Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,935,303	A→G	Q128Q (CAA→CAG)	rbsK →	ribokinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,935,303	0	A	G	84.7%	725.5 / 115.0	314	Q128Q (CAA→CAG)	rbsK	ribokinase
Reads supporting (aligned to +/- strand): ref base A (20/28); new base G (144/122); total (164/150)
Fisher's exact test for biased strand distribution p-value = 1.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 315 total aligned reads displayed.

GCGCTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATCAA  >  NC_000913/3935211‑3935393

 cgcTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAAc                                                                                           <  2:1523473/93‑1 (MQ=255)

  gcTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCg                                                                                          >  1:6863144/1‑93 (MQ=255)

  gcTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCg                                                                                          >  1:3978160/1‑93 (MQ=255)

  gcTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCg                                                                                          >  2:3032157/1‑93 (MQ=255)

   cTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGt                                                                                         >  2:2493981/1‑93 (MQ=255)

   cTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGt                                                                                         >  1:14248/1‑93 (MQ=255)

    tGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTg                                                                                        >  2:3420228/1‑93 (MQ=255)

     gATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGa                                                                                       <  1:5592533/93‑1 (MQ=255)

     gATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGa                                                                                       <  1:6439277/93‑1 (MQ=255)

     gATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGa                                                                                       <  2:4075112/93‑1 (MQ=255)

       tttttGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGc                                                                                     >  2:2942273/1‑93 (MQ=255)

       tttttGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGc                                                                                     >  2:2230240/1‑93 (MQ=255)

          ttGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTa                                                                                  <  1:2806537/93‑1 (MQ=255)

          ttGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTa                                                                                  <  2:2204198/93‑1 (MQ=255)

           tGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTAt                                                                                 <  2:7512102/93‑1 (MQ=255)

           tGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTAt                                                                                 <  2:170703/93‑1 (MQ=255)

              tAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGc                                                                              >  2:4370441/1‑93 (MQ=255)

               aaTGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGcc                                                                             <  2:3679005/93‑1 (MQ=255)

                aTGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCCGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCa                                                                            <  1:5844470/93‑1 (MQ=255)

                 tGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCaa                                                                           <  1:2332528/93‑1 (MQ=255)

                 tGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCaa                                                                           <  1:4649946/93‑1 (MQ=255)

                 tGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCaa                                                                           <  1:3478219/93‑1 (MQ=255)

                 tGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCaa                                                                           >  2:6837488/1‑93 (MQ=255)

                   gCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAAcg                                                                         >  2:5627870/1‑93 (MQ=255)

                    cGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAAcgc                                                                        >  2:5755915/1‑93 (MQ=255)

                      aaGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGt                                                                      >  2:2729261/1‑93 (MQ=255)

                      aaGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGt                                                                      <  2:4276524/93‑1 (MQ=255)

                      aaGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGt                                                                      >  2:6990533/1‑93 (MQ=255)

                       aGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTc                                                                     <  2:932183/93‑1 (MQ=255)

                        ggTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCa                                                                    <  2:662163/93‑1 (MQ=255)

                        ggTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCa                                                                    <  1:4501066/93‑1 (MQ=255)

                        ggTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCa                                                                    <  1:1755569/93‑1 (MQ=255)

                         gTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAg                                                                   <  1:2020019/93‑1 (MQ=255)

                             gaATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCatt                                                               >  2:2913886/1‑93 (MQ=255)

                              aaTGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCatta                                                              <  1:6318226/93‑1 (MQ=255)

                               aTGTCATCGGTATTCATGCCGGCGCTAGTGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCattat                                                             >  2:6421972/1‑93 (MQ=255)

                                tGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCattatt                                                            <  2:2613406/93‑1 (MQ=255)

                                tGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCattatt                                                            <  1:2710515/93‑1 (MQ=255)

                                   cATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAAt                                                         >  2:6081745/1‑93 (MQ=255)

                                   cATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAAt                                                         >  1:7158672/1‑93 (MQ=255)

                                    aTCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATg                                                        >  2:4682640/1‑93 (MQ=255)

