Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,001,717 +C coding (86/903 nt) rarD ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,001,7171.C100.0% 1572.7 / NA 482T29R (ACG→AGG) rarDhypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (227/255);  total (227/255)

Only 100 of 517 total aligned reads displayed.

TGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATT  >  NC_000913/4001625‑4001803
                                                                                             |                                                                                      
tGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACg                                                                                         <  1:7225552/93‑1 (MQ=255)
tGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACg                                                                                         >  1:2052660/1‑93 (MQ=255)
 gCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgc                                                                                        <  2:1961586/93‑2 (MQ=255)
 gCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGACTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgc                                                                                        <  2:7382675/93‑2 (MQ=255)
  cTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCGCGTAGTAAATCAACTTGAAGTACgct                                                                                       <  1:4269539/93‑3 (MQ=255)
   tcatcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgctg                                                                                      >  1:1053961/1‑90 (MQ=255)
    catcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgctgg                                                                                     <  1:2842782/93‑5 (MQ=255)
    catcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACgctgg                                                                                     <  1:2621651/93‑5 (MQ=255)
      tcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGgcg                                                                                   >  1:1020629/1‑93 (MQ=255)
      tcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGgcg                                                                                   >  1:2892201/1‑93 (MQ=255)
       caGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGgcgc                                                                                  <  1:3802064/93‑1 (MQ=255)
         acaacaccaTAAAGAAAAACGACCAGATCAAGCAATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACAAGAAGTACGCTGGCGCta                                                                                <  2:932384/89‑1 (MQ=255)
          caccacCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCtat                                                                               <  2:3506425/93‑1 (MQ=255)
           accaccATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTTAAGTACGCTGGCGCtata                                                                              >  1:4325871/1‑93 (MQ=255)
            ccaccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAc                                                                             >  1:1954820/1‑93 (MQ=255)
             caccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAcc                                                                            >  1:631955/1‑93 (MQ=255)
             caccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAcc                                                                            <  2:287070/93‑1 (MQ=255)
             caccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAcc                                                                            <  2:381887/93‑1 (MQ=255)
              accaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAccc                                                                           >  2:3143442/1‑93 (MQ=255)
              accaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAccc                                                                           >  2:3276069/1‑93 (MQ=255)
               ccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAcccc                                                                          <  1:1510538/93‑1 (MQ=255)
                caTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCa                                                                         >  2:7232068/1‑93 (MQ=255)
                 aTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaa                                                                        >  1:482496/1‑93 (MQ=255)
                 aTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaa                                                                        >  1:1608142/1‑93 (MQ=255)
                  tAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaa                                                                       >  1:4693448/1‑93 (MQ=255)
                   aaaGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaat                                                                      <  1:2314409/93‑1 (MQ=255)
                   aaaGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaat                                                                      >  2:6622708/1‑93 (MQ=255)
                   aaaGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaat                                                                      <  1:181519/93‑1 (MQ=255)
                    aaGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaata                                                                     >  1:6227442/1‑93 (MQ=255)
                        aaaaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaataaaat                                                                 <  2:3982067/93‑1 (MQ=255)
                        aaaaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaataaaat                                                                 <  2:3404586/93‑1 (MQ=255)
                        aaaaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaataaaat                                                                 >  1:3186363/1‑93 (MQ=255)
                         aaaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCaaataaaata                                                                <  2:5617462/93‑1 (MQ=255)
                          aaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAaataaaataa                                                               <  1:2796486/93‑1 (MQ=255)
                            cGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGc                                                             <  2:68539/93‑1 (MQ=255)
                             gACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCg                                                            <  2:2500134/93‑1 (MQ=255)
                              aCCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCgg                                                           >  2:4953890/1‑93 (MQ=255)
