Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,971,075 2 bp→GC coding (942‑943/1068 nt) rffG → dTDP‑glucose 4,6‑dehydratase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,971,0750CG100.0% 1733.6 / NA 508C314W (TGC→TGG) rffGdTDP‑glucose 4,6‑dehydratase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (242/266);  total (242/266)
*NC_0009133,971,0760GC99.8% 1732.4 / ‑4.7 508V315L (GTG→CTG) rffGdTDP‑glucose 4,6‑dehydratase
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (241/266);  total (242/266)
Fisher's exact test for biased strand distribution p-value = 4.76e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.56e-01

Only 100 of 522 total aligned reads displayed.

GTGACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGCG‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGAC  >  NC_000913/3970987‑3971162
                                                                                        ||                                                                                       
 tGACCCGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGcc                                                                                    >  1:6941718/1‑93 (MQ=255)
  gACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCg                                                                                   >  1:527914/1‑93 (MQ=255)
  gACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGACATTGATGATTCGAAAATTGACCGCGAACTTGGCTGGC‑TGCCg                                                                                   >  1:7462500/1‑93 (MQ=255)
     cTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAg                                                                                <  2:579466/93‑1 (MQ=255)
     cTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAg                                                                                <  1:6590707/93‑1 (MQ=255)
     cTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAg                                                                                <  1:1915906/93‑1 (MQ=255)
      tGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAgg                                                                               >  2:668214/1‑93 (MQ=255)
      tGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAgg                                                                               <  2:1203723/93‑1 (MQ=255)
      tGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAgg                                                                               <  2:1273879/93‑1 (MQ=255)
        aTCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGaa                                                                             <  2:4224089/93‑1 (MQ=255)
        aTCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGaa                                                                             >  2:2997219/1‑93 (MQ=255)
        aTCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGaa                                                                             >  1:5669196/1‑93 (MQ=255)
         tCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGaaa                                                                            >  2:5134773/1‑93 (MQ=255)
         tCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGaaa                                                                            <  1:2579414/93‑1 (MQ=255)
         tCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGaaa                                                                            >  1:6749907/1‑93 (MQ=255)
         tCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGaaa                                                                            <  2:7012668/93‑1 (MQ=255)
          cACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAAc                                                                           >  1:6674763/1‑93 (MQ=255)
          cACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAAc                                                                           <  1:2921000/93‑1 (MQ=255)
          cACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAAc                                                                           <  1:5593838/93‑1 (MQ=255)
          cACCTTTGTCGCTGACCGACCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAAc                                                                           >  1:1077701/1‑93 (MQ=255)
            ccTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCt                                                                         >  1:1645766/1‑93 (MQ=255)
            ccTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCt                                                                         >  2:5416331/1‑93 (MQ=255)
             cTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCtt                                                                        >  1:72964/1‑93 (MQ=255)
              tttGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCttt                                                                       <  2:1436869/93‑1 (MQ=255)
              tttGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCttt                                                                       <  1:383609/93‑1 (MQ=255)
              tttGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCttt                                                                       <  2:2297095/93‑1 (MQ=255)
              tttGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCttt                                                                       >  1:4631511/1‑93 (MQ=255)
               ttGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTg                                                                      >  1:49956/1‑93 (MQ=255)
                tGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGa                                                                     <  2:2537266/93‑1 (MQ=255)
                tGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGa                                                                     <  2:7510969/93‑1 (MQ=255)
                 gTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGaa                                                                    <  1:1011726/93‑1 (MQ=255)
                    gCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGt                                                                 <  2:6115882/93‑1 (MQ=255)
                     cTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTg                                                                >  1:515028/1‑93 (MQ=255)
                     cTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTg                                                                >  2:641073/1‑93 (MQ=255)
                      tGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTgg                                                               >  2:2869557/1‑93 (MQ=255)
                      tGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTgg                                                               <  2:3424528/93‑1 (MQ=255)
                       gACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGa                                                              <  1:6885706/93‑1 (MQ=255)
                        aCCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGaa                                                             <  2:1939545/93‑1 (MQ=255)
                        aCCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGaa                                                             <  2:6229873/93‑1 (MQ=255)
                        aCCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGaa                                                             <  1:2445815/93‑1 (MQ=255)
                        aCCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGaa                                                             <  1:6486161/93‑1 (MQ=255)
