Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,102,870	C→T	D128N (GAC→AAC)	cpxR ←	transcriptional regulator in 2‑component system

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,102,870	0	C	T	86.9%	848.8 / 75.1	289	D128N (GAC→AAC)	cpxR	transcriptional regulator in 2‑component system
Reads supporting (aligned to +/- strand): ref base C (21/17); new base T (133/118); total (154/135)
Fisher's exact test for biased strand distribution p-value = 8.62e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01

Only 100 of 323 total aligned reads displayed.

GGTTAACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGA  >  NC_000913/4102778‑4102959

  ttAACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACcgttgttgt                                                                                         >  1:7085645/1‑93 (MQ=255)

    aaCTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACcgctgttgttg                                                                                       <  2:4855522/93‑1 (MQ=255)

     aCTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACcgttgttgttgt                                                                                      <  2:4166061/93‑1 (MQ=255)

     aCTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACcgttgtcgttgt                                                                                      >  1:39949/1‑93 (MQ=255)

      cTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCgttgttgttgtt                                                                                     >  1:6193037/1‑93 (MQ=255)

       tCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGttt                                                                                    <  1:601918/93‑1 (MQ=255)

        ccAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGtttt                                                                                   >  1:1036246/1‑93 (MQ=255)

          aGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGc                                                                                 >  1:6130193/1‑93 (MQ=255)

          aGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGc                                                                                 >  2:3054345/1‑93 (MQ=255)

           gCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCt                                                                                >  1:5090056/1‑93 (MQ=255)

             gTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGt                                                                              >  1:6397700/1‑93 (MQ=255)

             gTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGt                                                                              >  2:6092880/1‑93 (MQ=255)

             gTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGt                                                                              <  2:3471800/93‑1 (MQ=255)

               ttGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTg                                                                            <  1:1000819/93‑1 (MQ=255)

                tGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTgc                                                                           <  2:3990790/93‑1 (MQ=255)

                 gCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTgct                                                                          <  1:6861884/93‑1 (MQ=255)

                 gCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTgct                                                                          >  1:75265/1‑93 (MQ=255)

                     gTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTgctcgct                                                                      >  1:1581956/1‑93 (MQ=255)

                      tCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTgctcgctc                                                                     >  2:7104094/1‑93 (MQ=255)

                       cGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTcc                                                                    <  1:74106/93‑1 (MQ=255)

                       cGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTcc                                                                    <  1:4819155/93‑1 (MQ=255)

                        gAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCa                                                                   >  1:3825465/1‑93 (MQ=255)

                        gAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCa                                                                   <  2:24011/93‑1 (MQ=255)

                        gAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCa                                                                   <  1:4541869/93‑1 (MQ=255)

                          aGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGt                                                                 >  2:7402456/1‑93 (MQ=255)

                           gCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTg                                                                <  2:5979944/93‑1 (MQ=255)

                             tGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCg                                                              >  1:1758749/1‑93 (MQ=255)

                              ggCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGa                                                             <  2:442658/93‑1 (MQ=255)

                               gCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGaa                                                            >  1:140281/1‑93 (MQ=255)

                               gCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGaa                                                            <  2:3361501/93‑1 (MQ=255)

                                 ttCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACg                                                          >  2:4731210/1‑93 (MQ=255)

                                 ttCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACg                                                          >  1:580340/1‑93 (MQ=255)

                                  tCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACgg                                                         <  1:1946068/93‑1 (MQ=255)

                                  tCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACgg                                                         <  1:4714060/93‑1 (MQ=255)

                                   ccTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGgc                                                        <  1:5518876/93‑1 (MQ=255)

                                     tGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGTTCGCTCCAGTGTGAACGgcgc                                                      <  2:4519859/93‑1 (MQ=255)

                                       aCGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAg                                                    >  2:365180/1‑93 (MQ=255)

                                       aCGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAg                                                    >  1:6262879/1‑93 (MQ=255)

                                       aCGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAg                                                    <  2:7478636/93‑1 (MQ=255)

                                        cGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAgg                                                   <  2:2755524/93‑1 (MQ=255)

                                         ggCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGa                                                  >  1:3777262/1‑93 (MQ=255)

                                         ggCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGa                                                  >  2:5582051/1‑93 (MQ=255)

                                          gCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGAt                                                 <  2:199431/93‑1 (MQ=255)

                                           ccTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATc                                                <  1:3142447/93‑1 (MQ=255)

