Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,525	+G	intergenic (+92/‑141)	b4555 → / → yigM	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,524	1	.	G	99.8%	1675.5 / ‑4.8	490	intergenic (+91/‑142)	b4555/yigM	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); major base G (210/279); minor base C (1/0); total (211/279)
Fisher's exact test for biased strand distribution p-value = 4.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01

Only 100 of 513 total aligned reads displayed.

CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGAAA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTT  >  NC_000913/4008434‑4008611

 gggATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑g                                                                                        <  2:3184814/93‑1 (MQ=255)

  ggATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gg                                                                                       <  1:3927470/93‑2 (MQ=255)

    aTGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa                                                                                     <  2:4884585/93‑4 (MQ=255)

    aTGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa                                                                                     >  2:6967813/1‑90 (MQ=255)

       aaCGACGCCGAAATGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg                                                                                   >  2:750328/1‑93 (MQ=255)

       aaCGACGCCGAAATGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg                                                                                   <  2:618312/93‑1 (MQ=255)

        acgacgCCGAAATGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa                                                                                  >  1:7429522/1‑93 (MQ=255)

          gacgCCGAAATGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt                                                                                >  2:7231221/1‑93 (MQ=255)

           acgCCGAAATGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTg                                                                               <  1:5999487/93‑1 (MQ=255)

              ccGAAATGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTa                                                                            <  2:5608195/93‑1 (MQ=255)

               cGAAATGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTAc                                                                           <  2:1132540/93‑1 (MQ=255)

               cGAAATGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTAc                                                                           >  1:5644213/1‑93 (MQ=255)

               cGAAATGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTAc                                                                           <  2:7378296/93‑1 (MQ=255)

                gAAATGCTGTCGATTGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt                                                                          >  1:4472752/1‑93 (MQ=255)

                 aaaTGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa                                                                         >  1:4757559/1‑93 (MQ=255)

                 aaaTGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa                                                                         >  1:1315563/1‑93 (MQ=255)

                  aaTGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTaa                                                                        >  1:6948207/1‑93 (MQ=255)

                   aTGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt                                                                       <  1:6565950/93‑1 (MQ=255)

                   aTGCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt                                                                       >  2:2008583/1‑93 (MQ=255)

                     gCTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGc                                                                     <  1:4406018/93‑1 (MQ=255)

                      cTGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGcc                                                                    >  1:934904/1‑93 (MQ=255)

                       tGTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg                                                                   >  2:6077482/1‑93 (MQ=255)

                        gTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga                                                                  <  1:3626853/93‑1 (MQ=255)

                        gTCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga                                                                  <  1:3777630/93‑1 (MQ=255)

                         tCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac                                                                 <  2:5010537/93‑1 (MQ=255)

                         tCGATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac                                                                 >  1:6710388/1‑93 (MQ=255)

                           gATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga                                                               <  1:1685994/93‑1 (MQ=255)

                           gATGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga                                                               >  2:5296988/1‑93 (MQ=255)

                            aTGGCGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCgacgac                                                              >  1:5502038/1‑93 (MQ=255)

                               gcggggAAA‑GACTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTCGAAGTGATTGGTACTAATGCCGACGAcgcg                                                           >  2:313663/4‑93 (MQ=255)

                                cggggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCgg                                                          <  2:2812139/91‑1 (MQ=255)

                                 ggggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGt                                                         <  1:7215120/92‑1 (MQ=255)

                                 ggggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGt                                                         >  2:3274628/2‑93 (MQ=255)

                                 ggggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGt                                                         <  2:102056/92‑1 (MQ=255)

                                 ggggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGt                                                         <  2:3889327/92‑1 (MQ=255)

                                  gggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTg                                                        >  2:2142183/1‑93 (MQ=255)

                                  gggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTg                                                        >  2:3976953/1‑93 (MQ=255)

                                   ggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCgggtg                                                       >  1:2417064/1‑90 (MQ=255)

                                   ggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGc                                                       <  2:4157325/93‑1 (MQ=255)

                                       agg‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTGCTAATGCCGACGACGCGGTGCCGCa                                                   >  2:3335581/3‑93 (MQ=255)

                                       agg‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCa                                                   <  1:5178275/91‑1 (MQ=255)

