Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,006,483 +C coding (183/207 nt) b4554 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,006,4801.C98.1% 1577.1 / 17.0 474coding (186/207 nt)b4554hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (7/2);  new base C (252/213);  total (259/215)
Fisher's exact test for biased strand distribution p-value = 1.93e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01

Only 100 of 518 total aligned reads displayed.

GGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG  >  NC_000913/4006388‑4006567
                                                                                             |                                                                                        
ggcgCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGt                                                                                           >  2:4953654/1‑93 (MQ=255)
  cgcgcCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑cc                                                                                        <  1:7378785/93‑1 (MQ=255)
  cgcgcCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑cc                                                                                        <  2:7443886/93‑1 (MQ=255)
   gcgcCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑ccc                                                                                       <  1:5537956/93‑1 (MQ=255)
    cgcCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑cccc                                                                                      >  1:4403099/1‑92 (MQ=255)
      ccACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑ccccaa                                                                                    >  2:2363034/1‑90 (MQ=255)
       cACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑ccccaac                                                                                   >  2:3501215/1‑89 (MQ=255)
         ctgctgGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCC‑CAaccc                                                                                >  1:433099/1‑93 (MQ=255)
         ctgctgGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCC‑CAaccc                                                                                >  2:6492556/1‑93 (MQ=255)
            ctgGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCTCTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCAc                                                                              <  1:6857902/93‑1 (MQ=255)
            ctgGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCAc                                                                              <  2:6693945/93‑1 (MQ=255)
             tgGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACg                                                                             >  1:1906545/1‑93 (MQ=255)
             tgGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACg                                                                             >  1:2373278/1‑93 (MQ=255)
               gATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGcc                                                                           >  1:5771798/1‑93 (MQ=255)
               gATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGcc                                                                           >  1:6416836/1‑93 (MQ=255)
                 ttCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCaa                                                                         >  1:3887972/1‑93 (MQ=255)
                 ttCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCaa                                                                         >  1:1541873/1‑93 (MQ=255)
                  tCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAAc                                                                        >  1:6621077/1‑93 (MQ=255)
                  tCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAAc                                                                        <  2:4864009/93‑1 (MQ=255)
                   cccAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAAcc                                                                       >  2:4337020/1‑93 (MQ=255)
                    ccAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCa                                                                      >  2:794325/1‑93 (MQ=255)
                     cAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAg                                                                     <  2:2965813/93‑1 (MQ=255)
                      aGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGc                                                                    >  1:3375427/1‑93 (MQ=255)
                      aGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGc                                                                    >  1:1013152/1‑93 (MQ=255)
                       gCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGca                                                                   >  1:1680609/1‑93 (MQ=255)
                       gCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGca                                                                   <  2:596971/93‑1 (MQ=255)
                        ccAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGcac                                                                  <  1:4725675/93‑1 (MQ=255)
                         cAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGcaca                                                                 >  1:6158303/1‑93 (MQ=255)
                          aaaTCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACaa                                                                <  1:4114877/93‑1 (MQ=255)
                            aTCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAata                                                              <  2:1890838/93‑1 (MQ=255)
                              cAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATg                                                            <  1:36136/93‑1 (MQ=255)
                               aaGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGa                                                           <  1:1200256/93‑1 (MQ=255)
                                aGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGaa                                                          >  2:1693005/1‑93 (MQ=255)
                                aGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGaa                                                          >  1:7279558/1‑93 (MQ=255)
                                aGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGaa                                                          <  1:2949023/93‑1 (MQ=255)
                                   aaGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCg                                                       <  1:875823/93‑1 (MQ=255)
                                    aGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGc                                                      <  1:423357/93‑1 (MQ=255)
                                    aGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGc                                                      >  2:2791609/1‑93 (MQ=255)
                                       cgcgCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGAGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAg                                                   <  2:4580911/93‑1 (MQ=255)
                                        gcgcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGt                                                  <  1:3453185/93‑1 (MQ=255)
                                        gcgcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGt                                                  >  2:7013984/1‑93 (MQ=255)