                              aCCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCgg                                                           <  2:7148656/93‑1 (MQ=255)
                              aCCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCgg                                                           <  2:1530137/93‑1 (MQ=255)
                                cAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCa                                                         >  2:3677030/1‑93 (MQ=255)
                                cAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGCAGGAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCa                                                         >  1:860573/1‑93 (MQ=255)
                                   aTCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAaga                                                      >  1:6979121/1‑93 (MQ=255)
                                     cACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGc                                                    >  1:4955279/1‑93 (MQ=255)
                                     cACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGc                                                    <  1:7450832/93‑1 (MQ=255)
                                     cACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGc                                                    <  1:6474586/93‑1 (MQ=255)
                                      aggcgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCg                                                   <  2:5007654/91‑1 (MQ=255)
                                         cgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGt                                                <  2:593669/93‑1 (MQ=255)
                                           aTGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTaa                                              >  2:5394412/1‑93 (MQ=255)
                                            tGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAAt                                             >  2:585817/1‑93 (MQ=255)
                                               gTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACg                                          <  1:542942/93‑1 (MQ=255)
                                                tCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGc                                         <  1:4431682/93‑1 (MQ=255)
                                                tCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGc                                         >  2:6110573/1‑93 (MQ=255)
                                                tCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGc                                         >  1:1459067/1‑93 (MQ=255)
                                                tCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGc                                         >  2:5284951/1‑93 (MQ=255)
                                                  aGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGccc                                       <  1:6623684/93‑1 (MQ=255)
                                                  aGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGGAATACGccc                                       >  1:7133460/1‑93 (MQ=255)
                                                   ggATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCt                                      >  1:3437330/1‑93 (MQ=255)
                                                    gATTTCATCGGCGGGCACGGAGTAAATCAAATTTAAGTACGCTGGCGCTATACCCCAAATAAAAAAAACGGCAAGAGCGAGGAAAACGCCCTg                                     >  1:1235545/1‑93 (MQ=255)
                                                     aTTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTAAGCTGGCGCTATACCCCAAATAAAATAAACGGCAAGAGCGAGTAAAAAGCCCTGc                                    >  1:736322/1‑93 (MQ=255)
                                                     aTTTCATCGGCGGACGCGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAAAAAAATAAGCGGAAAGAGCGAGAAATACGCCCTGc                                    <  1:3662346/93‑1 (MQ=255)
                                                      tttCATCGGCGGGCACGTAGTAAATCAACTTTAAGTACGCTGGCGCTATACCCCAAATAAAATAAGAGGCAAGAGCGAGTAATAAGCCCTGcc                                   >  1:2973877/1‑93 (MQ=255)
                                                      tttCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGcc                                   >  1:4015377/1‑93 (MQ=255)
                                                         cATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCcgcg                                <  1:5785499/93‑1 (MQ=255)
                                                          aTCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgt                               <  2:4774619/93‑1 (MQ=255)
                                                           tCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtt                              >  2:887711/1‑93 (MQ=255)
                                                           tCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtt                              <  2:6209602/93‑1 (MQ=255)
                                                           tCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtt                              >  2:1645350/1‑93 (MQ=255)
                                                            cggcggGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgttt                             <  1:1113642/93‑1 (MQ=255)
                                                               cggGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGAAAGAGCGAGTAATACGCCCTGCCGCgtttgtt                          <  2:4726376/93‑1 (MQ=255)
                                                                gggCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtttgttt                         >  1:2524585/1‑93 (MQ=255)
                                                                 ggCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGtttt                        <  2:302230/93‑1 (MQ=255)
                                                                 ggCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGtttt                        <  1:7036305/93‑1 (MQ=255)
                                                                    aCGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGca                     >  1:3269075/1‑93 (MQ=255)
                                                                      gtagtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatc                   >  1:4146768/1‑93 (MQ=255)
                                                                       tagtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatcc                  >  2:4334617/1‑93 (MQ=255)
                                                                       tagtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatcc                  >  2:4101275/1‑93 (MQ=255)
                                                                       tagtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatcc                  >  2:1804821/1‑93 (MQ=255)
