Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,185,997 A→G T1024A (ACC→GCC)  rpoC → RNA polymerase beta prime subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,185,9970AG89.3% 755.5 / 71.8 299T1024A (ACC→GCC) rpoCRNA polymerase beta prime subunit
Reads supporting (aligned to +/- strand):  ref base A (12/20);  new base G (134/132);  total (147/152)
Fisher's exact test for biased strand distribution p-value = 1.93e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.68e-01

Only 100 of 302 total aligned reads displayed.

AGCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGAC  >  NC_000913/4185907‑4186088
                                                                                          |                                                                                           
  cTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCAt                                                                                         <  1:5496914/93‑1 (MQ=255)
   tACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATg                                                                                        <  2:3894303/93‑1 (MQ=255)
    aCAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGc                                                                                       <  2:4545140/93‑1 (MQ=255)
     cAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGcc                                                                                      <  2:3796144/93‑1 (MQ=255)
     cAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGcc                                                                                      >  2:1220/1‑93 (MQ=255)
     cAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGcc                                                                                      >  1:962027/1‑93 (MQ=255)
      aaaGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCg                                                                                     >  2:5424080/1‑93 (MQ=255)
      aaaGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCg                                                                                     >  1:5022664/1‑93 (MQ=255)
      aaaGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCg                                                                                     >  1:5346282/1‑93 (MQ=255)
       aaGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCgg                                                                                    >  2:6700148/1‑93 (MQ=255)
       aaGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCgg                                                                                    >  1:4092896/1‑93 (MQ=255)
        aGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGt                                                                                   <  2:3604734/93‑1 (MQ=255)
        aGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGt                                                                                   <  2:250101/93‑1 (MQ=255)
         gTACCTTACGGTGCGTTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGtt                                                                                  >  2:6546838/1‑93 (MQ=255)
           aCCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTAt                                                                                >  1:1826847/1‑93 (MQ=255)
           aCCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTAt                                                                                >  1:4563241/1‑93 (MQ=255)
             cTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCa                                                                              >  2:5729467/1‑93 (MQ=255)
                 cGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACCGGGACCCGCACGCCATGCCGGTTATCACCGa                                                                          <  2:4669930/93‑1 (MQ=255)
                   gTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAg                                                                        <  2:4296265/93‑1 (MQ=255)
                   gTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAg                                                                        >  1:4121741/1‑93 (MQ=255)
                     gCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTa                                                                      >  2:6408114/1‑93 (MQ=255)
                      cGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTaa                                                                     <  1:4194103/93‑1 (MQ=255)
                      cGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTaa                                                                     <  1:5786727/93‑1 (MQ=255)
                       ggTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAg                                                                    <  1:829409/93‑1 (MQ=255)
                        gTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGc                                                                   <  2:3346565/93‑1 (MQ=255)
                         tACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCg                                                                  >  2:304366/1‑93 (MQ=255)
                         tACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCg                                                                  >  1:6992598/1‑93 (MQ=255)
                         tACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCg                                                                  >  1:715296/1‑93 (MQ=255)
                          aCTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCgg                                                                 <  1:352153/93‑1 (MQ=255)
                           cTGGCGAAAGGCGATGGCGGACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCggg                                                                >  1:7324674/1‑92 (MQ=255)
                           cTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGt                                                                >  1:4875601/1‑93 (MQ=255)
                            tGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGtt                                                               >  2:1688820/1‑93 (MQ=255)
                            tGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGtt                                                               <  1:3328722/93‑1 (MQ=255)
                             ggCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGttt                                                              >  2:3100263/1‑93 (MQ=255)
                             ggCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGttt                                                              <  1:3625852/93‑1 (MQ=255)
                             ggCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGttt                                                              <  2:4584391/93‑1 (MQ=255)
                              gCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGtttt                                                             <  1:3144524/93‑1 (MQ=255)
                               cGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTg                                                            <  1:7482831/93‑1 (MQ=255)
                                gAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGt                                                           <  1:1436951/93‑1 (MQ=255)
                                 aaaGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTa                                                          <  2:4850671/93‑1 (MQ=255)
                                 aaaGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTa                                                          <  1:7378035/93‑1 (MQ=255)
                                 aaaGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTa                                                          >  1:5243096/1‑93 (MQ=255)
                                  aaGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTAc                                                         >  1:2044670/1‑93 (MQ=255)
                                  aaGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTAc                                                         <  2:5268687/93‑1 (MQ=255)
