Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,923,014	A→G	I83T (ATA→ACA)	gidA ←	glucose‑inhibited division

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,923,014	0	A	G	85.0%	711.7 / 114.1	306	I83T (ATA→ACA)	gidA	glucose‑inhibited division
Reads supporting (aligned to +/- strand): ref base A (21/25); new base G (138/122); total (159/147)
Fisher's exact test for biased strand distribution p-value = 4.24e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01

Only 100 of 307 total aligned reads displayed.

TCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCG  >  NC_000913/3922924‑3923106

tcCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTc                                                                                            <  1:6139294/93‑1 (MQ=255)

tcCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTc                                                                                            <  2:3373593/93‑1 (MQ=255)

tcCAGCGCCGTACGCACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTc                                                                                            <  1:3384352/93‑1 (MQ=255)

 ccAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTcc                                                                                           >  1:5903737/1‑93 (MQ=255)

   aGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTa                                                                                         <  2:3848557/93‑1 (MQ=255)

    gcgcCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTaa                                                                                        <  2:6209046/93‑1 (MQ=255)

    gcgcCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTaa                                                                                        <  1:6444848/93‑1 (MQ=255)

    gcgcCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTaa                                                                                        >  1:3910730/1‑93 (MQ=255)

      gcCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAAc                                                                                      <  2:32224/93‑1 (MQ=255)

      gcCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAAc                                                                                      >  2:1258079/1‑93 (MQ=255)

      gcCGCACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAAc                                                                                      >  2:7456765/1‑93 (MQ=255)

        cgtacgtaCCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTg                                                                                    <  2:731874/93‑1 (MQ=255)

         gtacgtacCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTgg                                                                                   >  2:1061608/1‑93 (MQ=255)

          tacgtacCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGa                                                                                  >  2:328711/1‑93 (MQ=255)

          tacgtacCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGa                                                                                  <  1:5047293/93‑1 (MQ=255)

            cgtacCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATa                                                                                >  2:5005827/1‑93 (MQ=255)

            cgtacCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATa                                                                                <  2:5989050/93‑1 (MQ=255)

             gtacCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATAc                                                                               <  2:4769964/93‑1 (MQ=255)

               acCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATAccc                                                                             >  2:302173/1‑93 (MQ=255)

                ccGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCg                                                                            <  1:4744399/93‑1 (MQ=255)

                 cGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGc                                                                           >  1:2291312/1‑93 (MQ=255)

                  gCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGcc                                                                          >  1:839188/1‑93 (MQ=255)

                  gCCGGACGGTAGAGCACCCGATCCGCCTGAGCTCGGGTAGCGCGACCCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATCCCCGcc                                                                          <  1:1281846/93‑1 (MQ=255)

                   ccTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCt                                                                         <  2:4369644/93‑1 (MQ=255)

                    cTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTg                                                                        >  1:1934757/1‑93 (MQ=255)

                    cTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTg                                                                        >  1:2590608/1‑93 (MQ=255)

                     tGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTga                                                                       <  1:7054037/93‑1 (MQ=255)

                     tGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTga                                                                       <  1:2051710/93‑1 (MQ=255)

                     tGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTga                                                                       >  2:1991696/1‑93 (MQ=255)

                       aCGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTgatc                                                                     >  2:6098463/1‑93 (MQ=255)

                       aCGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTgatc                                                                     <  1:4048441/93‑1 (MQ=255)

                         ggTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTgatcga                                                                   >  2:3729586/1‑93 (MQ=255)

                          gTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTgatcgat                                                                  <  2:1714252/93‑1 (MQ=255)

                                 acacGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTc                                                           >  1:6671678/1‑93 (MQ=255)

                                  cacGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCg                                                          >  2:2956197/1‑93 (MQ=255)

                                    cGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGcc                                                        >  2:5475369/1‑93 (MQ=255)

                                    cGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGcc                                                        <  1:5809101/93‑1 (MQ=255)

                                    cGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGcc                                                        >  1:1854088/1‑93 (MQ=255)

                                       tCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATc                                                     >  1:3569705/1‑93 (MQ=255)

                                       tCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATc                                                     <  1:110499/93‑1 (MQ=255)

                                       tCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATc                                                     >  1:1352565/1‑93 (MQ=255)