                                                                         gtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccat                >  2:745580/1‑93 (MQ=255)
                                                                         gtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccat                >  1:1680358/1‑93 (MQ=255)
                                                                         gtaAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccat                >  1:4778499/1‑93 (MQ=255)
                                                                          taAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccatc               <  1:610917/93‑1 (MQ=255)
                                                                          taAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccatc               >  2:1386349/1‑93 (MQ=255)
                                                                          taAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccatc               <  2:1225929/93‑1 (MQ=255)
                                                                          taAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccatc               <  1:337383/93‑1 (MQ=255)
                                                                           aaaTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCg              <  2:2118057/93‑1 (MQ=255)
                                                                           aaaTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCg              <  2:1468834/93‑1 (MQ=255)
                                                                            aaTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCgg             >  2:6959657/1‑93 (MQ=255)
                                                                             aTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCggg            >  1:5260573/1‑93 (MQ=255)
                                                                             aTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCggg            <  2:2016517/93‑1 (MQ=255)
                                                                             aTCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCggg            >  2:446028/1‑93 (MQ=255)
                                                                              tCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGa           <  1:6733154/93‑1 (MQ=255)
                                                                                 aCTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATa        <  2:6462724/93‑1 (MQ=255)
                                                                                 aCTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATa        >  2:1094438/1‑93 (MQ=255)
                                                                                  cTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAc       <  1:451741/93‑1 (MQ=255)
                                                                                   ttGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACt      <  2:6560314/93‑1 (MQ=255)
                                                                                     gAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCa    >  2:5757606/1‑93 (MQ=255)
                                                                                     gAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCa    <  1:5642611/93‑1 (MQ=255)
                                                                                     gAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCa    <  2:4568469/93‑1 (MQ=255)
                                                                                     gAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCa    <  1:5305546/93‑1 (MQ=255)
                                                                                      aaGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAt   <  2:6777081/93‑1 (MQ=255)
                                                                                             |                                                                                      
TGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATT  >  NC_000913/4001625‑4001803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 283 total aligned reads displayed.
ATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATT  >  NC_000913/4001624‑4001810
                                                                                             |                                                                                              
ATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG                                                                                                <  SRR4302542.2235967/94‑1 (MQ=60)
ATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG                                                                                                <  SRR4302542.1693835/94‑1 (MQ=60)
 TGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG‑C                                                                                              <  SRR4302542.7296428/94‑1 (MQ=60)
 TGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG‑C                                                                                              <  SRR4302542.2939107/94‑1 (MQ=60)
  GCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGct                                                                                              <  SRR4302542.6261611/94‑3 (MQ=60)
  GCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGct                                                                                              >  SRR4302542.1834396/1‑92 (MQ=60)
  GCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGct                                                                                              <  SRR4302542.4581141/94‑3 (MQ=60)
  GCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGct                                                                                              <  SRR4302542.2252799/94‑3 (MQ=60)
  GCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGct                                                                                              <  SRR4302542.2731821/94‑3 (MQ=60)
   CTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCGCGTAGTAAATCAACTTGAAGTACGctg                                                                                             <  SRR4302542.4311555/94‑4 (MQ=60)
   CTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGctg                                                                                             >  SRR4302542.1063021/1‑91 (MQ=60)
   CTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGctg                                                                                             >  SRR4302542.5335342/1‑91 (MQ=60)
   CTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGctg                                                                                             >  SRR4302542.6206713/1‑91 (MQ=60)
   CTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGctg                                                                                             <  SRR4302542.2885687/94‑4 (MQ=60)
     CATCAGCACCACCATAAAGAAAAACGACCGGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGC                                                                                           >  SRR4302542.4350342/1‑94 (MQ=60)
     CATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGC                                                                                           <  SRR4302542.2646985/94‑1 (MQ=60)
     CATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGC                                                                                           <  SRR4302542.2870096/94‑1 (MQ=60)
      ATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCG                                                                                          <  SRR4302542.1910074/94‑1 (MQ=60)
      ATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCG                                                                                          >  SRR4302542.1029419/1‑94 (MQ=60)
      ATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCG                                                                                          >  SRR4302542.1694203/1‑94 (MQ=60)
      ATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCG                                                                                          <  SRR4302542.4706194/94‑1 (MQ=60)
      ATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCG                                                                                          >  SRR4302542.2919969/1‑94 (MQ=60)
      ATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCG                                                                                          >  SRR4302542.4308572/1‑94 (MQ=60)
      ATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCG                                                                                          >  SRR4302542.3073406/1‑94 (MQ=60)
        CAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCT                                                                                        <  SRR4302542.293720/94‑1 (MQ=60)
         AGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAACTTGAAGTACGCTGGCGCTA                                                                                       >  SRR4302542.5673654/1‑94 (MQ=60)
          GCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTAT                                                                                      >  SRR4302542.1773195/1‑94 (MQ=60)
           CACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTTAAGTACGCTGGCGCTATA                                                                                     >  SRR4302542.4368402/1‑94 (MQ=60)
           CACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATA                                                                                     <  SRR4302542.1289711/94‑1 (MQ=60)
           CACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATA                                                                                     <  SRR4302542.6509607/94‑1 (MQ=60)
           CACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATA                                                                                     >  SRR4302542.4063009/1‑94 (MQ=60)
           CACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATA                                                                                     <  SRR4302542.3845769/94‑1 (MQ=60)
            ACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAC                                                                                    >  SRR4302542.4782975/1‑94 (MQ=60)
            ACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAC                                                                                    <  SRR4302542.2863425/94‑1 (MQ=60)
            ACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATAC                                                                                    >  SRR4302542.1971729/1‑94 (MQ=60)
             CCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACC                                                                                   >  SRR4302542.637401/1‑94 (MQ=60)
             CCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACC                                                                                   <  SRR4302542.4224596/94‑1 (MQ=60)
             CCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACC                                                                                   <  SRR4302542.3626052/94‑1 (MQ=60)
              CACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCC                                                                                  >  SRR4302542.3521956/1‑94 (MQ=60)
              CACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCC                                                                                  >  SRR4302542.7163066/1‑94 (MQ=60)
              CACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCC                                                                                  >  SRR4302542.1717043/1‑94 (MQ=60)
                CCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCA                                                                                >  SRR4302542.2020492/1‑94 (MQ=60)
                CCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCA                                                                                <  SRR4302542.1523588/94‑1 (MQ=60)
                CCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCA                                                                                <  SRR4302542.7444156/94‑1 (MQ=60)
                 CATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAA                                                                               >  SRR4302542.6871652/1‑94 (MQ=60)
                 CATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAA                                                                               <  SRR4302542.7343235/94‑1 (MQ=60)
                 CATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAA                                                                               >  SRR4302542.1622032/1‑94 (MQ=60)
                 CATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAA                                                                               >  SRR4302542.486677/1‑94 (MQ=60)
                  ATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAA                                                                              >  SRR4302542.4739273/1‑94 (MQ=60)
                   TAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAAATTGAAGTACGCTGGCGCTATACCCCAAAT                                                                             >  SRR4302542.3967737/1‑94 (MQ=60)
                    AAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATA                                                                            <  SRR4302542.2334270/94‑1 (MQ=60)
