Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,007,907 +GG intergenic (+109/‑11) pldB → / → b4555 lysophospholipase L(2)/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,007,9071.G92.9% 1620.3 / 107.1 506intergenic (+109/‑11)pldB/b4555lysophospholipase L(2)/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (21/15);  new base G (245/225);  total (266/240)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.13e-01
*NC_0009134,007,9072.G92.9% 1620.0 / 107.1 506intergenic (+109/‑11)pldB/b4555lysophospholipase L(2)/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (21/15);  new base G (245/225);  total (266/240)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.80e-02

Only 100 of 544 total aligned reads displayed.

GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCT  >  NC_000913/4007815‑4007996
                                                                                             ||                                                                                         
gttgttGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCgcgcgc                                                                                             <  1:2017977/93‑1 (MQ=255)
 ttgttgCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCgcgcgcg                                                                                            <  2:6970413/93‑2 (MQ=255)
  tgttgCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCgcgcgcgg                                                                                           >  1:807806/1‑91 (MQ=255)
   gttgCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCgcgcgcggc                                                                                          >  2:7288327/1‑90 (MQ=255)
           tGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACtt                                                                                  >  1:6747736/1‑93 (MQ=255)
            gATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACttt                                                                                 >  1:2813422/1‑93 (MQ=255)
             aTTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTtg                                                                                <  2:4609783/93‑1 (MQ=255)
              tttAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTtgt                                                                               >  2:4711996/1‑93 (MQ=255)
                tAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTgtgt                                                                             >  2:5039626/1‑93 (MQ=255)
                 aGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGtt                                                                            <  1:6498693/93‑1 (MQ=255)
                  gATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGttt                                                                           >  2:4854651/1‑93 (MQ=255)
                  gATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGttt                                                                           <  1:396926/93‑1 (MQ=255)
                  gATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGttt                                                                           <  1:5793612/93‑1 (MQ=255)
                    tGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGc                                                                         <  2:5241722/93‑1 (MQ=255)
                    tGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGc                                                                         >  2:4527880/1‑93 (MQ=255)
                     ggCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCg                                                                        <  2:4429868/93‑1 (MQ=255)
                      gCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGa                                                                       <  1:7157888/93‑1 (MQ=255)
                       cACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGAc                                                                      <  2:3406068/93‑1 (MQ=255)
                       cACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGAc                                                                      <  2:7043524/93‑1 (MQ=255)
                        aCGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGAcc                                                                     <  2:163631/93‑1 (MQ=255)
                         cGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCg                                                                    <  1:519565/93‑1 (MQ=255)
                         cGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCg                                                                    >  2:1313634/1‑93 (MQ=255)
                           ttACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgt                                                                  <  2:6583604/93‑1 (MQ=255)
                           ttACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgt                                                                  <  2:956609/93‑1 (MQ=255)
                            tACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtc                                                                 >  1:6960091/1‑93 (MQ=255)
                             aCTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtcg                                                                <  1:3386232/93‑1 (MQ=255)
                             aCTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtcg                                                                <  2:1502640/93‑1 (MQ=255)
                              cTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtcgt                                                               <  2:2468824/93‑1 (MQ=255)
                              cTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtcgt                                                               <  2:1209532/93‑1 (MQ=255)
                              cTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtcgt                                                               >  1:1861644/1‑93 (MQ=255)
                               tttCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtcgtc                                                              >  2:6842907/1‑93 (MQ=255)
                               tttCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGgtcgtc                                                              >  1:448767/1‑93 (MQ=255)
                                ttCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTca                                                             <  2:669204/93‑1 (MQ=255)
                                ttCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACGCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTca                                                             >  1:6217778/1‑93 (MQ=255)
                                 tctcCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTcac                                                            <  1:2566057/93‑1 (MQ=255)
                                  ctcCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTcacc                                                           >  2:4206429/1‑93 (MQ=255)
                                   tcCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTcacca                                                          >  1:2685147/1‑93 (MQ=255)
                                    cccGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTcaccac                                                         >  2:4021280/1‑93 (MQ=255)
                                    cccGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTcaccac                                                         <  1:6650267/93‑1 (MQ=255)
                                      cGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGt                                                       <  1:3720825/93‑1 (MQ=255)