                                         cgcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTc                                                 >  2:2451904/1‑93 (MQ=255)
                                         cgcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTc                                                 <  1:2439839/93‑1 (MQ=255)
                                          gcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTcc                                                >  1:2175158/1‑93 (MQ=255)
                                          gcCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTcc                                                <  2:4383912/93‑1 (MQ=255)
                                               cccACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCt                                           >  2:5833230/1‑93 (MQ=255)
                                                ccACTTCAACACTTAAAACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTg                                          >  2:6442895/1‑93 (MQ=255)
                                                 cacttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGa                                         >  1:6802808/1‑93 (MQ=255)
                                                 cacttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGa                                         >  2:7272552/1‑93 (MQ=255)
                                                  acttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGaa                                        <  2:7190918/93‑1 (MQ=255)
                                                  acttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGaa                                        >  2:927126/1‑93 (MQ=255)
                                                   cttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAg                                       >  1:6201327/1‑93 (MQ=255)
                                                   cttcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAg                                       >  2:5410/1‑93 (MQ=255)
                                                    tctcacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGc                                      >  1:7114787/5‑93 (MQ=255)
                                                     tcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGcc                                     >  2:5723077/1‑93 (MQ=255)
                                                     tcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGcc                                     <  1:6107754/93‑1 (MQ=255)
                                                     tcaacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGcc                                     <  1:4912344/93‑1 (MQ=255)
                                                      caacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGccc                                    >  1:2801995/1‑93 (MQ=255)
                                                       aacacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCa                                   >  2:6871657/1‑93 (MQ=255)
                                                       aacacttcaaACGCAATCACTGAGCGGGAAAATAGCGT‑CCCAAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCa                                   <  2:1057125/93‑1 (MQ=255)
                                                        acacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGcccgg                                  <  1:2646943/93‑3 (MQ=255)
                                                         cacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGc                                 >  2:4182339/1‑93 (MQ=255)
                                                         cacttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGc                                 >  2:2626960/1‑93 (MQ=255)
                                                          acttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCa                                <  1:2139162/93‑1 (MQ=255)
                                                          acttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCa                                >  2:2131945/1‑93 (MQ=255)
                                                          acttcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCa                                >  2:2011847/1‑93 (MQ=255)
                                                             tcaaACGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATa                             >  1:2567685/1‑93 (MQ=255)
                                                               aaaCGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGa                           >  2:5328091/1‑93 (MQ=255)
                                                               aaaCGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGa                           >  1:5021628/1‑93 (MQ=255)
                                                               aaaCGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGa                           <  1:3175224/93‑1 (MQ=255)
                                                                aaCGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAc                          <  1:4623551/93‑1 (MQ=255)
                                                                aaCGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAc                          >  2:3388017/1‑93 (MQ=255)
                                                                aaCGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAc                          <  1:1743032/93‑1 (MQ=255)
                                                                 aCGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACg                         >  1:6558050/1‑93 (MQ=255)
                                                                 aCGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACg                         >  2:4712819/1‑93 (MQ=255)
                                                                  cGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGc                        <  2:3982837/93‑1 (MQ=255)
                                                                  cGCAATCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGc                        >  1:7025406/1‑93 (MQ=255)
                                                                     aaTCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAc                     <  2:6358699/93‑1 (MQ=255)
                                                                     aaTCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAc                     <  2:509628/93‑1 (MQ=255)
                                                                      aTCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAcc                    >  1:5850325/1‑93 (MQ=255)
                                                                       tCACTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccg                   >  2:2029683/1‑93 (MQ=255)
                                                                         aCTGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcg                 >  2:1312789/1‑93 (MQ=255)
                                                                           tGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAcggcgcc               >  2:1139792/1‑93 (MQ=255)
                                                                           tGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgcc               >  2:2496803/1‑93 (MQ=255)
                                                                           tGAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgcc               <  2:1457557/93‑1 (MQ=255)
                                                                            gAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccg              >  1:5251243/1‑93 (MQ=255)
                                                                            gAGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccg              >  2:3116493/1‑93 (MQ=255)