                    AAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATA                                                                            <  SRR4302542.183057/94‑1 (MQ=60)
                     AAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAA                                                                           >  SRR4302542.7556481/1‑94 (MQ=60)
                        AAAAACGATCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAAT                                                                        <  SRR4302542.163124/94‑1 (MQ=60)
                        AAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAAT                                                                        <  SRR4302542.737286/94‑1 (MQ=60)
                        AAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAAT                                                                        >  SRR4302542.3216547/1‑94 (MQ=60)
                        AAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAAT                                                                        <  SRR4302542.6752105/94‑1 (MQ=60)
                        AAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAAT                                                                        >  SRR4302542.4157329/1‑94 (MQ=60)
                         AAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATA                                                                       <  SRR4302542.108294/94‑1 (MQ=60)
                         AAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATA                                                                       >  SRR4302542.6483908/1‑94 (MQ=60)
                         AAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATA                                                                       <  SRR4302542.4791910/94‑1 (MQ=60)
                          AAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAA                                                                      <  SRR4302542.1579339/94‑1 (MQ=60)
                           AACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAG                                                                     <  SRR4302542.2823392/94‑1 (MQ=60)
                           AACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAG                                                                     <  SRR4302542.2305685/94‑1 (MQ=60)
                           AACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAG                                                                     <  SRR4302542.4467146/94‑1 (MQ=60)
                           AACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAG                                                                     <  SRR4302542.3013171/94‑1 (MQ=60)
                             CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                   <  SRR4302542.824363/94‑1 (MQ=60)
                             CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                   >  SRR4302542.3291487/1‑94 (MQ=60)
                             CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                   <  SRR4302542.6056439/94‑1 (MQ=60)
                             CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                   <  SRR4302542.2877947/94‑1 (MQ=60)
                             CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                   <  SRR4302542.4839732/94‑1 (MQ=60)
                             CGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCG                                                                   <  SRR4302542.186122/94‑1 (MQ=60)
                              GACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGG                                                                  <  SRR4302542.16470/94‑1 (MQ=60)
                              GACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGG                                                                  <  SRR4302542.7467531/94‑1 (MQ=60)
                              GACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGG                                                                  <  SRR4302542.5299430/94‑1 (MQ=60)
                              GACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAACGG                                                                  >  SRR4302542.1479564/1‑94 (MQ=60)
                              GACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAACGG                                                                  >  SRR4302542.5438370/1‑94 (MQ=60)
                               ACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGC                                                                 >  SRR4302542.5878453/1‑94 (MQ=60)
                                CCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGGGCTATACCCCCAATAAAAAAAACGGCA                                                                >  SRR4302542.2742817/1‑94 (MQ=60)
                                CCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCA                                                                <  SRR4302542.721402/94‑1 (MQ=60)
                                CCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCA                                                                <  SRR4302542.1487645/94‑1 (MQ=60)
                                CCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGCAGGAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCA                                                                >  SRR4302542.867985/1‑94 (MQ=60)
                                 CAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAA                                                               <  SRR4302542.7076907/94‑1 (MQ=60)
                                 CAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAACGGCAA                                                               >  SRR4302542.5731028/1‑94 (MQ=60)
                                  AGATCACGCGATGCGTCAGGATTTCATCGGCGGGCCCGTAGGAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCCAG                                                              >  SRR4302542.5480850/1‑94 (MQ=60)
                                  AGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCCAATAAAATAAGCGGCAAG                                                              >  SRR4302542.3449910/1‑94 (MQ=60)
                                  AGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTCAAGAACGCTGGCGCTATAACCCAAATAAAATAAGCGGCAAG                                                              >  SRR4302542.2581546/1‑94 (MQ=60)
                                   GATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGA                                                             <  SRR4302542.2676352/94‑1 (MQ=60)
                                   GATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGA                                                             >  SRR4302542.1053377/1‑94 (MQ=60)
                                   GATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGA                                                             >  SRR4302542.3912735/1‑94 (MQ=60)