                                       tCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATc                                                     >  2:7272636/1‑93 (MQ=255)

                                        ccGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCa                                                    <  1:6264798/93‑1 (MQ=255)

                                          gCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGa                                                  >  1:5151803/1‑93 (MQ=255)

                                          gCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGa                                                  >  2:3611528/1‑93 (MQ=255)

                                            cTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAcc                                                >  2:6669219/1‑93 (MQ=255)

                                            cTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAcc                                                >  1:6815781/1‑93 (MQ=255)

                                              gAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAccgc                                              >  1:3667260/1‑93 (MQ=255)

                                               aGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAccgcc                                             <  1:6513119/93‑1 (MQ=255)

                                               aGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAccgcc                                             <  1:5604113/93‑1 (MQ=255)

                                                gCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGAccgccg                                            >  2:2920369/1‑93 (MQ=255)

                                                 cTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGa                                           <  1:3072227/93‑1 (MQ=255)

                                                  tCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAg                                          >  2:7358271/1‑93 (MQ=255)

                                                  tCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAg                                          >  2:422443/1‑93 (MQ=255)

                                                    gggTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTg                                        >  1:6040023/1‑93 (MQ=255)

                                                      ggaGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCa                                      >  1:1161829/3‑93 (MQ=255)

                                                        aGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATc                                    <  1:3768591/93‑1 (MQ=255)

                                                         gcgcGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATcc                                   >  2:4647898/1‑93 (MQ=255)

                                                         gcgcGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATcc                                   <  2:2716280/93‑1 (MQ=255)

                                                          cgcgAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCa                                  <  2:6350593/93‑1 (MQ=255)

                                                           gcgAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCAc                                 <  2:4574225/93‑1 (MQ=255)

                                                           gcgAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCAc                                 >  2:7467011/1‑93 (MQ=255)

                                                            cgAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCAct                                <  2:5869684/93‑1 (MQ=255)

                                                             gAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCActt                               >  1:6885319/1‑93 (MQ=255)

                                                             gAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCActt                               >  2:4816080/1‑93 (MQ=255)

                                                               aCCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCActtct                             >  2:3887421/1‑93 (MQ=255)

                                                                 cgccgGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCttt                           >  1:4527420/1‑93 (MQ=255)

                                                                 cgccgGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCttt                           >  2:5627494/1‑93 (MQ=255)

                                                                  gccgGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCtttt                          >  1:945166/1‑93 (MQ=255)

                                                                  gccgGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCtttt                          >  1:2795694/1‑93 (MQ=255)

                                                                   ccgGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTa                         >  1:1608263/1‑93 (MQ=255)

                                                                    cgGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATCCCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTAc                        <  2:4010105/93‑1 (MQ=255)

                                                                    cgGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTAc                        >  1:1443097/1‑93 (MQ=255)

                                                                    cgGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTAc                        <  1:7186294/93‑1 (MQ=255)

                                                                      gTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCa                      >  2:5317405/1‑93 (MQ=255)

                                                                      gTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCa                      >  1:1770579/1‑93 (MQ=255)

                                                                      gTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCa                      >  2:708304/1‑93 (MQ=255)

                                                                        ccTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGa                    >  1:1326511/1‑93 (MQ=255)

                                                                        ccTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGa                    <  1:4846741/93‑1 (MQ=255)

                                                                        ccTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGa                    <  2:7189907/93‑1 (MQ=255)

                                                                        ccTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGCGCATCCACTTCTTTTACCAGa                    <  1:2325334/93‑1 (MQ=255)

                                                                         cTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGAt                   >  1:6594425/1‑93 (MQ=255)

                                                                           ttgcttgcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGt                 >  1:2200218/1‑93 (MQ=255)

                                                                           ttgcttgcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGt                 >  1:1732644/1‑93 (MQ=255)

                                                                            tgcttgcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTc                >  2:4324958/1‑93 (MQ=255)

                                                                            tgcttgcGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTc                <  2:2521728/93‑1 (MQ=255)

                                                                             gcttgcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTcc               >  1:5230921/1‑93 (MQ=255)

                                                                             gcttgcGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTcc               <  1:5088595/93‑1 (MQ=255)

                                                                              cttgcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTccc              <  2:4422939/93‑1 (MQ=255)

                                                                               ttgcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCt             <  2:5283261/93‑1 (MQ=255)