                                            cTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATcg                                               >  2:1067617/1‑93 (MQ=255)

                                            cTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATcg                                               <  2:3723980/93‑1 (MQ=255)

                                            cTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATcg                                               <  2:821813/93‑1 (MQ=255)

                                            cTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATcg                                               <  1:299847/93‑1 (MQ=255)

                                            cTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATcg                                               >  1:2102252/1‑93 (MQ=255)

                                             tGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATcgc                                              >  1:5970550/1‑93 (MQ=255)

                                             tGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATcgc                                              <  2:1379861/93‑1 (MQ=255)

                                              ggATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATcgcg                                             >  1:5379802/1‑93 (MQ=255)

                                               gATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATcgcgc                                            <  2:6202969/93‑1 (MQ=255)

                                                  tCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGaa                                         <  1:3439253/93‑1 (MQ=255)

                                                    aGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATa                                       >  2:5669876/1‑93 (MQ=255)

                                                    aGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATa                                       <  1:1354976/93‑1 (MQ=255)

                                                    aGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATa                                       >  1:2901795/1‑93 (MQ=255)

                                                    aGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATa                                       <  2:1188029/93‑1 (MQ=255)

                                                     gCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATAc                                      <  1:4289177/93‑1 (MQ=255)

                                                      cACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACg                                     <  2:5174274/93‑1 (MQ=255)

                                                       aCTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGt                                    <  1:4434763/93‑1 (MQ=255)

                                                        cTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTg                                   <  2:3825440/93‑1 (MQ=255)

                                                         tAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGc                                  >  1:6715423/1‑93 (MQ=255)

                                                          aaGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGcc                                 <  2:6823048/93‑1 (MQ=255)

                                                             gCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGccacc                              <  2:2186662/93‑1 (MQ=255)

                                                              cATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGccacca                             <  1:5236699/93‑1 (MQ=255)

                                                              cATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGccacca                             >  2:6309203/1‑93 (MQ=255)

                                                               aTCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAg                            >  2:2464579/1‑93 (MQ=255)

                                                               aTCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAg                            >  1:409408/1‑93 (MQ=255)

                                                               aTCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAg                            >  1:2750943/1‑93 (MQ=255)

                                                                 cAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCt                          <  2:2921834/93‑1 (MQ=255)

                                                                 cAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCt                          >  2:1663942/1‑93 (MQ=255)

                                                                  aaCTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTc                         >  1:2738729/1‑93 (MQ=255)

                                                                  aaCTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTc                         <  2:6941481/93‑1 (MQ=255)

                                                                   aCTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCa                        >  2:4909399/1‑93 (MQ=255)

                                                                   aCTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCa                        >  2:3889773/1‑93 (MQ=255)

                                                                    cTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCAc                       <  1:7392346/93‑1 (MQ=255)

                                                                      tCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGa                     >  2:5880225/1‑93 (MQ=255)

                                                                      tCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGa                     <  2:5409031/93‑1 (MQ=255)

                                                                       ccAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGAt                    >  1:2454513/1‑93 (MQ=255)

                                                                        cAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATc                   >  1:3843101/1‑93 (MQ=255)

                                                                         aGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCa                  >  1:1025168/1‑93 (MQ=255)

                                                                         aGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCa                  <  1:4975717/93‑1 (MQ=255)

                                                                         aGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCa                  <  1:905489/93‑1 (MQ=255)

                                                                         aGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCa                  <  2:6403347/93‑1 (MQ=255)

                                                                          gtgtCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCAt                 <  1:1490730/93‑1 (MQ=255)

                                                                           tgtCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCAtt                <  1:3351646/93‑1 (MQ=255)

                                                                           tgtCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCAtt                >  2:6654761/1‑93 (MQ=255)

                                                                             tCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTaa              >  2:7164211/1‑93 (MQ=255)

                                                                               ggTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAAc            >  2:3145917/1‑93 (MQ=255)

                                                                               ggTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAAc            <  1:2623488/93‑1 (MQ=255)

                                                                                gTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACg           <  1:6622269/93‑1 (MQ=255)

                                                                                gTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACg           <  1:3668359/93‑1 (MQ=255)

                                                                                    aCCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGttt       >  1:6908030/1‑93 (MQ=255)

                                                                                    aCCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGttt       <  2:2995475/93‑1 (MQ=255)

