Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,039,349 T→C P77P (CCA→CCG)  mobA ← MobA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,039,3490TC81.5% 618.2 / 149.4 303P77P (CCA→CCG) mobAMobA
Reads supporting (aligned to +/- strand):  ref base T (30/26);  new base C (137/110);  total (167/136)
Fisher's exact test for biased strand distribution p-value = 8.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01

Only 100 of 303 total aligned reads displayed.

AGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTGAGAGA  >  NC_000913/4039259‑4039440
                                                                                          |                                                                                           
aGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCgg                                                                                           <  1:61629/93‑1 (MQ=255)
 gggggAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCggg                                                                                          <  1:4456181/93‑1 (MQ=255)
  ggggAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGt                                                                                         <  1:6750956/93‑1 (MQ=255)
  ggggAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGt                                                                                         <  1:6452979/93‑1 (MQ=255)
  ggggAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGt                                                                                         >  2:3058580/1‑93 (MQ=255)
   gggAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTa                                                                                        >  1:2546233/1‑93 (MQ=255)
      aaTGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATc                                                                                     >  2:6771005/1‑93 (MQ=255)
       aTGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATcc                                                                                    >  1:4541403/1‑93 (MQ=255)
         gTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGc                                                                                  <  1:6665795/93‑1 (MQ=255)
         gTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGc                                                                                  >  2:2847170/1‑93 (MQ=255)
          tAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGcc                                                                                 >  1:1091494/1‑93 (MQ=255)
             ggCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGt                                                                              <  1:2791113/93‑1 (MQ=255)
               cGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGa                                                                            >  2:122640/1‑93 (MQ=255)
                gTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGaa                                                                           <  1:851216/93‑1 (MQ=255)
                gTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGaa                                                                           >  1:5960624/1‑93 (MQ=255)
                gTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGaa                                                                           >  2:4701705/1‑93 (MQ=255)
                gTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGaa                                                                           >  1:4279676/1‑93 (MQ=255)
                  aTCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATc                                                                         >  2:5060050/1‑93 (MQ=255)
                  aTCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATc                                                                         <  2:3692684/93‑1 (MQ=255)
                  aTCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATc                                                                         <  2:5876361/93‑1 (MQ=255)
                   tCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCt                                                                        <  2:4086060/93‑1 (MQ=255)
                   tCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCt                                                                        >  1:5215008/1‑93 (MQ=255)
                     gCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTc                                                                      >  1:5141523/1‑93 (MQ=255)
                        cGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAAt                                                                   >  1:3820527/1‑93 (MQ=255)
                         gggCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATc                                                                  >  1:2034935/1‑93 (MQ=255)
                          ggCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCa                                                                 <  1:2689739/93‑1 (MQ=255)
                           gCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCAc                                                                <  1:2321475/93‑1 (MQ=255)
                           gCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCAc                                                                <  1:3930490/93‑1 (MQ=255)
                             aaaacaaaaACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACtt                                                              >  2:7481058/1‑93 (MQ=255)
                              aaacaaaaACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACttt                                                             <  1:4886925/93‑1 (MQ=255)
                              aaacaaaaACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACttt                                                             <  1:6964660/93‑1 (MQ=255)
                              aaacaaaaACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACttt                                                             <  1:6704019/93‑1 (MQ=255)
                                acaaaaACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCa                                                           <  2:1103466/93‑1 (MQ=255)
                                acaaaaACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCa                                                           <  2:1939371/93‑1 (MQ=255)
                                   aaaaCCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGAc                                                        <  1:3141307/93‑1 (MQ=255)
                                   aaaaCCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGAc                                                        >  2:2617012/1‑93 (MQ=255)
                                    aaaCCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGAcc                                                       >  1:6547542/1‑93 (MQ=255)
                                      aCCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGc                                                     >  1:2625643/1‑93 (MQ=255)
                                      aCCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGc                                                     >  2:4910653/1‑93 (MQ=255)
                                       ccACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCt                                                    <  2:138460/93‑1 (MQ=255)
                                        cACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCtt                                                   >  2:3753904/1‑93 (MQ=255)
                                        cACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCtt                                                   >  2:5503696/1‑93 (MQ=255)
                                        cACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCtt                                                   <  2:7124607/93‑1 (MQ=255)