                                                                             aGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccgc             <  2:3721046/93‑1 (MQ=255)
                                                                             aGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccgc             >  2:1396456/1‑93 (MQ=255)
                                                                             aGCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccgc             <  1:5431711/93‑1 (MQ=255)
                                                                              gCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGGCGCCAccgcgccgcg            >  1:3742748/1‑93 (MQ=255)
                                                                              gCGGGAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAccgcgccgcg            >  1:5666510/1‑93 (MQ=255)
                                                                                gggAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGAt          >  1:1260389/1‑93 (MQ=255)
                                                                                 ggAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATa         >  1:3282933/1‑93 (MQ=255)
                                                                                 ggAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATa         >  2:38424/1‑93 (MQ=255)
                                                                                 ggAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATa         <  2:2746561/93‑1 (MQ=255)
                                                                                  gAAAATAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATaa        <  2:1238050/93‑1 (MQ=255)
                                                                                       tAGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTg   >  2:5570449/1‑93 (MQ=255)
                                                                                        aGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTgg  <  2:6085672/93‑1 (MQ=255)
                                                                                        aGCGTCCCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTgg  <  1:454944/93‑1 (MQ=255)
                                                                                             |                                                                                        
GGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCC‑AACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG  >  NC_000913/4006388‑4006567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 278 total aligned reads displayed.
CGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  >  NC_000913/4006390‑4006576
                                                                                              |                                                                                             
CGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCC                                                                                               >  SRR4302542.7401556/1‑94 (MQ=60)
 GCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCC                                                                                              <  SRR4302542.6174496/94‑1 (MQ=60)
 GCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCC                                                                                              <  SRR4302542.5591792/94‑1 (MQ=60)
 GCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCC                                                                                              >  SRR4302542.4446333/1‑94 (MQ=60)
  CGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCCA                                                                                             >  SRR4302542.6709607/1‑94 (MQ=60)
   GCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCcaa                                                                                            >  SRR4302542.1220254/1‑91 (MQ=60)
   GCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCcaa                                                                                            >  SRR4302542.4670808/1‑91 (MQ=60)
   GCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCcaa                                                                                            >  SRR4302542.7632/1‑91 (MQ=60)
    CCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAAC                                                                                            >  SRR4302542.7407752/1‑94 (MQ=60)
    CCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAAC                                                                                            >  SRR4302542.1094223/1‑94 (MQ=60)
     CACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACC                                                                                           >  SRR4302542.7137533/1‑94 (MQ=60)
     CACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACC                                                                                           >  SRR4302542.6048430/1‑94 (MQ=60)
     CACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACC                                                                                           <  SRR4302542.245510/94‑1 (MQ=60)
      ACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCC                                                                                          >  SRR4302542.436849/1‑94 (MQ=60)
      ACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCC                                                                                          >  SRR4302542.32511/1‑94 (MQ=60)
       CTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCC                                                                                         >  SRR4302542.4354979/1‑94 (MQ=60)
       CTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCC                                                                                         >  SRR4302542.3390246/1‑94 (MQ=60)
       CTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCC                                                                                         >  SRR4302542.7003382/1‑94 (MQ=60)
       CTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCC                                                                                         >  SRR4302542.6637459/1‑94 (MQ=60)
        TGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCA                                                                                        >  SRR4302542.6249871/1‑94 (MQ=60)
        TGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCA                                                                                        >  SRR4302542.6249872/1‑94 (MQ=60)
        TGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCA                                                                                        >  SRR4302542.1861214/1‑94 (MQ=60)
          CTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCTCTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACG                                                                                      <  SRR4302542.6925297/94‑1 (MQ=60)
          CTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACG                                                                                      >  SRR4302542.4251891/1‑94 (MQ=60)
          CTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACG                                                                                      >  SRR4302542.2394288/1‑94 (MQ=60)
          CTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACG                                                                                      >  SRR4302542.1923019/1‑94 (MQ=60)
          CTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACG                                                                                      <  SRR4302542.7141984/94‑1 (MQ=60)
           TGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGC                                                                                     >  SRR4302542.6400692/1‑94 (MQ=60)
           TGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGC                                                                                     >  SRR4302542.1367812/1‑94 (MQ=60)
           TGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAAACACTGAGCGGGAAAATAGCGTCCCCAACCCCACGC                                                                                     >  SRR4302542.5539994/1‑94 (MQ=60)
            GGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCC                                                                                    >  SRR4302542.6480074/1‑94 (MQ=60)
            GGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCC                                                                                    >  SRR4302542.5827821/1‑94 (MQ=60)
            GGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCC                                                                                    >  SRR4302542.1065155/1‑94 (MQ=60)
             GATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACACAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCA                                                                                   <  SRR4302542.7213517/94‑1 (MQ=60)
              ATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAA                                                                                  >  SRR4302542.1555187/1‑94 (MQ=60)
              ATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAA                                                                                  >  SRR4302542.4524558/1‑94 (MQ=60)
              ATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAA                                                                                  >  SRR4302542.3926357/1‑94 (MQ=60)
               TTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAAC                                                                                 <  SRR4302542.7232743/94‑1 (MQ=60)
                TCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACC                                                                                <  SRR4302542.6193628/94‑1 (MQ=60)
                CCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACC                                                                                <  SRR4302542.6993811/94‑1 (MQ=60)
                 CCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCA                                                                               >  SRR4302542.2595280/1‑94 (MQ=60)
                   CAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGC                                                                             >  SRR4302542.1021879/1‑94 (MQ=60)
                    AGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCA                                                                            >  SRR4302542.1792562/1‑94 (MQ=60)
                    AGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCA                                                                            >  SRR4302542.7164753/1‑94 (MQ=60)
                    AGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCA                                                                            >  SRR4302542.1695151/1‑94 (MQ=60)
                      CCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACA                                                                          <  SRR4302542.5012337/94‑1 (MQ=60)
                      CCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACA                                                                          >  SRR4302542.6217949/1‑94 (MQ=60)
                      CCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACA                                                                          <  SRR4302542.4771731/94‑1 (MQ=60)
                      CCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACA                                                                          <  SRR4302542.4771729/94‑1 (MQ=60)
                       CAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAA                                                                         >  SRR4302542.4172473/1‑94 (MQ=60)
                        AAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAAT                                                                        >  SRR4302542.4329829/1‑94 (MQ=60)
                        AAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAAT                                                                        <  SRR4302542.4155422/94‑1 (MQ=60)
                        AAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAAT                                                                        >  SRR4302542.5318831/1‑94 (MQ=60)
                         AATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATA                                                                       <  SRR4302542.3394796/94‑1 (MQ=60)
                         AATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATA                                                                       >  SRR4302542.6673730/1‑94 (MQ=60)
                         AATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATA                                                                       <  SRR4302542.5426505/94‑1 (MQ=60)
                         AATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATA                                                                       <  SRR4302542.1719000/94‑1 (MQ=60)
                          ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATAT                                                                      >  SRR4302542.440672/1‑94 (MQ=60)
                          ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATAT                                                                      <  SRR4302542.5745989/94‑1 (MQ=60)
                          ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATAT                                                                      >  SRR4302542.4029864/1‑94 (MQ=60)
                          ATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATAT                                                                      <  SRR4302542.371915/94‑1 (MQ=60)
                            CAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGA                                                                    >  SRR4302542.2278077/1‑94 (MQ=60)
                            CAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGA                                                                    <  SRR4302542.36459/94‑1 (MQ=60)
                            CAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGA                                                                    <  SRR4302542.2401099/94‑1 (MQ=60)
                             AAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAA                                                                   >  SRR4302542.7350952/1‑94 (MQ=60)
                             AAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAA                                                                   <  SRR4302542.1210589/94‑1 (MQ=60)
                             AAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAA                                                                   >  SRR4302542.4518911/1‑94 (MQ=60)
                             AAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAA                                                                   <  SRR4302542.3586866/94‑1 (MQ=60)
                              AGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAAT                                                                  <  SRR4302542.2977256/94‑1 (MQ=60)