                                      cGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGt                                                       <  2:3812354/93‑1 (MQ=255)
                                         ccATACGTCATCCCCTTACTCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCACCTTTGTGTTTGCGACCGCTGTTCACCACGTTgt                                                    >  1:7041890/1‑92 (MQ=255)
                                           aTACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtg                                                  >  2:3879063/1‑93 (MQ=255)
                                           aTACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtg                                                  >  1:1058281/1‑93 (MQ=255)
                                            tACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtgt                                                 >  1:5721527/1‑93 (MQ=255)
                                             aCGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAtgtg                                                <  2:2837977/93‑1 (MQ=255)
                                               gTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTggg                                              >  2:6473092/1‑93 (MQ=255)
                                               gTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTggg                                              <  2:2179138/93‑1 (MQ=255)
                                                  aTCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCa                                           >  2:3682623/1‑93 (MQ=255)
                                                  aTCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCa                                           <  1:951554/93‑1 (MQ=255)
                                                    ccccTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaaa                                         <  1:5108248/93‑1 (MQ=255)
                                                    ccccTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaaa                                         <  2:2083087/93‑1 (MQ=255)
                                                    ccccTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCaaa                                         <  1:5935591/93‑1 (MQ=255)
                                                     cccTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAt                                        >  1:2181967/1‑93 (MQ=255)
                                                      ccTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAtt                                       >  2:2690715/1‑93 (MQ=255)
                                                       cTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTc                                      >  1:6155180/1‑93 (MQ=255)
                                                        ttACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcg                                     >  1:1247725/1‑93 (MQ=255)
                                                        ttACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcg                                     >  2:1917817/1‑93 (MQ=255)
                                                        ttACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTcg                                     >  2:75463/1‑93 (MQ=255)
                                                           cGCCAAAGAGACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGa                                  <  1:1007851/93‑1 (MQ=255)
                                                           cGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGa                                  <  1:1368981/93‑1 (MQ=255)
                                                            gCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAt                                 >  1:3081487/1‑93 (MQ=255)
                                                            gCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAt                                 >  2:5426830/1‑93 (MQ=255)
                                                            gCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAt                                 >  1:2333553/1‑93 (MQ=255)
                                                             ccAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATa                                >  2:2344294/1‑93 (MQ=255)
                                                             ccAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATa                                >  1:2469024/1‑93 (MQ=255)
                                                               aaaGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAAt                              >  2:314821/1‑93 (MQ=255)
                                                               aaaGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAAt                              <  1:155648/93‑1 (MQ=255)
                                                                 aGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCt                            >  1:1948257/1‑93 (MQ=255)
                                                                 aGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCt                            <  1:2949058/93‑1 (MQ=255)
                                                                  gAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTg                           <  2:5854693/93‑1 (MQ=255)
                                                                  gAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTg                           >  1:1098324/1‑93 (MQ=255)
                                                                   aaaCTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTgg                          >  1:5637021/1‑93 (MQ=255)
                                                                    aaCTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga                         >  1:6573949/1‑93 (MQ=255)
                                                                    aaCTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGga                         <  2:3284494/93‑1 (MQ=255)
                                                                      ctctGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGgaga                       >  2:6931058/1‑93 (MQ=255)
                                                                       tctGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAt                      <  1:736040/93‑1 (MQ=255)
                                                                       tctGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAt                      >  2:6386156/1‑93 (MQ=255)
                                                                        ctGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAtt                     >  1:6350828/1‑93 (MQ=255)
                                                                        ctGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAtt                     >  2:3537426/1‑93 (MQ=255)
                                                                         tGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTa                    >  1:1675250/1‑93 (MQ=255)
                                                                         tGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTa                    <  1:3213359/93‑1 (MQ=255)
                                                                          gAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTaa                   >  1:3582579/1‑93 (MQ=255)
                                                                           aaGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCCCCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAg                  <  1:3472769/93‑1 (MQ=255)
                                                                            aGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGt                 >  1:4776290/1‑93 (MQ=255)
                                                                            aGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGt                 <  2:5925676/93‑1 (MQ=255)
                                                                              ctgctCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCt               >  2:2917284/1‑93 (MQ=255)