                                                                               ttgcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCt             >  1:7432690/1‑93 (MQ=255)

                                                                               ttgcGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCt             <  2:2666865/93‑1 (MQ=255)

                                                                                tgcGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCtt            <  2:6042225/93‑1 (MQ=255)

                                                                                  gttttGGTGTCCTAAACGGGTTTCCCGCCTCATCGATCGATTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTcc          <  1:291659/91‑1 (MQ=255)

                                                                                   gTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTccc         <  1:3264036/93‑1 (MQ=255)

                                                                                   gTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTccc         <  2:1401940/93‑1 (MQ=255)

                                                                                    tttAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCa        >  1:297124/1‑93 (MQ=255)

                                                                                      tAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAAt      <  2:2320130/93‑1 (MQ=255)

                                                                                       aGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATa     >  1:6377590/1‑93 (MQ=255)

                                                                                          aTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATAccg  >  1:4376944/1‑93 (MQ=255)

TCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCG  >  NC_000913/3922924‑3923106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGC  >  NC_000913/3922923‑3923107

CTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTC                                                                                             >  SRR4302542.5299425/1‑94 (MQ=60)

 TCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCC                                                                                            >  SRR4302542.3747057/1‑94 (MQ=60)

 TCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCC                                                                                            >  SRR4302542.5960965/1‑94 (MQ=60)

 TCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCC                                                                                            <  SRR4302542.6198693/94‑1 (MQ=60)

 TCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCC                                                                                            >  SRR4302542.6584187/1‑94 (MQ=60)

 TCCAGCGCCGTACGCACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCC                                                                                            <  SRR4302542.3416133/94‑1 (MQ=60)

    AGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAA                                                                                         >  SRR4302542.2606912/1‑94 (MQ=60)

    AGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAA                                                                                         >  SRR4302542.3949323/1‑94 (MQ=60)

    AGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAA                                                                                         >  SRR4302542.630797/1‑94 (MQ=60)

    AGCGCCGTACGCACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAA                                                                                         >  SRR4302542.5124419/1‑94 (MQ=60)

     GCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAA                                                                                        <  SRR4302542.6508316/94‑1 (MQ=60)

      CGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAAC                                                                                       >  SRR4302542.4468759/1‑94 (MQ=60)

      CGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAAC                                                                                       <  SRR4302542.6430348/94‑1 (MQ=60)

      CGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAAC                                                                                       <  SRR4302542.1741152/94‑1 (MQ=60)

       GCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACT                                                                                      <  SRR4302542.3217716/94‑1 (MQ=60)

       GCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACT                                                                                      <  SRR4302542.1134596/94‑1 (MQ=60)

         CGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGG                                                                                    >  SRR4302542.3753138/1‑94 (MQ=60)

         CGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGG                                                                                    <  SRR4302542.5692318/94‑1 (MQ=60)

         CGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGG                                                                                    <  SRR4302542.6093722/94‑1 (MQ=60)

         CGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGG                                                                                    >  SRR4302542.6331255/1‑94 (MQ=60)

          GTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGA                                                                                   <  SRR4302542.510531/94‑1 (MQ=60)

           TACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGAT                                                                                  <  SRR4302542.5096292/94‑1 (MQ=60)

            ACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATA                                                                                 <  SRR4302542.434649/94‑1 (MQ=60)

             CTTACCGCCTGACGGTAGAGCACACGCTCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATAC                                                                                <  SRR4302542.134021/94‑1 (MQ=60)

             CGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATAC                                                                                >  SRR4302542.356369/1‑94 (MQ=60)

             CGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATAC                                                                                <  SRR4302542.1694065/94‑1 (MQ=60)

              GTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACC                                                                               <  SRR4302542.1836810/94‑1 (MQ=60)

              GTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACC                                                                               >  SRR4302542.2058597/1‑94 (MQ=60)

                 CCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGC                                                                            >  SRR4302542.1828918/1‑94 (MQ=60)

                 CCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGC                                                                            <  SRR4302542.4790642/94‑1 (MQ=60)

                 CCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGC                                                                            >  SRR4302542.2311001/1‑94 (MQ=60)

                  CGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCC                                                                           >  SRR4302542.846443/1‑94 (MQ=60)

                   GCCGGACGGTAGAGCACCCGATCCGCCTGAGCTCGGGTAGCGCGACCCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATCCCCGCCT                                                                          <  SRR4302542.1292880/94‑1 (MQ=60)