                               GTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATC                                                                 <  SRR4302542.2715953/94‑1 (MQ=60)
                               GTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATC                                                                 <  SRR4302542.3675981/94‑1 (MQ=60)
                                 AAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGC                                                               >  SRR4302542.7224991/1‑94 (MQ=60)
                                 AAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGC                                                               >  SRR4302542.6497197/1‑94 (MQ=60)
                                 AAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGC                                                               <  SRR4302542.883378/94‑1 (MQ=60)
                                  AGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCC                                                              >  SRR4302542.6887390/1‑94 (MQ=60)
                                   GCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCA                                                             <  SRR4302542.2048506/94‑1 (MQ=60)
                                    CCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAG                                                            <  SRR4302542.4599567/94‑1 (MQ=60)
                                     CGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGT                                                           <  SRR4302542.688205/94‑1 (MQ=60)
                                      GCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTC                                                          <  SRR4302542.3485488/94‑1 (MQ=60)
                                      GCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTC                                                          <  SRR4302542.3425213/94‑1 (MQ=60)
                                      GCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTC                                                          <  SRR4302542.19570/94‑1 (MQ=60)
                                      GCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTC                                                          <  SRR4302542.6501997/94‑1 (MQ=60)
                                       CGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCC                                                         >  SRR4302542.4310729/1‑94 (MQ=60)
                                       CGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCC                                                         <  SRR4302542.2463584/94‑1 (MQ=60)
                                       CGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCC                                                         >  SRR4302542.2193882/1‑94 (MQ=60)
                                         CCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGG                                                       >  SRR4302542.1236199/1‑94 (MQ=60)
                                         CCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGG                                                       <  SRR4302542.1186523/94‑1 (MQ=60)
                                         CCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGG                                                       >  SRR4302542.2535821/1‑94 (MQ=60)
                                          CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      >  SRR4302542.7013615/1‑94 (MQ=60)
                                          CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      >  SRR4302542.6573650/1‑94 (MQ=60)
                                          CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      >  SRR4302542.4440111/1‑94 (MQ=60)
                                          CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      >  SRR4302542.1270714/1‑94 (MQ=60)
                                          CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      <  SRR4302542.2701392/94‑1 (MQ=60)
                                          CTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGT                                                      >  SRR4302542.2424508/1‑94 (MQ=60)
                                            GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    >  SRR4302542.6192954/1‑94 (MQ=60)
                                            GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    >  SRR4302542.1820742/1‑94 (MQ=60)
                                            GCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCT                                                    <  SRR4302542.1718353/94‑1 (MQ=60)
                                             CCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTG                                                   <  SRR4302542.2158144/94‑1 (MQ=60)
                                             CCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTG                                                   >  SRR4302542.7151978/1‑94 (MQ=60)
                                              CCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGA                                                  >  SRR4302542.6869693/1‑94 (MQ=60)
                                               CACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGNN                                                 >  SRR4302542.1844536/1‑94 (MQ=60)
                                               CACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAA                                                 <  SRR4302542.2616391/94‑1 (MQ=60)
                                               CACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAA                                                 >  SRR4302542.2040200/1‑94 (MQ=60)
                                               CACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAA                                                 >  SRR4302542.3482550/1‑94 (MQ=60)
                                                ACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAG                                                >  SRR4302542.6262011/1‑94 (MQ=60)
                                                 gtctcACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGC                                               >  SRR4302542.7184630/6‑94 (MQ=60)
                                                 CTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGC                                               >  SRR4302542.7391782/1‑94 (MQ=60)
                                                 CTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGC                                               <  SRR4302542.340990/94‑1 (MQ=60)
                                                  TTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCC                                              >  SRR4302542.4413939/1‑94 (MQ=60)
                                                   TCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCC                                             <  SRR4302542.6166870/94‑1 (MQ=60)
                                                   TCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCC                                             <  SRR4302542.4960122/94‑1 (MQ=60)
                                                   TAAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCC                                             >  SRR4302542.4920969/1‑94 (MQ=60)
                                                    CAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCA                                            >  SRR4302542.6287342/1‑94 (MQ=60)
                                                     AACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAG                                           <  SRR4302542.688394/94‑1 (MQ=60)
                                                     AACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAG                                           <  SRR4302542.4364495/94‑1 (MQ=60)