                                        gg‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCAt                                                  >  1:160993/2‑93 (MQ=255)

                                           cTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTa                                                <  1:5296634/93‑1 (MQ=255)

                                            tGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTAt                                               <  2:76525/93‑1 (MQ=255)

                                             gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCGGACGACGCGGTGCGGCATTATc                                              >  2:1749897/1‑93 (MQ=255)

                                             gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAGGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc                                              >  2:260286/1‑93 (MQ=255)

                                             gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc                                              <  1:4670403/93‑1 (MQ=255)

                                             gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc                                              <  2:6304180/93‑1 (MQ=255)

                                             gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc                                              >  2:6110596/1‑93 (MQ=255)

                                             gCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATc                                              <  2:1868198/93‑1 (MQ=255)

                                               aTTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTg                                            >  1:2189860/1‑93 (MQ=255)

                                               aTTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTg                                            >  2:247515/1‑93 (MQ=255)

                                                   tGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTa                                        >  2:1443560/1‑93 (MQ=255)

                                                    gggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaa                                       >  1:4223604/1‑93 (MQ=255)

                                                    gggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaa                                       >  1:1796683/1‑93 (MQ=255)

                                                     ggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaaa                                      >  1:3521148/1‑93 (MQ=255)

                                                     ggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaaa                                      <  1:809081/93‑1 (MQ=255)

                                                     ggCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTaaa                                      <  2:6821246/93‑1 (MQ=255)

                                                      gCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAc                                     <  2:4697831/93‑1 (MQ=255)

                                                      gCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAc                                     <  2:1169844/93‑1 (MQ=255)

                                                      gCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAc                                     <  1:1574299/93‑1 (MQ=255)

                                                          tgcgcaccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTa                                 <  1:58526/89‑1 (MQ=255)

                                                          tgcgcaccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTa                                 <  1:3459901/89‑1 (MQ=255)

                                                              caccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTa                             <  2:2224311/93‑1 (MQ=255)

                                                               accaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAt                            >  1:915190/1‑93 (MQ=255)

                                                                ccaGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATc                           >  1:1051107/1‑93 (MQ=255)

                                                                 caGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCg                          >  2:1604358/1‑93 (MQ=255)

                                                                 caGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCg                          <  1:2609874/93‑1 (MQ=255)

                                                                  aGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGt                         <  2:2972727/93‑1 (MQ=255)

                                                                  aGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGt                         >  1:1459785/1‑93 (MQ=255)

                                                                   gCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTa                        <  1:2897921/93‑1 (MQ=255)

                                                                   gCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTa                        >  1:3372816/1‑93 (MQ=255)

                                                                    cGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTaa                       <  2:4236836/93‑1 (MQ=255)

                                                                     gTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAAt                      <  2:6376311/93‑1 (MQ=255)

                                                                     gTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAAt                      <  2:6672661/93‑1 (MQ=255)

                                                                     gTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAAt                      <  2:7441198/93‑1 (MQ=255)

                                                                      tCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATc                     <  2:1974565/93‑1 (MQ=255)

                                                                        tGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGt                   <  2:3609781/93‑1 (MQ=255)

                                                                        tGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGt                   <  1:4291457/93‑1 (MQ=255)

                                                                        tGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGt                   <  2:5665533/93‑1 (MQ=255)

                                                                          aaaGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTc                 <  1:4020871/93‑1 (MQ=255)

                                                                          aaaGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTc                 <  1:2449976/93‑1 (MQ=255)

                                                                          aaaGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTc                 <  2:1284581/93‑1 (MQ=255)

                                                                           aaGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCt                <  1:3048386/93‑1 (MQ=255)

                                                                            aGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCtt               >  2:3747922/1‑93 (MQ=255)

                                                                                cTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAtt           <  2:5775759/93‑1 (MQ=255)

                                                                                 ttCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAttt          >  1:6248083/1‑93 (MQ=255)

                                                                                 ttCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAttt          <  1:1903233/93‑1 (MQ=255)

                                                                                 ttCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAttt          <  1:5372808/93‑1 (MQ=255)

                                                                                  tCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTg         >  1:1382791/1‑93 (MQ=255)

                                                                                   cATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTgg        >  1:5770590/1‑93 (MQ=255)

