Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,980,297	(C)_8→9	noncoding (79/87 nt)	leuT →	tRNA‑Leu

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,980,289	1	.	C	76.6%	633.8 / 196.6	257	noncoding (71/87 nt)	leuT	tRNA‑Leu
Reads supporting (aligned to +/- strand): ref base . (22/38); new base C (87/109); total (110/147)
Fisher's exact test for biased strand distribution p-value = 3.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 325 total aligned reads displayed.

CATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGT  >  NC_000913/3980197‑3980380

cATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑t                                                                                                >  1:1836051/1‑93 (MQ=255)

cATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGCTCAAG‑‑t                                                                                                >  2:4350850/1‑93 (MQ=255)

 attattAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑c                                                                                            >  1:3370559/1‑93 (MQ=255)

  ttattaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑cc                                                                                           >  1:1692088/1‑93 (MQ=255)

  ttattaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑cc                                                                                           >  2:7374123/1‑93 (MQ=255)

  ttattaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑cc                                                                                           >  1:4107854/1‑93 (MQ=255)

   tattaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccc                                                                                          <  1:2421794/93‑1 (MQ=255)

    attaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑cccc                                                                                         >  2:953981/1‑93 (MQ=255)

    attaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑cccc                                                                                         >  1:7193073/1‑93 (MQ=255)

    attaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑cccc                                                                                         <  1:6682191/93‑1 (MQ=255)

    attaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑cccc                                                                                         <  1:891915/93‑1 (MQ=255)

    attaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑cccc                                                                                         <  2:6584650/93‑1 (MQ=255)

    attaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑cccc                                                                                         <  2:7420165/93‑1 (MQ=255)

     ttaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc                                                                                        <  2:6956144/93‑1 (MQ=255)

     ttaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccc                                                                                        >  1:5961716/1‑93 (MQ=255)

     ttaGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAG‑‑T‑‑‑ccccc                                                                                        >  1:3757186/1‑93 (MQ=255)

       aGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccccc                                                                                      >  2:3983642/1‑93 (MQ=255)

        gAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑cccccccc                                                                                     <  1:4789007/93‑1 (MQ=255)

          aGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccccccct                                                                                   >  2:785473/1‑91 (MQ=255)

          aGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccccccct                                                                                   <  2:6678037/93‑3 (MQ=255)

          aGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑cccccccccc                                                                                   <  2:1863938/93‑3 (MQ=255)

           gTTGTGGCAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑cccccccccct                                                                                  <  1:4596069/93‑4 (MQ=255)

           gTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑ccccccccccc                                                                                  >  1:4303829/1‑90 (MQ=255)

            ttGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTTAAG‑‑T‑‑‑cccccccccccc                                                                                 >  1:1309969/1‑89 (MQ=255)

            ttGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑cccccccccctc                                                                                 <  1:2829554/93‑5 (MQ=255)

               tgACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGcacc                                                                              >  1:6445580/1‑93 (MQ=35)

                gACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGcacc                                                                              >  1:275398/1‑93 (MQ=255)

                  cAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCC‑CCCCCCCCTCGcacca                                                                             >  1:4418601/1‑93 (MQ=11)

                     tGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGAc                                                                         >  1:2197375/1‑93 (MQ=255)

                     tGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGAc                                                                         <  1:7442142/93‑1 (MQ=255)

                      gCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACt                                                                        <  2:6174157/93‑1 (MQ=255)

                      gCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACt                                                                        <  2:6848277/93‑1 (MQ=255)

                      gCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACt                                                                        <  2:7077211/93‑1 (MQ=255)

                        gAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTa                                                                     <  2:719655/93‑1 (MQ=39)

                         aaGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTa                                                                     >  2:6985161/1‑93 (MQ=255)

                          aGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTaa                                                                    >  2:4072023/1‑93 (MQ=255)

                          aGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTaa                                                                    <  2:2403936/93‑1 (MQ=255)

                          aGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTaaa                                                                   <  1:3325714/93‑1 (MQ=255)

                          aGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACCTTaaa                                                                   >  2:5339336/1‑93 (MQ=255)