                                         aCTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTg                                                  <  1:958156/93‑1 (MQ=255)
                                          cTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGc                                                 >  1:143858/1‑93 (MQ=255)
                                          cTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGc                                                 <  1:5303832/93‑1 (MQ=255)
                                                aGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATa                                           <  1:5782349/93‑1 (MQ=255)
                                                aGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATa                                           <  2:6671910/93‑1 (MQ=255)
                                                 gCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAg                                          >  2:3861209/1‑93 (MQ=255)
                                                  cTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGa                                         >  1:3044824/1‑93 (MQ=255)
                                                    tCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGTGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGAtt                                       <  1:1168394/93‑1 (MQ=255)
                                                    tCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGAtt                                       >  2:2647573/1‑93 (MQ=255)
                                                      ctgctgCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTc                                     <  2:4223278/93‑1 (MQ=255)
                                                      ctgctgCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTc                                     >  1:6835567/1‑93 (MQ=255)
                                                         ctgcATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCtg                                  >  1:1608532/1‑93 (MQ=255)
                                                         ctgcATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCtg                                  >  2:6268468/1‑93 (MQ=255)
                                                          tgcATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCtga                                 <  2:6007857/93‑1 (MQ=255)
                                                          tgcATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCtga                                 >  2:7218303/1‑93 (MQ=255)
                                                              ttACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGAc                             >  2:1794384/1‑93 (MQ=255)
                                                              ttACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGAc                             >  1:180110/1‑93 (MQ=255)
                                                               tACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACg                            >  1:5465859/1‑93 (MQ=255)
                                                                aCTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGa                           <  2:2456498/93‑1 (MQ=255)
                                                                aCTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGa                           <  2:7393639/93‑1 (MQ=255)
                                                                 cTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGAt                          >  2:2310588/1‑93 (MQ=255)
                                                                  tGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGAtt                         >  2:3644729/1‑93 (MQ=255)
                                                                   gAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTa                        >  2:2091230/1‑93 (MQ=255)
                                                                   gAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTa                        >  1:4063124/1‑93 (MQ=255)
                                                                   gAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTa                        >  1:703716/1‑93 (MQ=255)
                                                                    aaaGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAg                       >  1:7498213/1‑93 (MQ=255)
                                                                    aaaGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAg                       >  2:5416703/1‑93 (MQ=255)
                                                                     aaGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGc                      >  1:1260238/1‑93 (MQ=255)
                                                                      aGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCa                     <  1:4635242/93‑1 (MQ=255)
                                                                       gCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCAt                    <  2:2336232/93‑1 (MQ=255)
                                                                        cATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCAtt                   >  1:2468456/1‑93 (MQ=255)
                                                                        cATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCAtt                   <  2:7335754/93‑1 (MQ=255)
                                                                         aTTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTa                  >  2:1655783/1‑93 (MQ=255)
                                                                          ttCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTaa                 >  1:5191117/1‑93 (MQ=255)
                                                                          ttCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTaa                 >  2:4137230/1‑93 (MQ=255)
                                                                           tCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAAc                <  1:2902783/93‑1 (MQ=255)
                                                                             cTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCa              >  2:1515965/1‑93 (MQ=255)
                                                                             cTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCa              <  1:3754367/93‑1 (MQ=255)
                                                                             cTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCa              >  1:3494091/1‑93 (MQ=255)
                                                                              tGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCac             >  1:4718807/1‑93 (MQ=255)
                                                                              tGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCac             >  2:865842/1‑93 (MQ=255)
                                                                                ccAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCacga           <  2:1468805/93‑1 (MQ=255)
                                                                                ccAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCacga           <  2:3959126/93‑1 (MQ=255)
                                                                                 cAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCacgac          <  2:4849734/93‑1 (MQ=255)
                                                                                 cAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCacgac          <  1:5727192/93‑1 (MQ=255)
                                                                                 cAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCacgac          >  2:1711895/1‑93 (MQ=255)
                                                                                  agagGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCacgacg         >  2:6813781/1‑93 (MQ=255)