                        aCCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGaa                                                             <  2:4520398/93‑1 (MQ=255)
                        aCCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGaa                                                             <  2:4349166/93‑1 (MQ=255)
                         ccGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAAt                                                            <  2:4608699/93‑1 (MQ=255)
                         ccGTCCGGGGCATGATCTGCGTTATGCCATAGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAAt                                                            <  1:3493912/93‑1 (MQ=255)
                           gTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGc                                                          <  1:4283290/93‑1 (MQ=255)
                            tCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCg                                                         >  1:1214488/1‑93 (MQ=255)
                             ccGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGt                                                        <  1:4416729/93‑1 (MQ=255)
                              cGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTa                                                       <  2:472956/93‑1 (MQ=255)
                                 ggCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTaaaa                                                    <  2:4318381/93‑1 (MQ=255)
                                 ggCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTaaaa                                                    <  2:3343179/93‑1 (MQ=255)
                                 ggCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTaaaa                                                    <  1:2789516/93‑1 (MQ=255)
                                  gCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAAc                                                   >  2:3644061/1‑93 (MQ=255)
                                    aTGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACgg                                                 >  1:4167028/1‑93 (MQ=255)
                                    aTGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACgg                                                 <  1:1751658/93‑1 (MQ=255)
                                     tGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGt                                                <  2:1637679/93‑1 (MQ=255)
                                       aTCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTc                                              >  1:7183812/1‑93 (MQ=255)
                                       aTCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTc                                              <  2:4856096/93‑1 (MQ=255)
                                        tCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCa                                             >  1:4859298/1‑93 (MQ=255)
                                        tCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCa                                             >  2:3143508/1‑93 (MQ=255)
                                         cTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAg                                            <  2:4454325/93‑1 (MQ=255)
                                         cTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAg                                            <  1:5524859/93‑1 (MQ=255)
                                          tGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGt                                           <  1:5420867/93‑1 (MQ=255)
                                           gCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTg                                          >  2:6322104/1‑93 (MQ=255)
                                           gCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTg                                          <  2:3528812/93‑1 (MQ=255)
                                             gTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGt                                        >  2:5645774/1‑93 (MQ=255)
                                              ttATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTa                                       >  2:1818783/1‑93 (MQ=255)
                                                aTGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATc                                     <  2:3240270/93‑1 (MQ=255)
                                                aTGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATc                                     <  2:6868193/93‑1 (MQ=255)
                                                aTGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATc                                     <  2:7237746/93‑1 (MQ=255)
                                                   ccATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTgg                                  >  1:2256383/1‑93 (MQ=255)
                                                    cATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGc                                 >  1:1389636/1‑93 (MQ=255)
                                                          tGCTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGa                           >  1:912775/1‑93 (MQ=255)
                                                            cTTCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTACAGTGGTATCTGGCTAATGaaa                         >  1:209322/1‑93 (MQ=255)
                                                             ttCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAg                        <  1:1304055/93‑1 (MQ=255)
                                                             ttCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAg                        <  2:2061259/93‑1 (MQ=255)
                                                             ttCGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAg                        >  1:6308499/1‑93 (MQ=255)
                                                               cGAAAATTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCt                      >  2:319947/1‑93 (MQ=255)
                                                                  aaaTTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCtggt                   >  1:309830/1‑93 (MQ=255)
                                                                    aTTGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCtggtgg                 <  2:3758476/93‑1 (MQ=255)
                                                                     ttGCCCGTGAACTTGGCTGGGCTGCCGAAGGAAACCTTTGAAAGGGGAATGCGTAAAACGGTTCAGGGGGATCTGGTTAATGAAAGCtggagg                 >  1:3650399/1‑93 (MQ=255)
                                                                      tGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGaa               <  1:4079507/93‑1 (MQ=255)
                                                                      tGCCCGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGaa               <  2:4119329/93‑1 (MQ=255)
                                                                       gCCCGTGAACTTGGCTGGC‑TGCCGCCGGAAACCTTTGAAAGTGGAATGCGTTAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAg              <  1:3331108/93‑1 (MQ=255)
                                                                        cccGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGc             >  2:5208711/1‑93 (MQ=255)
                                                                         ccGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCa            >  2:4911182/1‑93 (MQ=255)
                                                                         ccGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCa            <  2:3995456/93‑1 (MQ=255)
                                                                          cGTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGGAAGAGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAg           >  1:3218008/1‑93 (MQ=255)
