Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,911,433 A→G intergenic (‑137/+25) glmS ← / ← glmU L‑glutamine:D‑fructose‑6‑phosphate aminotransferase/N‑acetyl glucosamine‑1‑phosphate uridyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,911,4330AG84.2% 644.3 / 117.0 284intergenic (‑137/+25)glmS/glmUL‑glutamine:D‑fructose‑6‑phosphate aminotransferase/N‑acetyl glucosamine‑1‑phosphate uridyltransferase
Reads supporting (aligned to +/- strand):  ref base A (24/21);  new base G (122/117);  total (146/138)
Fisher's exact test for biased strand distribution p-value = 8.71e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.91e-02

Only 100 of 286 total aligned reads displayed.

GTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAAT  >  NC_000913/3911343‑3911524
                                                                                          |                                                                                           
gTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGtg                                                                                           >  2:3793796/1‑93 (MQ=255)
 ttttttCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCgtgt                                                                                          <  1:7317527/93‑1 (MQ=255)
 ttttttCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCAtgt                                                                                          >  2:4541531/1‑93 (MQ=255)
  tttttCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGtgtg                                                                                         >  2:6842217/1‑93 (MQ=255)
   ttttCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGa                                                                                        >  1:6587720/1‑93 (MQ=255)
     ttCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGAcc                                                                                      <  2:2642450/93‑1 (MQ=255)
      tCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCg                                                                                     >  2:7158363/1‑93 (MQ=255)
        gggCGCCCCGAGCCTTGTAGAGAGTGGAGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCggg                                                                                   <  1:4920345/93‑1 (MQ=255)
         ggCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGt                                                                                  <  1:2038059/93‑1 (MQ=255)
          gcgcCCCGAGCTTGGTAGAGATTGGGTTTATTTTTATAGTTACTGCTTGTGGGA‑GGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTa                                                                                <  2:1226204/93‑1 (MQ=255)
          gcgcCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGtt                                                                                 >  2:1841972/1‑93 (MQ=255)
           cgcCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTa                                                                                <  1:6939639/93‑1 (MQ=255)
           cgcCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTa                                                                                <  2:1419573/93‑1 (MQ=255)
            gcCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCACGTGACCGGGTTAg                                                                               >  1:3294739/1‑93 (MQ=255)
             ccccGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGc                                                                              <  2:2928525/93‑1 (MQ=255)
                 gAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGc                                                                          <  2:6829989/93‑1 (MQ=255)
                  aGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGcc                                                                         >  1:3922971/1‑93 (MQ=255)
                  aGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGcc                                                                         >  2:2734859/1‑93 (MQ=255)
                   gCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCa                                                                        >  1:4986883/1‑93 (MQ=255)
                   gCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCa                                                                        >  1:3747626/1‑93 (MQ=255)
                     cTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGa                                                                      <  2:4860784/93‑1 (MQ=255)
                      ttGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGaa                                                                     >  1:6995380/1‑93 (MQ=255)
                      ttGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGaa                                                                     >  1:152944/1‑93 (MQ=255)
                      ttGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGaa                                                                     >  1:71531/1‑93 (MQ=255)
                       tGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAAt                                                                    <  1:6236240/93‑1 (MQ=255)
                       tGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAAt                                                                    <  2:4258134/93‑1 (MQ=255)
                         tAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCa                                                                  <  2:3998500/93‑1 (MQ=255)
                         tAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCa                                                                  <  1:4363780/93‑1 (MQ=255)
                          agagagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCAc                                                                 <  1:2933166/93‑1 (MQ=255)
                           gagagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACt                                                                >  1:471068/1‑93 (MQ=255)
                            agagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACtt                                                               <  1:106783/93‑1 (MQ=255)
                             gagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACttt                                                              >  1:5820358/1‑93 (MQ=255)
                             gagTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACttt                                                              <  1:5419437/93‑1 (MQ=255)
                              agTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACtttt                                                             >  2:356344/1‑93 (MQ=255)
                              agTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACtttt                                                             >  1:2612821/1‑93 (MQ=255)
                              agTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACtttt                                                             <  1:3022930/93‑1 (MQ=255)
                                tGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTc                                                           <  2:4098386/93‑1 (MQ=255)
                                 ggggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCt                                                          >  1:1932354/1‑93 (MQ=255)
                                  gggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCtt                                                         >  1:3167335/1‑93 (MQ=255)
                                  gggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCtt                                                         <  1:646317/93‑1 (MQ=255)
                                  gggTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCtt                                                         <  2:119629/93‑1 (MQ=255)
                                     ttATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTAc                                                      <  2:3428538/93‑1 (MQ=255)