                           ggTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTaaa                                                                   <  1:7215585/93‑1 (MQ=255)

                           ggTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAg                                                                  <  2:1578265/93‑1 (MQ=255)

                            gTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAg                                                                  <  2:1249403/93‑1 (MQ=255)

                            gTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAg                                                                  <  2:1668564/93‑1 (MQ=255)

                             tGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGa                                                                 <  2:6777725/93‑1 (MQ=255)

                              ggCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGaa                                                                <  2:1355331/93‑1 (MQ=255)

                              ggCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAAt                                                               <  1:1520974/93‑1 (MQ=255)

                              ggCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAAt                                                               <  1:1918578/93‑1 (MQ=255)

                                 ggAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTg                                                             >  1:6086605/1‑93 (MQ=255)

                                   aaTTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGaa                                                           <  2:7014383/93‑1 (MQ=255)

                                     ttGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACt                                                         >  1:5394210/1‑93 (MQ=255)

                                      tGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTa                                                        <  2:3420358/93‑1 (MQ=255)

                                      tGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAAAATTGAACTa                                                        >  1:5100208/1‑93 (MQ=255)

                                        gTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTaaa                                                      <  1:4932157/93‑1 (MQ=255)

                                         tAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTaaaa                                                     >  2:2805470/1‑93 (MQ=255)

                                         tAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTaaaa                                                     >  2:4606060/1‑93 (MQ=255)

                                          aGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTaaaaa                                                    <  1:1102885/93‑1 (MQ=255)

                                          aGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTaaaaa                                                    <  1:3556344/93‑1 (MQ=255)

                                          aGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAG‑‑TC‑‑CCCCCCCCCCCCACCACCACTTTTAAAAAATGAAATaaaaa                                                    >  1:6340492/1‑93 (MQ=14)

                                           gACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTTAAAAATTGAAACaaaaaa                                                   >  1:1755516/1‑92 (MQ=14)

                                           gACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAAt                                                   >  2:5826580/1‑93 (MQ=255)

                                           gACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAAt                                                   <  2:5945641/93‑1 (MQ=255)

                                           gACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAAt                                                   >  2:3106129/1‑93 (MQ=255)

                                           gACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAAtt                                                  >  1:2273795/1‑93 (MQ=255)

                                            aCGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTc                                                 <  2:6392256/93‑1 (MQ=255)

                                              gcgcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCa                                                >  1:5583138/1‑93 (MQ=255)

                                               cgcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCaaa                                              <  2:1146355/93‑1 (MQ=255)

                                                gcTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAG‑‑TC‑‑CCCCCCCCTCGGACCACCACTTTAAAGAATTGAACTAAAAATTCaaa                                              >  1:4913364/1‑93 (MQ=21)

                                                  tAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCaaaaa                                            <  1:6514355/93‑1 (MQ=255)

                                                  tAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAg                                           <  2:2358504/93‑1 (MQ=255)

                                                    gCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGc                                          >  1:3514956/1‑93 (MQ=255)

                                                    gCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGc                                          <  2:4877051/93‑1 (MQ=255)

                                                     cTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCa                                         <  1:2966216/93‑1 (MQ=255)

                                                        cAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTa                                      <  2:898044/93‑1 (MQ=255)

                                                         aGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAt                                     <  1:7354494/93‑1 (MQ=255)

                                                         aGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAt                                     >  2:5763890/1‑93 (MQ=255)

                                                         aGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAtt                                    >  2:5514918/1‑93 (MQ=255)

                                                          ggTGTTAGTGTCCTTACGGACGGGGGGGTTCAAGGCC‑‑‑CCCCCCCCTCGCTCTATGGCTTTAAAGAATGGAACTAAAAATTCAAAAAGCAGTAt                                     >  2:7294071/1‑93 (MQ=18)

                                                           gtgtTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAttt                                   <  2:6344945/93‑1 (MQ=255)

                                                             gtTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCg                                 <  1:786089/93‑1 (MQ=255)

                                                              ttAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCgg                                <  2:6510106/93‑1 (MQ=255)