                                                                                   cATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTgg        >  1:3219479/1‑93 (MQ=255)

                                                                                    aTCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGt       >  1:1225958/1‑93 (MQ=255)

                                                                                    aTCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGt       <  1:4943599/93‑1 (MQ=255)

                                                                                    aTCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGt       <  1:7083791/93‑1 (MQ=255)

                                                                                    aTCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGt       >  2:5129045/1‑93 (MQ=255)

                                                                                      cccGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCa     <  2:4445109/93‑1 (MQ=255)

                                                                                      cccGAGCTGGAAGTGATTGGTACTAATGCCGACAACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCa     >  2:6536725/1‑93 (MQ=255)

                                                                                        cGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGt   <  2:725017/93‑1 (MQ=255)

                                                                                         gAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGtt  >  1:6823837/1‑93 (MQ=255)

CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGAAA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTT  >  NC_000913/4008434‑4008611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 289 total aligned reads displayed.

CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GG‑‑AAA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAACC  >  NC_000913/4008434‑4008618

CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑G                                                                                               >  SRR4302542.117013/1‑94 (MQ=60)

AGGGATGAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑G                                                                                               >  SRR4302542.4559914/1‑94 (MQ=60)

  GGATGAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GGA                                                                                             <  SRR4302542.3966224/94‑1 (MQ=60)

  GGATGAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GGA                                                                                             >  SRR4302542.89664/1‑94 (MQ=60)

  GGATGAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GGA                                                                                             >  SRR4302542.3543542/1‑94 (MQ=60)

    ATGAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAG                                                                                            >  SRR4302542.5788910/1‑94 (MQ=60)

    ATGAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAG                                                                                            <  SRR4302542.7170459/94‑1 (MQ=60)

    ATGAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAG                                                                                            <  SRR4302542.2423220/94‑1 (MQ=60)

    ATGAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAG                                                                                            <  SRR4302542.275784/94‑1 (MQ=60)

     TGAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGT                                                                                           <  SRR4302542.127132/94‑1 (MQ=60)

      GAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTG                                                                                          >  SRR4302542.1898208/1‑94 (MQ=60)

      GAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTG                                                                                          <  SRR4302542.1149863/94‑1 (MQ=60)

       AACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGA                                                                                         >  SRR4302542.4965141/1‑94 (MQ=60)

       AACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGA                                                                                         >  SRR4302542.7502225/1‑94 (MQ=60)

        ACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAT                                                                                        <  SRR4302542.6496147/94‑1 (MQ=60)

        ACGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAT                                                                                        >  SRR4302542.804651/1‑94 (MQ=60)

         CGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATT                                                                                       <  SRR4302542.5246568/94‑1 (MQ=60)

         CGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATT                                                                                       >  SRR4302542.7206434/1‑94 (MQ=60)

         CGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATT                                                                                       <  SRR4302542.5366810/94‑1 (MQ=60)

         CGACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATT                                                                                       >  SRR4302542.93518/1‑94 (MQ=60)

          GACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTG                                                                                      <  SRR4302542.926499/94‑1 (MQ=60)

          GACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTG                                                                                      >  SRR4302542.1375742/1‑94 (MQ=60)

          GACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTG                                                                                      <  SRR4302542.2184939/94‑1 (MQ=60)

           ACGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGG                                                                                     <  SRR4302542.6057594/94‑1 (MQ=60)

            CGCCGAAATGCTGTCGATTGC‑‑GTGG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGT                                                                                    <  SRR4302542.941628/94‑1 (MQ=60)

            CGCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGT                                                                                    <  SRR4302542.4214869/94‑1 (MQ=60)

             GCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTA                                                                                   <  SRR4302542.3229420/94‑1 (MQ=60)

             GCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTA                                                                                   >  SRR4302542.7442644/1‑94 (MQ=60)

             GCCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTA                                                                                   >  SRR4302542.683073/1‑94 (MQ=60)

              CCGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTAC                                                                                  <  SRR4302542.2775570/94‑1 (MQ=60)

               CGAAATGCTGTCGATTGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACT                                                                                 >  SRR4302542.4516623/1‑94 (MQ=60)

               CGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACT                                                                                 >  SRR4302542.3428380/1‑94 (MQ=60)

               CGAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACT                                                                                 <  SRR4302542.3981070/94‑1 (MQ=60)

                GAGATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTA                                                                                <  SRR4302542.5917868/94‑1 (MQ=60)

                GAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTA                                                                                <  SRR4302542.5379769/94‑1 (MQ=60)

                GAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTA                                                                                >  SRR4302542.1326904/1‑94 (MQ=60)

                GAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTA                                                                                >  SRR4302542.4803959/1‑94 (MQ=60)

                GAAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTA                                                                                <  SRR4302542.5501553/94‑1 (MQ=60)

                 AAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAA                                                                               >  SRR4302542.7016478/1‑94 (MQ=60)

                 AAATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAA                                                                               <  SRR4302542.2459952/94‑1 (MQ=60)

                  AATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAT                                                                              <  SRR4302542.975088/94‑1 (MQ=60)

                  AATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAT                                                                              <  SRR4302542.7557882/94‑1 (MQ=60)

                  AATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAT                                                                              >  SRR4302542.2450408/1‑94 (MQ=60)

                  AATGCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAT                                                                              <  SRR4302542.417708/94‑1 (MQ=60)

                    gaaatcctgtcgattgcggggaaaggctgcattatgggtagcgcggacgAGCGTCTGAAAGACCTTCATGCCGAGCTGGAAGTGATTGGTACTA                                                                                >  SRR4302542.840665/50‑94 (MQ=60)

                     GCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCC                                                                           <  SRR4302542.664908/94‑1 (MQ=60)

                     GCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCC                                                                           <  SRR4302542.522300/94‑1 (MQ=60)

                     GCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCC                                                                           >  SRR4302542.942954/1‑94 (MQ=60)

                     GCTGTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCC                                                                           <  SRR4302542.4449290/94‑1 (MQ=60)

                        GTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGAC                                                                        <  SRR4302542.1627799/94‑1 (MQ=60)

                        GTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGAC                                                                        >  SRR4302542.6776491/1‑94 (MQ=60)

                        GTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGAC                                                                        <  SRR4302542.3660641/94‑1 (MQ=60)

                        GTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGAC                                                                        <  SRR4302542.1706888/94‑1 (MQ=60)

                        GTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGAC                                                                        <  SRR4302542.3815007/94‑1 (MQ=60)

                        GTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGAC                                                                        <  SRR4302542.210861/94‑1 (MQ=60)

                        GTCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGAC                                                                        <  SRR4302542.4028989/94‑1 (MQ=60)

                         TCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACG                                                                       <  SRR4302542.3636446/94‑1 (MQ=60)

                         TCGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACG                                                                       <  SRR4302542.76017/94‑1 (MQ=60)

                          CGATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGA                                                                      >  SRR4302542.1793099/1‑94 (MQ=60)

                           GATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAC                                                                     >  SRR4302542.5555519/1‑94 (MQ=60)

                           GATGGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAC                                                                     <  SRR4302542.1700591/94‑1 (MQ=60)

                            ATGGCGGG‑GG‑‑AAG‑GCTGCATTATGGGGAGTGCGCACCAGCGGCTGAAAGACCTTCATCCCGAGCTGGGAGGGATTGGTACTAATGCCGACGACG                                                                    >  SRR4302542.4496968/1‑94 (MQ=42)

                              GGC‑‑G‑GGGAAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCG                                                                  <  SRR4302542.5686466/94‑1 (MQ=60)

                                   gcggggaaagGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGG                                                                 <  SRR4302542.5806576/84‑1 (MQ=60)

                                   G‑GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGgtg                                                              >  SRR4302542.2440564/1‑91 (MQ=60)

                                    cggggaaagGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGT                                                                <  SRR4302542.1735699/85‑1 (MQ=60)

                                    cggggaaagGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGT                                                                >  SRR4302542.1565145/10‑94 (MQ=60)

                                    cggggaaagGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGT                                                                <  SRR4302542.4943817/85‑1 (MQ=60)

                                     ggggaaagGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTG                                                               <  SRR4302542.3564753/86‑1 (MQ=60)

                                     ggggaaagGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTG                                                               <  SRR4302542.2681249/86‑1 (MQ=60)

                                     ggggaaagGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTG                                                               <  SRR4302542.1365604/86‑1 (MQ=60)