                                                                           gTGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAgg          >  2:5987479/1‑93 (MQ=255)
                                                                            tGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGt         <  1:777891/93‑1 (MQ=255)
                                                                            tGAACTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGt         <  2:1012980/93‑1 (MQ=255)
                                                                              aaCTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGc       <  1:302238/93‑1 (MQ=255)
                                                                               aCTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCa      <  1:1502874/93‑1 (MQ=255)
                                                                               aCTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCa      >  2:2359448/1‑93 (MQ=255)
                                                                               aCTTGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCa      >  1:5091446/1‑93 (MQ=255)
                                                                                 ttGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAgg    >  1:6070700/1‑93 (MQ=255)
                                                                                 ttGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAgg    >  2:6604148/1‑93 (MQ=255)
                                                                                 ttGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAgg    >  1:2678978/1‑93 (MQ=255)
                                                                                 ttGGCTGGC‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAgg    >  2:738873/1‑93 (MQ=255)
                                                                                   ggctggc‑tGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGAc  <  1:5886612/93‑1 (MQ=255)
                                                                                        ||                                                                                       
GTGACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGCG‑TGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGAC  >  NC_000913/3970987‑3971162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 280 total aligned reads displayed.
CTATCGTGACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGCGTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGACGG  >  NC_000913/3970982‑3971164
                                                                                             |                                                                                         
CTATCGTGACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGG                                                                                           >  SRR4302542.2504134/1‑94 (MQ=60)
     GTGACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCC                                                                                      <  SRR4302542.3358582/94‑1 (MQ=60)
      TGACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCTGTGAACTTGGCTGGCTGCCG                                                                                     >  SRR4302542.3420079/1‑94 (MQ=60)
      TGACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCG                                                                                     <  SRR4302542.2508535/94‑1 (MQ=60)
      TGACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCG                                                                                     <  SRR4302542.1868906/94‑1 (MQ=60)
      TGACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGACATTGATGATTCGAAAATTGACCGCGAACTTGGCTGGCTGCCG                                                                                     >  SRR4302542.7535607/1‑94 (MQ=60)
        ACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTCCCCGTGAACTTGGCTGGCTGCCGCA                                                                                   <  SRR4302542.7368355/94‑1 (MQ=60)
         CCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAG                                                                                  <  SRR4302542.1964270/94‑1 (MQ=60)
         CCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAG                                                                                  >  SRR4302542.3686209/1‑94 (MQ=60)
         CCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAG                                                                                  >  SRR4302542.3263838/1‑94 (MQ=60)
         CCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAG                                                                                  <  SRR4302542.7013402/94‑1 (MQ=60)
          CTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGG                                                                                 >  SRR4302542.3465704/1‑94 (MQ=60)
          CTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGG                                                                                 >  SRR4302542.2527717/1‑94 (MQ=60)
          CTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGG                                                                                 >  SRR4302542.4990429/1‑94 (MQ=60)
          CTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGG                                                                                 <  SRR4302542.1932463/94‑1 (MQ=60)
          CTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGG                                                                                 <  SRR4302542.6827101/94‑1 (MQ=60)
          CTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGG                                                                                 >  SRR4302542.7252913/1‑94 (MQ=60)
          CTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGG                                                                                 >  SRR4302542.741687/1‑94 (MQ=60)
           TGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGA                                                                                >  SRR4302542.2882138/1‑94 (MQ=60)
            GATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAA                                                                               >  SRR4302542.2579219/1‑94 (MQ=60)
            GATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAA                                                                               >  SRR4302542.5181072/1‑94 (MQ=60)
            GATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAA                                                                               >  SRR4302542.5724261/1‑94 (MQ=60)
            GATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAA                                                                               >  SRR4302542.1820251/1‑94 (MQ=60)
             ATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAA                                                                              >  SRR4302542.1427421/1‑94 (MQ=60)
             ATCACCTTTGTCGCTGACCGTCCGGGGCATCATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAA                                                                              <  SRR4302542.832549/94‑1 (MQ=60)
              TCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAAC                                                                             >  SRR4302542.7268221/1‑94 (MQ=60)
              TCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAAC                                                                             >  SRR4302542.6740518/1‑94 (MQ=60)
              TCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAAC                                                                             <  SRR4302542.2604419/94‑1 (MQ=60)
              TCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAAC                                                                             >  SRR4302542.14102/1‑94 (MQ=60)
              TCACCTTTGTCGCTGACCGACCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAAC                                                                             >  SRR4302542.1086959/1‑94 (MQ=60)
               CACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACC                                                                            <  SRR4302542.2948996/94‑1 (MQ=60)
               CACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACC                                                                            >  SRR4302542.2731036/1‑94 (MQ=60)
               CACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACC                                                                            <  SRR4302542.5648192/94‑1 (MQ=60)
               CACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACC                                                                            >  SRR4302542.4365109/1‑94 (MQ=60)
               CACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACC                                                                            <  SRR4302542.1619031/94‑1 (MQ=60)
                ACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCT                                                                           >  SRR4302542.2179454/1‑94 (MQ=60)
                ACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCT                                                                           <  SRR4302542.4810632/94‑1 (MQ=60)
                ACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCT                                                                           >  SRR4302542.1659988/1‑94 (MQ=60)
                ACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCT                                                                           <  SRR4302542.6686678/94‑1 (MQ=60)
                 CCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTT                                                                          <  SRR4302542.5387409/94‑1 (MQ=60)
                 CCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTT                                                                          >  SRR4302542.73570/1‑94 (MQ=60)
                  CTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTT                                                                         >  SRR4302542.6401730/1‑94 (MQ=60)
                  CTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTT                                                                         >  SRR4302542.6115760/1‑94 (MQ=60)
                  CTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTT                                                                         <  SRR4302542.1894824/94‑1 (MQ=60)
                  CTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTT                                                                         <  SRR4302542.5290577/94‑1 (MQ=60)
                   TTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTG                                                                        >  SRR4302542.50364/1‑94 (MQ=60)
                   TTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTG                                                                        <  SRR4302542.386942/94‑1 (MQ=60)
                   TTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTG                                                                        >  SRR4302542.4361341/1‑94 (MQ=60)
                   TTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTG                                                                        >  SRR4302542.1259158/1‑94 (MQ=60)
                    TTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGA                                                                       >  SRR4302542.1722089/1‑94 (MQ=60)
                    TTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGA                                                                       >  SRR4302542.4814438/1‑94 (MQ=60)
                     TGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAA                                                                      >  SRR4302542.3600770/1‑94 (MQ=60)
                      GTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAA                                                                     <  SRR4302542.7598483/94‑1 (MQ=60)
                      GTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAA                                                                     <  SRR4302542.1020438/94‑1 (MQ=60)
                       TCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAG                                                                    <  SRR4302542.2816134/94‑1 (MQ=60)
                        CGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGT                                                                   >  SRR4302542.5398016/1‑94 (MQ=60)
                        CGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGT                                                                   <  SRR4302542.1309462/94‑1 (MQ=60)
                        CGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGT                                                                   >  SRR4302542.1321290/1‑94 (MQ=60)
                        CGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGT                                                                   <  SRR4302542.7321010/94‑1 (MQ=60)
                        CGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGT                                                                   <  SRR4302542.21437/94‑1 (MQ=60)
                         GCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTG                                                                  <  SRR4302542.5292920/94‑1 (MQ=60)
                         GCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTG                                                                  >  SRR4302542.3097073/1‑94 (MQ=60)
                          CTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGG                                                                 >  SRR4302542.629692/1‑94 (MQ=60)
                           TGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGA                                                                <  SRR4302542.2665825/94‑1 (MQ=60)
                           TGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGA                                                                <  SRR4302542.5137852/94‑1 (MQ=60)
                           TGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGA                                                                >  SRR4302542.5198306/1‑94 (MQ=60)
                            GACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAA                                                               <  SRR4302542.6953339/94‑1 (MQ=60)
                             ACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAAT                                                              <  SRR4302542.6975710/94‑1 (MQ=60)
                             ACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAAT                                                              >  SRR4302542.7105513/1‑94 (MQ=60)
                             ACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAAT                                                              <  SRR4302542.6550074/94‑1 (MQ=60)
                             ACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAAT                                                              <  SRR4302542.3834948/94‑1 (MQ=60)
                             ACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAAT                                                              <  SRR4302542.2469612/94‑1 (MQ=60)