                                                                aGTGTCCTTACGGACGTGGGGGTTCAAG‑‑TCCCCCCCCCCCCCCCACCCCCCCTTTAAAAAATTTAAATAAAAATTCAAAAAACAATATTTCgg                                >  2:3212568/1‑93 (MQ=9)

                                                                aGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGa                             <  2:5130452/93‑1 (MQ=255)

                                                                 gtgtCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAg                            >  1:1033030/1‑93 (MQ=255)

                                                                  tgtCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAg                            <  1:6206080/93‑1 (MQ=255)

                                                                    tCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTa                          <  2:4921318/93‑1 (MQ=255)

                                                                    tCCTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTa                          <  2:3344077/93‑1 (MQ=255)

                                                                     ccTTACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAg                         <  1:2569437/93‑1 (MQ=255)

                                                                       ttACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAgcg                       >  2:2663039/1‑93 (MQ=255)

                                                                        tACGGACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAgcgc                      <  2:4826273/93‑1 (MQ=255)

                                                                           ggACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGc                   <  2:4208290/93‑1 (MQ=255)

                                                                           ggACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGc                   >  2:5711438/1‑93 (MQ=255)

                                                                            gACGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCt                  <  2:2477029/93‑1 (MQ=255)

                                                                             aCGTGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCtt                 <  1:5683965/93‑1 (MQ=255)

                                                                                tGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGt              >  2:3744630/1‑93 (MQ=255)

                                                                                tGGGGGTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGt              <  1:986367/93‑1 (MQ=255)

                                                                                 gggggTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTa             >  1:6892962/1‑93 (MQ=255)

                                                                                 gggggTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAg            >  2:2894553/1‑93 (MQ=255)

                                                                                     gTTCAAG‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAgcgc         <  2:5013024/93‑1 (MQ=255)

                                                                                      ttCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCaa       >  2:209874/1‑93 (MQ=255)

                                                                                          aG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTgg   >  1:3090398/1‑93 (MQ=255)

CATTATTAGAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGT  >  NC_000913/3980197‑3980380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 274 total aligned reads displayed.

GAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAG  >  NC_000913/3980205‑3980390

 AAGTTGTGACAATGCGCAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCCC                                                                                             >  SRR4302542.7535958/1‑94 (MQ=27)

   GTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTTAAG‑‑‑T‑‑‑CCCCCCCCcccc                                                                                           >  SRR4302542.1321257/1‑90 (MQ=23)

   GTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCG                                                                                            >  SRR4302542.5009439/1‑94 (MQ=23)

    TTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCcctcg                                                                                          <  SRR4302542.2856750/94‑6 (MQ=22)

     TGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGC‑‑C‑‑‑CCCCCCCCTCGCA                                                                                          <  SRR4302542.3745389/94‑1 (MQ=14)

     TGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCA                                                                                          >  SRR4302542.1810339/1‑94 (MQ=14)

     TGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCAC                                                                                         >  SRR4302542.355250/1‑94 (MQ=15)

     TGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAG‑‑‑T‑‑‑CCCCCCCCcccccc                                                                                         >  SRR4302542.1707889/1‑88 (MQ=15)

      GTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCA                                                                                          >  SRR4302542.1222212/1‑94 (MQ=10)

      GTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACC                                                                                        >  SRR4302542.6509057/1‑94 (MQ=11)

      GTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAG‑‑‑TC‑‑CCCCCCCCTCGCAC                                                                                         >  SRR4302542.7251425/1‑94 (MQ=9)

       TGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACC                                                                                        >  SRR4302542.277752/1‑94 (MQ=7)

         ACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCA                                                                                       >  SRR4302542.4462000/1‑94 (MQ=2)

         ACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCAC                                                                                      <  SRR4302542.4218801/94‑1 (MQ=5)

         ACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCAC                                                                                      <  SRR4302542.6070488/94‑1 (MQ=5)

           tgtggGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTTTCCTTACGGACGTGGGGGTTCAAG‑‑‑C‑‑‑CCCCCCCCccctcgcaccaa                                                                                   <  SRR4302542.1286289/89‑13 (MQ=0)

           AATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACG                                                                                     <  SRR4302542.5667828/94‑1 (MQ=2)

           AATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCAACACG                                                                                     <  SRR4302542.7041568/94‑1 (MQ=0)

            ATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGAC                                                                                   >  SRR4302542.2216295/1‑94 (MQ=5)

            ATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACT                                                                                  <  SRR4302542.2228077/94‑1 (MQ=8)

             TGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACT                                                                                  <  SRR4302542.7515009/94‑1 (MQ=7)

              GCGAGGGGGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGCC‑C‑‑‑CCCCCCCCTCGCACCACGACT                                                                                  <  SRR4302542.4305731/94‑1 (MQ=6)

              GCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTT                                                                                 >  SRR4302542.2367409/1‑94 (MQ=10)

              GCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTT                                                                                 <  SRR4302542.2896465/94‑1 (MQ=10)

               CGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTT                                                                                 <  SRR4302542.5638718/94‑1 (MQ=9)

               CGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTA                                                                               <  SRR4302542.4706864/94‑1 (MQ=21)

                GAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTT                                                                                <  SRR4302542.5699671/94‑1 (MQ=12)

                 AAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTA                                                                               >  SRR4302542.6055823/1‑94 (MQ=19)

                 AAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAA                                                                              >  SRR4302542.2128861/1‑94 (MQ=22)

                  AGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAG                                                                            <  SRR4302542.3357029/94‑1 (MQ=29)

                  AGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAG                                                                            <  SRR4302542.7400656/94‑1 (MQ=29)

                   GGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAA                                                                             <  SRR4302542.2253537/94‑1 (MQ=24)

                   GGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAG                                                                            <  SRR4302542.7286378/94‑1 (MQ=27)

                    GTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGA                                                                           <  SRR4302542.3982588/94‑1 (MQ=29)

                     TGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGCC‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGA                                                                           <  SRR4302542.1422527/94‑1 (MQ=28)

                     TGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAAT                                                                         <  SRR4302542.3304342/94‑1 (MQ=37)

                     TGGCGGAATTGGTAGACCCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTGAAG‑‑‑TG‑‑CCCACCCCTCGGCCCACGACTCTAAAGAA                                                                          >  SRR4302542.3378984/1‑94 (MQ=0)

                      GGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAA                                                                          <  SRR4302542.6460248/94‑1 (MQ=31)

                      GGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATT                                                                        <  SRR4302542.1935156/94‑1 (MQ=39)

                      GGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATT                                                                        <  SRR4302542.1534111/94‑1 (MQ=39)

                       GCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCCCCCCCCCCCTCGCACCACGACTTTAAAGAA                                                                          <  SRR4302542.3185030/94‑1 (MQ=28)

                       GCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATT                                                                        <  SRR4302542.630215/94‑1 (MQ=37)

                        CGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATT                                                                        >  SRR4302542.4343525/1‑94 (MQ=36)

                        CGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTG                                                                       >  SRR4302542.6168968/1‑94 (MQ=39)

                        CGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTG                                                                       >  SRR4302542.6145538/1‑94 (MQ=39)

                         GGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTG                                                                       <  SRR4302542.2525779/94‑1 (MQ=39)

                         GGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTG                                                                       >  SRR4302542.4818050/1‑94 (MQ=39)

                         GGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTTAAGAATTGA                                                                      >  SRR4302542.273556/1‑94 (MQ=28)

                         GGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAA‑‑‑T‑‑‑CCCCCCCCcctccccccaacaattttttcttccc                                                                     >  SRR4302542.2847376/1‑68 (MQ=0)

                         GGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGCGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCCCCACCACTTTAAAAAATTGA                                                                      >  SRR4302542.6575521/1‑94 (MQ=1)

                          GAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGGCCC‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTG                                                                       <  SRR4302542.1661523/94‑1 (MQ=34)

                          GAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAA                                                                     <  SRR4302542.6262503/94‑1 (MQ=44)

                          GAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAA                                                                     <  SRR4302542.3961418/94‑1 (MQ=44)

                           AATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGCC‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAA                                                                     <  SRR4302542.7603326/94‑1 (MQ=41)

                           AATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGCC‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAA                                                                     <  SRR4302542.6124005/94‑1 (MQ=41)