                                   aGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACg                                                        >  2:6010627/1‑93 (MQ=255)
                                   aGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACg                                                        >  1:611451/1‑93 (MQ=255)
                                    ggCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGc                                                       >  1:2711697/1‑93 (MQ=255)
                                     gCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCt                                                      >  1:1017444/1‑93 (MQ=255)
                                       gATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCttt                                                    >  1:1973882/1‑93 (MQ=255)
                                        aTGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTa                                                   <  2:1226096/93‑1 (MQ=255)
                                        aTGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTa                                                   <  2:2902604/93‑1 (MQ=255)
                                         tGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTAc                                                  <  1:2336078/93‑1 (MQ=255)
                                          tgCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACt                                                 <  2:2720360/92‑1 (MQ=255)
                                          ggCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACt                                                 <  1:6254015/93‑1 (MQ=255)
                                          ggCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACt                                                 >  2:3462885/1‑93 (MQ=255)
                                          ggCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACt                                                 <  2:3145696/93‑1 (MQ=255)
                                           gCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTg                                                <  1:2445349/93‑1 (MQ=255)
                                             gAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGAc                                              >  1:4674072/1‑93 (MQ=255)
                                              aaCAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACa                                             >  2:7196121/1‑93 (MQ=255)
                                              aaCAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACa                                             >  1:3059019/1‑93 (MQ=255)
                                              aaCAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACa                                             >  1:6532323/1‑93 (MQ=255)
                                               aCAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACAt                                            <  1:1616086/93‑1 (MQ=255)
                                               aCAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACAt                                            <  1:3721416/93‑1 (MQ=255)
                                                cAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATg                                           <  2:1568926/93‑1 (MQ=255)
                                                  ggTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGAt                                         <  2:5204011/93‑1 (MQ=255)
                                                  ggTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGAt                                         <  1:6799699/93‑1 (MQ=255)
                                                  ggTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGAt                                         <  1:805098/93‑1 (MQ=255)
                                                   gTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATc                                        >  2:1067425/1‑93 (MQ=255)
                                                    ttGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCg                                       <  2:6998148/93‑1 (MQ=255)
                                                      gCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGAc                                     <  2:2079782/93‑1 (MQ=255)
                                                       cTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACg                                    <  1:3376625/93‑1 (MQ=255)
                                                        tGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACgg                                   <  1:6459251/93‑1 (MQ=255)
                                                        tGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACgg                                   <  1:2598227/93‑1 (MQ=255)
                                                          gcggcgAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGcc                                 <  1:5586117/93‑1 (MQ=255)
                                                          gcggcgAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGcc                                 <  1:693460/93‑1 (MQ=255)
                                                           cggcgAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCa                                >  1:120668/1‑93 (MQ=255)
                                                           cggcgAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCa                                <  1:21716/93‑1 (MQ=255)
                                                            ggcgAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAg                               <  1:443821/93‑1 (MQ=255)
                                                            ggcgAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAg                               <  2:6122512/93‑1 (MQ=255)
                                                            ggcgAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGGTATCACCGAAGTAAGCGGGTTTGTACGCTTTACTGACATGATCGACGGCCAg                               >  1:6187650/1‑93 (MQ=255)
                                                             gcgAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGa                              <  2:1865771/93‑1 (MQ=255)
                                                               gAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGAcc                            >  1:3838007/1‑93 (MQ=255)
                                                               gAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGAcc                            >  2:6904272/1‑93 (MQ=255)
                                                                aaaCCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCa                           <  2:5522277/93‑1 (MQ=255)
                                                                aaaCCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCa                           <  2:7287272/93‑1 (MQ=255)
                                                                  aCCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCAtt                         <  2:6739374/93‑1 (MQ=255)
                                                                  aCCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCAtt                         <  2:3562210/93‑1 (MQ=255)
                                                                  aCCGTTCCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCAtt                         >  2:7096921/1‑93 (MQ=255)
                                                                   ccGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTa                        <  1:3493011/93‑1 (MQ=255)
                                                                     gTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTAcg                      >  2:4072655/1‑93 (MQ=255)
                                                                        gCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGt                   >  1:6727169/1‑93 (MQ=255)
                                                                               gggACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACcg            >  1:325316/1‑93 (MQ=255)
                                                                                ggACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACcga           <  1:1567040/93‑1 (MQ=255)