                                                                                    aCCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGttt       >  2:5439120/1‑93 (MQ=255)

                                                                                     ccGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTc      >  2:1842310/1‑93 (MQ=255)

                                                                                      cgttgttgttgtTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCg     <  2:5641314/93‑1 (MQ=255)

                                                                                       gttgttgttgttTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCgg    >  1:1520616/1‑93 (MQ=255)

                                                                                         tgttgttgtTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGga  >  2:7326183/1‑93 (MQ=255)

GGTTAACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGA  >  NC_000913/4102778‑4102959

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GGTTAACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATA  >  NC_000913/4102778‑4102963

GGTTAACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTG                                                                                              >  SRR4302542.5023172/1‑94 (MQ=60)

GGTTAACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTG                                                                                              >  SRR4302542.6584830/1‑94 (MQ=60)

 GTTAACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGT                                                                                             <  SRR4302542.6928189/94‑1 (MQ=60)

 GTTAACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGT                                                                                             >  SRR4302542.7155170/1‑94 (MQ=60)

 GTTAACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGT                                                                                             <  SRR4302542.2715237/94‑1 (MQ=60)

 GTTAACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGT                                                                                             >  SRR4302542.6951475/1‑94 (MQ=60)

  TTAACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTT                                                                                            <  SRR4302542.5676765/94‑1 (MQ=60)

  TTAACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTT                                                                                            <  SRR4302542.2145905/94‑1 (MQ=60)

    AACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGT                                                                                          >  SRR4302542.40305/1‑94 (MQ=60)

     ACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTT                                                                                         >  SRR4302542.6253329/1‑94 (MQ=60)

     ACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTT                                                                                         >  SRR4302542.46710/1‑94 (MQ=60)

      CTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTT                                                                                        >  SRR4302542.3843681/1‑94 (MQ=60)

      CTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTT                                                                                        <  SRR4302542.5734896/94‑1 (MQ=60)

       TCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTT                                                                                       >  SRR4302542.6693196/1‑94 (MQ=60)

       TCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTT                                                                                       <  SRR4302542.607106/94‑1 (MQ=60)

       TCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTT                                                                                       <  SRR4302542.2101670/94‑1 (MQ=60)

       TCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTT                                                                                       <  SRR4302542.1506021/94‑1 (MQ=60)

       TCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTT                                                                                       >  SRR4302542.5458444/1‑94 (MQ=60)

       TCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTT                                                                                       >  SRR4302542.2992668/1‑94 (MQ=60)

       TCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTT                                                                                       >  SRR4302542.1045153/1‑94 (MQ=60)

        CCAGCGTTTGCCCGTCGAAGCTGGCTTCCAGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTG                                                                                      <  SRR4302542.6757924/94‑1 (MQ=60)

         CAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGC                                                                                     >  SRR4302542.1335495/1‑94 (MQ=60)

         CAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGC                                                                                     >  SRR4302542.6189498/1‑94 (MQ=60)

         CAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTAAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGC                                                                                     >  SRR4302542.4031761/1‑94 (MQ=60)

          AGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCT                                                                                    >  SRR4302542.5139527/1‑94 (MQ=60)

          AGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCT                                                                                    >  SRR4302542.4995138/1‑94 (MQ=60)

          AGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCT                                                                                    >  SRR4302542.963325/1‑94 (MQ=60)

            CGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGT                                                                                  >  SRR4302542.6460734/1‑94 (MQ=60)

            CGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGT                                                                                  >  SRR4302542.6147910/1‑94 (MQ=60)

             GTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTT                                                                                 <  SRR4302542.6354040/94‑1 (MQ=60)

             GTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTT                                                                                 >  SRR4302542.4558244/1‑94 (MQ=60)

             GTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTT                                                                                 >  SRR4302542.1517143/1‑94 (MQ=60)

             GTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTT                                                                                 >  SRR4302542.3192671/1‑94 (MQ=60)

             GTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTT                                                                                 >  SRR4302542.4706410/1‑94 (MQ=60)

              TTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTG                                                                                <  SRR4302542.7468477/94‑1 (MQ=60)

               TTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGC                                                                               <  SRR4302542.1009430/94‑1 (MQ=60)

                TGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCT                                                                              >  SRR4302542.75889/1‑94 (MQ=60)

                TGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCT                                                                              <  SRR4302542.5556259/94‑1 (MQ=60)

                TGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCT                                                                              >  SRR4302542.2577175/1‑94 (MQ=60)