                                                     AACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAG                                           <  SRR4302542.5169812/94‑1 (MQ=60)
                                                     AACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAG                                           <  SRR4302542.5918889/94‑1 (MQ=60)
                                                      ACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCGGC                                          <  SRR4302542.2672490/94‑1 (MQ=60)
                                                      ACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGC                                          <  SRR4302542.66419/94‑1 (MQ=60)
                                                       CACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCA                                         >  SRR4302542.4719975/1‑94 (MQ=60)
                                                       CACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCA                                         >  SRR4302542.551059/1‑94 (MQ=60)
                                                        ACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAA                                        >  SRR4302542.3833568/1‑94 (MQ=60)
                                                         CTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAT                                       <  SRR4302542.2903234/94‑1 (MQ=60)
                                                         CTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAT                                       >  SRR4302542.607360/1‑94 (MQ=60)
                                                         CTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAT                                       <  SRR4302542.5801810/94‑1 (MQ=60)
                                                         CTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAT                                       <  SRR4302542.2308976/94‑1 (MQ=60)
                                                         CTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAAT                                       >  SRR4302542.320435/1‑94 (MQ=60)
                                                          TTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATA                                      >  SRR4302542.4643773/1‑94 (MQ=60)
                                                          TTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATA                                      <  SRR4302542.6403864/94‑1 (MQ=60)
                                                            CAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGA                                    >  SRR4302542.2955933/1‑94 (MQ=60)
                                                            CAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGA                                    >  SRR4302542.5070387/1‑94 (MQ=60)
                                                             AAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   >  SRR4302542.4721868/1‑94 (MQ=60)
                                                             AAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   <  SRR4302542.5633078/94‑1 (MQ=60)
                                                             AAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   <  SRR4302542.3205327/94‑1 (MQ=60)
                                                             AAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   <  SRR4302542.354756/94‑1 (MQ=60)
                                                             AAACGCAATCACGGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGAC                                   <  SRR4302542.2575446/94‑1 (MQ=60)
                                                              AACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACG                                  >  SRR4302542.6622692/1‑94 (MQ=60)
                                                              AACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACG                                  <  SRR4302542.4668724/94‑1 (MQ=60)
                                                              AACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACG                                  >  SRR4302542.5041656/1‑94 (MQ=60)
                                                              AACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACG                                  <  SRR4302542.1758162/94‑1 (MQ=60)
                                                                CGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                >  SRR4302542.5864044/1‑94 (MQ=60)
                                                                CGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                >  SRR4302542.2657129/1‑94 (MQ=60)
                                                                CGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                <  SRR4302542.832936/94‑1 (MQ=60)
                                                                CGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                >  SRR4302542.482325/1‑94 (MQ=60)
                                                                CGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                >  SRR4302542.3698637/1‑94 (MQ=60)
                                                                CGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCC                                <  SRR4302542.1687727/94‑1 (MQ=60)
                                                                  CAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAC                              >  SRR4302542.6794467/1‑94 (MQ=60)
                                                                  CAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAC                              >  SRR4302542.1558555/1‑94 (MQ=60)
                                                                   AATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             >  SRR4302542.2843092/1‑94 (MQ=60)
                                                                   AATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             <  SRR4302542.91148/94‑1 (MQ=60)
                                                                   AATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             >  SRR4302542.5907067/1‑94 (MQ=60)
                                                                   AATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             >  SRR4302542.5895712/1‑94 (MQ=60)
                                                                   AATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACC                             >  SRR4302542.3869341/1‑94 (MQ=60)
                                                                    ATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCG                            <  SRR4302542.2190485/94‑1 (MQ=60)
                                                                      CACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCG                          >  SRR4302542.2144860/1‑94 (MQ=60)
                                                                      CACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCG                          >  SRR4302542.3435542/1‑94 (MQ=60)
                                                                       ACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGC                         >  SRR4302542.4196816/1‑94 (MQ=60)
                                                                       ACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGC                         >  SRR4302542.3349868/1‑94 (MQ=60)
                                                                        CTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCC                        >  SRR4302542.2741207/1‑94 (MQ=60)