                                    aTCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATg                                                        >  2:2314911/1‑93 (MQ=255)

                                     tCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGc                                                       >  2:3470457/1‑93 (MQ=255)

                                     tCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGc                                                       >  1:2143760/1‑93 (MQ=255)

                                     tCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGc                                                       <  1:5931928/93‑1 (MQ=255)

                                     tCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGc                                                       >  2:2068900/1‑93 (MQ=255)

                                     tCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGc                                                       <  1:5737606/93‑1 (MQ=255)

                                      cGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCa                                                      <  1:6978876/93‑1 (MQ=255)

                                       ggTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAg                                                     >  2:533163/1‑93 (MQ=255)

                                        gTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGc                                                    >  2:1976175/1‑93 (MQ=255)

                                        gTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGc                                                    <  2:6725149/93‑1 (MQ=255)

                                        gTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGc                                                    >  1:7316343/1‑93 (MQ=255)

                                        gTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGc                                                    <  1:4085251/93‑1 (MQ=255)

                                         tATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCt                                                   >  1:6749723/1‑93 (MQ=255)

                                          aTTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTg                                                  >  1:1036771/1‑93 (MQ=255)

                                           ttCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTgg                                                 <  1:2399454/93‑1 (MQ=255)

                                           ttCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTgg                                                 >  1:3534299/1‑93 (MQ=255)

                                           ttCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTgg                                                 >  2:7165474/1‑93 (MQ=255)

                                            tCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGa                                                >  2:5880690/1‑93 (MQ=255)

                                              aTGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAAt                                              >  1:6400030/1‑93 (MQ=255)

                                               tGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATc                                             <  1:6598570/93‑1 (MQ=255)

                                               tGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTCCCAACGCGTCAGCATTATTAATGCAGCTGGAATc                                             >  1:5794563/1‑93 (MQ=255)

                                                 ccGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATcac                                           >  1:4893714/1‑93 (MQ=255)

                                                 ccGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATcac                                           <  2:3312882/93‑1 (MQ=255)

                                                    gcgcTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATcaccac                                        <  1:2497612/93‑1 (MQ=255)

                                                    gcgcTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATcaccac                                        <  1:4514600/93‑1 (MQ=255)

                                                    gcgcTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATcaccac                                        <  1:1890181/93‑1 (MQ=255)

                                                     cgcTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACt                                       >  1:433111/1‑93 (MQ=255)

                                                      gcTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTc                                      <  2:6384596/93‑1 (MQ=255)

                                                      gcTAATGATGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTc                                      >  1:369196/1‑93 (MQ=255)

                                                        tAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGa                                    >  1:1353626/1‑93 (MQ=255)

                                                         aaTGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGaa                                   <  2:3997237/93‑1 (MQ=255)

                                                           tgctgcCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAg                                 <  2:4553474/93‑1 (MQ=255)

                                                                cccTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGa                            <  2:5895504/93‑1 (MQ=255)

                                                                 ccTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGAt                           <  2:1241139/93‑1 (MQ=255)

                                                                  cTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATg                          >  2:635889/1‑93 (MQ=255)

                                                                  cTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATg                          >  2:70885/1‑93 (MQ=255)

                                                                     tCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCa                       <  2:191806/93‑1 (MQ=255)

                                                                      ccccGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAg                      >  1:5045775/1‑93 (MQ=255)

                                                                      ccccGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAg                      <  2:1044747/93‑1 (MQ=255)

                                                                      ccccGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGAGTGATGGCAg                      <  2:1477170/93‑1 (MQ=255)

                                                                       cccGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAgc                     <  2:1794347/93‑1 (MQ=255)

                                                                       cccGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAgc                     >  1:6138810/1‑93 (MQ=255)

                                                                        ccGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAgcg                    <  1:2893583/93‑1 (MQ=255)

                                                                        ccGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAgcg                    >  2:1128705/1‑93 (MQ=255)

                                                                        ccGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAgcg                    >  2:6889650/1‑93 (MQ=255)

                                                                            cgcTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGa                >  2:5044104/1‑93 (MQ=255)