                              CCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGTAGGAAACCTTTGAAAGTGGAATG                                                             >  SRR4302542.6987362/1‑94 (MQ=60)
                              CCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATG                                                             <  SRR4302542.590239/94‑1 (MQ=60)
                              CCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATG                                                             <  SRR4302542.1153443/94‑1 (MQ=60)
                              CCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATG                                                             <  SRR4302542.3611877/94‑1 (MQ=60)
                              CCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATG                                                             >  SRR4302542.1021706/1‑94 (MQ=60)
                              CCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATG                                                             <  SRR4302542.3518772/94‑1 (MQ=60)
                              CCGTCCGGGGCATGATCTGCGTTATGCCATAGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATG                                                             <  SRR4302542.3526588/94‑1 (MQ=60)
                                GTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCG                                                           <  SRR4302542.4325419/94‑1 (MQ=60)
                                GTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCG                                                           <  SRR4302542.4459314/94‑1 (MQ=60)
                                GTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCG                                                           <  SRR4302542.4601201/94‑1 (MQ=60)
                                GTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCG                                                           >  SRR4302542.2990229/1‑94 (MQ=60)
                                  CCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTA                                                         <  SRR4302542.6596277/94‑1 (MQ=60)
                                  CCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTA                                                         <  SRR4302542.4460105/94‑1 (MQ=60)
                                    GGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAA                                                       <  SRR4302542.7500056/94‑1 (MQ=60)
                                    GGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAA                                                       >  SRR4302542.1641875/1‑94 (MQ=60)
                                      GGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAAC                                                     >  SRR4302542.5529595/1‑94 (MQ=60)
                                      GGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAAC                                                     <  SRR4302542.2816372/94‑1 (MQ=60)
                                        CATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGG                                                   >  SRR4302542.1616876/1‑94 (MQ=60)
                                        CATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGG                                                   >  SRR4302542.4208127/1‑94 (MQ=60)
                                         ATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGT                                                  >  SRR4302542.981745/1‑94 (MQ=60)
                                         ATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGT                                                  >  SRR4302542.6733975/1‑94 (MQ=60)
                                         ATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGT                                                  <  SRR4302542.1766866/94‑1 (MQ=60)
                                         ATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGT                                                  >  SRR4302542.3246569/1‑94 (MQ=60)
                                          TGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTT                                                 <  SRR4302542.5585177/94‑1 (MQ=60)
                                          TGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTT                                                 <  SRR4302542.232557/94‑1 (MQ=60)
                                           GATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTC                                                >  SRR4302542.7254257/1‑94 (MQ=60)
                                           GATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTC                                                >  SRR4302542.5916730/1‑94 (MQ=60)
                                            ATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTTAAAGTGGAATGCGAAAAAAGGCTCA                                               >  SRR4302542.6647754/1‑94 (MQ=60)
                                            ATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCA                                               <  SRR4302542.5700690/94‑1 (MQ=60)
                                            ATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCA                                               <  SRR4302542.4978367/94‑1 (MQ=60)
                                            ATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCA                                               >  SRR4302542.6885432/1‑94 (MQ=60)
                                            ATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCA                                               <  SRR4302542.2282398/94‑1 (MQ=60)
                                             TCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAATTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAG                                              <  SRR4302542.3069004/94‑1 (MQ=60)
                                             TCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAG                                              >  SRR4302542.1045795/1‑94 (MQ=60)
                                             TCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAG                                              <  SRR4302542.6939162/94‑1 (MQ=60)
                                             TCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAG                                              <  SRR4302542.5537875/94‑1 (MQ=60)
                                              CTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGT                                             <  SRR4302542.1049778/94‑1 (MQ=60)
                                              CTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGT                                             >  SRR4302542.2890758/1‑94 (MQ=60)
                                              CTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGT                                             >  SRR4302542.2809082/1‑94 (MQ=60)
                                              CTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGT                                             <  SRR4302542.1201428/94‑1 (MQ=60)
                                              CTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGT                                             >  SRR4302542.6886561/1‑94 (MQ=60)
                                              CTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGT                                             <  SRR4302542.5865412/94‑1 (MQ=60)
                                              CTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGT                                             <  SRR4302542.897179/94‑1 (MQ=60)
