Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,937,900 G→A G113G (GGC→GGT)  yieO ← putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,937,9000GA82.1% 735.2 / 118.5 302G113G (GGC→GGT) yieOputative transport protein
Reads supporting (aligned to +/- strand):  ref base G (30/24);  new base A (142/105);  total (172/130)
Fisher's exact test for biased strand distribution p-value = 8.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.02e-01

Only 100 of 313 total aligned reads displayed.

CCGGCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACT  >  NC_000913/3937809‑3937989
                                                                                           |                                                                                         
   gCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGcgccgc                                                                                       >  1:4576308/1‑93 (MQ=255)
   gCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGcgccgc                                                                                       >  1:98689/1‑93 (MQ=255)
   gCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGcaccgc                                                                                       >  2:7397976/1‑93 (MQ=255)
      tGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTa                                                                                    >  2:2997997/1‑93 (MQ=255)
      tGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTa                                                                                    >  2:5464068/1‑93 (MQ=255)
      tGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTa                                                                                    <  2:5074559/93‑1 (MQ=255)
        gCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATc                                                                                  >  2:7181965/1‑93 (MQ=255)
        gCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATc                                                                                  <  2:6398140/93‑1 (MQ=255)
          gACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATccc                                                                                >  1:5108629/1‑93 (MQ=255)
          gACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATccc                                                                                >  2:5610407/1‑93 (MQ=255)
           aCAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATcccc                                                                               <  1:3239832/93‑1 (MQ=255)
           aCAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATcccc                                                                               >  1:653388/1‑93 (MQ=255)
           aCAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATcccc                                                                               >  2:5316229/1‑93 (MQ=255)
            cAAAATTCAATCCTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCt                                                                              <  1:6013641/93‑1 (MQ=255)
            cAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCt                                                                              >  2:5821140/1‑93 (MQ=255)
            cAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCt                                                                              >  2:7516142/1‑93 (MQ=255)
            cAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCt                                                                              <  1:5697073/93‑1 (MQ=255)
               aaTTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGaa                                                                           >  1:7291763/1‑93 (MQ=255)
               aaTTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGaa                                                                           >  1:4293669/1‑93 (MQ=255)
                 ttCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATa                                                                         >  1:5403300/1‑93 (MQ=255)
                 ttCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATa                                                                         >  2:4130968/1‑93 (MQ=255)
                        cTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGa                                                                  <  2:1816272/93‑1 (MQ=255)
                         tGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGaa                                                                 >  1:3993172/1‑93 (MQ=255)
                          ggAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAg                                                                >  1:6297723/1‑93 (MQ=255)
                           gaagaaGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGa                                                               <  1:2568134/93‑1 (MQ=255)
                           gaagaaGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGa                                                               >  2:1531643/1‑93 (MQ=255)
                            aagaagTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGAc                                                              >  1:2489713/1‑93 (MQ=255)
                            aagaagTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGAc                                                              <  2:6901542/93‑1 (MQ=255)
                            aagaagTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGAc                                                              >  1:3329257/1‑93 (MQ=255)
                             agaagTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACa                                                             >  1:6079922/1‑93 (MQ=255)
                             agaagTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACa                                                             >  2:2902674/1‑93 (MQ=255)
                             agaagTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACa                                                             >  1:839317/1‑93 (MQ=255)
                             agaagTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACa                                                             <  2:4221780/93‑1 (MQ=255)
                             agaagTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACa                                                             <  1:4827517/93‑1 (MQ=255)
                               aagTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAAc                                                           <  1:210468/93‑1 (MQ=255)
                                agTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAAcc                                                          >  2:4270507/1‑93 (MQ=255)
                                 gTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGTAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCa                                                         >  1:6216147/1‑93 (MQ=255)
                                    cATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCt                                                      >  2:5755002/1‑93 (MQ=255)
                                    cATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCt                                                      <  2:2461456/93‑1 (MQ=255)
                                     aTTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCtg                                                     >  1:6717878/1‑93 (MQ=255)
                                     aTTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCtg                                                     >  2:1374144/1‑93 (MQ=255)
                                      ttACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCtgt                                                    <  2:1481933/93‑1 (MQ=255)
                                         cGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGt                                                 >  2:3666081/1‑93 (MQ=255)