                 GCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTC                                                                             <  SRR4302542.6929302/94‑1 (MQ=60)

                  CCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCG                                                                            >  SRR4302542.5961755/1‑94 (MQ=60)

                   CCTTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGC                                                                           >  SRR4302542.552693/1‑94 (MQ=60)

                   CCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGgtccc                                                                           >  SRR4302542.2678102/1‑89 (MQ=60)

                   CCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGC                                                                           >  SRR4302542.1707955/1‑94 (MQ=60)

                    CGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCT                                                                          >  SRR4302542.1595613/1‑94 (MQ=60)

                    CGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCT                                                                          >  SRR4302542.1468649/1‑94 (MQ=60)

                    CGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCT                                                                          <  SRR4302542.2778710/94‑1 (MQ=60)

                     GTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTC                                                                         >  SRR4302542.7130231/1‑94 (MQ=60)

                       CGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCA                                                                       <  SRR4302542.4866121/94‑1 (MQ=60)

                       CGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCA                                                                       <  SRR4302542.74717/94‑1 (MQ=60)

                       CGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCA                                                                       >  SRR4302542.3863315/1‑94 (MQ=60)

                        GAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAG                                                                      <  SRR4302542.1943929/94‑1 (MQ=60)

                        GAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAG                                                                      <  SRR4302542.4586333/94‑1 (MQ=60)

                        GAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAG                                                                      <  SRR4302542.1989287/94‑1 (MQ=60)

                        GAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAG                                                                      <  SRR4302542.6077233/94‑1 (MQ=60)

                         AAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGT                                                                     <  SRR4302542.7361986/94‑1 (MQ=60)

                         AAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGT                                                                     >  SRR4302542.2769978/1‑94 (MQ=60)

                          AGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTG                                                                    <  SRR4302542.6299991/94‑1 (MQ=60)

                          AGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTG                                                                    <  SRR4302542.6202902/94‑1 (MQ=60)

                           GCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGC                                                                   <  SRR4302542.4765901/94‑1 (MQ=60)

                           GCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGC                                                                   <  SRR4302542.2692192/94‑1 (MQ=60)

                            CTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCG                                                                  >  SRR4302542.1774011/1‑94 (MQ=60)

                             TGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGA                                                                 >  SRR4302542.3904095/1‑94 (MQ=60)

                              GGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAA                                                                >  SRR4302542.141449/1‑94 (MQ=60)

                              GGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAA                                                                >  SRR4302542.6643478/1‑94 (MQ=60)

                               GCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAAC                                                               <  SRR4302542.5363353/94‑1 (MQ=60)

                                CTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACG                                                              >  SRR4302542.585360/1‑94 (MQ=60)

                                  TCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTTCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGTTCGCTCCAGTGCAAACGCC                                                            >  SRR4302542.1145337/1‑94 (MQ=60)

                                  TCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGC                                                            <  SRR4302542.4760022/94‑1 (MQ=60)

                                  TCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGC                                                            <  SRR4302542.1962899/94‑1 (MQ=60)

                                   CCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCG                                                           <  SRR4302542.4253107/94‑1 (MQ=60)

                                   CCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCG                                                           <  SRR4302542.5572510/94‑1 (MQ=60)

                                    CTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGC                                                          >  SRR4302542.3077426/1‑94 (MQ=60)

                                    CTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGC                                                          >  SRR4302542.3077427/1‑94 (MQ=60)

                                      GACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAG                                                        >  SRR4302542.6324592/1‑94 (MQ=60)

                                        CGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGA                                                      >  SRR4302542.3814634/1‑94 (MQ=60)

                                        CGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGA                                                      <  SRR4302542.6057945/94‑1 (MQ=60)

                                         GGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGAT                                                     >  SRR4302542.4395796/1‑94 (MQ=60)

                                         GGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGAT                                                     <  SRR4302542.433741/94‑1 (MQ=60)

                                         GGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGAT                                                     >  SRR4302542.7071388/1‑94 (MQ=60)

                                          GCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATC                                                    <  SRR4302542.1021860/94‑1 (MQ=60)

                                          GCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATC                                                    <  SRR4302542.3360878/94‑1 (MQ=60)

                                           CCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCG                                                   >  SRR4302542.6902775/1‑94 (MQ=60)

                                           CCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCG                                                   >  SRR4302542.6844483/1‑94 (MQ=60)

                                           CCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCG                                                   <  SRR4302542.3172308/94‑1 (MQ=60)