                                                                               tgctCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCtt              >  2:4972745/1‑93 (MQ=255)
                                                                                gctCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTa             <  2:5693211/93‑1 (MQ=255)
                                                                                gctCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTa             <  2:5626111/93‑1 (MQ=255)
                                                                                gctCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTa             <  2:4117181/93‑1 (MQ=255)
                                                                                   ccgcgcgcgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGa        <  1:4210282/90‑1 (MQ=255)
                                                                                    cgcgcgcgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGAt       >  1:4969283/3‑93 (MQ=255)
                                                                                    cgcgcgcgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGAt       <  2:1837918/91‑1 (MQ=255)
                                                                                     gcgcgcgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGAtt      >  2:6162928/2‑93 (MQ=255)
                                                                                     gcgcgcgG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGAtt      >  1:5364982/2‑93 (MQ=255)
                                                                                       gcgcgg‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTAc    <  2:3045329/93‑1 (MQ=255)
                                                                                        cgcgg‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTAcc   <  2:2290733/93‑1 (MQ=255)
                                                                                         gcgg‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCCCCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCt  <  1:4562380/93‑1 (MQ=255)
                                                                                         gcgg‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCt  >  1:7457942/1‑93 (MQ=255)
                                                                                             ||                                                                                         
GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCT  >  NC_000913/4007815‑4007996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 304 total aligned reads displayed.
GGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCAA  >  NC_000913/4007814‑4008000
                                                                                               |                                                                                               
GGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGC                                                                                                 <  SRR4302542.1525085/94‑1 (MQ=60)
GGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGC                                                                                                 >  SRR4302542.6785237/1‑94 (MQ=60)
GGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGC                                                                                                 <  SRR4302542.4837065/94‑1 (MQ=60)
GGATGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGC                                                                                                 >  SRR4302542.3640533/1‑94 (MQ=60)
 GTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGC‑‑G                                                                                              <  SRR4302542.2035434/94‑1 (MQ=60)
  TTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCgg                                                                                               >  SRR4302542.814758/1‑92 (MQ=60)
  TTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCgg                                                                                               >  SRR4302542.4317631/1‑92 (MQ=60)
    GTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCggca                                                                                             <  SRR4302542.5104072/94‑5 (MQ=60)
     TTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCggcat                                                                                            >  SRR4302542.6156247/1‑89 (MQ=60)
      TGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATC                                                                                           >  SRR4302542.4064066/1‑94 (MQ=60)
       GCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCA                                                                                          <  SRR4302542.3766242/94‑1 (MQ=60)
       GCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCA                                                                                          <  SRR4302542.1669731/94‑1 (MQ=60)
       GCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCA                                                                                          >  SRR4302542.5479373/1‑94 (MQ=60)
        CGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAA                                                                                         >  SRR4302542.1604319/1‑94 (MQ=60)
        CGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAA                                                                                         >  SRR4302542.514855/1‑94 (MQ=60)
         GTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAAC                                                                                        >  SRR4302542.5341165/1‑94 (MQ=60)
         GTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAAC                                                                                        <  SRR4302542.4585327/94‑1 (MQ=60)
         GTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAAC                                                                                        >  SRR4302542.3488433/1‑94 (MQ=60)
         GTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAAC                                                                                        <  SRR4302542.7081799/94‑1 (MQ=60)
          TCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACT                                                                                       >  SRR4302542.3565939/1‑94 (MQ=60)
           CTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTT                                                                                      >  SRR4302542.6814134/1‑94 (MQ=60)
            TGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTT                                                                                     >  SRR4302542.2840492/1‑94 (MQ=60)
            TGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTT                                                                                     >  SRR4302542.3380787/1‑94 (MQ=60)
             GATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTG                                                                                    >  SRR4302542.2472126/1‑94 (MQ=60)
                   GATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTG                                                                              <  SRR4302542.400362/94‑1 (MQ=60)
                   GATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTG                                                                              >  SRR4302542.2190690/1‑94 (MQ=60)
                   GATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTG                                                                              <  SRR4302542.5849849/94‑1 (MQ=60)
                    ATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGC                                                                             <  SRR4302542.2783648/94‑1 (MQ=60)
