Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,158,827 |
G→T |
G61V (GGC→GTC) |
yijC → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,158,827 | 0 | G | T | 100.0%
| 1210.4
/ NA
| 323 | G61V (GGC→GTC) | yijC | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (132/191); total (132/191) |
Only 100 of 323 total aligned reads displayed.
GCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGC > NC_000913/4158737‑4158915
|
gccgTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCa < 2:7151814/93‑1 (MQ=255)
gccgTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCa < 1:213274/93‑1 (MQ=255)
ccgTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCAt < 1:612725/93‑1 (MQ=255)
ccgTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCAt < 1:4998130/93‑1 (MQ=255)
cgTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCAtt < 1:5967437/93‑1 (MQ=255)
ttCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGc < 1:3160818/93‑1 (MQ=255)
cGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTc < 2:1731716/93‑1 (MQ=255)
tggtggAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCa > 2:831838/1‑93 (MQ=255)
tggtggAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCa < 1:5876359/93‑1 (MQ=255)
ggtggAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCAc < 2:3918575/93‑1 (MQ=255)
ggtggAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCAc > 1:3544020/1‑93 (MQ=255)
ggtggAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCAc > 1:3870183/1‑93 (MQ=255)
tggAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACct > 2:6650146/1‑93 (MQ=255)
gAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACctct < 2:3630783/93‑1 (MQ=255)
aaGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCtt > 2:6595393/1‑93 (MQ=255)
aGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCttt > 2:4069353/1‑93 (MQ=255)
ccGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCttttt > 2:4461658/1‑93 (MQ=255)
ccGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCttttt > 2:4649250/1‑93 (MQ=255)
cGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTa > 2:5035540/1‑93 (MQ=255)
aTTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCg > 1:3696422/1‑93 (MQ=255)
aTTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCg < 1:7121326/93‑1 (MQ=255)
aTTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCg > 1:7220717/1‑93 (MQ=255)
tttAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCgg < 2:2752684/93‑1 (MQ=255)
tAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCa < 2:1211318/93‑1 (MQ=255)
tAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCa < 1:6076112/93‑1 (MQ=255)
aGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCAt < 1:6670189/93‑1 (MQ=255)
aGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCAt < 1:5480719/93‑1 (MQ=255)
gCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCAtt > 2:698102/1‑93 (MQ=255)
gCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCAtt > 2:4517892/1‑93 (MQ=255)
gcAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCAttt < 2:7216379/92‑1 (MQ=255)
ccAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCAttt < 1:2431103/93‑1 (MQ=255)
ttAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCcgc < 2:4965825/93‑1 (MQ=255)
tAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCcgcg > 2:1357783/1‑93 (MQ=255)
tGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGt > 2:1986137/1‑93 (MQ=255)
gCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCACGACGTa < 2:5216897/93‑1 (MQ=255)
tGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGa < 2:2322953/93‑1 (MQ=255)
tGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGa > 1:4721763/1‑93 (MQ=255)
gAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGAc < 2:2106320/93‑1 (MQ=255)
gAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGAc < 2:6117232/93‑1 (MQ=255)
aaCGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACg > 2:5361417/1‑93 (MQ=255)
aCGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGa > 2:7497377/1‑93 (MQ=255)
aCGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGa > 2:2592328/1‑93 (MQ=255)
cGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGaa < 1:4228243/93‑1 (MQ=255)
gCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAAc > 2:4746703/1‑93 (MQ=255)
gCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAAc > 2:7426978/1‑93 (MQ=255)
gCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAAc < 1:981219/93‑1 (MQ=255)
gCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAAc < 1:4154265/93‑1 (MQ=255)
cAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTCTCGGCATTTCCGCGACGTAGACGAACt < 2:6421058/93‑1 (MQ=255)
aGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTg < 1:5691811/93‑1 (MQ=255)
aGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTg < 1:2946836/93‑1 (MQ=255)
aGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTg < 1:7474726/93‑1 (MQ=255)
gCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTgg < 1:3656858/93‑1 (MQ=255)
gCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTgg > 2:5860717/1‑93 (MQ=255)
gCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTgg > 2:2230341/1‑93 (MQ=255)
cTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTggg < 1:1552154/93‑1 (MQ=255)
ttCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGt < 1:4438958/93‑1 (MQ=255)
gCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTg > 2:3409916/1‑93 (MQ=255)
ccAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGa > 1:6375880/1‑93 (MQ=255)
ccAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGa < 1:3477037/93‑1 (MQ=255)
aGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGAcc < 1:1025068/93‑1 (MQ=255)
gCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCa < 2:5528969/93‑1 (MQ=255)
gCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCa < 1:6869679/93‑1 (MQ=255)
cTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATg > 1:2761758/1‑93 (MQ=255)
cTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATg < 2:3564286/93‑1 (MQ=255)
cTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATg < 2:6274925/93‑1 (MQ=255)
tGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATgg > 1:4504805/1‑93 (MQ=255)
tGAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATgg > 2:4225260/1‑93 (MQ=255)
gAGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGt < 2:6338129/93‑1 (MQ=255)
aGTTTGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGtt > 1:485130/1‑93 (MQ=255)
tttGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTtga < 1:869193/93‑1 (MQ=255)
tttGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTtga > 1:2608085/1‑93 (MQ=255)
tttGCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTtga > 1:3256165/1‑93 (MQ=255)
gCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTtgatga < 2:511783/93‑1 (MQ=255)
gCGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTtgatga < 1:1711224/93‑1 (MQ=255)
cGTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATgag < 2:885064/93‑1 (MQ=255)
gTGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATgaga < 1:1432136/93‑1 (MQ=255)
tGAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGagag < 2:2430321/93‑1 (MQ=255)
gAAGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGc > 2:5682085/1‑93 (MQ=255)
aaGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCg < 2:6504489/93‑1 (MQ=255)
aaGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCg < 2:6704413/93‑1 (MQ=255)
aaGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCg < 2:1641653/93‑1 (MQ=255)
aaGTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCg > 1:2048535/1‑93 (MQ=255)
gTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGt < 1:6204351/93‑1 (MQ=255)
gTGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGt < 1:6517148/93‑1 (MQ=255)
tGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCTTGGTTGATGAGAGCGGtt < 1:4588027/93‑1 (MQ=255)
tGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGtt < 2:3682241/93‑1 (MQ=255)
tGGCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGtt > 2:6977503/1‑93 (MQ=255)
ggCGCGTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGttt < 2:1493996/93‑1 (MQ=255)
cgcgTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTaa < 2:6848442/93‑1 (MQ=255)
cgcgTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTaa < 1:5213004/93‑1 (MQ=255)
cgcgTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTaa < 2:4124548/93‑1 (MQ=255)
gcgTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAAt < 2:3532970/93‑1 (MQ=255)
cgTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATg > 1:7062942/1‑93 (MQ=255)
gTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGc < 2:2953469/93‑1 (MQ=255)
gTGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGc < 1:1261652/93‑1 (MQ=255)
tGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCt > 2:1555197/1‑93 (MQ=255)
tGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCt < 2:1869868/93‑1 (MQ=255)
tGAAGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCt < 2:6244231/93‑1 (MQ=255)
aGCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACg > 1:480477/1‑93 (MQ=255)
gCGGTCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGc < 1:3285370/93‑1 (MQ=255)
|
GCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGC > NC_000913/4158737‑4158915
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑GCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACT > NC_000913/4158735‑4158920
|
CCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TC > SRR4302542.7049634/1‑94 (MQ=60)
CGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCA > SRR4302542.1740635/1‑94 (MQ=60)
GCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCAT < SRR4302542.215107/94‑1 (MQ=60)
GCCGTCCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCGGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCAT < SRR4302542.4606963/94‑1 (MQ=60)
CCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATT < SRR4302542.4351613/94‑1 (MQ=60)
CCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATT < SRR4302542.6081487/94‑1 (MQ=60)
CCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATT < SRR4302542.617996/94‑1 (MQ=60)
CCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATT > SRR4302542.53852/1‑94 (MQ=60)
CCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATT < SRR4302542.5046683/94‑1 (MQ=60)
CCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATT > SRR4302542.796877/1‑94 (MQ=60)
CGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTG > SRR4302542.716333/1‑94 (MQ=60)
CGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTG < SRR4302542.1662022/94‑1 (MQ=60)
CGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTG < SRR4302542.6025205/94‑1 (MQ=60)
CGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTG > SRR4302542.4501721/1‑94 (MQ=60)
GTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGC > SRR4302542.6104902/1‑94 (MQ=60)
TTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCT < SRR4302542.3190820/94‑1 (MQ=60)
TTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCT < SRR4302542.5600809/94‑1 (MQ=60)
TTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCT < SRR4302542.2062063/94‑1 (MQ=60)
TCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTC < SRR4302542.2651706/94‑1 (MQ=60)
CGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCC > SRR4302542.6002648/1‑94 (MQ=60)
CGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCC > SRR4302542.3732113/1‑94 (MQ=60)
GCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTTGAAGCGG‑TCATTGCTCC > SRR4302542.6239740/1‑94 (MQ=60)
TGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCAC > SRR4302542.3908419/1‑94 (MQ=60)
TGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCAC < SRR4302542.5933325/94‑1 (MQ=60)
TGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCAC > SRR4302542.3577126/1‑94 (MQ=60)
GGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACC > SRR4302542.2878016/1‑94 (MQ=60)
GTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGGTTCATTGCTCCCACC > SRR4302542.3739114/1‑94 (MQ=60)
TGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑GCcatggttccccctt > SRR4302542.2368499/1‑80 (MQ=60)
GGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGTTCCCACCTCT > SRR4302542.6698250/1‑94 (MQ=60)
GGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCT < SRR4302542.4854886/94‑1 (MQ=60)
GGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCT > SRR4302542.6999463/1‑94 (MQ=60)
GCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTT > SRR4302542.3343219/1‑94 (MQ=60)
GCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTT < SRR4302542.2597193/94‑1 (MQ=60)
GCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATC < SRR4302542.960216/94‑1 (MQ=60)
GCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATC > SRR4302542.5744972/1‑94 (MQ=60)
GCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATC > SRR4302542.6794227/1‑94 (MQ=60)
GCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATC > SRR4302542.2144939/1‑94 (MQ=60)
CATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCG > SRR4302542.7291549/1‑94 (MQ=60)
CATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCG > SRR4302542.3732997/1‑94 (MQ=60)
ATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGG < SRR4302542.7191223/94‑1 (MQ=60)
TTTAGCCAATTAAGTGCTGAACGAAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGC < SRR4302542.2929121/94‑1 (MQ=60)
TAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCAT < SRR4302542.6134956/94‑1 (MQ=60)
AGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATT < SRR4302542.975300/94‑1 (MQ=60)
AGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATT < SRR4302542.4531187/94‑1 (MQ=60)
AGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATT < SRR4302542.5533953/94‑1 (MQ=60)
AGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATT < SRR4302542.6735905/94‑1 (MQ=60)
GCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTT < SRR4302542.1548992/94‑1 (MQ=60)
CCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTC < SRR4302542.2454736/94‑1 (MQ=60)
CAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCC < SRR4302542.5132038/94‑1 (MQ=60)
CAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCC > SRR4302542.6446609/1‑94 (MQ=60)
AATTAAGTGCTGACCGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCCCCTCTTTTTATCGGCATTTCCG < SRR4302542.1037194/94‑1 (MQ=60)
AATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCG > SRR4302542.4939730/1‑94 (MQ=60)
TTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCG < SRR4302542.7246096/94‑1 (MQ=60)
AAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGAC < SRR4302542.5032560/94‑1 (MQ=60)
AAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGAC < SRR4302542.4181621/94‑1 (MQ=60)
AGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACG > SRR4302542.3402741/1‑94 (MQ=60)
AGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACG > SRR4302542.3309201/1‑94 (MQ=60)
GTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGT < SRR4302542.5806816/94‑1 (MQ=60)
GTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGT > SRR4302542.138798/1‑94 (MQ=60)
GCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAG < SRR4302542.4592022/94‑1 (MQ=60)
GCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAG < SRR4302542.6839061/94‑1 (MQ=60)
GCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAG < SRR4302542.4147498/94‑1 (MQ=60)
CTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGA > SRR4302542.4767786/1‑94 (MQ=60)
TGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGAC < SRR4302542.7146243/94‑1 (MQ=60)
TGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGAC < SRR4302542.1950037/94‑1 (MQ=60)
TGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGAC < SRR4302542.6207714/94‑1 (MQ=60)
TGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGAC < SRR4302542.4236137/94‑1 (MQ=60)
GAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACG < SRR4302542.422736/94‑1 (MQ=60)
AACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGA > SRR4302542.6424437/1‑94 (MQ=60)
CGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAAC < SRR4302542.3774533/94‑1 (MQ=60)
CGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAAC < SRR4302542.4269895/94‑1 (MQ=60)
GCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACT < SRR4302542.989667/94‑1 (MQ=60)
GCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACT < SRR4302542.3191048/94‑1 (MQ=60)
GCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACT < SRR4302542.4195160/94‑1 (MQ=60)
CAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTG < SRR4302542.3297259/94‑1 (MQ=60)
CAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTG > SRR4302542.6406843/1‑94 (MQ=60)
AGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGG < SRR4302542.7547974/94‑1 (MQ=60)
AGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGG < SRR4302542.5747083/94‑1 (MQ=60)
AGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGG < SRR4302542.5876728/94‑1 (MQ=60)
AGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGG < SRR4302542.471250/94‑1 (MQ=60)
AGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGG < SRR4302542.2975049/94‑1 (MQ=60)
GCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGG < SRR4302542.1580314/94‑1 (MQ=60)
GCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGG < SRR4302542.3691177/94‑1 (MQ=60)
GCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGG < SRR4302542.3633589/94‑1 (MQ=60)
CTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGT < SRR4302542.1565546/94‑1 (MQ=60)
CTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGT > SRR4302542.623392/1‑94 (MQ=60)
TTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTC < SRR4302542.4482523/94‑1 (MQ=60)
TTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTC < SRR4302542.470834/94‑1 (MQ=60)
CGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTG < SRR4302542.7198645/94‑1 (MQ=60)
CGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTG > SRR4302542.4437281/1‑94 (MQ=60)
GCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGA > SRR4302542.6438661/1‑94 (MQ=60)
CCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGAC < SRR4302542.3509583/94‑1 (MQ=60)
CCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGAC < SRR4302542.2075363/94‑1 (MQ=60)
CAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACC < SRR4302542.6185577/94‑1 (MQ=60)
CAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACC > SRR4302542.7394506/1‑94 (MQ=60)
AGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCA < SRR4302542.1033900/94‑1 (MQ=60)
GCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCAT < SRR4302542.6937160/94‑1 (MQ=60)
GCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCAT < SRR4302542.3700043/94‑1 (MQ=60)
CCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATG > SRR4302542.2788369/1‑94 (MQ=60)
CTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGG > SRR4302542.3561819/1‑94 (MQ=60)
CTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGG > SRR4302542.4548969/1‑94 (MQ=60)
CTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTACCGCGACGTAGACGAACTGGGTCTGACCATGG > SRR4302542.4878557/1‑94 (MQ=60)
TGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGT < SRR4302542.5500978/94‑1 (MQ=60)
TGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGT < SRR4302542.215412/94‑1 (MQ=60)
TGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGT < SRR4302542.761795/94‑1 (MQ=60)
GAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTT > SRR4302542.489335/1‑94 (MQ=60)
GAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTT < SRR4302542.3100818/94‑1 (MQ=60)
GTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGA > SRR4302542.3286925/1‑94 (MQ=60)
GTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGA > SRR4302542.2633304/1‑94 (MQ=60)
TTTGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGAT < SRR4302542.876686/94‑1 (MQ=60)
TGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGA > SRR4302542.4818387/1‑94 (MQ=60)
TGCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGA > SRR4302542.3830431/1‑94 (MQ=60)
GCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAG > SRR4302542.3593819/1‑94 (MQ=60)
GCGTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAG < SRR4302542.1726091/94‑1 (MQ=60)
GTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAG < SRR4302542.1444513/94‑1 (MQ=60)
GTGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAG < SRR4302542.6975752/94‑1 (MQ=60)
TGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGC > SRR4302542.6183604/1‑94 (MQ=60)
TGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGC < SRR4302542.321407/94‑1 (MQ=60)
TGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGC < SRR4302542.5758550/94‑1 (MQ=60)
TGAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGC < SRR4302542.6661613/94‑1 (MQ=60)
GAAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCG > SRR4302542.2066243/1‑94 (MQ=60)
AAGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGG < SRR4302542.5118241/94‑1 (MQ=60)
AGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGT > SRR4302542.7570518/1‑94 (MQ=60)
AGTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGT > SRR4302542.2613923/1‑94 (MQ=60)
GTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTT < SRR4302542.3436479/94‑1 (MQ=60)
GTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTT < SRR4302542.1334181/94‑1 (MQ=60)
GTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTT < SRR4302542.6581374/94‑1 (MQ=60)
GTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTT < SRR4302542.6265235/94‑1 (MQ=60)
GTGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTT < SRR4302542.4910565/94‑1 (MQ=60)
TGGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCTTGGTTGATGAGAGCGGTTT < SRR4302542.4632901/94‑1 (MQ=60)
NNGCGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTT < SRR4302542.1535902/94‑1 (MQ=60)
CGCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAAT < SRR4302542.5263697/94‑1 (MQ=60)
GCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATG < SRR4302542.6525830/94‑1 (MQ=60)
GCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATG > SRR4302542.6944007/1‑94 (MQ=60)
GCG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATG > SRR4302542.7132262/1‑94 (MQ=60)
CG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGC > SRR4302542.4842946/1‑94 (MQ=60)
CG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGC > SRR4302542.3544816/1‑94 (MQ=60)
CG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGC < SRR4302542.7352568/94‑1 (MQ=60)
CG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGC > SRR4302542.3180962/1‑94 (MQ=60)
CG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGC > SRR4302542.2704806/1‑94 (MQ=60)
CG‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGC > SRR4302542.2197354/1‑94 (MQ=60)
G‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCT < SRR4302542.1260289/94‑1 (MQ=60)
G‑TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCT < SRR4302542.1272501/94‑1 (MQ=60)
TGAAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTA > SRR4302542.4484027/1‑94 (MQ=60)
AAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACG < SRR4302542.2669396/94‑1 (MQ=60)
AAGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACG > SRR4302542.484641/1‑94 (MQ=60)
AGCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGC > SRR4302542.5990946/1‑94 (MQ=60)
GCGG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCC < SRR4302542.3316394/94‑1 (MQ=60)
GG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAA > SRR4302542.1910701/1‑94 (MQ=60)
GG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAA > SRR4302542.4696436/1‑94 (MQ=60)
GG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAA > SRR4302542.2617074/1‑94 (MQ=60)
GG‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAA > SRR4302542.444143/1‑94 (MQ=60)
G‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAAC > SRR4302542.5028648/1‑94 (MQ=60)
G‑TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAAC < SRR4302542.2598196/94‑1 (MQ=60)
TCATTGCTCCCCCCTCTTTTTATCGGCATTTCCGCGACGTAGGCGGACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACT < SRR4302542.6745345/94‑1 (MQ=60)
TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACT < SRR4302542.370305/94‑1 (MQ=60)
TCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACT < SRR4302542.2621773/94‑1 (MQ=60)
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CCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCG‑TGAAGCGG‑GCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACT > NC_000913/4158735‑4158920
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