                                     ttATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTAc                                                      >  2:5795728/1‑93 (MQ=255)
                                      tATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTAcc                                                     >  2:7255260/1‑93 (MQ=255)
                                      tATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTAcc                                                     >  1:2799552/1‑93 (MQ=255)
                                       aTTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCg                                                    >  2:2224285/1‑93 (MQ=255)
                                         ttttATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGga                                                  >  2:6554195/1‑93 (MQ=255)
                                          tttATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgac                                                 <  2:1783015/93‑1 (MQ=255)
                                          tttATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgac                                                 <  1:5622602/93‑1 (MQ=255)
                                            tataGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCcgacga                                               <  2:4595527/93‑1 (MQ=255)
                                             ataGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgacgac                                              <  2:5579325/93‑1 (MQ=255)
                                             ataGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGgacgac                                              <  2:5161062/93‑1 (MQ=255)
                                              taGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGacgacg                                             >  2:4956366/1‑93 (MQ=255)
                                              taGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGacgacg                                             >  1:5081433/1‑93 (MQ=255)
                                               aGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGc                                            >  1:3444797/1‑93 (MQ=255)
                                                gTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGcc                                           <  2:6130971/93‑1 (MQ=255)
                                                gTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGcc                                           <  1:7035537/93‑1 (MQ=255)
                                                 ttACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCa                                          <  1:847374/93‑1 (MQ=255)
                                                 ttACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCa                                          >  1:6303189/1‑93 (MQ=255)
                                                   aCTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGc                                        <  1:444323/93‑1 (MQ=255)
                                                   aCTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGc                                        >  2:147581/1‑93 (MQ=255)
                                                    cTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGcc                                       <  2:1141288/93‑1 (MQ=255)
                                                     tGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCct                                      >  1:6351303/1‑93 (MQ=255)
                                                       cTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCcttc                                    <  1:2185725/93‑1 (MQ=255)
                                                       cTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCcttc                                    <  1:2458561/93‑1 (MQ=255)
                                                       cTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCcttc                                    <  1:6755076/93‑1 (MQ=255)
                                                        ttGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGTTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCcttct                                   >  2:6903596/1‑93 (MQ=255)
                                                         tgtgGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCcttctt                                  <  1:3112815/93‑1 (MQ=255)
                                                         tgtgGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCcttctt                                  <  2:2859874/93‑1 (MQ=255)
                                                          gtgGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttcttt                                 >  1:5229395/1‑93 (MQ=255)
                                                          gtgGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttcttt                                 >  2:6486288/1‑93 (MQ=255)
                                                           tgGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttctttc                                <  1:5034745/93‑1 (MQ=255)
                                                           tgGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttctttc                                <  1:1965263/93‑1 (MQ=255)
                                                            gggagggaGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCttctttct                               >  1:1153692/1‑93 (MQ=255)
                                                             ggagggagATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTg                              >  2:636427/1‑93 (MQ=255)
                                                                gggagATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGt                           >  2:5872282/1‑93 (MQ=255)
                                                                gggagATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGt                           >  1:7479799/1‑93 (MQ=255)
                                                                 ggagATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTc                          >  2:5675145/1‑93 (MQ=255)
                                                                 ggagATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTc                          >  2:5995624/1‑93 (MQ=255)
                                                                    gaTTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGc                       <  1:1497624/93‑1 (MQ=255)
                                                                    gaTTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGc                       >  1:6094187/1‑93 (MQ=255)
                                                                      ttATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCgg                     >  2:7494296/1‑93 (MQ=255)
                                                                      ttATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCgg                     >  2:4711614/1‑93 (MQ=255)
                                                                        aTGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGca                   <  1:364996/93‑1 (MQ=255)
                                                                         tGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGcac                  >  1:170895/1‑93 (MQ=255)
                                                                         tGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGcac                  >  2:5237186/1‑93 (MQ=255)
                                                                          gTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGcaca                 <  1:451849/93‑1 (MQ=255)
                                                                          gTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGcaca                 <  1:6842217/93‑1 (MQ=255)
                                                                           ttATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCacac                >  1:6126513/1‑93 (MQ=255)