                    ATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGC                                                                             >  SRR4302542.5209054/1‑94 (MQ=60)
                    ATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGC                                                                             >  SRR4302542.1194537/1‑94 (MQ=60)
                    ATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGC                                                                             <  SRR4302542.3396948/94‑1 (MQ=60)
                    ATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGC                                                                             <  SRR4302542.3396949/94‑1 (MQ=60)
                    ATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGC                                                                             <  SRR4302542.7166880/94‑1 (MQ=60)
                    ATAGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGC                                                                             >  SRR4302542.227905/1‑94 (MQ=60)
                     TGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCG                                                                            >  SRR4302542.7468300/1‑94 (MQ=60)
                     TGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCG                                                                            >  SRR4302542.398781/1‑94 (MQ=60)
                       GCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGAC                                                                          <  SRR4302542.4697943/94‑1 (MQ=60)
                       GCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGAC                                                                          <  SRR4302542.7228107/94‑1 (MQ=60)
                        CACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACC                                                                         <  SRR4302542.5942821/94‑1 (MQ=60)
                        CACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACC                                                                         >  SRR4302542.4858992/1‑94 (MQ=60)
                        CACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACC                                                                         <  SRR4302542.2961823/94‑1 (MQ=60)
                         ACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCG                                                                        >  SRR4302542.3956726/1‑94 (MQ=60)
                          CGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGG                                                                       <  SRR4302542.3095002/94‑1 (MQ=60)
                          CGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGG                                                                       >  SRR4302542.2087767/1‑94 (MQ=60)
                          CGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGG                                                                       <  SRR4302542.524062/94‑1 (MQ=60)
                           GTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGT                                                                      <  SRR4302542.382626/94‑1 (MQ=60)
                           GTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGT                                                                      >  SRR4302542.5864713/1‑94 (MQ=60)
                           GTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGT                                                                      >  SRR4302542.4937621/1‑94 (MQ=60)
                            TTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTC                                                                     >  SRR4302542.2119933/1‑94 (MQ=60)
                            TTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTC                                                                     <  SRR4302542.7277569/94‑1 (MQ=60)
                              ACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGT                                                                   >  SRR4302542.5916875/1‑94 (MQ=60)
                               CTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTC                                                                  >  SRR4302542.452647/1‑94 (MQ=60)
                                TTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCA                                                                 >  SRR4302542.3738215/1‑94 (MQ=60)
                                  TCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACC                                                               <  SRR4302542.6181250/94‑1 (MQ=60)
                                  TCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACC                                                               <  SRR4302542.2590924/94‑1 (MQ=60)
                                  TCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACC                                                               <  SRR4302542.1997596/94‑1 (MQ=60)
                                   CTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCA                                                              >  SRR4302542.7096597/1‑94 (MQ=60)
                                   CTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCA                                                              >  SRR4302542.2711039/1‑94 (MQ=60)
                                   CTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCA                                                              >  SRR4302542.1602099/1‑94 (MQ=60)
                                    TCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCAC                                                             >  SRR4302542.2654998/1‑94 (MQ=60)
                                    TCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCAC                                                             <  SRR4302542.2534762/94‑1 (MQ=60)
                                     CCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCTCGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACG                                                            >  SRR4302542.6581847/1‑94 (MQ=60)
                                     CCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACG                                                            >  SRR4302542.2508688/1‑94 (MQ=60)
                                      CCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGT                                                           >  SRR4302542.2629779/1‑94 (MQ=60)
                                       CGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTT                                                          <  SRR4302542.2754365/94‑1 (MQ=60)
                                       CGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTT                                                          <  SRR4302542.3667193/94‑1 (MQ=60)
                                       CGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTT                                                          <  SRR4302542.3521654/94‑1 (MQ=60)
                                        GACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTG                                                         <  SRR4302542.2584821/94‑1 (MQ=60)
                                        GACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTG                                                         <  SRR4302542.4565446/94‑1 (MQ=60)
                                         ACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGA                                                        >  SRR4302542.575300/1‑94 (MQ=60)
                                         ACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGA                                                        >  SRR4302542.3492930/1‑94 (MQ=60)