                                           aGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAg                                               >  2:4869073/1‑93 (MQ=255)
                                           aGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAg                                               >  2:4687164/1‑93 (MQ=255)
                                            ggATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGc                                              >  2:1200153/1‑93 (MQ=255)
                                            ggATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGc                                              <  1:3268125/93‑1 (MQ=255)
                                            ggATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGc                                              <  2:4363681/93‑1 (MQ=255)
                                            ggATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGc                                              >  2:4754730/1‑93 (MQ=255)
                                             gATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCg                                             >  1:1012251/1‑93 (MQ=255)
                                              aTAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGa                                            >  2:6820261/1‑93 (MQ=255)
                                               tAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGaa                                           >  2:1980558/1‑93 (MQ=255)
                                               tAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGaa                                           <  2:3505364/93‑1 (MQ=255)
                                               tAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGaa                                           <  2:2629651/93‑1 (MQ=255)
                                                aaGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAAt                                          <  2:5176156/93‑1 (MQ=255)
                                                aaGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAAt                                          <  2:6705055/93‑1 (MQ=255)
                                                  gcgcgcAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTa                                        <  2:5277996/93‑1 (MQ=255)
                                                  gcgcgcAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTa                                        <  1:6990797/93‑1 (MQ=255)
                                                  gcgcgcAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTa                                        <  1:4915034/93‑1 (MQ=255)
                                                   cgcgcAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAg                                       <  1:2800835/93‑1 (MQ=255)
                                                    gcgcAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGa                                      >  1:2670706/1‑93 (MQ=255)
                                                    gcgcAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGa                                      >  1:3406479/1‑93 (MQ=255)
                                                    gcgcAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGa                                      <  2:3299954/93‑1 (MQ=255)
                                                      gcAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGaaa                                    <  1:1425134/93‑1 (MQ=255)
                                                      gcAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGaaa                                    <  2:1960880/93‑1 (MQ=255)
                                                       cAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAg                                   <  2:5905100/93‑1 (MQ=255)
                                                        aGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGt                                  <  1:162624/93‑1 (MQ=255)
                                                         gTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTg                                 <  1:6933301/93‑1 (MQ=255)
                                                          tAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTgc                                >  2:605624/1‑93 (MQ=255)
                                                            aGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTgcgc                              <  1:4767753/93‑1 (MQ=255)
                                                            aGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTgcgc                              >  1:290526/1‑93 (MQ=255)
                                                             ggCCAGCCGAGCAACGGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCa                             >  1:5550550/1‑93 (MQ=255)
                                                              nncAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAg                            <  1:1743701/91‑1 (MQ=255)
                                                              gCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAg                            <  1:2264926/93‑1 (MQ=255)
                                                                cAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAgnn                          >  1:1975110/1‑91 (MQ=255)
                                                                cAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGc                          >  1:3549888/1‑93 (MQ=255)
                                                                    cGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCaga                      <  2:2212087/93‑1 (MQ=255)
                                                                    cGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCaga                      >  2:7338476/1‑93 (MQ=255)
                                                                     gAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCagag                     >  1:4406841/1‑93 (MQ=255)
                                                                       gCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGaa                   <  1:3034346/93‑1 (MQ=255)
                                                                       gCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGaa                   >  1:5873434/1‑93 (MQ=255)
                                                                         aaCAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAAcc                 >  2:2042363/1‑93 (MQ=255)
                                                                          aCAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAAccc                >  1:4729728/1‑93 (MQ=255)
                                                                             ggCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAAt             >  1:6404908/1‑93 (MQ=255)
                                                                             ggCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAAt             >  2:6218216/1‑93 (MQ=255)
                                                                             ggCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAAt             >  1:7405761/1‑93 (MQ=255)
                                                                             ggCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAAt             >  1:1540049/1‑93 (MQ=255)
                                                                             ggCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAAt             >  2:4573533/1‑93 (MQ=255)
                                                                              gCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAAtg            <  2:3162516/93‑1 (MQ=255)
                                                                              gCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAAtg            <  2:4024692/93‑1 (MQ=255)