                                                                           ttATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCacac                <  1:4023847/93‑1 (MQ=255)
                                                                           ttATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCacac                <  2:3268940/93‑1 (MQ=255)
                                                                           ttATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCacac                >  2:4317498/1‑93 (MQ=255)
                                                                            tATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACg               <  2:6707162/93‑1 (MQ=255)
                                                                                 cctcATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGa          >  1:7516107/1‑93 (MQ=255)
                                                                                 cctcATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGa          <  2:1359793/93‑1 (MQ=255)
                                                                                  ctcATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGAt         >  1:4083462/1‑93 (MQ=255)
                                                                                  ctcATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGAt         <  2:7311315/93‑1 (MQ=255)
                                                                                   tcATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATa        <  2:2503750/93‑1 (MQ=255)
                                                                                     aTCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGc      >  2:5558172/1‑93 (MQ=255)
                                                                                      tCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCt     <  1:5398681/93‑1 (MQ=255)
                                                                                          |                                                                                           
GTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAAT  >  NC_000913/3911343‑3911524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAATGC  >  NC_000913/3911340‑3911526
                                                                                             |                                                                                             
CCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCG                                                                                               >  SRR4302542.3138978/1‑94 (MQ=60)
CCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCA                                                                                               <  SRR4302542.797271/94‑1 (MQ=60)
 CCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGT                                                                                              >  SRR4302542.215234/1‑94 (MQ=60)
 CCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGT                                                                                              >  SRR4302542.3308194/1‑94 (MQ=60)
  CGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTG                                                                                             >  SRR4302542.6922164/1‑94 (MQ=60)
   GTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGT                                                                                            >  SRR4302542.5461299/1‑94 (MQ=60)
   GTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGT                                                                                            <  SRR4302542.2885068/94‑1 (MQ=60)
   GTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGT                                                                                            <  SRR4302542.174440/94‑1 (MQ=60)
    TTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTG                                                                                           <  SRR4302542.7389202/94‑1 (MQ=60)
     TTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGA                                                                                          <  SRR4302542.7414242/94‑1 (MQ=60)
     TTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGA                                                                                          >  SRR4302542.6652625/1‑94 (MQ=60)
       TTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACC                                                                                        <  SRR4302542.2585874/94‑1 (MQ=60)
        TTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCG                                                                                       <  SRR4302542.3105588/94‑1 (MQ=60)
         TCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGG                                                                                      <  SRR4302542.7013115/94‑1 (MQ=60)
          CGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGG                                                                                     <  SRR4302542.1955557/94‑1 (MQ=60)
           GGGCGCCCCGAGCCTTGTAGAGAGTGGAGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGT                                                                                    <  SRR4302542.4968180/94‑1 (MQ=60)
            GGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTT                                                                                   <  SRR4302542.3945313/94‑1 (MQ=60)
            GGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTT                                                                                   <  SRR4302542.2055683/94‑1 (MQ=60)
            GGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTT                                                                                   <  SRR4302542.6342833/94‑1 (MQ=60)
            GGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTT                                                                                   <  SRR4302542.7158093/94‑1 (MQ=60)
            GGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTT                                                                                   <  SRR4302542.1525450/94‑1 (MQ=60)
              CGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAG                                                                                 >  SRR4302542.526665/1‑94 (MQ=60)
              CGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAG                                                                                 <  SRR4302542.7007819/94‑1 (MQ=60)
              CGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAG                                                                                 <  SRR4302542.6991078/94‑1 (MQ=60)
              CGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCACGTGACCGGGTTAG                                                                                 >  SRR4302542.3325828/1‑94 (MQ=60)
               GCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGC                                                                                >  SRR4302542.3745032/1‑94 (MQ=60)
               GCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGC                                                                                >  SRR4302542.7219550/1‑94 (MQ=60)
                CCTCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCC                                                                               <  SRR4302542.5243540/94‑1 (MQ=60)
                CCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCC                                                                               <  SRR4302542.404428/94‑1 (MQ=60)
                CCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCC                                                                               <  SRR4302542.4904094/94‑1 (MQ=60)
                 CCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCG                                                                              >  SRR4302542.4738269/1‑94 (MQ=60)
                 CCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCG                                                                              <  SRR4302542.7584810/94‑1 (MQ=60)