                           AATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAAC                                                                    <  SRR4302542.7161184/94‑1 (MQ=47)

                           AATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAAC                                                                    <  SRR4302542.4586539/94‑1 (MQ=47)

                           AATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACT                                                                   <  SRR4302542.5147880/94‑1 (MQ=52)

                            ATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGC‑‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACT                                                                   <  SRR4302542.2653100/94‑1 (MQ=47)

                            ATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACT                                                                   >  SRR4302542.5446600/1‑94 (MQ=49)

                            ATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACT                                                                   <  SRR4302542.3562647/94‑1 (MQ=49)

                             TTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAAAATTGAACTA                                                                  >  SRR4302542.5149762/1‑94 (MQ=38)

                              TGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAA                                                                 >  SRR4302542.2345402/1‑94 (MQ=54)

                              TGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAA                                                                <  SRR4302542.1293845/94‑1 (MQ=60)

                              TGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAA                                                                >  SRR4302542.1077540/1‑94 (MQ=60)

                               GGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGC‑‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAA                                                                <  SRR4302542.483569/94‑1 (MQ=54)

                               GGTAGACGCGCTAGCTTCAGGGGTTAGTGTCCTTACGGACGTGGGGGTTCAAGC‑‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAA                                                                <  SRR4302542.5965393/94‑1 (MQ=52)

                                  AGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGCC‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAA                                                              <  SRR4302542.349123/94‑1 (MQ=58)

                                  AGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAA                                                              <  SRR4302542.6836598/94‑1 (MQ=60)

                                  AGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAA                                                              <  SRR4302542.6061323/94‑1 (MQ=60)

                                  AGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAA                                                              <  SRR4302542.5370349/94‑1 (MQ=60)

                                  AGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAAT                                                             <  SRR4302542.3589574/94‑1 (MQ=60)

                                  AGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAAT                                                             <  SRR4302542.1112317/94‑1 (MQ=60)

                                  AGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATT                                                            <  SRR4302542.5909322/94‑1 (MQ=60)

                                  AGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATT                                                            >  SRR4302542.2293339/1‑94 (MQ=60)

                                   GACGCGCTGGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGCC‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAAT                                                             <  SRR4302542.6234890/94‑1 (MQ=57)

                                   GACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGGCGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAAT                                                             <  SRR4302542.5375975/94‑1 (MQ=60)

                                   GACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATT                                                            <  SRR4302542.1400494/94‑1 (MQ=60)

                                   GACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTC                                                           >  SRR4302542.2812749/1‑94 (MQ=60)

                                    ACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCA                                                          <  SRR4302542.5968862/94‑1 (MQ=60)

                                     CGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCA                                                          >  SRR4302542.5637397/1‑94 (MQ=60)

                                      GCGCTTGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCA                                                          <  SRR4302542.6395252/94‑1 (MQ=60)

                                      GCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCA                                                          <  SRR4302542.1775837/94‑1 (MQ=60)

                                      GCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAG‑‑‑T‑‑‑CCCCCCCCcctcggccccactttcttttcttttctttttttttcttc                                                        >  SRR4302542.5808754/1‑55 (MQ=0)

                                      GCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAG‑‑‑T‑‑‑CCCCCCCCcccccccccaaaaatctttttttcctttttttttttttt                                                        >  SRR4302542.6458239/1‑55 (MQ=0)

                                       CGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAA                                                         <  SRR4302542.3717285/94‑1 (MQ=60)

                                       CGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAA                                                        >  SRR4302542.4979003/1‑94 (MQ=60)

                                        GCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAA                                                       >  SRR4302542.3370604/1‑94 (MQ=60)

                                        GCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAG‑‑‑T‑‑‑CCCCCCCCccccccccccccccccttaaaaaataaaaaaaaaaataaaa                                                      >  SRR4302542.1442687/1‑53 (MQ=0)

                                         ttggtttagggttTTAGTTTCCTTCCGGCCGTGGGGGTTCAAGCC‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAA                                                       <  SRR4302542.2310501/81‑1 (MQ=60)