                                                                               catcatcatTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAAtgt           <  2:3855305/93‑1 (MQ=255)
                                                                                 tcataatTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGa         <  1:3653830/93‑1 (MQ=255)
                                                                                  catcatTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGaa        >  2:5229020/1‑93 (MQ=255)
                                                                                   atcatTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAAc       >  2:2400089/1‑93 (MQ=255)
                                                                                    tcatTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACa      >  2:1110727/1‑93 (MQ=255)
                                                                                      atTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGa    <  1:735703/93‑1 (MQ=255)
                                                                                      atTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGa    >  2:7000212/1‑93 (MQ=255)
                                                                                       ttGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGAc   >  1:5783594/1‑93 (MQ=255)
                                                                                       ttGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGAc   >  2:6587249/1‑93 (MQ=255)
                                                                                        tGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACt  >  1:4181281/1‑93 (MQ=255)
                                                                                           |                                                                                         
CCGGCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACT  >  NC_000913/3937809‑3937989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACCCGGCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACTCACG  >  NC_000913/3937807‑3937993
                                                                                             |                                                                                             
ACCCGGCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCA                                                                                               <  SRR4302542.86150/94‑1 (MQ=60)
 CCCGGCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCAC                                                                                              >  SRR4302542.526682/1‑94 (MQ=60)
  CCGGCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACC                                                                                             <  SRR4302542.2903316/94‑1 (MQ=60)
  CCGGCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACC                                                                                             <  SRR4302542.6924175/94‑1 (MQ=60)
    GGCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGC                                                                                           >  SRR4302542.4621077/1‑94 (MQ=60)
    GGCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGC                                                                                           >  SRR4302542.99522/1‑94 (MQ=60)
     GCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCC                                                                                          <  SRR4302542.6219037/94‑1 (MQ=60)
      CATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCT                                                                                         >  SRR4302542.2865961/1‑94 (MQ=60)
      CATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCT                                                                                         >  SRR4302542.2320847/1‑94 (MQ=60)
      CATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCT                                                                                         >  SRR4302542.7307138/1‑94 (MQ=60)
       ATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTA                                                                                        >  SRR4302542.327619/1‑94 (MQ=60)
       ATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTA                                                                                        <  SRR4302542.2862390/94‑1 (MQ=60)
        TGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTAT                                                                                       <  SRR4302542.4906062/94‑1 (MQ=60)
          GCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCC                                                                                     <  SRR4302542.2031752/94‑1 (MQ=60)
           CGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCC                                                                                    >  SRR4302542.2180826/1‑94 (MQ=60)
           CGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCC                                                                                    >  SRR4302542.5158249/1‑94 (MQ=60)
           CGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCC                                                                                    >  SRR4302542.2738359/1‑94 (MQ=60)
            GACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCC                                                                                   >  SRR4302542.658994/1‑94 (MQ=60)
             ACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCT                                                                                  <  SRR4302542.3270458/94‑1 (MQ=60)
              CAAAATTCAATCCTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTG                                                                                 <  SRR4302542.6071877/94‑1 (MQ=60)
              CAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTG                                                                                 <  SRR4302542.5752375/94‑1 (MQ=60)
               AAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGA                                                                                >  SRR4302542.3054719/1‑94 (MQ=60)
                AAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAA                                                                               >  SRR4302542.339289/1‑94 (MQ=60)
                AAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAA                                                                               >  SRR4302542.7363236/1‑94 (MQ=60)
                AAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAA                                                                               >  SRR4302542.4335901/1‑94 (MQ=60)
                AAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAA                                                                               >  SRR4302542.834475/1‑94 (MQ=60)
                  ATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATA                                                                             >  SRR4302542.5455789/1‑94 (MQ=60)
                  ATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATA                                                                             >  SRR4302542.5686298/1‑94 (MQ=60)
                  ATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATA                                                                             >  SRR4302542.6373817/1‑94 (MQ=60)
                  ATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATA                                                                             >  SRR4302542.3159537/1‑94 (MQ=60)
                  ATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATA                                                                             >  SRR4302542.6358465/1‑94 (MQ=60)
                  ATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATA                                                                             >  SRR4302542.2285285/1‑94 (MQ=60)