                                         ACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGA                                                        >  SRR4302542.133906/1‑94 (MQ=60)
                                         ACCATACGTCATCCCCTTACTCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCACCTTTGTGTTTGCGACCGCTGTTCACCACGTTGT                                                        >  SRR4302542.7111056/1‑94 (MQ=60)
                                          CCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAT                                                       <  SRR4302542.7416199/94‑1 (MQ=60)
                                          CCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAT                                                       <  SRR4302542.5204647/94‑1 (MQ=60)
                                          CCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAT                                                       >  SRR4302542.75974/1‑94 (MQ=60)
                                          CCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAT                                                       >  SRR4302542.1082242/1‑94 (MQ=60)
                                          CCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGAT                                                       >  SRR4302542.520975/1‑94 (MQ=60)
                                           CATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATG                                                      >  SRR4302542.1067377/1‑94 (MQ=60)
                                            ATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGT                                                     <  SRR4302542.5704330/94‑1 (MQ=60)
                                            ATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGT                                                     >  SRR4302542.5777064/1‑94 (MQ=60)
                                            ATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGT                                                     >  SRR4302542.1099375/1‑94 (MQ=60)
                                            ATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGT                                                     >  SRR4302542.6672693/1‑94 (MQ=60)
                                            ATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGT                                                     <  SRR4302542.435782/94‑1 (MQ=60)
                                             TACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTG                                                    <  SRR4302542.4162335/94‑1 (MQ=60)
                                             TACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTG                                                    <  SRR4302542.1045641/94‑1 (MQ=60)
                                             TACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTG                                                    <  SRR4302542.1805366/94‑1 (MQ=60)
                                             TACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTG                                                    <  SRR4302542.4879259/94‑1 (MQ=60)
                                              ACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGG                                                   <  SRR4302542.7306608/94‑1 (MQ=60)
                                               CGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGG                                                  >  SRR4302542.7475294/1‑94 (MQ=60)
                                                GTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGG                                                 >  SRR4302542.5306610/1‑94 (MQ=60)
                                                 TTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGC                                                <  SRR4302542.872764/94‑1 (MQ=60)
                                                 TTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGC                                                >  SRR4302542.1920545/1‑94 (MQ=60)
                                                 TTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGC                                                >  SRR4302542.5791721/1‑94 (MQ=60)
                                                  TATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCA                                               >  SRR4302542.1272943/1‑94 (MQ=60)
                                                   ATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAA                                              <  SRR4302542.959728/94‑1 (MQ=60)
                                                   ATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAA                                              >  SRR4302542.4035464/1‑94 (MQ=60)
                                                    TCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAA                                             >  SRR4302542.5505426/1‑94 (MQ=60)
                                                     CCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAT                                            >  SRR4302542.1175807/1‑94 (MQ=60)
                                                     CCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAT                                            <  SRR4302542.5993094/94‑1 (MQ=60)
                                                     CCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAT                                            >  SRR4302542.5811159/1‑94 (MQ=60)
                                                     CCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAT                                            >  SRR4302542.2200758/1‑94 (MQ=60)
                                                     CCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAAT                                            <  SRR4302542.5157867/94‑1 (MQ=60)
                                                      CCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATT                                           >  SRR4302542.1412544/1‑94 (MQ=60)
                                                       CCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTC                                          >  SRR4302542.6214782/1‑94 (MQ=60)
                                                        CTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCG                                         >  SRR4302542.1258450/1‑94 (MQ=60)
                                                        CTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCG                                         <  SRR4302542.1850369/94‑1 (MQ=60)
                                                        CTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCG                                         >  SRR4302542.3145268/1‑94 (MQ=60)
                                                         TTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGC                                        >  SRR4302542.5664368/1‑94 (MQ=60)
                                                          TACGCCAAAGAAACGCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCG                                       <  SRR4302542.2011916/94‑1 (MQ=60)
                                                            CGCCAAAGAGACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAT                                     <  SRR4302542.1016533/94‑1 (MQ=60)
                                                            CGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAT                                     >  SRR4302542.1025396/1‑94 (MQ=60)
                                                            CGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAT                                     >  SRR4302542.3110829/1‑94 (MQ=60)
                                                            CGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAT                                     >  SRR4302542.2353540/1‑94 (MQ=60)
                                                            CGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAT                                     <  SRR4302542.3564783/94‑1 (MQ=60)