                                   GATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGA                                                             <  SRR4302542.2904848/94‑1 (MQ=60)
                                   GATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAAATTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAACGGCAAGA                                                             >  SRR4302542.2507542/1‑94 (MQ=60)
                                    ATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAG                                                            <  SRR4302542.1106767/94‑1 (MQ=60)
                                     TCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGC                                                           <  SRR4302542.6352355/94‑1 (MQ=60)
                                     TCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGC                                                           >  SRR4302542.5003421/1‑94 (MQ=60)
                                      CACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCG                                                          <  SRR4302542.6538373/94‑1 (MQ=60)
                                        CGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAG                                                        <  SRR4302542.3337882/94‑1 (MQ=60)
                                         GCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGT                                                       <  SRR4302542.7067327/94‑1 (MQ=60)
                                         GCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGT                                                       <  SRR4302542.2411505/94‑1 (MQ=60)
                                          CGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTTAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGGA                                                      >  SRR4302542.5253222/1‑94 (MQ=60)
                                          CGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTA                                                      <  SRR4302542.4190995/94‑1 (MQ=60)
                                          CGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTA                                                      <  SRR4302542.1992474/94‑1 (MQ=60)
                                          CGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAAAAAGCGGCAAGAGCGAGTA                                                      >  SRR4302542.4941198/1‑94 (MQ=60)
                                           GATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAA                                                     >  SRR4302542.4846088/1‑94 (MQ=60)
                                           GATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAA                                                     <  SRR4302542.6370572/94‑1 (MQ=60)
                                            ATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAAT                                                    <  SRR4302542.2858977/94‑1 (MQ=60)
                                            ATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAAT                                                    >  SRR4302542.1045523/1‑94 (MQ=60)
                                             TGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGTCAAGAGCGAGTAATA                                                   <  SRR4302542.1229381/94‑1 (MQ=60)
                                             TGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATA                                                   <  SRR4302542.3753467/94‑1 (MQ=60)
                                             TGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATA                                                   <  SRR4302542.6170227/94‑1 (MQ=60)
                                             TGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATA                                                   <  SRR4302542.2388821/94‑1 (MQ=60)
                                             TGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAAAGCGAGTAATA                                                   >  SRR4302542.4477085/1‑94 (MQ=60)
                                              GCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATAC                                                  <  SRR4302542.711687/94‑1 (MQ=60)
                                               CGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACG                                                 >  SRR4302542.6952050/1‑94 (MQ=60)
                                               CGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACG                                                 >  SRR4302542.1209262/1‑94 (MQ=60)
                                                GTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGC                                                >  SRR4302542.1557831/1‑94 (MQ=60)
                                                GTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGC                                                <  SRR4302542.547633/94‑1 (MQ=60)
                                                GTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGC                                                >  SRR4302542.4437911/1‑94 (MQ=60)
                                                GTCAGGATTTCATCGGCGGGCACGTAGGAAATCAAATTGAAGTACGCTGGGGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGGAATACGC                                                >  SRR4302542.109416/1‑94 (MQ=60)
                                                  CAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCC                                              <  SRR4302542.1745339/94‑1 (MQ=60)
                                                  CAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCC                                              >  SRR4302542.6537211/1‑94 (MQ=60)
                                                  CAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCC                                              >  SRR4302542.5437484/1‑94 (MQ=60)
                                                  CAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGGAATACGCCC                                              >  SRR4302542.7203465/1‑94 (MQ=60)
                                                   AGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCT                                             <  SRR4302542.676351/94‑1 (MQ=60)
                                                   AGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCT                                             <  SRR4302542.7271816/94‑1 (MQ=60)
                                                    GGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTG                                            <  SRR4302542.3792060/94‑1 (MQ=60)
                                                    GGATTTCATCGGCGGGCACGGAGTAAATCAAATTTAAGTACGCTGGCGCTATACCCCAAATAAAAAAAACGGCAAGAGCGAGGAAAACGCCCTG                                            >  SRR4302542.1246171/1‑94 (MQ=57)