                                                                                  agagGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCacgacg         >  1:5628399/1‑93 (MQ=255)
                                                                                   gagGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGt        <  2:4263278/93‑1 (MQ=255)
                                                                                   gagGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGt        >  2:5280481/1‑93 (MQ=255)
                                                                                   gagGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGt        >  1:2171972/1‑93 (MQ=255)
                                                                                    agGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTg       <  1:7310904/93‑1 (MQ=255)
                                                                                    agGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTg       >  2:643835/1‑93 (MQ=255)
                                                                                     gggCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTga      <  2:3371405/93‑1 (MQ=255)
                                                                                     gggCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTga      >  2:3273666/1‑93 (MQ=255)
                                                                                      ggCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTgag     >  1:3579590/1‑93 (MQ=255)
                                                                                      ggCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTgag     <  2:2687972/93‑1 (MQ=255)
                                                                                          |                                                                                           
AGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTGAGAGA  >  NC_000913/4039259‑4039440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATCAGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTGAGAGAGC  >  NC_000913/4039256‑4039442
                                                                                             |                                                                                             
ATCAGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCTTTCCTGCCAGAGGGCCC                                                                                               <  SRR4302542.7560252/94‑1 (MQ=60)
ATCAGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCT                                                                                               <  SRR4302542.1923550/94‑1 (MQ=60)
ATCAGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCT                                                                                               <  SRR4302542.3302027/94‑1 (MQ=60)
ATCAGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCC                                                                                               <  SRR4302542.1816443/94‑1 (MQ=60)
 TCAGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCG                                                                                              <  SRR4302542.3224548/94‑1 (MQ=60)
  CAGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTCCTGAAAGCATTCCTGCCAGAGGGCCCGG                                                                                             <  SRR4302542.3562256/94‑1 (MQ=60)
  CAGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGG                                                                                             <  SRR4302542.7571230/94‑1 (MQ=60)
  CAGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGG                                                                                             >  SRR4302542.5258575/1‑94 (MQ=60)
   AGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGG                                                                                            <  SRR4302542.62128/94‑1 (MQ=60)
   AGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGG                                                                                            <  SRR4302542.918818/94‑1 (MQ=60)
   AGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGG                                                                                            <  SRR4302542.580622/94‑1 (MQ=60)
    GGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGT                                                                                           <  SRR4302542.4499890/94‑1 (MQ=60)
    GGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGT                                                                                           >  SRR4302542.5223611/1‑94 (MQ=60)
     GGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTA                                                                                          <  SRR4302542.6516520/94‑1 (MQ=60)
     GGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTA                                                                                          <  SRR4302542.6817372/94‑1 (MQ=60)
     GGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTA                                                                                          >  SRR4302542.2570911/1‑94 (MQ=60)
      GGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAA                                                                                         >  SRR4302542.5870838/1‑94 (MQ=60)
      GGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAA                                                                                         <  SRR4302542.5735667/94‑1 (MQ=60)
      GGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAA                                                                                         >  SRR4302542.2711136/1‑94 (MQ=60)
         AATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCC                                                                                      >  SRR4302542.4585862/1‑94 (MQ=60)
          ATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCG                                                                                     >  SRR4302542.2889813/1‑94 (MQ=60)
           TGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGC                                                                                    >  SRR4302542.954725/1‑94 (MQ=60)
            GTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCC                                                                                   >  SRR4302542.6379597/1‑94 (MQ=60)
            GTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCC                                                                                   >  SRR4302542.1100847/1‑94 (MQ=60)
            GTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCC                                                                                   <  SRR4302542.6731468/94‑1 (MQ=60)
              AAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAG                                                                                 <  SRR4302542.5351564/94‑1 (MQ=60)
              AAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAG                                                                                 >  SRR4302542.6908967/1‑94 (MQ=60)
               AGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGT                                                                                <  SRR4302542.4877120/94‑1 (MQ=60)
               AGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGT                                                                                >  SRR4302542.4562565/1‑94 (MQ=60)
               AGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGT                                                                                <  SRR4302542.1185453/94‑1 (MQ=60)
                GGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTG                                                                               <  SRR4302542.2817979/94‑1 (MQ=60)