                                                                            cgcTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGa                <  2:355667/93‑1 (MQ=255)

                                                                             gcTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGaa               >  2:7375050/1‑93 (MQ=255)

                                                                              cTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGaaa              >  1:1282182/1‑93 (MQ=255)

                                                                              cTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGaaa              >  1:745168/1‑93 (MQ=255)

                                                                               tggtggAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGaaaa             >  1:3104705/1‑93 (MQ=255)

                                                                               tggtggAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGaaaa             <  2:5181865/93‑1 (MQ=255)

                                                                                 gtggAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATc           >  1:6013875/1‑93 (MQ=255)

                                                                                  tggAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCg          >  1:3212832/1‑93 (MQ=255)

                                                                                   ggAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGc         <  1:828412/93‑1 (MQ=255)

                                                                                     aaGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGccc       <  1:7074253/93‑1 (MQ=255)

                                                                                     aaGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGccc       <  2:2438448/93‑1 (MQ=255)

                                                                                      aGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCa      >  2:4957581/1‑93 (MQ=255)

                                                                                       gcgcAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCAt     >  1:546167/1‑93 (MQ=255)

GCGCTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATCAA  >  NC_000913/3935211‑3935393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GGCGCTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATCAAAA  >  NC_000913/3935210‑3935395

GGCGCTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAG                                                                                              >  SRR4302542.1952565/1‑94 (MQ=60)

  CGCTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCG                                                                                            >  SRR4302542.6930573/1‑94 (MQ=60)

  CGCTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCG                                                                                            >  SRR4302542.1809915/1‑94 (MQ=60)

  CGCTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCG                                                                                            >  SRR4302542.4017412/1‑94 (MQ=60)

   GCTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGT                                                                                           >  SRR4302542.1306721/1‑94 (MQ=60)

   GCTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGT                                                                                           >  SRR4302542.2710942/1‑94 (MQ=60)

   GCTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGT                                                                                           >  SRR4302542.14370/1‑94 (MQ=60)

    CTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTG                                                                                          >  SRR4302542.2710416/1‑94 (MQ=60)

      GATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAG                                                                                        <  SRR4302542.273623/94‑1 (MQ=60)

      GATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAG                                                                                        <  SRR4302542.5646878/94‑1 (MQ=60)

      GATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAG                                                                                        <  SRR4302542.6502705/94‑1 (MQ=60)

       ATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGC                                                                                       >  SRR4302542.7189887/1‑94 (MQ=60)

       ATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGC                                                                                       >  SRR4302542.7210444/1‑94 (MQ=60)

       ATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGC                                                                                       >  SRR4302542.7320737/1‑94 (MQ=60)

       ATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGC                                                                                       <  SRR4302542.5892223/94‑1 (MQ=60)

        TTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCG                                                                                      >  SRR4302542.3852396/1‑94 (MQ=60)

        TTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCG                                                                                      >  SRR4302542.1304568/1‑94 (MQ=60)

         TTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGT                                                                                     >  SRR4302542.841765/1‑94 (MQ=60)

           TTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTAT                                                                                   <  SRR4302542.2833559/94‑1 (MQ=60)

             GTTAATGGGGAAGGTGAGAATGTCATCGGTATTCATGCTGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTG                                                                                 <  SRR4302542.4597131/94‑1 (MQ=60)

             GTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTG                                                                                 >  SRR4302542.3649098/1‑94 (MQ=60)

               TAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCC                                                                               <  SRR4302542.5007433/94‑1 (MQ=60)

                AATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCA                                                                              >  SRR4302542.1656589/1‑94 (MQ=60)

                 ATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAA                                                                             >  SRR4302542.4315652/1‑94 (MQ=60)

                 ATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAA                                                                             >  SRR4302542.6168793/1‑94 (MQ=60)

                 ATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCCGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAA                                                                             <  SRR4302542.5901158/94‑1 (MQ=60)

                  TGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAAC                                                                            <  SRR4302542.3510771/94‑1 (MQ=60)

                  TGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAAC                                                                            <  SRR4302542.5523929/94‑1 (MQ=60)

