=60)

                                                      GGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAG                                         <  SRR4302542.591431/94‑1 (MQ=60)

                                                      GGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAG                                         <  SRR4302542.6329216/94‑1 (MQ=60)

                                                      GGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAG                                         <  SRR4302542.5608932/94‑1 (MQ=60)

                                                       GCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGT                                        <  SRR4302542.600561/94‑1 (MQ=60)

                                                        CGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGGCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTT                                       <  SRR4302542.3455084/94‑1 (MQ=60)

                                                        CGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTT                                       <  SRR4302542.3967559/94‑1 (MQ=60)

                                                         GCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTG                                      <  SRR4302542.2008156/94‑1 (MQ=60)

                                                         GCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTG                                      <  SRR4302542.5163366/94‑1 (MQ=60)

                                                         GCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTG                                      <  SRR4302542.3777170/94‑1 (MQ=60)

                                                         GCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTG                                      <  SRR4302542.5354114/94‑1 (MQ=60)

                                                         GCATTTGAACAGGATAAAACCGTAGAGTGCAATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTG                                      >  SRR4302542.6099178/1‑94 (MQ=60)

                                                           ATTTGAACAGGATAAAACTGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAA                                    >  SRR4302542.7209257/1‑94 (MQ=60)

                                                           ATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAA                                    >  SRR4302542.945181/1‑94 (MQ=60)

                                                           ATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAA                                    >  SRR4302542.67684/1‑94 (MQ=60)

                                                           ATTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAA                                    >  SRR4302542.2369706/1‑94 (MQ=60)

                                                            TTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAAC                                   <  SRR4302542.2286802/94‑1 (MQ=60)

                                                            TTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAAC                                   <  SRR4302542.3802602/94‑1 (MQ=60)

                                                            TTTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAAC                                   <  SRR4302542.960315/94‑1 (MQ=60)

                                                             TTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACA                                  >  SRR4302542.2820025/1‑94 (MQ=60)

                                                             TTGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACA                                  <  SRR4302542.3791751/94‑1 (MQ=60)

                                                              TGAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTCCGTTGATGAAGTTGAACAT                                 >  SRR4302542.423443/1‑94 (MQ=60)

                                                               GAACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATC                                >  SRR4302542.7076955/1‑94 (MQ=60)

                                                                AACAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCT                               <  SRR4302542.5742602/94‑1 (MQ=60)

                                                                  CAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCT                             >  SRR4302542.41129/1‑94 (MQ=60)

                                                                  CAGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCT                             <  SRR4302542.5825656/94‑1 (MQ=60)

                                                                   AGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTG                            >  SRR4302542.4896045/1‑94 (MQ=60)

                                                                   AGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTG                            <  SRR4302542.5165124/94‑1 (MQ=60)

                                                                   AGGATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTG                            <  SRR4302542.945852/94‑1 (MQ=60)

                                                                    GGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGT                           <  SRR4302542.1894404/94‑1 (MQ=60)

                                                                      ATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCC                         >  SRR4302542.5096134/1‑94 (MQ=60)

                                                                      ATAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCC                         <  SRR4302542.3654760/94‑1 (MQ=60)

                                                                       TAAAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCG                        <  SRR4302542.986900/94‑1 (MQ=60)

                                                                        AAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGT                       >  SRR4302542.4706303/1‑94 (MQ=60)

                                                                         AAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTG                      <  SRR4302542.1693768/94‑1 (MQ=60)

                                                                         AAACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTG                      <  SRR4302542.1471361/94‑1 (MQ=60)

                                                                          AACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGG                     <  SRR4302542.4326772/94‑1 (MQ=60)

                                                                          AACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGG                     >  SRR4302542.2147954/1‑94 (MQ=60)

                                                                           ACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGT                    <  SRR4302542.2185529/94‑1 (MQ=60)

                                                                           ACCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGT                    >  SRR4302542.290519/1‑94 (MQ=60)

                                                                            CCGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTG                   <  SRR4302542.5700834/94‑1 (MQ=60)

                                                                             CGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGT                  >  SRR4302542.6133558/1‑94 (MQ=60)

                                                                             CGTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGT                  >  SRR4302542.6033497/1‑94 (MQ=60)

                                                                              GTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTA                 <  SRR4302542.2231937/94‑1 (MQ=60)

                                                                              GTAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTA                 >  SRR4302542.5918354/1‑94 (MQ=60)

                                                                               TAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTAT                <  SRR4302542.4606987/94‑1 (MQ=60)

                                                                               TAGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTAT                >  SRR4302542.3216888/1‑94 (MQ=60)

                                                                                AGAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATT               <  SRR4302542.17866/94‑1 (MQ=60)

                                                                                 GAGTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTG              <  SRR4302542.2800256/94‑1 (MQ=60)

                                                                                   GTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCG            >  SRR4302542.5086353/1‑94 (MQ=60)

                                                                                   GTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCG            >  SRR4302542.7325465/1‑94 (MQ=60)

                                                                                   GTGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCG            <  SRR4302542.3701380/94‑1 (MQ=60)

                                                                                    TGCGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGG           >  SRR4302542.2172040/1‑94 (MQ=60)

                                                                                    TGCGATTGCAGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGG           <  SRR4302542.5414506/94‑1 (MQ=60)

                                                                                      CGATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGAC         >  SRR4302542.830134/1‑94 (MQ=60)

                                                                                       GATTGCCGTGAACAACAGACGTCAGTTTATTTCTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACC        <  SRR4302542.3708484/94‑1 (MQ=60)

                                                                                       GATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACG        >  SRR4302542.3314324/1‑94 (MQ=60)

                                                                                        ATTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGG       >  SRR4302542.7481374/1‑94 (MQ=60)

                                                                                         TTGCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGT      <  SRR4302542.3715591/94‑1 (MQ=60)

                                                                                           GCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGTTC    >  SRR4302542.1093479/1‑94 (MQ=60)

                                                                                           GCCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGTTC    >  SRR4302542.6661388/1‑94 (MQ=60)

                                                                                            CCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGTTCT   <  SRR4302542.701051/94‑1 (MQ=60)

                                                                                            CCGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGTTCT   <  SRR4302542.5483412/94‑1 (MQ=60)

                                                                                             TGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGTTCTG  >  SRR4302542.5682253/1‑94 (MQ=60)

                                                                                             CGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGTTCTG  >  SRR4302542.1516788/1‑94 (MQ=60)

                                                                                             CGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGTTCTG  <  SRR4302542.1553874/94‑1 (MQ=60)

                                                                                             CGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGTTCTG  >  SRR4302542.5733992/1‑94 (MQ=60)

                                                                                             CGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGTTCTG  >  SRR4302542.5920146/1‑94 (MQ=60)

CAAAATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGTTCTG  >  NC_000913/3895657‑3895843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`