                                           CCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCG                                                   >  SRR4302542.2120398/1‑94 (MQ=60)

                                           CCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCG                                                   >  SRR4302542.1384508/1‑94 (MQ=60)

                                           CCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCG                                                   <  SRR4302542.80439/94‑1 (MQ=60)

                                            CTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGC                                                  <  SRR4302542.302459/94‑1 (MQ=60)

                                            CTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGC                                                  >  SRR4302542.6028338/1‑94 (MQ=60)

                                            CTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGC                                                  >  SRR4302542.625668/1‑94 (MQ=60)

                                            CTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGC                                                  >  SRR4302542.7403015/1‑94 (MQ=60)

                                            CTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGC                                                  >  SRR4302542.1429891/1‑94 (MQ=60)

                                             TGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCG                                                 >  SRR4302542.5432064/1‑94 (MQ=60)

                                             TGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCG                                                 >  SRR4302542.1613372/1‑94 (MQ=60)

                                              GGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGC                                                >  SRR4302542.7574281/1‑94 (MQ=60)

                                              GGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGC                                                <  SRR4302542.3455427/94‑1 (MQ=60)

                                               GATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCG                                               >  SRR4302542.1884091/1‑94 (MQ=60)

                                                ATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGA                                              >  SRR4302542.2773227/1‑94 (MQ=60)

                                                ATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGA                                              >  SRR4302542.1851489/1‑94 (MQ=60)

                                                  TCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAAT                                            <  SRR4302542.3471451/94‑1 (MQ=60)

                                                  TCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAAT                                            <  SRR4302542.3868777/94‑1 (MQ=60)

                                                   CAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATA                                           >  SRR4302542.2929649/1‑94 (MQ=60)

                                                    AGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATAC                                          >  SRR4302542.5323407/1‑94 (MQ=60)

                                                    AGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATAC                                          <  SRR4302542.1366678/94‑1 (MQ=60)

                                                     GCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACG                                         <  SRR4302542.4331359/94‑1 (MQ=60)

                                                     GCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACG                                         <  SRR4302542.856163/94‑1 (MQ=60)

                                                     GCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACG                                         <  SRR4302542.3825721/94‑1 (MQ=60)

                                                      CACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGT                                        <  SRR4302542.3614424/94‑1 (MQ=60)

                                                       ACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTG                                       <  SRR4302542.4478295/94‑1 (MQ=60)

                                                        CTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGC                                      <  SRR4302542.3795032/94‑1 (MQ=60)

                                                        CTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGC                                      >  SRR4302542.6781566/1‑94 (MQ=60)

                                                        CTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGC                                      >  SRR4302542.4814835/1‑94 (MQ=60)

                                                        CTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGC                                      >  SRR4302542.2803794/1‑94 (MQ=60)

                                                         TAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCC                                     >  SRR4302542.3238872/1‑94 (MQ=60)

                                                         TAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCC                                     >  SRR4302542.4034688/1‑94 (MQ=60)

                                                          AAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCA                                    >  SRR4302542.6239189/1‑94 (MQ=60)

                                                          AAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCA                                    >  SRR4302542.5990111/1‑94 (MQ=60)

                                                           AGGCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCAC                                   >  SRR4302542.505224/1‑94 (MQ=60)

                                                             GCATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCA                                 <  SRR4302542.2980338/94‑1 (MQ=60)

                                                              CATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAG                                >  SRR4302542.412940/1‑94 (MQ=60)

                                                              CATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAG                                >  SRR4302542.2777462/1‑94 (MQ=60)

                                                              CATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAG                                <  SRR4302542.5287613/94‑1 (MQ=60)

                                                              CATCAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAG                                <  SRR4302542.6702767/94‑1 (MQ=60)

                                                               ATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGC                               >  SRR4302542.5223734/1‑94 (MQ=60)

                                                                 CAACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTC                             >  SRR4302542.2765141/1‑94 (MQ=60)

                                                                 CAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTC                             >  SRR4302542.5187078/1‑94 (MQ=60)

                                                                  AACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCA                            >  SRR4302542.3874955/1‑94 (MQ=60)

                                                                  AACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCA                            >  SRR4302542.3823161/1‑94 (MQ=60)

                                                                   ACTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCAC                           <  SRR4302542.2618247/94‑1 (MQ=60)

                                                                   ACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCAC                           >  SRR4302542.7597056/1‑94 (MQ=60)

                                                                    CTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACG                          <  SRR4302542.4057285/94‑1 (MQ=60)