                  TGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAAC                                                                            <  SRR4302542.5921008/94‑1 (MQ=60)

                  TGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAAC                                                                            <  SRR4302542.6325762/94‑1 (MQ=60)

                  TGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAAC                                                                            <  SRR4302542.2352511/94‑1 (MQ=60)

                  TGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAAC                                                                            <  SRR4302542.407279/94‑1 (MQ=60)

                  TGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAAC                                                                            <  SRR4302542.4695408/94‑1 (MQ=60)

                  TGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAAC                                                                            <  SRR4302542.2494504/94‑1 (MQ=60)

                   GGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACG                                                                           >  SRR4302542.352908/1‑94 (MQ=60)

                    GCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGC                                                                          <  SRR4302542.4822622/94‑1 (MQ=60)

                     CGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCG                                                                         <  SRR4302542.7126069/94‑1 (MQ=60)

                     CGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCG                                                                         >  SRR4302542.2229786/1‑94 (MQ=60)

                     CGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCG                                                                         >  SRR4302542.5875778/1‑94 (MQ=60)

                        AGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCA                                                                      >  SRR4302542.446157/1‑94 (MQ=60)

                         GGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAG                                                                     <  SRR4302542.5460187/94‑1 (MQ=60)

                         GGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAG                                                                     <  SRR4302542.4545208/94‑1 (MQ=60)

                         GGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAG                                                                     <  SRR4302542.4545334/94‑1 (MQ=60)

                         GGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAG                                                                     <  SRR4302542.1770803/94‑1 (MQ=60)

                          GTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGC                                                                    >  SRR4302542.1497747/1‑94 (MQ=60)

                          GTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGC                                                                    <  SRR4302542.2037490/94‑1 (MQ=60)

                            GAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCAT                                                                  >  SRR4302542.5576589/1‑94 (MQ=60)

                             AGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATT                                                                 >  SRR4302542.2861209/1‑94 (MQ=60)

                               AATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTAT                                                               <  SRR4302542.6380500/94‑1 (MQ=60)

                               AATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTAT                                                               >  SRR4302542.1266786/1‑94 (MQ=60)

                                ATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATT                                                              >  SRR4302542.1940233/1‑94 (MQ=60)

                                ATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATT                                                              <  SRR4302542.211367/94‑1 (MQ=60)

                                 TGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTA                                                             <  SRR4302542.2736651/94‑1 (MQ=60)

                                  GTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAA                                                            >  SRR4302542.6490961/1‑94 (MQ=60)

                                  GTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAA                                                            >  SRR4302542.776866/1‑94 (MQ=60)

                                   TCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAAT                                                           <  SRR4302542.3150813/94‑1 (MQ=60)

                                   TCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAAT                                                           >  SRR4302542.7228898/1‑94 (MQ=60)

                                   TCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAAT                                                           <  SRR4302542.2211897/94‑1 (MQ=60)

                                   TCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAAT                                                           <  SRR4302542.7578467/94‑1 (MQ=60)

                                   TCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAAT                                                           >  SRR4302542.6974059/1‑94 (MQ=60)

                                   TCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAAT                                                           <  SRR4302542.6840992/94‑1 (MQ=60)

                                    CATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATG                                                          <  SRR4302542.1369413/94‑1 (MQ=60)

                                     ATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGC                                                         >  SRR4302542.2859816/1‑94 (MQ=60)

                                     ATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGC                                                         >  SRR4302542.2162251/1‑94 (MQ=60)

                                      TCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCA                                                        <  SRR4302542.5989394/94‑1 (MQ=60)

                                      TCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCA                                                        <  SRR4302542.5793315/94‑1 (MQ=60)

                                      TCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCA                                                        >  SRR4302542.6002098/1‑94 (MQ=60)

                                       CGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAG                                                       >  SRR4302542.2395894/1‑94 (MQ=60)

                                       CGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAG                                                       <  SRR4302542.7047424/94‑1 (MQ=60)

                                       CGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAG                                                       >  SRR4302542.6478379/1‑94 (MQ=60)

                                        GGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCTGCCCGGGTGGCAGCTCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGC                                                      >  SRR4302542.6618454/1‑94 (MQ=60)