                  CGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAA                                                                             >  SRR4302542.4321773/1‑94 (MQ=60)
                  CGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAA                                                                             >  SRR4302542.6018340/1‑94 (MQ=60)
                   GTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAAT                                                                            <  SRR4302542.858556/94‑1 (MQ=60)
                   GTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAAT                                                                            <  SRR4302542.4495166/94‑1 (MQ=60)
                    TATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATC                                                                           >  SRR4302542.3213229/1‑94 (MQ=60)
                     ATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCT                                                                          >  SRR4302542.5265721/1‑94 (MQ=60)
                     ATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCT                                                                          >  SRR4302542.3806894/1‑94 (MQ=60)
                       CGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTC                                                                        >  SRR4302542.5191503/1‑94 (MQ=60)
                       CGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTC                                                                        >  SRR4302542.805674/1‑94 (MQ=60)
                       CGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTC                                                                        <  SRR4302542.3916443/94‑1 (MQ=60)
                        GCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCA                                                                       >  SRR4302542.6769257/1‑94 (MQ=60)
                          ACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAAT                                                                     >  SRR4302542.5705748/1‑94 (MQ=60)
                          ACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAAT                                                                     <  SRR4302542.7054729/94‑1 (MQ=60)
                          ACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAAT                                                                     >  SRR4302542.3858318/1‑94 (MQ=60)
                          ACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAAT                                                                     <  SRR4302542.1980014/94‑1 (MQ=60)
                           CGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATC                                                                    >  SRR4302542.2052529/1‑94 (MQ=60)
                            GGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCA                                                                   >  SRR4302542.4567485/1‑94 (MQ=60)
                            GGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCA                                                                   >  SRR4302542.5529723/1‑94 (MQ=60)
                             GGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCAC                                                                  <  SRR4302542.2715676/94‑1 (MQ=60)
                              GCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACT                                                                 <  SRR4302542.2341376/94‑1 (MQ=60)
                              GCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACT                                                                 <  SRR4302542.3969274/94‑1 (MQ=60)
                               CAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTT                                                                >  SRR4302542.5211855/1‑94 (MQ=60)
                               CAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTT                                                                <  SRR4302542.4812751/94‑1 (MQ=60)
                               CAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTT                                                                <  SRR4302542.3489875/94‑1 (MQ=60)
                                AAACCAAAACCCCCTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTT                                                               <  SRR4302542.2373060/94‑1 (MQ=60)
                                AAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTT                                                               >  SRR4302542.3773838/1‑94 (MQ=60)
                                AAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTT                                                               >  SRR4302542.5318380/1‑94 (MQ=60)
                                AAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTT                                                               <  SRR4302542.6935798/94‑1 (MQ=60)
                                AAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTT                                                               >  SRR4302542.2600273/1‑94 (MQ=60)
                                 AAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTC                                                              <  SRR4302542.6547153/94‑1 (MQ=60)
                                 AAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTC                                                              <  SRR4302542.6770068/94‑1 (MQ=60)
                                 AAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTC                                                              <  SRR4302542.4934466/94‑1 (MQ=60)
                                 AAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTC                                                              <  SRR4302542.7033086/94‑1 (MQ=60)
                                   ACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAG                                                            <  SRR4302542.5866934/94‑1 (MQ=60)
                                   ACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAG                                                            >  SRR4302542.414128/1‑94 (MQ=60)
                                   ACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAG                                                            <  SRR4302542.2703697/94‑1 (MQ=60)
                                    CAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGA                                                           <  SRR4302542.1685311/94‑1 (MQ=60)
                                    CAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGA                                                           <  SRR4302542.6884974/94‑1 (MQ=60)
                                     AAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGAC                                                          >  SRR4302542.2787921/1‑94 (MQ=60)
                                      AAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACC                                                         <  SRR4302542.5618279/94‑1 (MQ=60)
                                      AAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACC                                                         <  SRR4302542.3171161/94‑1 (MQ=60)
                                      AAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACC                                                         >  SRR4302542.6612104/1‑94 (MQ=60)
                                        AACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGC                                                       >  SRR4302542.2598540/1‑94 (MQ=60)
                                        AACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGC                                                       >  SRR4302542.2651010/1‑94 (MQ=60)
                                          CCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTT                                                     <  SRR4302542.4586670/94‑1 (MQ=60)