                    TCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAAC                                                                           <  SRR4302542.5562107/94‑1 (MQ=60)
                     CAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACC                                                                          >  SRR4302542.4932222/1‑94 (MQ=60)
                       ATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCG                                                                        >  SRR4302542.570402/1‑94 (MQ=60)
                       ATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCG                                                                        >  SRR4302542.3454759/1‑94 (MQ=60)
                       ATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCG                                                                        >  SRR4302542.5777327/1‑94 (MQ=60)
                         ACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGA                                                                      >  SRR4302542.2623505/1‑94 (MQ=60)
                          CTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAA                                                                     >  SRR4302542.4032566/1‑94 (MQ=60)
                           TGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAG                                                                    >  SRR4302542.6359770/1‑94 (MQ=60)
                           TGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAG                                                                    <  SRR4302542.1883468/94‑1 (MQ=60)
                             GAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGAC                                                                  <  SRR4302542.2593017/94‑1 (MQ=60)
                             GAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGAC                                                                  >  SRR4302542.2513866/1‑94 (MQ=60)
                             GAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGAC                                                                  <  SRR4302542.4239133/94‑1 (MQ=60)
                             GAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGAC                                                                  >  SRR4302542.3360594/1‑94 (MQ=60)
                              AAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACA                                                                 <  SRR4302542.4193519/94‑1 (MQ=60)
                              AAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACA                                                                 >  SRR4302542.6138792/1‑94 (MQ=60)
                              AAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACA                                                                 >  SRR4302542.846572/1‑94 (MQ=60)
                               AGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAA                                                                <  SRR4302542.4874559/94‑1 (MQ=60)
                                GAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAAC                                                               >  SRR4302542.6060130/1‑94 (MQ=60)
                                 AAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACC                                                              >  SRR4302542.7053469/1‑94 (MQ=60)
                                 AAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACC                                                              <  SRR4302542.212282/94‑1 (MQ=60)
                                  AGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGTAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCA                                                             >  SRR4302542.6277380/1‑94 (MQ=60)
                                  AGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCA                                                             <  SRR4302542.3390898/94‑1 (MQ=60)
                                  AGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCA                                                             <  SRR4302542.4850383/94‑1 (MQ=60)
                                    TTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGC                                                           >  SRR4302542.4607/1‑94 (MQ=60)
                                    TTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGC                                                           >  SRR4302542.5108713/1‑94 (MQ=60)
                                    TTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGC                                                           >  SRR4302542.5376468/1‑94 (MQ=60)
                                     TCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCT                                                          >  SRR4302542.2534141/1‑94 (MQ=60)
                                      CATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTG                                                         >  SRR4302542.2632632/1‑94 (MQ=60)
                                      CATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTG                                                         >  SRR4302542.6784039/1‑94 (MQ=60)
                                      CATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTG                                                         >  SRR4302542.745503/1‑94 (MQ=60)
                                       ATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGT                                                        >  SRR4302542.3293154/1‑94 (MQ=60)
                                       ATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGT                                                        >  SRR4302542.6390594/1‑94 (MQ=60)
                                       ATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGT                                                        >  SRR4302542.980228/1‑94 (MQ=60)
                                        TTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTG                                                       <  SRR4302542.1760808/94‑1 (MQ=60)
                                         TACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGG                                                      <  SRR4302542.1541812/94‑1 (MQ=60)
                                         TACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGG                                                      >  SRR4302542.1750151/1‑94 (MQ=60)
                                         TACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGG                                                      <  SRR4302542.3624976/94‑1 (MQ=60)
                                          ACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGT                                                     >  SRR4302542.3057407/1‑94 (MQ=60)
                                           CGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTA                                                    <  SRR4302542.1665746/94‑1 (MQ=60)
                                           CGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTA                                                    <  SRR4302542.5964919/94‑1 (MQ=60)
                                            GAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAG                                                   >  SRR4302542.7391041/1‑94 (MQ=60)
                                            GAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAG                                                   <  SRR4302542.5564545/94‑1 (MQ=60)
                                              GGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCG                                                 <  SRR4302542.3298977/94‑1 (MQ=60)
                                              GGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCG                                                 <  SRR4302542.2428456/94‑1 (MQ=60)