                  CCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGG                                                                             >  SRR4302542.6366607/1‑94 (MQ=60)
                    GAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCC                                                                           <  SRR4302542.5396612/94‑1 (MQ=60)
                    GAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCC                                                                           >  SRR4302542.3961681/1‑94 (MQ=60)
                     AGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCA                                                                          >  SRR4302542.454858/1‑94 (MQ=60)
                     AGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCA                                                                          >  SRR4302542.5035273/1‑94 (MQ=60)
                     AGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCA                                                                          <  SRR4302542.7072855/94‑1 (MQ=60)
                     AGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCA                                                                          >  SRR4302542.3784711/1‑94 (MQ=60)
                       CCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGA                                                                        >  SRR4302542.6331468/1‑94 (MQ=60)
                       CCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGA                                                                        >  SRR4302542.6184615/1‑94 (MQ=60)
                        CTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAA                                                                       >  SRR4302542.5071175/1‑94 (MQ=60)
                        CTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAA                                                                       >  SRR4302542.72124/1‑94 (MQ=60)
                        CTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAA                                                                       >  SRR4302542.7064109/1‑94 (MQ=60)
                        CTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAA                                                                       >  SRR4302542.154239/1‑94 (MQ=60)
                        CTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAA                                                                       >  SRR4302542.2794138/1‑94 (MQ=60)
                         TTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAAT                                                                      <  SRR4302542.3400134/94‑1 (MQ=60)
                          TGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATC                                                                     <  SRR4302542.6297636/94‑1 (MQ=60)
                           GTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCA                                                                    >  SRR4302542.819225/1‑94 (MQ=60)
                            TAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCAC                                                                   <  SRR4302542.4406623/94‑1 (MQ=60)
                            TAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCAC                                                                   >  SRR4302542.5716910/1‑94 (MQ=60)
                            TAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCAC                                                                   <  SRR4302542.3991847/94‑1 (MQ=60)
                             AGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACT                                                                  >  SRR4302542.3218053/1‑94 (MQ=60)
                             AGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACT                                                                  <  SRR4302542.2961261/94‑1 (MQ=60)
                             AGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACT                                                                  >  SRR4302542.475148/1‑94 (MQ=60)
                             AGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACT                                                                  >  SRR4302542.709623/1‑94 (MQ=60)
                             AGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACT                                                                  <  SRR4302542.7395661/94‑1 (MQ=60)
                               AGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTT                                                                <  SRR4302542.1440977/94‑1 (MQ=60)
                               AGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTT                                                                <  SRR4302542.107659/94‑1 (MQ=60)
                               AGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTT                                                                >  SRR4302542.5876867/1‑94 (MQ=60)
                                GAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTT                                                               <  SRR4302542.6906914/94‑1 (MQ=60)
                                GAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTT                                                               >  SRR4302542.6877730/1‑94 (MQ=60)
                                GAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTT                                                               >  SRR4302542.2638072/1‑94 (MQ=60)
                                GAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTT                                                               <  SRR4302542.5472059/94‑1 (MQ=60)
                                 AGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTT                                                              >  SRR4302542.44684/1‑94 (MQ=60)
                                 AGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTT                                                              <  SRR4302542.3051788/94‑1 (MQ=60)
                                  GTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTC                                                             >  SRR4302542.1137851/1‑94 (MQ=60)
                                   TGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCT                                                            <  SRR4302542.6140915/94‑1 (MQ=60)
                                   TGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCT                                                            >  SRR4302542.1949045/1‑94 (MQ=60)
                                    GGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTT                                                           >  SRR4302542.3197382/1‑94 (MQ=60)
                                    GGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTT                                                           >  SRR4302542.2701163/1‑94 (MQ=60)
                                    GGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTT                                                           >  SRR4302542.4958182/1‑94 (MQ=60)
                                     GGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTT                                                          <  SRR4302542.651869/94‑1 (MQ=60)
                                       GTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTAC                                                        <  SRR4302542.6643728/94‑1 (MQ=60)
                                        TTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACC                                                       >  SRR4302542.2826487/1‑94 (MQ=60)
                                            TTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGAC                                                   <  SRR4302542.6394481/94‑1 (MQ=60)
                                             TTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCTCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACG                                                  >  SRR4302542.5512872/1‑94 (MQ=60)