                    CCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTG                                                                         >  SRR4302542.1951464/1‑94 (MQ=60)

                    CCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTG                                                                         >  SRR4302542.2615699/1‑94 (MQ=60)

                      TGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGAT                                                                       <  SRR4302542.2069441/94‑1 (MQ=60)

                      TGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGAT                                                                       <  SRR4302542.877205/94‑1 (MQ=60)

                      TGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGAT                                                                       <  SRR4302542.7123284/94‑1 (MQ=60)

                      TGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGAT                                                                       <  SRR4302542.723070/94‑1 (MQ=60)

                       GACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATC                                                                      <  SRR4302542.7586434/94‑1 (MQ=60)

                       GACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATC                                                                      <  SRR4302542.6471208/94‑1 (MQ=60)

                        ACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCG                                                                     <  SRR4302542.4088378/94‑1 (MQ=60)

                         CGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGA                                                                    <  SRR4302542.6099087/94‑1 (MQ=60)

                         CGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGA                                                                    <  SRR4302542.5256678/94‑1 (MQ=60)

                          GGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGAT                                                                   >  SRR4302542.6229329/1‑94 (MQ=60)

                          GGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGAT                                                                   <  SRR4302542.3607886/94‑1 (MQ=60)

                          GGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGAT                                                                   >  SRR4302542.2171834/1‑94 (MQ=60)

                           GTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATC                                                                  <  SRR4302542.5175263/94‑1 (MQ=60)

                            TAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCG                                                                 >  SRR4302542.140615/1‑94 (MQ=60)

                             AGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGC                                                                <  SRR4302542.4909093/94‑1 (MQ=60)

                             AGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGC                                                                >  SRR4302542.6155256/1‑94 (MQ=60)

                                GCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTT                                                             >  SRR4302542.5250736/1‑94 (MQ=60)

                                 CACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTC                                                            >  SRR4302542.3083761/1‑94 (MQ=60)

                                 CACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTC                                                            >  SRR4302542.6737408/1‑94 (MQ=60)

                                  ACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCG                                                           >  SRR4302542.2687871/1‑94 (MQ=60)

                                  ACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCG                                                           <  SRR4302542.2704937/94‑1 (MQ=60)

                                    ACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCC                                                         >  SRR4302542.1870121/1‑94 (MQ=60)

                                     CGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCA                                                        <  SRR4302542.6532092/94‑1 (MQ=60)

                                     CGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCA                                                        <  SRR4302542.5865471/94‑1 (MQ=60)

                                      GATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCAT                                                       >  SRR4302542.295676/1‑94 (MQ=60)

                                      GATCCGCCCGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCAT                                                       <  SRR4302542.1151194/94‑1 (MQ=60)

                                       ATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATC                                                      <  SRR4302542.2954125/94‑1 (MQ=60)

                                       ATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATC                                                      >  SRR4302542.3603022/1‑94 (MQ=60)

                                       ATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATC                                                      >  SRR4302542.4258470/1‑94 (MQ=60)

                                       ATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATC                                                      >  SRR4302542.1364243/1‑94 (MQ=60)

                                        TCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCA                                                     <  SRR4302542.111405/94‑1 (MQ=60)

                                         CCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAG                                                    <  SRR4302542.486871/94‑1 (MQ=60)

                                         CCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAG                                                    <  SRR4302542.6326532/94‑1 (MQ=60)

                                          CGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGA                                                   <  SRR4302542.1232447/94‑1 (MQ=60)

                                          CGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGA                                                   >  SRR4302542.5201877/1‑94 (MQ=60)

                                            CCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACC                                                 <  SRR4302542.194928/94‑1 (MQ=60)

                                            CCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACC                                                 >  SRR4302542.6882783/1‑94 (MQ=60)

                                             CTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCG                                                <  SRR4302542.2230293/94‑1 (MQ=60)

                                             CTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCG                                                >  SRR4302542.2922170/1‑94 (MQ=60)

                                              TGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGC                                               >  SRR4302542.3702238/1‑94 (MQ=60)

                                              TGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGC                                               >  SRR4302542.2285280/1‑94 (MQ=60)

                                               GAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCC                                              <  SRR4302542.5036639/94‑1 (MQ=60)