                                              GGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCG                                                 >  SRR4302542.1020970/1‑94 (MQ=60)
                                               GATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGA                                                <  SRR4302542.4379974/94‑1 (MQ=60)
                                                  AAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATT                                             >  SRR4302542.4807116/1‑94 (MQ=60)
                                                   AGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTA                                            <  SRR4302542.461352/94‑1 (MQ=60)
                                                    GCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAG                                           <  SRR4302542.7059467/94‑1 (MQ=60)
                                                    GCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAG                                           <  SRR4302542.4962829/94‑1 (MQ=60)
                                                     CGCGCATGAAGGCCAGCCGAACAACAGGCATCATCATTGCTCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGA                                          <  SRR4302542.4793283/94‑1 (MQ=60)
                                                     CGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGA                                          >  SRR4302542.3438412/1‑94 (MQ=60)
                                                     CGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGA                                          >  SRR4302542.610024/1‑94 (MQ=60)
                                                     CGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGA                                          <  SRR4302542.6751281/94‑1 (MQ=60)
                                                     CGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGA                                          <  SRR4302542.2827808/94‑1 (MQ=60)
                                                     CGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGA                                          >  SRR4302542.2696478/1‑94 (MQ=60)
                                                       CGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAA                                        <  SRR4302542.4092692/94‑1 (MQ=60)
                                                        GCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAG                                       <  SRR4302542.6737933/94‑1 (MQ=60)
                                                        GCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAG                                       <  SRR4302542.1437471/94‑1 (MQ=60)
                                                        GCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAG                                       >  SRR4302542.7545465/1‑94 (MQ=60)
                                                         CAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGT                                      <  SRR4302542.3197287/94‑1 (MQ=60)
                                                         CAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGT                                      >  SRR4302542.2553234/1‑94 (MQ=60)
                                                          AGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTG                                     >  SRR4302542.1257288/1‑94 (MQ=60)
                                                          AGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTG                                     >  SRR4302542.3310746/1‑94 (MQ=60)
                                                          AGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTG                                     <  SRR4302542.164002/94‑1 (MQ=60)
                                                           GTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGC                                    <  SRR4302542.7001373/94‑1 (MQ=60)
                                                           GTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGC                                    >  SRR4302542.6970090/1‑94 (MQ=60)
                                                           GTAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGC                                    >  SRR4302542.6970089/1‑94 (MQ=60)
                                                            TAAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCG                                   >  SRR4302542.5516717/1‑94 (MQ=60)
                                                             AAGGCCAGCCGGGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGC                                  >  SRR4302542.4849528/1‑94 (MQ=60)
                                                             AAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGC                                  >  SRR4302542.5911484/1‑94 (MQ=60)
                                                             AAGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGC                                  >  SRR4302542.293064/1‑94 (MQ=60)
                                                              AGGCCAGCCGAGCAACGGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCA                                 >  SRR4302542.5604484/1‑94 (MQ=60)
                                                              AGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCA                                 <  SRR4302542.4577258/94‑1 (MQ=60)
                                                              AGGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCA                                 <  SRR4302542.4814227/94‑1 (MQ=60)
                                                               GGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAG                                <  SRR4302542.2742046/94‑1 (MQ=60)
                                                               GGCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAG                                >  SRR4302542.5217082/1‑94 (MQ=60)
                                                                NNCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGG                               <  SRR4302542.1758832/94‑1 (MQ=60)
                                                                GCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGG                               <  SRR4302542.6329003/94‑1 (MQ=60)
                                                                GCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGG                               <  SRR4302542.6502938/94‑1 (MQ=60)
                                                                GCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGG                               <  SRR4302542.978591/94‑1 (MQ=60)
                                                                GCCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGG                               <  SRR4302542.2284415/94‑1 (MQ=60)
                                                                 CCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGNN                              >  SRR4302542.1992170/1‑94 (MQ=60)
                                                                 CCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGC                              <  SRR4302542.3344641/94‑1 (MQ=60)
                                                                 CCAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGC                              >  SRR4302542.3583074/1‑94 (MQ=60)
                                                                  CAGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCC                             <  SRR4302542.1557789/94‑1 (MQ=60)
                                                                   AGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCA                            >  SRR4302542.5041572/1‑94 (MQ=60)
                                                                   AGCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCA                            >  SRR4302542.1567533/1‑94 (MQ=60)
                                                                    GCCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAG                           >  SRR4302542.5868466/1‑94 (MQ=60)