                                                                                ggACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACcga           <  2:6796130/93‑1 (MQ=255)
                                                                                  aCCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACcgacg         >  2:1453761/1‑93 (MQ=255)
                                                                                  aCCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACcgacg         <  1:1092139/93‑1 (MQ=255)
                                                                                   cccGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACcgacga        >  2:2375360/1‑93 (MQ=255)
                                                                                    ccGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGaa       >  1:1998782/1‑93 (MQ=255)
                                                                                     cGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAAc      <  2:5463636/93‑1 (MQ=255)
                                                                                     cGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAAc      >  2:4627537/1‑93 (MQ=255)
                                                                                          |                                                                                           
AGCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGAC  >  NC_000913/4185907‑4186088

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GAAAGCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCG  >  NC_000913/4185904‑4186090
                                                                                              |                                                                                             
GAAAGCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACG                                                                                               <  SRR4302542.3709128/94‑1 (MQ=60)
   AGCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCA                                                                                            >  SRR4302542.2411343/1‑94 (MQ=60)
   AGCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCA                                                                                            >  SRR4302542.203095/1‑94 (MQ=60)
    GCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCAT                                                                                           >  SRR4302542.976843/1‑94 (MQ=60)
    GCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCAT                                                                                           <  SRR4302542.3302229/94‑1 (MQ=60)
     CTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATG                                                                                          <  SRR4302542.5550305/94‑1 (MQ=60)
     CTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATG                                                                                          <  SRR4302542.6976186/94‑1 (MQ=60)
     CTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATG                                                                                          <  SRR4302542.1792709/94‑1 (MQ=60)
     CTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATG                                                                                          <  SRR4302542.2642496/94‑1 (MQ=60)
      TACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGC                                                                                         <  SRR4302542.1357563/94‑1 (MQ=60)
       ACAAGGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCC                                                                                        >  SRR4302542.7039762/1‑94 (MQ=60)
       ACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCC                                                                                        >  SRR4302542.970291/1‑94 (MQ=60)
       ACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCC                                                                                        >  SRR4302542.7344513/1‑94 (MQ=60)
        CAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCG                                                                                       >  SRR4302542.5071427/1‑94 (MQ=60)
        CAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCG                                                                                       <  SRR4302542.1108272/94‑1 (MQ=60)
        CAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCG                                                                                       >  SRR4302542.5398212/1‑94 (MQ=60)
         AAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGG                                                                                      <  SRR4302542.3515749/94‑1 (MQ=60)
         AAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGG                                                                                      >  SRR4302542.4133270/1‑94 (MQ=60)
          AAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGT                                                                                     <  SRR4302542.3159609/94‑1 (MQ=60)
          AAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGT                                                                                     >  SRR4302542.6239598/1‑94 (MQ=60)
           AGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTT                                                                                    >  SRR4302542.2061551/1‑94 (MQ=60)
            GTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTA                                                                                   >  SRR4302542.1621449/1‑94 (MQ=60)
            GTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTA                                                                                   >  SRR4302542.4188620/1‑94 (MQ=60)
            GTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTA                                                                                   <  SRR4302542.4491067/94‑1 (MQ=60)
             TACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTAT                                                                                  >  SRR4302542.1842669/1‑94 (MQ=60)
             TACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTAT                                                                                  >  SRR4302542.4607915/1‑94 (MQ=60)
             TACCTTACGGTGCGGTAATGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCAAGCCGGTTAT                                                                                  >  SRR4302542.6838997/1‑94 (MQ=60)
              ACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATC                                                                                 >  SRR4302542.2589615/1‑94 (MQ=60)
               CCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCCCGCCATGCCGGTTATCC                                                                                >  SRR4302542.5466665/1‑94 (MQ=60)
               CCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCA                                                                                >  SRR4302542.7579513/1‑94 (MQ=60)
                CTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCAC                                                                               <  SRR4302542.3801213/94‑1 (MQ=60)
                CTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCAC                                                                               >  SRR4302542.7358714/1‑94 (MQ=60)
                CTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCAC                                                                               >  SRR4302542.828363/1‑94 (MQ=60)
                  TACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCG                                                                             <  SRR4302542.3550952/94‑1 (MQ=60)
                   ACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGA                                                                            >  SRR4302542.3122131/1‑94 (MQ=60)
                   ACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGA                                                                            >  SRR4302542.5615292/1‑94 (MQ=60)
