Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,262,748 A→G T286A (ACC→GCC)  dnaB → replicative DNA helicase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,262,7480AG87.1% 838.6 / 104.7 342T286A (ACC→GCC) dnaBreplicative DNA helicase
Reads supporting (aligned to +/- strand):  ref base A (27/17);  new base G (134/164);  total (161/181)
Fisher's exact test for biased strand distribution p-value = 5.19e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01

Only 100 of 343 total aligned reads displayed.

GGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGACTCCTCC  >  NC_000913/4262657‑4262840
                                                                                           |                                                                                            
 gTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGcc                                                                                            >  2:4609669/1‑93 (MQ=255)
  tACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCg                                                                                           >  2:250323/1‑93 (MQ=255)
   aCTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCgg                                                                                          <  1:4702208/93‑1 (MQ=255)
   aCTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCgg                                                                                          >  1:1989946/1‑93 (MQ=255)
   aCTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCgg                                                                                          >  2:1745375/1‑93 (MQ=255)
    cTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCggg                                                                                         >  1:6106001/1‑93 (MQ=255)
     ttATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGc                                                                                        <  2:4967185/93‑1 (MQ=255)
     ttATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGc                                                                                        >  1:5875884/1‑93 (MQ=255)
     ttATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGc                                                                                        >  2:4137376/1‑93 (MQ=255)
     ttATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGc                                                                                        >  1:4563679/1‑93 (MQ=255)
        tcttctCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGc                                                                                     >  2:2282024/1‑93 (MQ=255)
        tcttctCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGc                                                                                     <  2:7526106/93‑1 (MQ=255)
        tcttctCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGc                                                                                     <  1:5498933/93‑1 (MQ=255)
        tcttctCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGc                                                                                     >  1:1412076/1‑93 (MQ=255)
          ttctCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTc                                                                                   >  1:2148263/1‑93 (MQ=255)
           tctcGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCg                                                                                  >  2:3759531/1‑93 (MQ=255)
             tcGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGAt                                                                                >  1:7230238/1‑93 (MQ=255)
             tcGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGAt                                                                                <  2:4502897/93‑1 (MQ=255)
               gCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGa                                                                              <  2:2710963/93‑1 (MQ=255)
               gCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGa                                                                              >  2:4289543/1‑93 (MQ=255)
                cTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGAc                                                                             <  1:2480841/93‑1 (MQ=255)
                 tGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACg                                                                            >  1:2550267/1‑93 (MQ=255)
                   gagaTGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGaa                                                                          >  2:950705/1‑93 (MQ=255)
                     gaTGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGa                                                                        <  1:1192748/93‑1 (MQ=255)
                     gaTGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGa                                                                        >  1:3405757/1‑93 (MQ=255)
                      aTGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGAc                                                                       <  2:6833551/93‑1 (MQ=255)
                       tGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACt                                                                      >  2:5171281/1‑93 (MQ=255)
                         ccATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTgg                                                                    <  1:5752162/93‑1 (MQ=255)
                          cATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTggg                                                                   <  2:3668385/93‑1 (MQ=255)
                           aTCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGgc                                                                  >  1:711132/1‑93 (MQ=255)
                           aTCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATCACGAAGACTGGgc                                                                  >  1:3202275/1‑93 (MQ=255)
                            tCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGgcg                                                                 >  1:238455/1‑93 (MQ=255)
                            tCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGgcg                                                                 >  2:3304533/1‑93 (MQ=255)
                              aGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGgcgcg                                                               >  1:3705993/1‑93 (MQ=255)
                              aGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGgcgcg                                                               >  1:2981684/1‑93 (MQ=255)
                              aGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGgcgcg                                                               >  2:912175/1‑93 (MQ=255)
                              aGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGgcgcg                                                               >  2:7283763/1‑93 (MQ=255)
                              aGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGgcgcg                                                               >  1:262434/1‑93 (MQ=255)
                              aGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGgcgcg                                                               >  1:1564082/1‑93 (MQ=255)
                               gAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGgcgcgc                                                              >  1:6478404/1‑93 (MQ=255)
                               gAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGgcgcgc                                                              >  1:4461803/1‑93 (MQ=255)
                               gAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGgcgcgc                                                              >  2:1628962/1‑93 (MQ=255)
                               gAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGgcgcgc                                                              >  2:6575631/1‑93 (MQ=255)
                                  cAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCAtt                                                           >  2:239569/1‑93 (MQ=255)
                                   aGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCAttt                                                          >  1:6681825/1‑93 (MQ=255)
                                    gATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTc                                                         >  1:693178/1‑93 (MQ=255)
                                    gATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTc                                                         <  2:7001451/93‑1 (MQ=255)
                                    gATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTc                                                         <  2:6150396/93‑1 (MQ=255)
                                    gATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTc                                                         >  2:577569/1‑93 (MQ=255)
                                     aTCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTcc                                                        >  1:6400583/1‑93 (MQ=255)
                                      tCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCg                                                       <  2:2901864/93‑1 (MQ=255)
                                      tCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCg                                                       <  1:54136/93‑1 (MQ=255)
                                         tgatgCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCa                                                    >  1:3506361/1‑93 (MQ=255)
                                          gatgCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCAc                                                   >  2:1313652/1‑93 (MQ=255)