                                                     GATTTAATCGGCGGGCACGGAGATAAACAAATTGAAGTACGCTGGGGCAATACCCCAAATAAAATAAGCGGCAAGAGCGAGGAATACGCCCccc                                           >  SRR4302542.5735069/1‑91 (MQ=31)
                                                      ATTTCATCGGCGGGCACGTAGTAAATCAACTTTAAGTACGCTGGCGCTATACCCCAAATAAAATAAGAGGCAAGAGCGAGTAATAAGCCCTGCC                                          >  SRR4302542.3002359/1‑94 (MQ=60)
                                                      ATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCC                                          >  SRR4302542.4335178/1‑94 (MQ=60)
                                                      ATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCC                                          <  SRR4302542.3730315/94‑1 (MQ=60)
                                                      ATTTCATCGGCGGACGCGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAAAAAAATAAGCGGAAAGAGCGAGAAATACGCCCTGCC                                          <  SRR4302542.3696958/94‑1 (MQ=60)
                                                        TTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGC                                        >  SRR4302542.6603380/1‑94 (MQ=60)
                                                         attactcgctcttgccgcttattttACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCG                                       >  SRR4302542.4574063/26‑94 (MQ=60)
                                                         TCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCG                                       >  SRR4302542.3509615/1‑94 (MQ=60)
                                                         TCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCG                                       <  SRR4302542.4170511/94‑1 (MQ=60)
                                                         TCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAACGGCAAGAGCGAGGAATACGCCCCGCCGCG                                       >  SRR4302542.6351526/1‑94 (MQ=60)
                                                           ATCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTT                                     <  SRR4302542.3261649/94‑1 (MQ=60)
                                                            TCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTT                                    <  SRR4302542.4907752/94‑1 (MQ=60)
                                                            TCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTT                                    <  SRR4302542.4420895/94‑1 (MQ=60)
                                                            TCGGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTT                                    <  SRR4302542.4699332/94‑1 (MQ=60)
                                                              GGCGGGCACGTAGTAAATCAACTTGAAGTACGCTGGTGCTATACACCAAATAAAAAAAGCCGATAGAGCGAGGAATACGCCCTGCCGCGcttgc                                  >  SRR4302542.3376873/1‑89 (MQ=48)
                                                                CGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTT                                <  SRR4302542.528948/94‑1 (MQ=60)
                                                                CGGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTT                                >  SRR4302542.2549064/1‑94 (MQ=60)
                                                                 GGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTT                               >  SRR4302542.1870389/1‑94 (MQ=60)
                                                                 GGGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTT                               <  SRR4302542.3092852/94‑1 (MQ=60)
                                                                  GGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTG                              <  SRR4302542.4538670/94‑1 (MQ=60)
                                                                  GGCACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTG                              <  SRR4302542.7105420/94‑1 (MQ=60)
                                                                    CACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCA                            >  SRR4302542.3299934/1‑94 (MQ=60)
                                                                     ACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCAT                           >  SRR4302542.3841970/1‑94 (MQ=60)
                                                                     ACGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCAT                           >  SRR4302542.5461418/1‑94 (MQ=60)
                                                                      CGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATC                          >  SRR4302542.3408540/1‑94 (MQ=60)
                                                                      CGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATC                          >  SRR4302542.4187618/1‑94 (MQ=60)
                                                                      CGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATC                          >  SRR4302542.344080/1‑94 (MQ=60)
                                                                      CGTAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATC                          >  SRR4302542.6569066/1‑94 (MQ=60)
                                                                        TAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCA                        <  SRR4302542.3349717/94‑1 (MQ=60)
                                                                        TAGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCA                        >  SRR4302542.4844700/1‑94 (MQ=60)
                                                                         AGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCAT                       >  SRR4302542.7066545/1‑94 (MQ=60)
                                                                         AGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCAT                       >  SRR4302542.4825082/1‑94 (MQ=60)
                                                                         AGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCAT                       >  SRR4302542.5767073/1‑94 (MQ=60)
                                                                         AGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCAT                       <  SRR4302542.1523479/94‑1 (MQ=60)
                                                                         AGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCAT                       <  SRR4302542.5631844/94‑1 (MQ=60)
                                                                         AGTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCAT                       >  SRR4302542.7554202/1‑94 (MQ=60)
                                                                          GTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATC                      >  SRR4302542.7134691/1‑94 (MQ=60)