                                             TTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACG                                                  <  SRR4302542.5677214/94‑1 (MQ=60)
                                              TTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGA                                                 >  SRR4302542.5031964/1‑94 (MQ=60)
                                               TATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGAC                                                >  SRR4302542.231831/1‑94 (MQ=60)
                                               TATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGAC                                                <  SRR4302542.6812053/94‑1 (MQ=60)
                                               TATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGAC                                                >  SRR4302542.3035792/1‑94 (MQ=60)
                                               TATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGAC                                                >  SRR4302542.7009272/1‑94 (MQ=60)
                                                ATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACG                                               >  SRR4302542.5130818/1‑94 (MQ=60)
                                                 TAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGC                                              >  SRR4302542.3477040/1‑94 (MQ=60)
                                                 TAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGC                                              >  SRR4302542.2033616/1‑94 (MQ=60)
                                                  AGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCC                                             >  SRR4302542.6272129/1‑94 (MQ=60)
                                                   GTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCA                                            >  SRR4302542.3229519/1‑94 (MQ=60)
                                                   GTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCA                                            >  SRR4302542.6515387/1‑94 (MQ=60)
                                                   GTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCA                                            >  SRR4302542.6365291/1‑94 (MQ=60)
                                                   GTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCA                                            <  SRR4302542.7104650/94‑1 (MQ=60)
                                                    TTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAG                                           <  SRR4302542.854678/94‑1 (MQ=60)
                                                     TACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGC                                          <  SRR4302542.2862810/94‑1 (MQ=60)
                                                      ACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCC                                         >  SRR4302542.3582957/1‑94 (MQ=60)
                                                      ACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCC                                         <  SRR4302542.448170/94‑1 (MQ=60)
                                                       CTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCT                                        >  SRR4302542.6413870/1‑94 (MQ=60)
                                                       CTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCT                                        <  SRR4302542.4975979/94‑1 (MQ=60)
                                                        TGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTT                                       <  SRR4302542.4072446/94‑1 (MQ=60)
                                                         GCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTC                                      >  SRR4302542.2331869/1‑94 (MQ=60)
                                                          CTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCT                                     <  SRR4302542.2482443/94‑1 (MQ=60)
                                                          CTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCT                                     <  SRR4302542.6821529/94‑1 (MQ=60)
                                                          CTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCT                                     <  SRR4302542.2204550/94‑1 (MQ=60)
                                                          CTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCT                                     >  SRR4302542.18875/1‑94 (MQ=60)
                                                            TGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTT                                   <  SRR4302542.3142392/94‑1 (MQ=60)
                                                            TGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTT                                   >  SRR4302542.5280252/1‑94 (MQ=60)
                                                            TGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTT                                   >  SRR4302542.57426/1‑94 (MQ=60)
                                                            TGTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTT                                   <  SRR4302542.4199642/94‑1 (MQ=60)
                                                             GTGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTC                                  <  SRR4302542.3157092/94‑1 (MQ=60)
                                                              TGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCT                                 <  SRR4302542.5083627/94‑1 (MQ=60)
                                                              TGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCT                                 <  SRR4302542.1982243/94‑1 (MQ=60)
                                                              TGGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCT                                 >  SRR4302542.1163581/1‑94 (MQ=60)
                                                               GGGAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTG                                <  SRR4302542.4477447/94‑1 (MQ=60)
                                                                 GAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAG                              >  SRR4302542.2532693/1‑94 (MQ=60)
                                                                 GAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAG                              <  SRR4302542.952214/94‑1 (MQ=60)
                                                                 GAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAG                              <  SRR4302542.3124707/94‑1 (MQ=60)
                                                                 GAGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAG                              <  SRR4302542.5465957/94‑1 (MQ=60)
                                                                  AGGGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGT                             >  SRR4302542.6166928/1‑94 (MQ=60)
                                                                  AGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGT                             >  SRR4302542.7553113/1‑94 (MQ=60)
                                                                    GGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCT                           >  SRR4302542.2008081/1‑94 (MQ=60)
                                                                    GGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCT                           <  SRR4302542.4298964/94‑1 (MQ=60)
                                                                    GGAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCT                           <  SRR4302542.1493742/94‑1 (MQ=60)
                                                                     GAGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTG                          <  SRR4302542.6541282/94‑1 (MQ=60)