                                     ggggaaagGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTG                                                               <  SRR4302542.7285909/86‑1 (MQ=60)

                                     GG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCC                                                             >  SRR4302542.5318198/1‑94 (MQ=60)

                                      G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCG                                                            <  SRR4302542.127578/94‑1 (MQ=60)

                                         AAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGGGATTGGGACTAATGCCGACGACGCGGGGCCGCA                                                          >  SRR4302542.6213465/1‑94 (MQ=60)

                                         AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGC                                                           >  SRR4302542.7352158/1‑94 (MQ=60)

                                         AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGC                                                           >  SRR4302542.3796664/1‑94 (MQ=60)

                                         AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGC                                                           >  SRR4302542.1700078/1‑94 (MQ=60)

                                         AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGC                                                           <  SRR4302542.3345725/94‑1 (MQ=60)

                                           G‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATT                                                        >  SRR4302542.3934760/1‑94 (MQ=60)

                                           G‑GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATT                                                        <  SRR4302542.3946125/94‑1 (MQ=60)

                                             GCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTA                                                       >  SRR4302542.2129670/1‑94 (MQ=60)

                                              CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTAT                                                      <  SRR4302542.910572/94‑1 (MQ=60)

                                               TGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATC                                                     <  SRR4302542.6309641/94‑1 (MQ=60)

                                               TGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATC                                                     <  SRR4302542.5288428/94‑1 (MQ=60)

                                               TGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATC                                                     >  SRR4302542.2937832/1‑94 (MQ=60)

                                               TGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATC                                                     <  SRR4302542.6688071/94‑1 (MQ=60)

                                                GCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCT                                                    >  SRR4302542.6817928/1‑94 (MQ=60)

                                                GCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCT                                                    >  SRR4302542.5175594/1‑94 (MQ=60)

                                                GCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCT                                                    <  SRR4302542.5866035/94‑1 (MQ=60)

                                                 CATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTG                                                   >  SRR4302542.2208721/1‑94 (MQ=60)

                                                 CATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTG                                                   <  SRR4302542.3322838/94‑1 (MQ=60)

                                                  ATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGC                                                  >  SRR4302542.3946618/1‑94 (MQ=60)

                                                  ATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGC                                                  <  SRR4302542.1169463/94‑1 (MQ=60)

                                                  ATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGC                                                  >  SRR4302542.3461139/1‑94 (MQ=60)

                                                  ATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGC                                                  >  SRR4302542.4779470/1‑94 (MQ=60)

                                                   TTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCG                                                 <  SRR4302542.3424448/94‑1 (MQ=60)

                                                   TTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCG                                                 <  SRR4302542.454162/94‑1 (MQ=60)

                                                    TATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGT                                                <  SRR4302542.5828866/94‑1 (MQ=60)

                                                    TATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGT                                                <  SRR4302542.4408040/94‑1 (MQ=60)

                                                     ATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTA                                               >  SRR4302542.5495244/1‑94 (MQ=60)

                                                      TGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAA                                              >  SRR4302542.4265218/1‑94 (MQ=60)

                                                      TGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAA                                              >  SRR4302542.1812266/1‑94 (MQ=60)

                                                       GGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAA                                             >  SRR4302542.3554056/1‑94 (MQ=60)

                                                        GGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAAC                                            <  SRR4302542.816047/94‑1 (MQ=60)

                                                        GGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCATAAAC                                            <  SRR4302542.6567999/94‑1 (MQ=60)

                                                         GCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACT                                           <  SRR4302542.5687256/94‑1 (MQ=60)

                                                         GCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACT                                           >  SRR4302542.5738241/1‑94 (MQ=60)

                                                          CAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTC                                          >  SRR4302542.6576707/1‑94 (MQ=60)

                                                          CAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTC                                          >  SRR4302542.4461821/1‑94 (MQ=60)

                                                          CAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTC                                          <  SRR4302542.254280/94‑1 (MQ=60)

                                                          CAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTC                                          <  SRR4302542.1421127/94‑1 (MQ=60)

                                                           AGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTATTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCT                                         <  SRR4302542.2358534/94‑1 (MQ=60)

                                                           AGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCT                                         <  SRR4302542.1588782/94‑1 (MQ=60)

                                                            gtgcgCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTA                                        <  SRR4302542.7317/89‑1 (MQ=60)