                                                                          GTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATC                      >  SRR4302542.6670639/1‑94 (MQ=60)
                                                                          GTAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATC                      >  SRR4302542.5324240/1‑94 (MQ=60)
                                                                           TAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCG                     <  SRR4302542.340311/94‑1 (MQ=60)
                                                                           TAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCG                     <  SRR4302542.7234506/94‑1 (MQ=60)
                                                                           TAAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCG                     <  SRR4302542.616172/94‑1 (MQ=60)
                                                                            AAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGG                    >  SRR4302542.1584026/1‑94 (MQ=60)
                                                                            AAATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGG                    <  SRR4302542.7500785/94‑1 (MQ=60)
                                                                             AATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGG                   <  SRR4302542.144212/94‑1 (MQ=60)
                                                                             AATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGG                   >  SRR4302542.4353548/1‑94 (MQ=60)
                                                                             AATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGG                   >  SRR4302542.5311693/1‑94 (MQ=60)
                                                                             AATCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGG                   >  SRR4302542.2297444/1‑94 (MQ=60)
                                                                               TCAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAA                 <  SRR4302542.6799430/94‑1 (MQ=60)
                                                                                CAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAAT                >  SRR4302542.7399550/1‑94 (MQ=60)
                                                                                CAACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAAT                <  SRR4302542.2568924/94‑1 (MQ=60)
                                                                                  ACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAC              <  SRR4302542.4489293/94‑1 (MQ=60)
                                                                                  ACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAC              >  SRR4302542.1425592/1‑94 (MQ=60)
                                                                                  ACTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAC              >  SRR4302542.5924928/1‑94 (MQ=60)
                                                                                   CTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACT             <  SRR4302542.455644/94‑1 (MQ=60)
                                                                                   CTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACT             <  SRR4302542.1979996/94‑1 (MQ=60)
                                                                                   CTTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACT             <  SRR4302542.6957831/94‑1 (MQ=60)
                                                                                    TTGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTC            <  SRR4302542.3231797/94‑1 (MQ=60)
                                                                                     TGAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCA           >  SRR4302542.1144234/1‑94 (MQ=60)
                                                                                      GAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAT          <  SRR4302542.1044880/94‑1 (MQ=60)
                                                                                      GAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAT          <  SRR4302542.5697402/94‑1 (MQ=60)
                                                                                      GAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAT          >  SRR4302542.5030566/1‑94 (MQ=60)
                                                                                      GAAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAT          <  SRR4302542.5357091/94‑1 (MQ=60)
                                                                                       AAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATT         <  SRR4302542.6698523/94‑1 (MQ=60)
                                                                                       AAGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATT         >  SRR4302542.4689059/1‑94 (MQ=60)
                                                                                        AGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTT        >  SRR4302542.6356334/1‑94 (MQ=60)
                                                                                        AGTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTT        >  SRR4302542.2363900/1‑94 (MQ=60)
                                                                                         GTACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTT       <  SRR4302542.3492654/94‑1 (MQ=60)
                                                                                          TACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTT      <  SRR4302542.5594748/94‑1 (MQ=60)
                                                                                          TACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTT      <  SRR4302542.750183/94‑1 (MQ=60)
                                                                                          TACGCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTT      <  SRR4302542.5339886/94‑1 (MQ=60)
                                                                                          TACGCTGGCGCTATACCCCAAATAAAATAAGAGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTT      >  SRR4302542.295613/1‑94 (MQ=60)
                                                                                             C‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATT  <  SRR4302542.7499908/94‑1 (MQ=60)
                                                                                             |                                                                                              
ATGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTACG‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAATT  >  NC_000913/4001624‑4001810

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