                                               TGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTG                                            <  SRR4302542.5473500/94‑1 (MQ=60)
                                               TGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTG                                            <  SRR4302542.6990471/94‑1 (MQ=60)
                                                GCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGG                                           >  SRR4302542.4005446/1‑94 (MQ=60)
                                                GCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGG                                           <  SRR4302542.4879324/94‑1 (MQ=60)
                                                 CGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGT                                          >  SRR4302542.6561654/1‑94 (MQ=60)
                                                  GTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTA                                         >  SRR4302542.5047046/1‑94 (MQ=60)
                                                  GTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTA                                         >  SRR4302542.2334049/1‑94 (MQ=60)
                                                  GTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTA                                         >  SRR4302542.266509/1‑94 (MQ=60)
                                                  GTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGAGTAAAACGGTTCAGTGGTA                                         >  SRR4302542.7204635/1‑94 (MQ=60)
                                                   TTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTAT                                        >  SRR4302542.6004254/1‑94 (MQ=60)
                                                    TATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATC                                       >  SRR4302542.2272663/1‑94 (MQ=60)
                                                     ATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCT                                      >  SRR4302542.6502958/1‑94 (MQ=60)
                                                     ATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCT                                      <  SRR4302542.4158880/94‑1 (MQ=60)
                                                      TGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTG                                     >  SRR4302542.497808/1‑94 (MQ=60)
                                                      TGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTG                                     <  SRR4302542.1171857/94‑1 (MQ=60)
                                                      TGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTG                                     >  SRR4302542.3685597/1‑94 (MQ=60)
                                                      TGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTG                                     >  SRR4302542.2510071/1‑94 (MQ=60)
                                                       GCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGG                                    <  SRR4302542.5694525/94‑1 (MQ=60)
                                                       GCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGG                                    >  SRR4302542.4244126/1‑94 (MQ=60)
                                                       GCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGG                                    >  SRR4302542.1849542/1‑94 (MQ=60)
                                                       GCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGG                                    >  SRR4302542.4588595/1‑94 (MQ=60)
                                                        CCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGC                                   >  SRR4302542.1401634/1‑94 (MQ=60)
                                                        CCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGC                                   >  SRR4302542.3536335/1‑94 (MQ=60)
                                                        CCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGC                                   >  SRR4302542.5501146/1‑94 (MQ=60)
                                                         CATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCT                                  >  SRR4302542.5655516/1‑94 (MQ=60)
                                                           TTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAA                                <  SRR4302542.6144085/94‑1 (MQ=60)
                                                           TTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAA                                >  SRR4302542.4249504/1‑94 (MQ=60)
                                                            TGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAAT                               <  SRR4302542.1490758/94‑1 (MQ=60)
                                                            TGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAAT                               <  SRR4302542.1489608/94‑1 (MQ=60)
                                                              ATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGA                             >  SRR4302542.920645/1‑94 (MQ=60)
                                                               TGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAA                            >  SRR4302542.3589019/1‑94 (MQ=60)
                                                                GCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAA                           <  SRR4302542.1346981/94‑1 (MQ=60)
                                                                GCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTACAGTGGTATCTGGCTAATGAAA                           >  SRR4302542.211127/1‑94 (MQ=60)
                                                                 CTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAG                          <  SRR4302542.4714715/94‑1 (MQ=60)
                                                                 CTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAG                          >  SRR4302542.6751452/1‑94 (MQ=60)
                                                                 CTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAG                          >  SRR4302542.1744402/1‑94 (MQ=60)
                                                                 CTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAG                          >  SRR4302542.5246502/1‑94 (MQ=60)
                                                                  TTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGC                         <  SRR4302542.1315282/94‑1 (MQ=60)
                                                                    CGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTG                       >  SRR4302542.3168888/1‑94 (MQ=60)
                                                                    CGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTG                       <  SRR4302542.2748327/94‑1 (MQ=60)
                                                                     GAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGAAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGG                      <  SRR4302542.3037706/94‑1 (MQ=60)
                                                                      AAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGT                     <  SRR4302542.3146501/94‑1 (MQ=60)
                                                                      AAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGT                     <  SRR4302542.4528262/94‑1 (MQ=60)
                                                                      AAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGT                     >  SRR4302542.419256/1‑94 (MQ=60)