                                         CTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAA                                                       <  SRR4302542.3641321/94‑1 (MQ=60)

                                         CTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCCCGCACCCCGACTTTAAAGAATTGAACTAAAAATTCAAAA                                                       >  SRR4302542.7053970/1‑94 (MQ=49)

                                         CTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAA                                                      >  SRR4302542.5030270/1‑94 (MQ=60)

                                         CTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAA                                                      <  SRR4302542.5827442/94‑1 (MQ=60)

                                         CTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCCCGCCTTTTAAGAATTTAAATAAAAATTCAAAAA                                                      >  SRR4302542.1354403/1‑94 (MQ=17)

                                          TAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCCCGCCCCACGACTTTAAAAAATTGAACTAAAAATTCAAAAA                                                      >  SRR4302542.5515189/1‑94 (MQ=38)

                                           AGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGGC‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAG                                                     <  SRR4302542.2917125/94‑1 (MQ=60)

                                           AGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAG                                                     >  SRR4302542.5792807/1‑94 (MQ=60)

                                           AGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGC                                                    >  SRR4302542.6886407/1‑94 (MQ=60)

                                            GCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCA                                                   <  SRR4302542.557390/94‑1 (MQ=60)

                                            GCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAG                                                  <  SRR4302542.6653058/94‑1 (MQ=60)

                                            GCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAG                                                  <  SRR4302542.1623201/94‑1 (MQ=60)

                                             CTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCA                                                   <  SRR4302542.375105/94‑1 (MQ=60)

                                             CTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCA                                                   <  SRR4302542.4044434/94‑1 (MQ=60)

                                             CTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAG                                                  <  SRR4302542.2994633/94‑1 (MQ=60)

                                             CTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGT                                                 >  SRR4302542.7098876/1‑94 (MQ=60)

                                             CTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGT                                                 >  SRR4302542.4457809/1‑94 (MQ=60)

                                                CAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTA                                                <  SRR4302542.7509373/94‑1 (MQ=60)

                                                CAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAT                                               <  SRR4302542.6744448/94‑1 (MQ=60)

                                                 AGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTAT                                               <  SRR4302542.3194100/94‑1 (MQ=60)

                                                 AGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATT                                              <  SRR4302542.7426511/94‑1 (MQ=60)

                                                   GTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTT                                             <  SRR4302542.2009640/94‑1 (MQ=60)

                                                    TGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGCCTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCG                                           >  SRR4302542.4964987/1‑94 (MQ=60)

                                                    TGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCG                                           <  SRR4302542.6424478/94‑1 (MQ=60)

                                                     GTTAGTGTCCTTACGGACGTGGGGGTTCAAGCC‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCG                                           <  SRR4302542.2270537/94‑1 (MQ=60)

                                                     GTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGG                                          <  SRR4302542.792864/94‑1 (MQ=60)

                                                      TTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGG                                          <  SRR4302542.2236363/94‑1 (MQ=60)

                                                       TAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGC                                         <  SRR4302542.3059938/94‑1 (MQ=60)

                                                       TAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGC                                         <  SRR4302542.211573/94‑1 (MQ=60)

                                                       TACTGTCCTTACGGACGTGGGGGTTCAAGGC‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGC                                         <  SRR4302542.7277767/94‑1 (MQ=60)

                                                        AGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCcccccccccaactattttttcttccttttttgtttttttccttctttttctcccttg                                      >  SRR4302542.4152806/1‑37 (MQ=0)

                                                        AGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAG                                      >  SRR4302542.1041915/1‑94 (MQ=60)

                                                         GTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAG                                      <  SRR4302542.4511366/94‑1 (MQ=60)

                                                          TGTCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGT                                     <  SRR4302542.6267092/94‑1 (MQ=60)

                                                          TGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTA                                    <  SRR4302542.5396207/94‑1 (MQ=60)

                                                           GTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCCCCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAG                                      <  SRR4302542.911508/94‑1 (MQ=60)

                                                           GTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGT                                     <  SRR4302542.6655839/94‑1 (MQ=60)

                                                           GTCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAAAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGT                                     >  SRR4302542.1892434/1‑94 (MQ=60)