                                                                      AGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGC                         >  SRR4302542.4541749/1‑94 (MQ=60)
                                                                      AGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGC                         >  SRR4302542.3850819/1‑94 (MQ=60)
                                                                      AGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGC                         >  SRR4302542.3013994/1‑94 (MQ=60)
                                                                      AGATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGC                         >  SRR4302542.6153173/1‑94 (MQ=60)
                                                                       GATTATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCG                        <  SRR4302542.1510580/94‑1 (MQ=60)
                                                                          TATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCA                     >  SRR4302542.3439730/1‑94 (MQ=60)
                                                                           ATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTAGCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCAC                    >  SRR4302542.7358581/1‑94 (MQ=60)
                                                                           ATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCAC                    <  SRR4302542.368166/94‑1 (MQ=60)
                                                                           ATGTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCAC                    >  SRR4302542.172336/1‑94 (MQ=60)
                                                                             GTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACAC                  <  SRR4302542.6909433/94‑1 (MQ=60)
                                                                             GTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACAC                  <  SRR4302542.455752/94‑1 (MQ=60)
                                                                             GTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACAC                  <  SRR4302542.3772012/94‑1 (MQ=60)
                                                                             GTTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACAC                  >  SRR4302542.6185792/1‑94 (MQ=60)
                                                                             GTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACAC                  <  SRR4302542.1966582/94‑1 (MQ=60)
                                                                             GTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACAC                  >  SRR4302542.6200224/1‑94 (MQ=60)
                                                                              TTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACG                 >  SRR4302542.7269522/1‑94 (MQ=60)
                                                                              TTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACG                 <  SRR4302542.1552455/94‑1 (MQ=60)
                                                                              TTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACG                 <  SRR4302542.4063547/94‑1 (MQ=60)
                                                                              TTATCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACG                 <  SRR4302542.6473346/94‑1 (MQ=60)
                                                                                 TCTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCT              <  SRR4302542.5565751/94‑1 (MQ=60)
                                                                                  CTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTG             >  SRR4302542.3516691/1‑94 (MQ=60)
                                                                                  CTCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTG             >  SRR4302542.5398414/1‑94 (MQ=60)
                                                                                   TCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGA            <  SRR4302542.780777/94‑1 (MQ=60)
                                                                                   TCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGA            >  SRR4302542.7590021/1‑94 (MQ=60)
                                                                                   TCCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGA            <  SRR4302542.1521406/94‑1 (MQ=60)
                                                                                    CCTCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGAT           >  SRR4302542.4123702/1‑94 (MQ=60)
                                                                                    CCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGAT           <  SRR4302542.2062540/94‑1 (MQ=60)
                                                                                    CCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGAT           >  SRR4302542.5090510/1‑94 (MQ=60)
                                                                                      TCATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAG         <  SRR4302542.1613453/94‑1 (MQ=60)
                                                                                        ATCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCT       >  SRR4302542.4662179/1‑94 (MQ=60)
                                                                                         TCCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTA      <  SRR4302542.5451121/94‑1 (MQ=60)
                                                                                          CCCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAA     >  SRR4302542.6398521/1‑94 (MQ=60)
                                                                                           CCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAAT    <  SRR4302542.3275605/94‑1 (MQ=60)
                                                                                           CCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAAT    <  SRR4302542.6881664/94‑1 (MQ=60)
                                                                                           CCGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAAT    <  SRR4302542.4723447/94‑1 (MQ=60)
                                                                                           CCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAAT    >  SRR4302542.5119429/1‑94 (MQ=60)
                                                                                            CGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAATG   >  SRR4302542.73003/1‑94 (MQ=60)
                                                                                            CGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAATG   <  SRR4302542.3037672/94‑1 (MQ=60)
                                                                                            CGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAATG   <  SRR4302542.6692861/94‑1 (MQ=60)
                                                                                            CGTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAATG   >  SRR4302542.1476428/1‑94 (MQ=60)
                                                                                             GTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAATGC  >  SRR4302542.5888065/1‑94 (MQ=60)
                                                                                             GTGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAATGC  <  SRR4302542.2886155/94‑1 (MQ=60)
                                                                                             |                                                                                             
CCCGTTTTTTCGGGCGCCCCGAGCCTTGTAGAGAGTGGGGTTATTTTTATAGTTACTGCTTGTGGGAGGGAGATTATGTTATCTCCTCATCCCATGTGACCGGGTTAGCCGGCCAGAATCACTTTTTCTTTACCGGACGACGCCAGCCTTCTTTCTGAGTCTGCGGCACACGGCTGATAGCTAATGC  >  NC_000913/3911340‑3911526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