                                                                      AAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGT                     <  SRR4302542.6645088/94‑1 (MQ=60)
                                                                       AAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTG                    <  SRR4302542.644803/94‑1 (MQ=60)
                                                                       AAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTG                    <  SRR4302542.3968892/94‑1 (MQ=60)
                                                                        AATTGCCCGTGAACTTGGTTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGG                   <  SRR4302542.6797661/94‑1 (MQ=60)
                                                                        AATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGG                   >  SRR4302542.806125/1‑94 (MQ=60)
                                                                        AATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGG                   >  SRR4302542.4195330/1‑94 (MQ=60)
                                                                          TTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAA                 <  SRR4302542.5581997/94‑1 (MQ=60)
                                                                           TGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAG                <  SRR4302542.4119713/94‑1 (MQ=60)
                                                                           TGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAG                <  SRR4302542.675675/94‑1 (MQ=60)
                                                                            GCCCGTGAACTTGGCTGGCTGCCGCCGGAAACCTTTGAAAGTGGAATGCGTTAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGC               <  SRR4302542.3362458/94‑1 (MQ=60)
                                                                            GCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGC               >  SRR4302542.985882/1‑94 (MQ=60)
                                                                             CCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCA              >  SRR4302542.4095646/1‑94 (MQ=60)
                                                                              CCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGGAAGAGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAG             >  SRR4302542.3248468/1‑94 (MQ=60)
                                                                              CCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAG             <  SRR4302542.219492/94‑1 (MQ=60)
                                                                              CCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAG             <  SRR4302542.5189612/94‑1 (MQ=60)
                                                                              CCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAG             <  SRR4302542.1241634/94‑1 (MQ=60)
                                                                              CCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAG             >  SRR4302542.2038851/1‑94 (MQ=60)
                                                                               CGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGG            <  SRR4302542.6697686/94‑1 (MQ=60)
                                                                               CGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGG            <  SRR4302542.1744301/94‑1 (MQ=60)
                                                                               CGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGG            <  SRR4302542.6240558/94‑1 (MQ=60)
                                                                               CGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGG            >  SRR4302542.2704479/1‑94 (MQ=60)
                                                                                GTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGT           >  SRR4302542.7557825/1‑94 (MQ=60)
                                                                                 TGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTG          <  SRR4302542.7559126/94‑1 (MQ=60)
                                                                                   AACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCA        <  SRR4302542.304870/94‑1 (MQ=60)
                                                                                    ACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAG       <  SRR4302542.532434/94‑1 (MQ=60)
                                                                                    ACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAG       <  SRR4302542.5362346/94‑1 (MQ=60)
                                                                                    ACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAG       <  SRR4302542.2969119/94‑1 (MQ=60)
                                                                                    ACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGGGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAG       >  SRR4302542.5164488/1‑94 (MQ=60)
                                                                                     CTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGG      >  SRR4302542.5583230/1‑94 (MQ=60)
                                                                                     CTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGG      >  SRR4302542.917524/1‑94 (MQ=60)
                                                                                     CTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGG      >  SRR4302542.6129496/1‑94 (MQ=60)
                                                                                     CTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGG      <  SRR4302542.3076181/94‑1 (MQ=60)
                                                                                      TTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGGGCAGGA     >  SRR4302542.3288875/1‑94 (MQ=60)
                                                                                       TGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGAC    >  SRR4302542.5864019/1‑94 (MQ=60)
                                                                                       TGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGAC    <  SRR4302542.3281019/94‑1 (MQ=60)
                                                                                       TGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGAC    >  SRR4302542.4787092/1‑94 (MQ=60)
                                                                                        GGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGACG   <  SRR4302542.5106606/94‑1 (MQ=60)
                                                                                        GGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGACG   <  SRR4302542.5927304/94‑1 (MQ=60)
                                                                                        GGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGACG   <  SRR4302542.5943665/94‑1 (MQ=60)
                                                                                        GGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGACG   <  SRR4302542.3793445/94‑1 (MQ=60)
                                                                                         GCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGACGG  <  SRR4302542.1366318/94‑1 (MQ=60)
                                                                                             |                                                                                         
CTATCGTGACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGCGTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGACGG  >  NC_000913/3970982‑3971164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