                                                            TCCTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTA                                    <  SRR4302542.2797872/94‑1 (MQ=60)

                                                            TCCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAG                                   <  SRR4302542.1148382/94‑1 (MQ=60)

                                                             CCTTACGGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGC                                  <  SRR4302542.2594331/94‑1 (MQ=60)

                                                              CTTACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGC                                  <  SRR4302542.542172/94‑1 (MQ=60)

                                                                TACGGACGTGGGGGTTCAAGCCCC‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCG                                 <  SRR4302542.5213861/94‑1 (MQ=60)

                                                                TACGGACGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGC                                >  SRR4302542.1835945/1‑94 (MQ=60)

                                                                  CGGACGTGGGGGTTCAAG‑‑‑T‑‑‑‑CCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTT                           <  SRR4302542.1804895/94‑1 (MQ=60)

                                                                   GGACGTGGGGGTTCAAG‑‑‑TCCCCCCCCCCCTCGCACCACGACTTTAAAAAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAG                              >  SRR4302542.1002781/1‑94 (MQ=60)

                                                                   GGACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCT                            >  SRR4302542.1711149/1‑94 (MQ=60)

                                                                    GACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTT                           <  SRR4302542.1767702/94‑1 (MQ=60)

                                                                     ACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTG                          <  SRR4302542.4929886/94‑1 (MQ=60)

                                                                     ACGTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTG                          <  SRR4302542.951263/94‑1 (MQ=60)

                                                                      CGTGGGGGTTCAAGCC‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTG                          <  SRR4302542.6668283/94‑1 (MQ=60)

                                                                      CGTGGGGGTTCAAGC‑‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGG                         <  SRR4302542.4687852/94‑1 (MQ=60)

                                                                      CGTGGGGGTTCAAGC‑‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGG                         >  SRR4302542.7573962/1‑94 (MQ=60)

                                                                      CGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTG                          <  SRR4302542.6970436/94‑1 (MQ=60)

                                                                      CGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTG                          <  SRR4302542.980730/94‑1 (MQ=60)

                                                                      CGTGGGGGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTG                          <  SRR4302542.2679117/94‑1 (MQ=60)

                                                                       GTGGGGGTTCAAGC‑‑C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGT                        <  SRR4302542.6567831/94‑1 (MQ=60)

                                                                       GTGGGGGTTCAAGAC‑C‑‑‑CCCCCCCCTCGCACCACGGCTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGAATTTCGGCGAGGAGCGCAGCTTGG                         >  SRR4302542.908052/1‑94 (MQ=60)

                                                                       GTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGT                        <  SRR4302542.5460063/94‑1 (MQ=60)

                                                                       GTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGT                        >  SRR4302542.839373/1‑94 (MQ=60)

                                                                       GTGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAAAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGT                        >  SRR4302542.6467364/1‑94 (MQ=60)

                                                                        TGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTA                       >  SRR4302542.6960651/1‑94 (MQ=60)

                                                                        TGGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTA                       >  SRR4302542.3515932/1‑94 (MQ=60)

                                                                        TGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAG                      >  SRR4302542.1083910/1‑94 (MQ=60)

                                                                        TGGGGGGTCAAG‑‑‑TC‑‑CCCCCCCCCCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAACCAGTATTTCGGCGAGTAGCCCAGCTTGGTA                       >  SRR4302542.3515933/1‑94 (MQ=60)

                                                                         GGGGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAG                      <  SRR4302542.3667495/94‑1 (MQ=60)

                                                                           GGGTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCG                    <  SRR4302542.4875616/94‑1 (MQ=60)

                                                                            GGTTCAAG‑‑‑TCC‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCG                    <  SRR4302542.315923/94‑1 (MQ=60)

                                                                             GTTCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCA                  >  SRR4302542.2915382/1‑94 (MQ=60)

                                                                               TCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCTAGTAGCGCAGCTTGGTAGCGCAAC                >  SRR4302542.2352616/1‑94 (MQ=60)

                                                                               TCAAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAAC                <  SRR4302542.1037806/94‑1 (MQ=60)

                                                                                gtttaaaggccCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCG                    <  SRR4302542.3906477/83‑1 (MQ=60)