                                               GAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGAAACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCC                                              <  SRR4302542.5914142/94‑1 (MQ=60)

                                                AGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCG                                             <  SRR4302542.5658558/94‑1 (MQ=60)

                                                AGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCG                                             >  SRR4302542.1339875/1‑94 (MQ=60)

                                                AGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCG                                             <  SRR4302542.6577309/94‑1 (MQ=60)

                                                  CTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAG                                           >  SRR4302542.658196/1‑94 (MQ=60)

                                                  CTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAG                                           >  SRR4302542.3315965/1‑94 (MQ=60)

                                                  CTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAG                                           >  SRR4302542.3297093/1‑94 (MQ=60)

                                                  CTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAG                                           <  SRR4302542.586905/94‑1 (MQ=60)

                                                  CTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAG                                           <  SRR4302542.3101505/94‑1 (MQ=60)

                                                   TCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGT                                          <  SRR4302542.1765064/94‑1 (MQ=60)

                                                   TCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGT                                          <  SRR4302542.801733/94‑1 (MQ=60)

                                                    CGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTG                                         >  SRR4302542.6098495/1‑94 (MQ=60)

                                                    CGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTG                                         <  SRR4302542.2333845/94‑1 (MQ=60)

                                                     GGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGC                                        <  SRR4302542.386418/94‑1 (MQ=60)

                                                      GGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCA                                       >  SRR4302542.6513798/1‑94 (MQ=60)

                                                      GGGAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCA                                       >  SRR4302542.1171806/1‑94 (MQ=60)

                                                       GTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCAT                                      <  SRR4302542.153340/94‑1 (MQ=60)

                                                         AGCGCGACCCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATCCCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCC                                    <  SRR4302542.3691288/94‑1 (MQ=60)

                                                         AGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCC                                    <  SRR4302542.2876038/94‑1 (MQ=60)

                                                         AGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCC                                    <  SRR4302542.3805858/94‑1 (MQ=60)

                                                           CGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCAC                                  <  SRR4302542.6573561/94‑1 (MQ=60)

                                                            GCGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACT                                 >  SRR4302542.5368699/1‑94 (MQ=60)

                                                             CGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTT                                >  SRR4302542.199510/1‑94 (MQ=60)

                                                             CGAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTT                                >  SRR4302542.6952946/1‑94 (MQ=60)

                                                              GAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTC                               >  SRR4302542.4068967/1‑94 (MQ=60)

                                                              GAACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTC                               >  SRR4302542.4708285/1‑94 (MQ=60)

                                                              GAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTC                               >  SRR4302542.1874118/1‑94 (MQ=60)

                                                               AACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCT                              <  SRR4302542.7325454/94‑1 (MQ=60)

                                                               AACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCT                              >  SRR4302542.2580361/1‑94 (MQ=60)

                                                                ACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTT                             <  SRR4302542.1297069/94‑1 (MQ=60)

                                                                ACCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTT                             >  SRR4302542.5668088/1‑94 (MQ=60)

                                                                 CCGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTT                            >  SRR4302542.4571768/1‑94 (MQ=60)

                                                                  CGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTT                           >  SRR4302542.953297/1‑94 (MQ=60)

                                                                  CGCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTT                           >  SRR4302542.2822593/1‑94 (MQ=60)

                                                                  CGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTT                           >  SRR4302542.6676061/1‑94 (MQ=60)

                                                                   GCCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTA                          >  SRR4302542.1622155/1‑94 (MQ=60)

                                                                    CCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTAC                         >  SRR4302542.871815/1‑94 (MQ=60)

                                                                    CCGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTAC                         >  SRR4302542.1455555/1‑94 (MQ=60)

                                                                     CGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACC                        >  SRR4302542.3920688/1‑94 (MQ=60)

                                                                     CGGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACC                        <  SRR4302542.7256765/94‑1 (MQ=60)

                                                                     CGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACC                        >  SRR4302542.2327179/1‑94 (MQ=60)

                                                                      GGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCA                       >  SRR4302542.694101/1‑94 (MQ=60)

                                                                      GGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCA                       <  SRR4302542.4711530/94‑1 (MQ=60)

                                                                      GGTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCA                       >  SRR4302542.6821786/1‑94 (MQ=60)

                                                                      GGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCA                       >  SRR4302542.1785928/1‑94 (MQ=60)

                                                                       GTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAG                      <  SRR4302542.4869657/94‑1 (MQ=60)