                                          CCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTT                                                     >  SRR4302542.605317/1‑94 (MQ=60)
                                            ACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGC                                                   <  SRR4302542.966384/94‑1 (MQ=60)
                                            ACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGC                                                   >  SRR4302542.145058/1‑94 (MQ=60)
                                            ACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGC                                                   >  SRR4302542.3845432/1‑94 (MQ=60)
                                             CTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCC                                                  <  SRR4302542.5355358/94‑1 (MQ=60)
                                             CTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCC                                                  >  SRR4302542.4056062/1‑94 (MQ=60)
                                              TCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCT                                                 <  SRR4302542.7417170/94‑1 (MQ=60)
                                               CACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTG                                                >  SRR4302542.3081645/1‑94 (MQ=60)
                                                  CAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATA                                             >  SRR4302542.7163874/1‑94 (MQ=60)
                                                   AGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAG                                            >  SRR4302542.2032713/1‑94 (MQ=60)
                                                   AGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAG                                            <  SRR4302542.5838495/94‑1 (MQ=60)
                                                   AGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAG                                            >  SRR4302542.1150414/1‑94 (MQ=60)
                                                   AGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAG                                            <  SRR4302542.2073727/94‑1 (MQ=60)
                                                    GCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGA                                           <  SRR4302542.2728460/94‑1 (MQ=60)
                                                    GCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGA                                           >  SRR4302542.3073895/1‑94 (MQ=60)
                                                    GCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGA                                           >  SRR4302542.5074564/1‑94 (MQ=60)
                                                     CTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGAT                                          <  SRR4302542.1727775/94‑1 (MQ=60)
                                                       TCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGTGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTT                                        <  SRR4302542.1178480/94‑1 (MQ=60)
                                                       TCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTT                                        <  SRR4302542.2364984/94‑1 (MQ=60)
                                                        CCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTC                                       >  SRR4302542.6728045/1‑94 (MQ=60)
                                                        CCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTC                                       >  SRR4302542.6902736/1‑94 (MQ=60)
                                                         CTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCC                                      >  SRR4302542.2533377/1‑94 (MQ=60)
                                                         CTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCC                                      >  SRR4302542.7089316/1‑94 (MQ=60)
                                                         CTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCC                                      >  SRR4302542.3066045/1‑94 (MQ=60)
                                                          TGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCT                                     >  SRR4302542.5490282/1‑94 (MQ=60)
                                                          TGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCT                                     >  SRR4302542.4702580/1‑94 (MQ=60)
                                                           GCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTG                                    >  SRR4302542.1622424/1‑94 (MQ=60)
                                                              GCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATG                                 <  SRR4302542.7436226/94‑1 (MQ=60)
                                                              GCATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATG                                 >  SRR4302542.1378460/1‑94 (MQ=60)
                                                               CATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGA                                >  SRR4302542.3711382/1‑94 (MQ=60)
                                                                ATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGCTGAC                               >  SRR4302542.2245262/1‑94 (MQ=60)
                                                                ATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGAC                               <  SRR4302542.4696526/94‑1 (MQ=60)
                                                                ATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGAC                               >  SRR4302542.6434005/1‑94 (MQ=60)
                                                                ATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGAC                               >  SRR4302542.3146082/1‑94 (MQ=60)
                                                                ATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGAC                               >  SRR4302542.181638/1‑94 (MQ=60)
                                                                ATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGAC                               <  SRR4302542.2874538/94‑1 (MQ=60)
                                                                ATTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGAC                               >  SRR4302542.2093973/1‑94 (MQ=60)
                                                                 TTACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACG                              >  SRR4302542.5518953/1‑94 (MQ=60)
                                                                  TACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGA                             >  SRR4302542.2225569/1‑94 (MQ=60)
                                                                  TACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGA                             >  SRR4302542.5414085/1‑94 (MQ=60)
                                                                   ACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGAT                            <  SRR4302542.4675892/94‑1 (MQ=60)
                                                                   ACTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGAT                            <  SRR4302542.6151423/94‑1 (MQ=60)
                                                                    CTGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATT                           >  SRR4302542.7225018/1‑94 (MQ=60)
                                                                     TGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTA                          >  SRR4302542.3595175/1‑94 (MQ=60)