                                                                     CCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGA                          <  SRR4302542.6446041/94‑1 (MQ=60)
                                                                     CCGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGAAGCGAATTAGAAAGTGCGCAGGCCAGA                          >  SRR4302542.7269329/1‑94 (MQ=60)
                                                                      CGAGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAG                         >  SRR4302542.4450118/1‑94 (MQ=60)
                                                                        AGCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAA                       >  SRR4302542.5930375/1‑94 (MQ=60)
                                                                         GCAACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAAC                      <  SRR4302542.3063295/94‑1 (MQ=60)
                                                                           AACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCC                    >  SRR4302542.3609454/1‑94 (MQ=60)
                                                                           AACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCC                    >  SRR4302542.4775854/1‑94 (MQ=60)
                                                                            ACAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCA                   >  SRR4302542.6168186/1‑94 (MQ=60)
                                                                             CAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAA                  >  SRR4302542.2119864/1‑94 (MQ=60)
                                                                             CAGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAA                  >  SRR4302542.4760079/1‑94 (MQ=60)
                                                                              AGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAAT                 >  SRR4302542.6468017/1‑94 (MQ=60)
                                                                              AGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAAT                 >  SRR4302542.1553350/1‑94 (MQ=60)
                                                                              AGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAAT                 <  SRR4302542.7592994/94‑1 (MQ=60)
                                                                              AGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAAT                 >  SRR4302542.2207622/1‑94 (MQ=60)
                                                                              AGGCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAAT                 >  SRR4302542.7478240/1‑94 (MQ=60)
                                                                                GCATGATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGT               >  SRR4302542.7047368/1‑94 (MQ=60)
                                                                                GCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGT               <  SRR4302542.6533783/94‑1 (MQ=60)
                                                                                GCATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTAGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGT               <  SRR4302542.3744470/94‑1 (MQ=60)
                                                                                 CATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTG              >  SRR4302542.3342098/1‑94 (MQ=60)
                                                                                 CATCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTG              <  SRR4302542.393224/94‑1 (MQ=60)
                                                                                   TCATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAA            >  SRR4302542.7446227/1‑94 (MQ=60)
                                                                                   TCATAATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAA            <  SRR4302542.3688024/94‑1 (MQ=60)
                                                                                    CATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAAC           >  SRR4302542.1491164/1‑94 (MQ=60)
                                                                                     ATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACA          >  SRR4302542.4664468/1‑94 (MQ=60)
                                                                                     ATCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACA          >  SRR4302542.4375418/1‑94 (MQ=60)
                                                                                      TCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAG         >  SRR4302542.1429417/1‑94 (MQ=60)
                                                                                      TCATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAG         >  SRR4302542.4267416/1‑94 (MQ=60)
                                                                                       CATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGA        >  SRR4302542.7418796/1‑94 (MQ=60)
                                                                                        ATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGAC       >  SRR4302542.5839751/1‑94 (MQ=60)
                                                                                        ATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGAC       <  SRR4302542.742081/94‑1 (MQ=60)
                                                                                        ATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGAC       <  SRR4302542.6102102/94‑1 (MQ=60)
                                                                                        ATTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGAC       >  SRR4302542.3550799/1‑94 (MQ=60)
                                                                                         TTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACT      >  SRR4302542.4222519/1‑94 (MQ=60)
                                                                                         TTGCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACT      <  SRR4302542.5837943/94‑1 (MQ=60)
                                                                                           GCACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACTCA    <  SRR4302542.2657308/94‑1 (MQ=60)
                                                                                            CACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACTCCC   <  SRR4302542.4920742/94‑1 (MQ=60)
                                                                                            CACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACTCAC   <  SRR4302542.2152109/94‑1 (MQ=60)
                                                                                            CACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACTCAC   >  SRR4302542.5876141/1‑94 (MQ=60)
                                                                                            CACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACTCAC   >  SRR4302542.6879051/1‑94 (MQ=60)
                                                                                             ACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACTCACG  <  SRR4302542.7387403/94‑1 (MQ=60)
                                                                                             ACCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACTCACG  >  SRR4302542.6922854/1‑94 (MQ=60)
                                                                                             |                                                                                             
ACCCGGCATGGCGACAAAATTCAATACTGGAAGAAGTTCATTACGAGGATAAGCGCGCAGTAAGGCCAGCCGAGCAACAGGCATCATCATTGCGCCGCCTATCCCCTGAATAACCCGGAAGACAACCAGCTGTGGTAGCGAATTAGAAAGTGCGCAGGCCAGAGAACCCAATGTGAACAGACTCACG  >  NC_000913/3937807‑3937993

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