                                                             tgcgCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTAT                                       <  SRR4302542.153850/90‑1 (MQ=60)

                                                             tgcgCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTAT                                       <  SRR4302542.3492296/90‑1 (MQ=60)

                                                              gcgCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATT                                      <  SRR4302542.3156709/91‑1 (MQ=60)

                                                               cgCACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTT                                     >  SRR4302542.6876902/3‑94 (MQ=60)

                                                               cgCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTT                                     >  SRR4302542.974100/3‑94 (MQ=60)

                                                                GCACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTA                                    >  SRR4302542.4281219/1‑94 (MQ=60)

                                                                GCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTA                                    <  SRR4302542.1598496/94‑1 (MQ=60)

                                                                 CACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAT                                   <  SRR4302542.4059947/94‑1 (MQ=60)

                                                                 CACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAT                                   >  SRR4302542.7338955/1‑94 (MQ=60)

                                                                 CACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAT                                   <  SRR4302542.3310286/94‑1 (MQ=60)

                                                                 CACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTAT                                   <  SRR4302542.245932/94‑1 (MQ=60)

                                                                  ACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATC                                  <  SRR4302542.4504607/94‑1 (MQ=60)

                                                                  ACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATC                                  >  SRR4302542.1060149/1‑94 (MQ=60)

                                                                  ACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATC                                  >  SRR4302542.4238026/1‑94 (MQ=60)

                                                                   CCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCG                                 >  SRR4302542.6199416/1‑94 (MQ=60)

                                                                   CCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCG                                 >  SRR4302542.409119/1‑94 (MQ=60)

                                                                    CAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGT                                >  SRR4302542.3153019/1‑94 (MQ=60)

                                                                    CAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGT                                >  SRR4302542.1472386/1‑94 (MQ=60)

                                                                    CAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGT                                >  SRR4302542.1274795/1‑94 (MQ=60)

                                                                    CAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGT                                <  SRR4302542.2635105/94‑1 (MQ=60)

                                                                     AGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTA                               <  SRR4302542.5295998/94‑1 (MQ=60)

                                                                      GCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAA                              <  SRR4302542.2925730/94‑1 (MQ=60)

                                                                       CGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAAT                             <  SRR4302542.1516776/94‑1 (MQ=60)

                                                                       CGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAAT                             <  SRR4302542.4995731/94‑1 (MQ=60)

                                                                       CGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAAT                             <  SRR4302542.1379832/94‑1 (MQ=60)

                                                                         TCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATaatgcagataat                           <  SRR4302542.4854544/94‑13 (MQ=60)

                                                                         TCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCG                           <  SRR4302542.7519977/94‑1 (MQ=60)

                                                                         TCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCG                           <  SRR4302542.4302045/94‑1 (MQ=60)

                                                                         TCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCG                           >  SRR4302542.4749627/1‑94 (MQ=60)

                                                                           TGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTT                         >  SRR4302542.1639963/1‑94 (MQ=60)

                                                                           TGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTT                         <  SRR4302542.4333665/94‑1 (MQ=60)

                                                                           TGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTT                         <  SRR4302542.6977195/94‑1 (MQ=60)

                                                                           TGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTT                         >  SRR4302542.5075941/1‑94 (MQ=60)

                                                                             AAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCT                       <  SRR4302542.1620381/94‑1 (MQ=60)

                                                                              AAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTT                      <  SRR4302542.1461089/94‑1 (MQ=60)

                                                                              AAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTT                      <  SRR4302542.3077487/94‑1 (MQ=60)

                                                                              AAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTT                      <  SRR4302542.4415190/94‑1 (MQ=60)

                                                                              AAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTT                      <  SRR4302542.7007236/94‑1 (MQ=60)

                                                                              AAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTT                      <  SRR4302542.724498/94‑1 (MQ=60)

                                                                               AGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTT                     >  SRR4302542.5956268/1‑94 (MQ=60)

                                                                               AGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTT                     >  SRR4302542.1425635/1‑94 (MQ=60)

                                                                               AGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTT                     >  SRR4302542.1592501/1‑94 (MQ=60)

                                                                               AGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTT                     <  SRR4302542.4739549/94‑1 (MQ=60)

                                                                               AGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTT                     <  SRR4302542.3782436/94‑1 (MQ=60)