                                                                     TGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTA                          >  SRR4302542.4103191/1‑94 (MQ=60)
                                                                     TGAAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTA                          >  SRR4302542.709805/1‑94 (MQ=60)
                                                                      GAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAG                         >  SRR4302542.7571916/1‑94 (MQ=60)
                                                                       AAAGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGC                        >  SRR4302542.1271075/1‑94 (MQ=60)
                                                                        AAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCA                       <  SRR4302542.5258842/94‑1 (MQ=60)
                                                                         AGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCAT                      <  SRR4302542.4680534/94‑1 (MQ=60)
                                                                         AGCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCAT                      <  SRR4302542.156516/94‑1 (MQ=60)
                                                                          GCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATT                     >  SRR4302542.2492418/1‑94 (MQ=60)
                                                                          GCATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATT                     >  SRR4302542.5553138/1‑94 (MQ=60)
                                                                           CATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTA                    <  SRR4302542.4444830/94‑1 (MQ=60)
                                                                            ATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAA                   >  SRR4302542.5821569/1‑94 (MQ=60)
                                                                            ATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAA                   >  SRR4302542.6790251/1‑94 (MQ=60)
                                                                            ATTCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAA                   >  SRR4302542.5241549/1‑94 (MQ=60)
                                                                              TCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACC                 >  SRR4302542.6518145/1‑94 (MQ=60)
                                                                              TCCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACC                 <  SRR4302542.2930643/94‑1 (MQ=60)
                                                                               CCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGATGATTAGCATTAACCA                <  SRR4302542.6833153/94‑1 (MQ=60)
                                                                               CCTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCA                >  SRR4302542.3526770/1‑94 (MQ=60)
                                                                                CTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCAC               >  SRR4302542.6777272/1‑94 (MQ=60)
                                                                                CTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCAC               <  SRR4302542.3791512/94‑1 (MQ=60)
                                                                                CTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCAC               >  SRR4302542.4764807/1‑94 (MQ=60)
                                                                                CTGCCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCAC               <  SRR4302542.4081497/94‑1 (MQ=60)
                                                                                  GCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGA             <  SRR4302542.6612205/94‑1 (MQ=60)
                                                                                   CCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGAC            >  SRR4302542.2540510/1‑94 (MQ=60)
                                                                                   CCAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGAC            >  SRR4302542.5029049/1‑94 (MQ=60)
                                                                                    CAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACG           >  SRR4302542.4283236/1‑94 (MQ=60)
                                                                                    CAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACG           >  SRR4302542.5683048/1‑94 (MQ=60)
                                                                                    CAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACG           >  SRR4302542.3577045/1‑94 (MQ=60)
                                                                                    CAGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACG           <  SRR4302542.5782773/94‑1 (MQ=60)
                                                                                     AGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGT          >  SRR4302542.6754908/1‑94 (MQ=60)
                                                                                     AGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGT          >  SRR4302542.1149049/1‑94 (MQ=60)
                                                                                     AGAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGT          >  SRR4302542.2190670/1‑94 (MQ=60)
                                                                                      GAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTG         <  SRR4302542.78963/94‑1 (MQ=60)
                                                                                      GAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTG         <  SRR4302542.3868565/94‑1 (MQ=60)
                                                                                      GAGGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTG         <  SRR4302542.2954833/94‑1 (MQ=60)
                                                                                       AGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTGA        <  SRR4302542.7382515/94‑1 (MQ=60)
                                                                                        GGGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTGAG       >  SRR4302542.3612992/1‑94 (MQ=60)
                                                                                         GGCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGCGAGA      >  SRR4302542.1191777/1‑94 (MQ=60)
                                                                                          GCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTGAGAG     <  SRR4302542.1421647/94‑1 (MQ=60)
                                                                                          GCCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTGAGAG     <  SRR4302542.1496314/94‑1 (MQ=60)
                                                                                           CCCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTGAGAGA    <  SRR4302542.1758498/94‑1 (MQ=60)
                                                                                            CCGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTGAGAGAG   >  SRR4302542.7344816/1‑94 (MQ=60)
                                                                                             CGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTGAGAGAGC  <  SRR4302542.2529892/94‑1 (MQ=60)
                                                                                             |                                                                                             
ATCAGGGGGAATGTAAGGCGTATCGCACGGGCAAAACAAAAACCACTCACCAGCTTCCTGCTGCATTACTGAAAGCATTCCTGCCAGAGGGCCTGGGTAATCCGCCAGTGAATCTTCAATCACTTTCAGACCGCTTGCCTGATAGATTTCCTGATGACGATTAGCATTAACCACGACGTGAGAGAGC  >  NC_000913/4039256‑4039442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