                                                            CGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAT                                     <  SRR4302542.1380814/94‑1 (MQ=60)
                                                            CGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAT                                     >  SRR4302542.2892317/1‑94 (MQ=60)
                                                            CGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGAT                                     >  SRR4302542.2707922/1‑94 (MQ=60)
                                                             GCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAGCTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATA                                    >  SRR4302542.6274308/1‑94 (MQ=60)
                                                             GCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATA                                    >  SRR4302542.7540249/1‑94 (MQ=60)
                                                             GCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATA                                    <  SRR4302542.6427539/94‑1 (MQ=60)
                                                              CCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAAGTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAA                                   >  SRR4302542.6272861/1‑94 (MQ=60)
                                                              CCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAA                                   >  SRR4302542.6382120/1‑94 (MQ=60)
                                                              CCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAA                                   >  SRR4302542.6848563/1‑94 (MQ=60)
                                                               CAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAAT                                  <  SRR4302542.1017391/94‑1 (MQ=60)
                                                                AAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATC                                 >  SRR4302542.3042404/1‑94 (MQ=60)
                                                                AAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATC                                 <  SRR4302542.1403062/94‑1 (MQ=60)
                                                                  AGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTG                               <  SRR4302542.6416939/94‑1 (MQ=60)
                                                                  AGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTG                               <  SRR4302542.2977291/94‑1 (MQ=60)
                                                                  AGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTG                               >  SRR4302542.1107733/1‑94 (MQ=60)
                                                                  AGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTG                               <  SRR4302542.6841772/94‑1 (MQ=60)
                                                                  AGAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTG                               <  SRR4302542.1216010/94‑1 (MQ=60)
                                                                   GAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGG                              <  SRR4302542.6204273/94‑1 (MQ=60)
                                                                   GAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGG                              <  SRR4302542.1913535/94‑1 (MQ=60)
                                                                   GAAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGG                              <  SRR4302542.2248564/94‑1 (MQ=60)
                                                                    AAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGA                             <  SRR4302542.1377352/94‑1 (MQ=60)
                                                                    AAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGA                             >  SRR4302542.6638724/1‑94 (MQ=60)
                                                                    AAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGA                             <  SRR4302542.4645170/94‑1 (MQ=60)
                                                                    AAACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGA                             <  SRR4302542.7114085/94‑1 (MQ=60)
                                                                      ACTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGA                           >  SRR4302542.6714936/1‑94 (MQ=60)
                                                                       CTCTGAGGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAT                          >  SRR4302542.6268941/1‑94 (MQ=60)
                                                                       CTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAT                          >  SRR4302542.3442087/1‑94 (MQ=60)
                                                                       CTCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGAT                          >  SRR4302542.4674033/1‑94 (MQ=60)
                                                                        TCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATT                         <  SRR4302542.4363177/94‑1 (MQ=60)
                                                                        TCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATT                         >  SRR4302542.772150/1‑94 (MQ=60)
                                                                        TCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATT                         <  SRR4302542.3461079/94‑1 (MQ=60)
                                                                        TCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATT                         >  SRR4302542.3550628/1‑94 (MQ=60)
                                                                        TCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATT                         <  SRR4302542.6618566/94‑1 (MQ=60)
                                                                        TCTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATT                         <  SRR4302542.742421/94‑1 (MQ=60)
                                                                         CTGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTA                        >  SRR4302542.6525453/1‑94 (MQ=60)
                                                                          TGAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAA                       <  SRR4302542.3243771/94‑1 (MQ=60)
                                                                           GAAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAG                      <  SRR4302542.2900401/94‑1 (MQ=60)
                                                                            AAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGT                     >  SRR4302542.4822845/1‑94 (MQ=60)
                                                                            AAGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGT                     <  SRR4302542.5309460/94‑1 (MQ=60)
                                                                             AGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTC                    >  SRR4302542.6726496/1‑94 (MQ=60)
                                                                             AGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTC                    >  SRR4302542.6558753/1‑94 (MQ=60)
                                                                             AGCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTC                    <  SRR4302542.6636464/94‑1 (MQ=60)
                                                                              GCTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCT                   >  SRR4302542.675693/1‑94 (MQ=60)
                                                                               CTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTT                  <  SRR4302542.7054867/94‑1 (MQ=60)