                    CGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAA                                                                           >  SRR4302542.6840211/1‑94 (MQ=60)
                     GGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAG                                                                          <  SRR4302542.4154973/94‑1 (MQ=60)
                     GGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAG                                                                          >  SRR4302542.4162351/1‑94 (MQ=60)
                      GTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGT                                                                         >  SRR4302542.3371016/1‑94 (MQ=60)
                       TGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTA                                                                        <  SRR4302542.1598795/94‑1 (MQ=60)
                         CGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAG                                                                      <  SRR4302542.4235454/94‑1 (MQ=60)
                         CGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAG                                                                      <  SRR4302542.5842907/94‑1 (MQ=60)
                          GGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGC                                                                     >  SRR4302542.2650775/1‑94 (MQ=60)
                          GGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGC                                                                     <  SRR4302542.836573/94‑1 (MQ=60)
                           GTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCG                                                                    <  SRR4302542.1157022/94‑1 (MQ=60)
                           GTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCG                                                                    >  SRR4302542.4051334/1‑94 (MQ=60)
                           GTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCG                                                                    >  SRR4302542.7061297/1‑94 (MQ=60)
                           GTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCG                                                                    >  SRR4302542.721466/1‑94 (MQ=60)
                            TACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGG                                                                   >  SRR4302542.56709/1‑94 (MQ=60)
                             ACTGGCGAAAGGCGATGGCGGACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGG                                                                  >  SRR4302542.7396420/1‑94 (MQ=60)
                             ACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGT                                                                  <  SRR4302542.2849267/94‑1 (MQ=60)
                             ACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGT                                                                  >  SRR4302542.4923054/1‑94 (MQ=60)
                             ACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGT                                                                  <  SRR4302542.355228/94‑1 (MQ=60)
                              CTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTT                                                                 >  SRR4302542.6077021/1‑94 (MQ=60)
                              CTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGAAAGCGGTT                                                                 >  SRR4302542.7472615/1‑94 (MQ=60)
                              CTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTT                                                                 <  SRR4302542.193028/94‑1 (MQ=60)
                               TGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTT                                                                <  SRR4302542.3360054/94‑1 (MQ=60)
                                GGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTT                                                               <  SRR4302542.5632649/94‑1 (MQ=60)
                                GGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTT                                                               <  SRR4302542.2961489/94‑1 (MQ=60)
                                GGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTT                                                               <  SRR4302542.3659629/94‑1 (MQ=60)
                                GGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTT                                                               >  SRR4302542.3775915/1‑94 (MQ=60)
                                GGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTT                                                               <  SRR4302542.7011998/94‑1 (MQ=60)
                                 GCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTG                                                              <  SRR4302542.3174396/94‑1 (MQ=60)
                                 GCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTG                                                              <  SRR4302542.7072393/94‑1 (MQ=60)
                                  CGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGT                                                             >  SRR4302542.4772160/1‑94 (MQ=60)
                                  CGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGT                                                             >  SRR4302542.2452764/1‑94 (MQ=60)
                                  CGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGT                                                             >  SRR4302542.2607293/1‑94 (MQ=60)
                                  CGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGT                                                             >  SRR4302542.5415512/1‑94 (MQ=60)
                                  CGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGT                                                             <  SRR4302542.7556191/94‑1 (MQ=60)
                                  CGAAAGGCGATGGCGAAAAGGGTTGCTGGGGGGGAAACCGTTGCAAACTGGGACCCCCCCCCCATGCCGGTTTTACCCGAAGTAAGGGGTTTTG                                                              >  SRR4302542.6249287/1‑94 (MQ=26)
                                   GAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTA                                                            <  SRR4302542.1449358/94‑1 (MQ=60)
                                   GAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTA                                                            <  SRR4302542.3700282/94‑1 (MQ=60)
                                   GAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTA                                                            >  SRR4302542.6633832/1‑94 (MQ=60)
                                   GAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTA                                                            >  SRR4302542.5294060/1‑94 (MQ=60)
                                    AAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTAC                                                           <  SRR4302542.6604984/94‑1 (MQ=60)
                                    AAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTAC                                                           >  SRR4302542.2062348/1‑94 (MQ=60)
                                    AAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTAC                                                           <  SRR4302542.7450278/94‑1 (MQ=60)
                                    AAAGGCGATGGCGAACA‑GGGTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTAC                                                           >  SRR4302542.6955106/1‑94 (MQ=60)
                                     AAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACG                                                          <  SRR4302542.4689700/94‑1 (MQ=60)
                                     AAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACG                                                          >  SRR4302542.616710/1‑94 (MQ=60)
                                     AAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGGAAGCGGTTTTGTACG                                                          >  SRR4302542.6557040/1‑94 (MQ=60)