                                                                       GTCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAG                      <  SRR4302542.3171427/94‑1 (MQ=60)

                                                                        TCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGA                     >  SRR4302542.2128671/1‑94 (MQ=60)

                                                                        TCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGA                     >  SRR4302542.6462845/1‑94 (MQ=60)

                                                                        TCCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGA                     >  SRR4302542.1337934/1‑94 (MQ=60)

                                                                         CCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGAT                    <  SRR4302542.4893941/94‑1 (MQ=60)

                                                                         CCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGAT                    >  SRR4302542.155144/1‑94 (MQ=60)

                                                                         CCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGAT                    >  SRR4302542.6659396/1‑94 (MQ=60)

                                                                         CCTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGCGCATCCACTTCTTTTACCAGAT                    <  SRR4302542.2345269/94‑1 (MQ=60)

                                                                         CCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGAT                    >  SRR4302542.7062726/1‑94 (MQ=60)

                                                                          CTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATG                   >  SRR4302542.7242060/1‑94 (MQ=60)

                                                                          CTTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATG                   >  SRR4302542.1314111/1‑94 (MQ=60)

                                                                           TTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGT                  >  SRR4302542.6820228/1‑94 (MQ=60)

                                                                           TTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGT                  >  SRR4302542.3095755/1‑94 (MQ=60)

                                                                           TTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGT                  >  SRR4302542.1747680/1‑94 (MQ=60)

                                                                           TTTGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGT                  >  SRR4302542.2219167/1‑94 (MQ=60)

                                                                             TGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCC                >  SRR4302542.5281787/1‑94 (MQ=60)

                                                                             TGCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCC                >  SRR4302542.6931628/1‑94 (MQ=60)

                                                                              GCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCGGATGTCCC               <  SRR4302542.1221502/94‑1 (MQ=60)

                                                                              GCTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCC               >  SRR4302542.6098337/1‑94 (MQ=60)

                                                                              GCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCC               <  SRR4302542.5138056/94‑1 (MQ=60)

                                                                               CTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCT              <  SRR4302542.3465705/94‑1 (MQ=60)

                                                                               CTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCT              <  SRR4302542.4018611/94‑1 (MQ=60)

                                                                               CTTGCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCT              >  SRR4302542.7505428/1‑94 (MQ=60)

                                                                                  GCGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCC           <  SRR4302542.6984920/94‑1 (MQ=60)

                                                                                   CGTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCC          <  SRR4302542.1761427/94‑1 (MQ=60)

                                                                                    GTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCA         <  SRR4302542.5151222/94‑1 (MQ=60)

                                                                                    GTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCA         <  SRR4302542.3294854/94‑1 (MQ=60)

                                                                                    GTTTAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCA         >  SRR4302542.299720/1‑94 (MQ=60)

                                                                                    GTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCA         >  SRR4302542.145219/1‑94 (MQ=60)

                                                                                     TTTAGTGTCCTAAACTGGATACACGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAA        >  SRR4302542.4629979/1‑94 (MQ=60)

                                                                                      TTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAAT       <  SRR4302542.4481237/94‑1 (MQ=60)

                                                                                       TAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATA      >  SRR4302542.7365986/1‑94 (MQ=60)

                                                                                       TAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATA      >  SRR4302542.6440384/1‑94 (MQ=60)

                                                                                       TAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATA      >  SRR4302542.249240/1‑94 (MQ=60)

                                                                                       TAGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATA      >  SRR4302542.6663849/1‑94 (MQ=60)

                                                                                        AGTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATAC     >  SRR4302542.2053378/1‑94 (MQ=60)

                                                                                         GTGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACC    <  SRR4302542.3339450/94‑1 (MQ=60)

                                                                                          TGTCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCG   >  SRR4302542.5375548/1‑94 (MQ=60)

                                                                                          TATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCG   >  SRR4302542.4419901/1‑94 (MQ=60)

                                                                                           ATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGC  >  SRR4302542.2338593/1‑94 (MQ=60)

CTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCTCGGGTAGCGCGAACCGCCGGTCCTTTGCTTGCGTTTAGTATCCTAAACTGGATACCCGCCTGATCGATCGCTTTCGCCATCAGACCGCCGAGTGCATCCACTTCTTTTACCAGATGTCCCTTCCCAATACCGC  >  NC_000913/3922923‑3923107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`