                                                                               AGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTT                     <  SRR4302542.4489068/94‑1 (MQ=60)

                                                                                 ACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTAT                   >  SRR4302542.5367654/1‑94 (MQ=60)

                                                                                  CCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATT                  <  SRR4302542.296605/94‑1 (MQ=60)

                                                                                  CCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATT                  <  SRR4302542.1809889/94‑1 (MQ=60)

                                                                                  CCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATT                  <  SRR4302542.1337634/94‑1 (MQ=60)

                                                                                   CTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGCGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTT                 >  SRR4302542.1896179/1‑94 (MQ=60)

                                                                                   CTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTT                 >  SRR4302542.6671996/1‑94 (MQ=60)

                                                                                   CTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTT                 >  SRR4302542.6309651/1‑94 (MQ=60)

                                                                                   CTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTT                 <  SRR4302542.2997832/94‑1 (MQ=60)

                                                                                    TTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTG                <  SRR4302542.1919686/94‑1 (MQ=60)

                                                                                    TTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTG                <  SRR4302542.5425018/94‑1 (MQ=60)

                                                                                     TCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGG               >  SRR4302542.5826605/1‑94 (MQ=60)

                                                                                     TCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGG               >  SRR4302542.3249949/1‑94 (MQ=60)

                                                                                      CATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGT              >  SRR4302542.6971052/1‑94 (MQ=60)

                                                                                      CATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGT              >  SRR4302542.1236505/1‑94 (MQ=60)

                                                                                      CATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGT              >  SRR4302542.6041168/1‑94 (MQ=60)

                                                                                       ATCCCGGGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTC             <  SRR4302542.2304478/94‑1 (MQ=60)

                                                                                       ATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTC             >  SRR4302542.4528669/1‑94 (MQ=60)

                                                                                       ATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTC             <  SRR4302542.7153297/94‑1 (MQ=60)

                                                                                       ATCCCGAGCTGGAAGTGATTGGTACTAATACCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTC             >  SRR4302542.5894198/1‑94 (MQ=60)

                                                                                        TCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCA            >  SRR4302542.4362441/1‑94 (MQ=60)

                                                                                         CCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAG           >  SRR4302542.7140583/1‑94 (MQ=60)

                                                                                         CCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAG           >  SRR4302542.7078740/1‑94 (MQ=60)

                                                                                         CCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAG           <  SRR4302542.2486661/94‑1 (MQ=60)

                                                                                         CCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAG           <  SRR4302542.5578031/94‑1 (MQ=60)

                                                                                           CGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTT         >  SRR4302542.3544433/1‑94 (MQ=60)

                                                                                           CGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTT         <  SRR4302542.3563560/94‑1 (MQ=60)

                                                                                            GAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTGTTTATCGTAATCGTTCTTTATTTGGTCAGTTG        >  SRR4302542.4851713/1‑94 (MQ=60)

                                                                                              GCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTC      >  SRR4302542.4840757/1‑94 (MQ=60)

                                                                                              GCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTC      <  SRR4302542.6885216/94‑1 (MQ=60)

                                                                                              GCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTC      >  SRR4302542.641632/1‑94 (MQ=60)

                                                                                               ctgGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCA     >  SRR4302542.100002/4‑94 (MQ=60)

                                                                                               ctgGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCA     <  SRR4302542.5873158/91‑1 (MQ=60)

                                                                                               ctgGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCA     <  SRR4302542.6965425/91‑1 (MQ=60)

                                                                                               ctgGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCA     <  SRR4302542.6755938/91‑1 (MQ=60)

                                                                                                tgGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAA    >  SRR4302542.5705192/3‑94 (MQ=60)

                                                                                                G‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAAC   >  SRR4302542.3763530/1‑94 (MQ=60)

                                                                                                G‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAAC   >  SRR4302542.5112598/1‑94 (MQ=60)

                                                                                                G‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAAC   <  SRR4302542.6327841/94‑1 (MQ=60)

                                                                                                  GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAACC  <  SRR4302542.5651957/94‑1 (MQ=60)

                                                                                                  GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAACC  >  SRR4302542.5415324/1‑94 (MQ=60)

CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑‑G‑GG‑‑AAA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAATCGTTCTTTATTTGGTCAGTTGTCAACC  >  NC_000913/4008434‑4008618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`