                                                                               CTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTT                  >  SRR4302542.1665022/1‑94 (MQ=60)
                                                                               CTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTT                  >  SRR4302542.2465031/1‑94 (MQ=60)
                                                                               CTGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTT                  >  SRR4302542.2483823/1‑94 (MQ=60)
                                                                                TGCTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTA                 >  SRR4302542.3191064/1‑94 (MQ=60)
                                                                                  CTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACA               >  SRR4302542.3753572/1‑94 (MQ=60)
                                                                                  CTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACA               <  SRR4302542.2823959/94‑1 (MQ=60)
                                                                                  CTCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACA               >  SRR4302542.3128652/1‑94 (MQ=60)
                                                                                   TCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACAT              <  SRR4302542.1895086/94‑1 (MQ=60)
                                                                                   TCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACAT              <  SRR4302542.6702336/94‑1 (MQ=60)
                                                                                   TCACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACAT              <  SRR4302542.630801/94‑1 (MQ=60)
                                                                                    CACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATG             <  SRR4302542.5193440/94‑1 (MQ=60)
                                                                                    CACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATG             >  SRR4302542.824608/1‑94 (MQ=60)
                                                                                     ACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGA            <  SRR4302542.6367581/94‑1 (MQ=60)
                                                                                     ACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGA            >  SRR4302542.7052463/1‑94 (MQ=60)
                                                                                     ACCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGA            >  SRR4302542.600252/1‑94 (MQ=60)
                                                                                      GCGCG‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTA         >  SRR4302542.5705604/1‑94 (MQ=60)
                                                                                      GCGCG‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTA         <  SRR4302542.4552797/94‑1 (MQ=60)
                                                                                      GCGCG‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCACGATAATCTGGAGATTAAGTCTTACATGATTA         <  SRR4302542.1731678/94‑1 (MQ=60)
                                                                                      CCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGAT           >  SRR4302542.5662658/1‑94 (MQ=60)
                                                                                      CCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGAT           >  SRR4302542.5017530/1‑94 (MQ=60)
                                                                                      CCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGAT           <  SRR4302542.4251779/94‑1 (MQ=60)
                                                                                      CCGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGAT           <  SRR4302542.1762663/94‑1 (MQ=60)
                                                                                       CGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATT          >  SRR4302542.1542310/1‑94 (MQ=60)
                                                                                       CGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATT          >  SRR4302542.1894009/1‑94 (MQ=60)
                                                                                       CGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATT          >  SRR4302542.5417121/1‑94 (MQ=60)
                                                                                       CGCG‑‑CGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATT          <  SRR4302542.5069829/94‑1 (MQ=60)
                                                                                        GCG‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACC       >  SRR4302542.1987115/1‑94 (MQ=60)
                                                                                        GCG‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACC       <  SRR4302542.3903550/94‑1 (MQ=60)
                                                                                        GCG‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACC       <  SRR4302542.631980/94‑1 (MQ=60)
                                                                                        GCG‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACC       <  SRR4302542.6696048/94‑1 (MQ=60)
                                                                                         CG‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCT      <  SRR4302542.7251557/94‑1 (MQ=60)
                                                                                         CG‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCT      >  SRR4302542.7530982/1‑94 (MQ=60)
                                                                                          G‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCCCCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTC     <  SRR4302542.4607051/94‑1 (MQ=60)
                                                                                          G‑‑CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTC     >  SRR4302542.1640602/1‑94 (MQ=60)
                                                                                             CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCC    >  SRR4302542.1357556/1‑94 (MQ=60)
                                                                                             CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCC    >  SRR4302542.7188373/1‑94 (MQ=60)
                                                                                             CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCC    <  SRR4302542.3111162/94‑1 (MQ=60)
                                                                                             CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCC    <  SRR4302542.862102/94‑1 (MQ=60)
                                                                                             CGG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCC    <  SRR4302542.6934109/94‑1 (MQ=60)
                                                                                              GG‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCA   <  SRR4302542.2369534/94‑1 (MQ=60)
                                                                                               G‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCAA  >  SRR4302542.1085162/1‑94 (MQ=60)
                                                                                               |                                                                                               
GGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCG‑‑CGC‑‑CATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCAA  >  NC_000913/4007814‑4008000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