                                                                                 AAG‑‑‑TC‑‑CCCCCCCCTCGCACCACGACTTTAAAAAATTTAACTAAAAATTCAAAAAACAGTATTTTCGCGAGGAGCGCAGCTTGGTAGGGCCACTG              >  SRR4302542.2540526/1‑94 (MQ=57)

                                                                                 AAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGG             >  SRR4302542.3119802/1‑94 (MQ=60)

                                                                                      agtccCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTG              <  SRR4302542.2936940/89‑1 (MQ=60)

                                                                                       C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTT          <  SRR4302542.1686312/94‑1 (MQ=60)

                                                                                       C‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTT          >  SRR4302542.4474602/1‑94 (MQ=60)

                                                                                        cccCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGT            <  SRR4302542.4750726/91‑1 (MQ=60)

                                                                                         tcCCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTT           <  SRR4302542.2532522/92‑1 (MQ=60)

                                                                                           CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTG         <  SRR4302542.2210616/94‑1 (MQ=60)

                                                                                           CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTG         <  SRR4302542.3046725/94‑1 (MQ=60)

                                                                                           CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTG         >  SRR4302542.4998882/1‑94 (MQ=60)

                                                                                           CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTG         >  SRR4302542.4432866/1‑94 (MQ=60)

                                                                                            CCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGG        >  SRR4302542.7449346/1‑94 (MQ=60)

                                                                                            CCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGG        >  SRR4302542.2061080/1‑94 (MQ=60)

                                                                                            CCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGG        >  SRR4302542.188427/1‑94 (MQ=60)

                                                                                            CCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGG        <  SRR4302542.547507/94‑1 (MQ=60)

                                                                                            CCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGG        <  SRR4302542.7131113/94‑1 (MQ=60)

                                                                                            CCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGG        >  SRR4302542.2596294/1‑94 (MQ=60)

                                                                                             CCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGG       >  SRR4302542.2153786/1‑94 (MQ=60)

                                                                                             CCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGG       <  SRR4302542.1772495/94‑1 (MQ=60)

                                                                                             CCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGG       >  SRR4302542.685841/1‑94 (MQ=60)

                                                                                             CCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGG       >  SRR4302542.5886456/1‑94 (MQ=60)

                                                                                             CCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGG       <  SRR4302542.3283820/94‑1 (MQ=60)

                                                                                              CCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGA      >  SRR4302542.2614394/1‑94 (MQ=60)

                                                                                              CCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGA      <  SRR4302542.326084/94‑1 (MQ=60)

                                                                                              CCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGA      <  SRR4302542.974935/94‑1 (MQ=60)

                                                                                               CCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGAC     >  SRR4302542.3116291/1‑94 (MQ=60)

                                                                                               CCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGAC     >  SRR4302542.6597762/1‑94 (MQ=60)

                                                                                               CCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGAC     <  SRR4302542.4733020/94‑1 (MQ=60)

                                                                                               CCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGAC     >  SRR4302542.1425519/1‑94 (MQ=60)

                                                                                               CCACTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGAC     >  SRR4302542.6640158/1‑94 (MQ=60)

                                                                                                CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACC    >  SRR4302542.5946842/1‑94 (MQ=60)

                                                                                                CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACC    >  SRR4302542.1362245/1‑94 (MQ=60)

                                                                                                CCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACC    >  SRR4302542.7544073/1‑94 (MQ=60)

                                                                                                 CCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCA   >  SRR4302542.3503905/1‑94 (MQ=60)

                                                                                                  CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTGGCGCAACTGGTTTGGGACCAG  <  SRR4302542.3465297/94‑1 (MQ=60)

                                                                                                  CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAG  >  SRR4302542.6319199/1‑94 (MQ=60)

                                                                                                  CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAG  >  SRR4302542.1183888/1‑94 (MQ=60)

                                                                                                  CTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAG  >  SRR4302542.3047875/1‑94 (MQ=60)

GAAGTTGTGACAATGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAG‑‑‑T‑‑‑CCCCCCCCTCGCACCACGACTTTAAAGAATTGAACTAAAAATTCAAAAAGCAGTATTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAG  >  NC_000913/3980205‑3980390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`