                                        GGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGC                                                      >  SRR4302542.7388013/1‑94 (MQ=60)

                                        GGTAGTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGC                                                      >  SRR4302542.7037806/1‑94 (MQ=60)

                                         GTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCT                                                     <  SRR4302542.4125509/94‑1 (MQ=60)

                                         GTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCT                                                     >  SRR4302542.6116441/1‑94 (MQ=60)

                                         GTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCT                                                     >  SRR4302542.6816134/1‑94 (MQ=60)

                                          TATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTG                                                    <  SRR4302542.5825837/94‑1 (MQ=60)

                                          TATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTG                                                    >  SRR4302542.1045682/1‑94 (MQ=60)

                                          TATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGTGTCAGCATTATTAATGCAGCTG                                                    <  SRR4302542.7446892/94‑1 (MQ=60)

                                           ATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGG                                                   >  SRR4302542.3567332/1‑94 (MQ=60)

                                           ATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGG                                                   >  SRR4302542.836217/1‑94 (MQ=60)

                                            TTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGA                                                  <  SRR4302542.2422775/94‑1 (MQ=60)

                                              CATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAAT                                                <  SRR4302542.6363527/94‑1 (MQ=60)

                                              CATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAAT                                                >  SRR4302542.6463094/1‑94 (MQ=60)

                                              CATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAAT                                                <  SRR4302542.5753284/94‑1 (MQ=60)

                                               ATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTCCCAACGCGTCAGCATTATTAATGCAGCTGGAATC                                               >  SRR4302542.5850805/1‑94 (MQ=60)

                                               ATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATC                                               <  SRR4302542.6163625/94‑1 (MQ=60)

                                                TGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCA                                              <  SRR4302542.4349459/94‑1 (MQ=60)

                                                TGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCA                                              <  SRR4302542.6663580/94‑1 (MQ=60)

                                                 GCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCAC                                             <  SRR4302542.4933132/94‑1 (MQ=60)

                                                 GCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCAC                                             >  SRR4302542.4941296/1‑94 (MQ=60)

                                                 GCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCAC                                             <  SRR4302542.6557206/94‑1 (MQ=60)

                                                     GCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACT                                         <  SRR4302542.1253840/94‑1 (MQ=60)

                                                     GCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACT                                         <  SRR4302542.2521832/94‑1 (MQ=60)

                                                     GCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACT                                         <  SRR4302542.1906537/94‑1 (MQ=60)

                                                     GCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACT                                         >  SRR4302542.436861/1‑94 (MQ=60)

                                                     GCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACT                                         <  SRR4302542.4558840/94‑1 (MQ=60)

                                                      CGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTC                                        >  SRR4302542.2750149/1‑94 (MQ=60)

                                                      CGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTC                                        >  SRR4302542.7050165/1‑94 (MQ=60)

                                                      CGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTC                                        <  SRR4302542.5817719/94‑1 (MQ=60)

                                                      CGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTC                                        >  SRR4302542.4100742/1‑94 (MQ=60)

                                                      CGCTAATGATGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTC                                        >  SRR4302542.372408/1‑94 (MQ=60)

                                                       GCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCG                                       >  SRR4302542.4678214/1‑94 (MQ=60)

                                                       GCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCG                                       >  SRR4302542.6733561/1‑94 (MQ=60)

                                                       GCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCG                                       <  SRR4302542.6927787/94‑1 (MQ=60)

                                                        CTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGA                                      >  SRR4302542.1365319/1‑94 (MQ=60)

                                                        CTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGA                                      >  SRR4302542.3394480/1‑94 (MQ=60)

                                                        CTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGA                                      >  SRR4302542.4083886/1‑94 (MQ=60)

                                                         TAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAA                                     <  SRR4302542.3859748/94‑1 (MQ=60)

                                                           ATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAG                                   >  SRR4302542.2940854/1‑94 (MQ=60)

                                                           ATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAG                                   >  SRR4302542.3423461/1‑94 (MQ=60)

                                                            TGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGT                                  >  SRR4302542.5120893/1‑94 (MQ=60)

                                                            TGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGT                                  >  SRR4302542.2450053/1‑94 (MQ=60)