                                      AGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGC                                                         >  SRR4302542.360198/1‑94 (MQ=60)
                                      AGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGC                                                         >  SRR4302542.2737852/1‑94 (MQ=60)
                                      AGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGC                                                         >  SRR4302542.7486162/1‑94 (MQ=60)
                                       GGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCT                                                        >  SRR4302542.1026207/1‑94 (MQ=60)
                                        GCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTT                                                       >  SRR4302542.3757614/1‑94 (MQ=60)
                                         CGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTT                                                      >  SRR4302542.4202272/1‑94 (MQ=60)
                                         CGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTT                                                      >  SRR4302542.1990933/1‑94 (MQ=60)
                                         CGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTT                                                      >  SRR4302542.3210129/1‑94 (MQ=60)
                                          GATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTA                                                     <  SRR4302542.5306757/94‑1 (MQ=60)
                                          GATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTA                                                     >  SRR4302542.4447953/1‑94 (MQ=60)
                                           ATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTAC                                                    >  SRR4302542.6453929/1‑94 (MQ=60)
                                            TGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACT                                                   <  SRR4302542.2356086/94‑1 (MQ=60)
                                             GGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTG                                                  <  SRR4302542.6315638/94‑1 (MQ=60)
                                              GCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGA                                                 >  SRR4302542.3910222/1‑94 (MQ=60)
                                              GCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGA                                                 <  SRR4302542.2469141/94‑1 (MQ=60)
                                               CGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGAC                                                >  SRR4302542.4719748/1‑94 (MQ=60)
                                                GAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACA                                               >  SRR4302542.3088193/1‑94 (MQ=60)
                                                GAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACA                                               >  SRR4302542.6596707/1‑94 (MQ=60)
                                                  ACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATG                                             <  SRR4302542.3758234/94‑1 (MQ=60)
                                                  ACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATG                                             <  SRR4302542.1630046/94‑1 (MQ=60)
                                                   CA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCGCGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGA                                            >  SRR4302542.6275593/1‑94 (MQ=60)
                                                   CA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGA                                            <  SRR4302542.4142633/94‑1 (MQ=60)
                                                   CA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGA                                            >  SRR4302542.824448/1‑94 (MQ=60)
                                                    A‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGAT                                           <  SRR4302542.2176748/94‑1 (MQ=60)
                                                    A‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGAT                                           <  SRR4302542.4730366/94‑1 (MQ=60)
                                                      GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATC                                          <  SRR4302542.6866561/94‑1 (MQ=60)
                                                      GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATC                                          <  SRR4302542.100580/94‑1 (MQ=60)
                                                      GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATC                                          <  SRR4302542.1511843/94‑1 (MQ=60)
                                                      GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATC                                          <  SRR4302542.812021/94‑1 (MQ=60)
                                                      GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATC                                          <  SRR4302542.1058851/94‑1 (MQ=60)
                                                       GTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCG                                         <  SRR4302542.2255304/94‑1 (MQ=60)
                                                       GTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCG                                         <  SRR4302542.7156663/94‑1 (MQ=60)
                                                       GTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCG                                         <  SRR4302542.2000937/94‑1 (MQ=60)
                                                          GCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACG                                      <  SRR4302542.200882/94‑1 (MQ=60)
                                                          GCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACG                                      <  SRR4302542.1877612/94‑1 (MQ=60)
                                                           CTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGG                                     <  SRR4302542.3408352/94‑1 (MQ=60)
                                                            TGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGC                                    <  SRR4302542.2623371/94‑1 (MQ=60)
                                                            TGGCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGC                                    <  SRR4302542.6522853/94‑1 (MQ=60)
                                                              GCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCA                                  <  SRR4302542.699457/94‑1 (MQ=60)
                                                              GCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCA                                  <  SRR4302542.5640398/94‑1 (MQ=60)
                                                              GCGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCA                                  >  SRR4302542.121662/1‑94 (MQ=60)
                                                               CGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAG                                 <  SRR4302542.2063529/94‑1 (MQ=60)
                                                               CGGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGGTATCACCGAAGTAAGCGGGTTTGTACGCTTTACTGACATGATCGACGGCCAG                                 >  SRR4302542.6247761/1‑94 (MQ=60)
                                                               CGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAG                                 <  SRR4302542.21904/94‑1 (MQ=60)
                                                                GGCGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGA                                <  SRR4302542.447665/94‑1 (MQ=60)