                                                                    CTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACG                          >  SRR4302542.1041989/1‑94 (MQ=60)

                                                                    CTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACG                          <  SRR4302542.7464701/94‑1 (MQ=60)

                                                                    CTTCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACG                          <  SRR4302542.1547933/94‑1 (MQ=60)

                                                                      TCCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGAT                        <  SRR4302542.1450569/94‑1 (MQ=60)

                                                                      TCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGAT                        >  SRR4302542.2478379/1‑94 (MQ=60)

                                                                       CCAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATC                       >  SRR4302542.3881088/1‑94 (MQ=60)

                                                                        CAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCA                      >  SRR4302542.1034003/1‑94 (MQ=60)

                                                                        CAGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCGCACGATCA                      >  SRR4302542.1034004/1‑94 (MQ=60)

                                                                         AGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCAT                     <  SRR4302542.277295/94‑1 (MQ=60)

                                                                         AGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCAT                     <  SRR4302542.5024022/94‑1 (MQ=60)

                                                                         AGTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCAT                     <  SRR4302542.913311/94‑1 (MQ=60)

                                                                          GTGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATT                    <  SRR4302542.1503621/94‑1 (MQ=60)

                                                                           TGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTA                   >  SRR4302542.6449661/1‑94 (MQ=60)

                                                                           TGTCGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTA                   <  SRR4302542.3383176/94‑1 (MQ=60)

                                                                             TCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAA                 <  SRR4302542.236163/94‑1 (MQ=60)

                                                                              CGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAAC                <  SRR4302542.6535340/94‑1 (MQ=60)

                                                                              CGGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAAC                >  SRR4302542.375212/1‑94 (MQ=60)

                                                                               GGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACG               <  SRR4302542.4431423/94‑1 (MQ=60)

                                                                               GGTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACG               >  SRR4302542.3446182/1‑94 (MQ=60)

                                                                               GGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACG               <  SRR4302542.2648836/94‑1 (MQ=60)

                                                                                GTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGG              <  SRR4302542.5063400/94‑1 (MQ=60)

                                                                                GTGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGG              <  SRR4302542.6687561/94‑1 (MQ=60)

                                                                                GTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGG              >  SRR4302542.6247678/1‑94 (MQ=60)

                                                                                GTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGG              <  SRR4302542.3703449/94‑1 (MQ=60)

                                                                                 TGAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGT             >  SRR4302542.74660/1‑94 (MQ=60)

                                                                                  GAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTT            >  SRR4302542.6944010/1‑94 (MQ=60)

                                                                                  GAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTT            <  SRR4302542.6162994/94‑1 (MQ=60)

                                                                                  GAACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTT            <  SRR4302542.3585602/94‑1 (MQ=60)

                                                                                   AACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTT           >  SRR4302542.1572919/1‑94 (MQ=60)

                                                                                   AACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTT           >  SRR4302542.6975848/1‑94 (MQ=60)

                                                                                   AACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTT           <  SRR4302542.4511359/94‑1 (MQ=60)

                                                                                    ACCGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTC          >  SRR4302542.1414396/1‑94 (MQ=60)

                                                                                      CGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGG        >  SRR4302542.1533747/1‑94 (MQ=60)

                                                                                      CGTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGG        <  SRR4302542.1032268/94‑1 (MQ=60)

                                                                                      CGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGG        >  SRR4302542.4878190/1‑94 (MQ=60)

                                                                                       GTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGG       >  SRR4302542.7461048/1‑94 (MQ=60)

                                                                                       GTTGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGG       <  SRR4302542.4155990/94‑1 (MQ=60)

                                                                                       GTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGG       <  SRR4302542.4937583/94‑1 (MQ=60)

                                                                                         TGTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAG     >  SRR4302542.2954450/1‑94 (MQ=60)

                                                                                          GTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGG    >  SRR4302542.7008043/1‑94 (MQ=60)

                                                                                          GTTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGA    >  SRR4302542.3931669/1‑94 (MQ=60)

                                                                                           TTGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGAT   >  SRR4302542.2581609/1‑94 (MQ=60)

                                                                                            CGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATA  >  SRR4302542.2943279/1‑94 (MQ=60)

GGTTAACTCCAGCGTTTGCCCGTCGAAGCTGGCTTCCTGACGGCCTGGATTCAGCACTAAGGCATCAACTTCCAGTGTCGGTGAACCGTTGTCGTTGTTTTGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATA  >  NC_000913/4102778‑4102963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`