                                                            TGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGT                                  <  SRR4302542.1916633/94‑1 (MQ=60)

                                                              CTGCCCTTTCCCCGGCGCTGGTGGGAGCGGAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGT                                >  SRR4302542.2420624/1‑94 (MQ=60)

                                                                 CCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGAT                             <  SRR4302542.1357648/94‑1 (MQ=60)

                                                                  CCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATG                            <  SRR4302542.3570473/94‑1 (MQ=60)

                                                                  CCTTTCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATG                            <  SRR4302542.3105570/94‑1 (MQ=60)

                                                                  CCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATG                            <  SRR4302542.3116652/94‑1 (MQ=60)

                                                                   CTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGG                           <  SRR4302542.183575/94‑1 (MQ=60)

                                                                      TCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAG                        >  SRR4302542.7331086/1‑94 (MQ=60)

                                                                      TCCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAG                        >  SRR4302542.5094757/1‑94 (MQ=60)

                                                                      TCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAG                        <  SRR4302542.6906271/94‑1 (MQ=60)

                                                                       CCCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGC                       >  SRR4302542.6198205/1‑94 (MQ=60)

                                                                        CCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCG                      <  SRR4302542.3205085/94‑1 (MQ=60)

                                                                        CCCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCG                      <  SRR4302542.4416026/94‑1 (MQ=60)

                                                                         CCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGG                     <  SRR4302542.867507/94‑1 (MQ=60)

                                                                         CCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGG                     <  SRR4302542.2921358/94‑1 (MQ=60)

                                                                         CCGGCGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGG                     >  SRR4302542.1409750/1‑94 (MQ=60)

                                                                             CGCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAA                 <  SRR4302542.2071659/94‑1 (MQ=60)

                                                                             CGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAA                 <  SRR4302542.7453374/94‑1 (MQ=60)

                                                                              GCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAA                >  SRR4302542.751621/1‑94 (MQ=60)

                                                                              GCTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAA                >  SRR4302542.1293219/1‑94 (MQ=60)

                                                                               CTGGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAA               >  SRR4302542.3134212/1‑94 (MQ=60)

                                                                                 GGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATC             <  SRR4302542.6754372/94‑1 (MQ=60)

                                                                                 GGTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATC             >  SRR4302542.6072112/1‑94 (MQ=60)

                                                                                  GTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCG            >  SRR4302542.3243243/1‑94 (MQ=60)

                                                                                  GTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCG            <  SRR4302542.5419138/94‑1 (MQ=60)

                                                                                  GTGGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCG            >  SRR4302542.5921308/1‑94 (MQ=60)

                                                                                    GGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCC          >  SRR4302542.2082084/1‑94 (MQ=60)

                                                                                    GGAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCC          <  SRR4302542.835569/94‑1 (MQ=60)

                                                                                     GAAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCC         <  SRR4302542.600246/94‑1 (MQ=60)

                                                                                      AAGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCA        <  SRR4302542.7143679/94‑1 (MQ=60)

                                                                                       AGCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCAT       <  SRR4302542.4972459/94‑1 (MQ=60)

                                                                                       AGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCAT       >  SRR4302542.550884/1‑94 (MQ=60)

                                                                                        GCGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATC      <  SRR4302542.3520417/94‑1 (MQ=60)

                                                                                         CGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATCA     >  SRR4302542.4547931/1‑94 (MQ=60)

                                                                                         CGCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATCA     <  SRR4302542.6381906/94‑1 (MQ=60)

                                                                                          GCAGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATCAA    <  SRR4302542.568819/94‑1 (MQ=60)

                                                                                           CAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATCAAA   <  SRR4302542.6416299/94‑1 (MQ=60)

                                                                                            AGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATCAAAA  >  SRR4302542.2733924/1‑94 (MQ=60)

                                                                                            AGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATCAAAA  >  SRR4302542.5387447/1‑94 (MQ=60)

                                                                                            AGCGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATCAAAA  >  SRR4302542.3314611/1‑94 (MQ=60)

GGCGCTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATCAAAA  >  NC_000913/3935210‑3935395

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`