                                                                  CGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACC                              <  SRR4302542.941731/94‑1 (MQ=60)
                                                                  CGAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACC                              >  SRR4302542.3875957/1‑94 (MQ=60)
                                                                   GAAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCA                             >  SRR4302542.4611047/1‑94 (MQ=60)
                                                                    AAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCAT                            >  SRR4302542.6493403/1‑94 (MQ=60)
                                                                    AAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCAT                            >  SRR4302542.656675/1‑94 (MQ=60)
                                                                    AAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCAT                            <  SRR4302542.5228932/94‑1 (MQ=60)
                                                                    AAACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCAT                            >  SRR4302542.6198725/1‑94 (MQ=60)
                                                                     AACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATT                           >  SRR4302542.3196587/1‑94 (MQ=60)
                                                                      ACCGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTA                          <  SRR4302542.506450/94‑1 (MQ=60)
                                                                       CCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTAC                         <  SRR4302542.3525673/94‑1 (MQ=60)
                                                                        CGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACG                        <  SRR4302542.7590565/94‑1 (MQ=60)
                                                                        CGTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACG                        >  SRR4302542.3533195/1‑94 (MQ=60)
                                                                        CGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACG                        >  SRR4302542.4442164/1‑94 (MQ=60)
                                                                         GTTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGC                       >  SRR4302542.3386586/1‑94 (MQ=60)
                                                                          TTGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCG                      >  SRR4302542.2326719/1‑94 (MQ=60)
                                                                           TGCAAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGT                     >  SRR4302542.6793396/1‑94 (MQ=60)
                                                                            GCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTC                    >  SRR4302542.1492664/1‑94 (MQ=60)
                                                                              AAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAG                  <  SRR4302542.495089/94‑1 (MQ=60)
                                                                              AAACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAG                  <  SRR4302542.1065679/94‑1 (MQ=60)
                                                                               AACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGA                 <  SRR4302542.5795930/94‑1 (MQ=60)
                                                                                ACTGGGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGAC                <  SRR4302542.7497386/94‑1 (MQ=60)
                                                                                  TGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCG              >  SRR4302542.328138/1‑94 (MQ=60)
                                                                                    GGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGAC            <  SRR4302542.5077067/94‑1 (MQ=60)
                                                                                    GGACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGAC            <  SRR4302542.1580571/94‑1 (MQ=60)
                                                                                     GACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACG           <  SRR4302542.170710/94‑1 (MQ=60)
                                                                                     GACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACG           <  SRR4302542.3618800/94‑1 (MQ=60)
                                                                                      ACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGA          <  SRR4302542.1101497/94‑1 (MQ=60)
                                                                                      ACCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGA          >  SRR4302542.967290/1‑94 (MQ=60)
                                                                                       CCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGCCGAA         >  SRR4302542.5899132/1‑94 (MQ=60)
                                                                                       CCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAA         >  SRR4302542.4591994/1‑94 (MQ=60)
                                                                                       CCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAA         >  SRR4302542.3356735/1‑94 (MQ=60)
                                                                                       CCCGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAA         >  SRR4302542.2016030/1‑94 (MQ=60)
                                                                                        CCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAAC        >  SRR4302542.1350563/1‑94 (MQ=60)
                                                                                         CGCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACT       <  SRR4302542.5320486/94‑1 (MQ=60)
                                                                                         CGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACT       <  SRR4302542.7439990/94‑1 (MQ=60)
                                                                                          GCACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTG      >  SRR4302542.7408442/1‑94 (MQ=60)
                                                                                          GCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTG      >  SRR4302542.3498911/1‑94 (MQ=60)
                                                                                            ACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGAC    <  SRR4302542.1136731/94‑1 (MQ=60)
                                                                                            ACGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGAC    <  SRR4302542.1187637/94‑1 (MQ=60)
                                                                                             CGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACC   >  SRR4302542.5156524/1‑94 (MQ=60)
                                                                                             CGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACC   <  SRR4302542.7154381/94‑1 (MQ=60)
                                                                                             CGCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACC   >  SRR4302542.6457162/1‑94 (MQ=60)
                                                                                              GCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCG  >  SRR4302542.3457578/1‑94 (MQ=60)
                                                                                              GCCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCG  >  SRR4302542.6755097/1‑94 (MQ=60)
                                                                                              |                                                                                             
GAAAGCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACA‑GGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCG  >  NC_000913/4185904‑4186090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