                                                                        CTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCC                        >  SRR4302542.2595257/1‑94 (MQ=60)
                                                                        CTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCAACGCGNN                        >  SRR4302542.3147755/1‑94 (MQ=60)
                                                                         TGAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCG                       >  SRR4302542.5302288/1‑94 (MQ=60)
                                                                          GAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGC                      >  SRR4302542.5843524/1‑94 (MQ=60)
                                                                          GAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGC                      >  SRR4302542.4595451/1‑94 (MQ=60)
                                                                          GAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGC                      >  SRR4302542.3538293/1‑94 (MQ=60)
                                                                          GAGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGC                      <  SRR4302542.5604344/94‑1 (MQ=60)
                                                                           AGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGGCGCCACCGCGCCGCG                     >  SRR4302542.3779786/1‑94 (MQ=60)
                                                                           AGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCG                     <  SRR4302542.2945244/94‑1 (MQ=60)
                                                                           AGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCG                     >  SRR4302542.5721547/1‑94 (MQ=60)
                                                                           AGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCG                     >  SRR4302542.7524263/1‑94 (MQ=60)
                                                                           AGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCG                     <  SRR4302542.5484493/94‑1 (MQ=60)
                                                                           AGCGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCG                     <  SRR4302542.5638916/94‑1 (MQ=60)
                                                                             CGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGAT                   <  SRR4302542.4118612/94‑1 (MQ=60)
                                                                             CGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGAT                   <  SRR4302542.2480337/94‑1 (MQ=60)
                                                                             CGGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGAT                   <  SRR4302542.5193606/94‑1 (MQ=60)
                                                                              GGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATA                  <  SRR4302542.6692394/94‑1 (MQ=60)
                                                                              GGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATA                  <  SRR4302542.5437765/94‑1 (MQ=60)
                                                                              GGGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATA                  >  SRR4302542.3313899/1‑94 (MQ=60)
                                                                               GGAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAA                 >  SRR4302542.5089362/1‑94 (MQ=60)
                                                                                GAAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAAC                >  SRR4302542.1443240/1‑94 (MQ=60)
                                                                                 AAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACC               >  SRR4302542.2172782/1‑94 (MQ=60)
                                                                                 AAAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACC               >  SRR4302542.2382154/1‑94 (MQ=60)
                                                                                  AAATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCG              <  SRR4302542.1694912/94‑1 (MQ=60)
                                                                                   AATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGT             >  SRR4302542.946926/1‑94 (MQ=60)
                                                                                   AATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGT             >  SRR4302542.6988976/1‑94 (MQ=60)
                                                                                    ATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            <  SRR4302542.6261665/94‑1 (MQ=60)
                                                                                    ATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            <  SRR4302542.5502986/94‑1 (MQ=60)
                                                                                    ATAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTG            <  SRR4302542.304478/94‑1 (MQ=60)
                                                                                     TAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG           <  SRR4302542.4571898/94‑1 (MQ=60)
                                                                                     TAGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGG           >  SRR4302542.3207010/1‑94 (MQ=60)
                                                                                      AGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGT          <  SRR4302542.843096/94‑1 (MQ=60)
                                                                                      AGCGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGT          <  SRR4302542.4247072/94‑1 (MQ=60)
                                                                                        CGTCCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTG        >  SRR4302542.4441529/1‑94 (MQ=60)
                                                                                         gtcCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGA       >  SRR4302542.6754536/4‑94 (MQ=60)
                                                                                          tcCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAG      <  SRR4302542.352737/92‑1 (MQ=60)
                                                                                          tcCCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAG      <  SRR4302542.1837488/92‑1 (MQ=60)
                                                                                            CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCG    >  SRR4302542.7322683/1‑94 (MQ=60)
                                                                                            CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCG    >  SRR4302542.396008/1‑94 (MQ=60)
                                                                                             CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGA   >  SRR4302542.3791279/1‑94 (MQ=60)
                                                                                             CCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGA   >  SRR4302542.1277660/1‑94 (MQ=60)
                                                                                              |                                                                                             
CGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCAACCCCACGCCAACCAGCACAATATGAATCGCCAGTCCGGTCTGAAGCCCAGCAATAGACGCCACCGCGCCGCGATAACCGTGGTTGAGCGAG  >  NC_000913/4006390‑4006576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