                                             gCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCAt                                                <  1:7373157/93‑1 (MQ=255)
                                              cGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATg                                               <  1:187031/93‑1 (MQ=255)
                                               gTTCTCTGGAGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATgg                                              <  2:1006312/93‑1 (MQ=255)
                                                ttCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATggg                                             >  1:7007762/1‑93 (MQ=255)
                                                ttCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATggg                                             >  1:5215079/1‑93 (MQ=255)
                                                  ctctGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTa                                           >  1:5351852/1‑93 (MQ=255)
                                                   tctGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTAt                                          >  2:457325/1‑93 (MQ=255)
                                                   tctGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTAt                                          <  1:4456439/93‑1 (MQ=255)
                                                   tctGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTAt                                          >  1:6624275/1‑93 (MQ=255)
                                                   tctGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTAt                                          >  2:3507969/1‑93 (MQ=255)
                                                     tGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTAttt                                        >  2:4866046/1‑93 (MQ=255)
                                                     tGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTAttt                                        >  1:2879181/1‑93 (MQ=255)
                                                      ggCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTAtttt                                       <  2:6384609/93‑1 (MQ=255)
                                                        cGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGc                                     <  1:4797760/93‑1 (MQ=255)
                                                        cGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGc                                     <  2:357931/93‑1 (MQ=255)
                                                        cGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGc                                     <  2:4398720/93‑1 (MQ=255)
                                                         gTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCt                                    <  2:1859113/93‑1 (MQ=255)
                                                          tCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTc                                   <  2:1463074/93‑1 (MQ=255)
                                                          tCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTc                                   >  2:3340155/1‑93 (MQ=255)
                                                          tCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTc                                   <  1:5600737/93‑1 (MQ=255)
                                                             cTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGaa                                >  1:5000070/1‑93 (MQ=255)
                                                             cTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGaa                                >  1:7516153/1‑93 (MQ=255)
                                                               gTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGaaaa                              >  2:3862831/1‑93 (MQ=255)
                                                                tCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGaaaaa                             <  1:3296047/93‑1 (MQ=255)
                                                                tCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGaaaaa                             <  2:5385415/93‑1 (MQ=255)
                                                                 cgcgcgTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAAc                            <  1:846014/93‑1 (MQ=255)
                                                                    gcgTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCa                         >  2:2204945/1‑93 (MQ=255)
                                                                     cgTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCaa                        <  2:3001992/93‑1 (MQ=255)
                                                                      gTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAat                       <  2:6187614/93‑1 (MQ=255)
                                                                      gTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAat                       >  1:1105329/1‑93 (MQ=255)
                                                                      gTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAat                       >  1:1012420/1‑93 (MQ=255)
                                                                       ttGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAata                      >  1:406474/1‑93 (MQ=255)
                                                                        tGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAatat                     <  2:3993303/93‑1 (MQ=255)
                                                                           ccAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCta                  <  1:5815850/93‑1 (MQ=255)
                                                                           ccAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCta                  <  1:4021709/93‑1 (MQ=255)
                                                                           ccAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCta                  <  1:388377/93‑1 (MQ=255)
                                                                            cAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCtat                 <  2:1565975/93‑1 (MQ=255)
                                                                             aGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCtata                <  1:5960919/93‑1 (MQ=255)
                                                                              gACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTatat               <  1:6586147/93‑1 (MQ=255)
                                                                                  aaaaTCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGAt           <  2:5268054/93‑1 (MQ=255)
                                                                                  aaaaTCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGAt           <  1:739918/93‑1 (MQ=255)
                                                                                   aaaTCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATg          <  2:812540/93‑1 (MQ=255)
                                                                                    aaTCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGa         <  2:5612937/93‑1 (MQ=255)
                                                                                    aaTCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGa         <  1:3459365/93‑1 (MQ=255)
                                                                                        cGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGActcc     <  1:2842238/93‑1 (MQ=255)
                                                                                          tACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATAGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGActcctc   <  2:1349494/93‑1 (MQ=255)
                                                                                           |                                                                                            
GGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGACTCCTCC  >  NC_000913/4262657‑4262840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGACTCCTCCG  >  NC_000913/4262655‑4262841
                                                                                             |                                                                                             
CCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTG                                                                                               <  SRR4302542.6582595/94‑1 (MQ=60)
CCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTG                                                                                               <  SRR4302542.2741584/94‑1 (MQ=60)
 CGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGC                                                                                              <  SRR4302542.35996/94‑1 (MQ=60)
 CGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGC                                                                                              <  SRR4302542.2271021/94‑1 (MQ=60)
  GGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACC                                                                                             <  SRR4302542.2511994/94‑1 (MQ=60)
   GTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCG                                                                                            >  SRR4302542.3513188/1‑94 (MQ=60)
    TACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGG                                                                                           >  SRR4302542.2007116/1‑94 (MQ=60)
    TACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGG                                                                                           <  SRR4302542.6035397/94‑1 (MQ=60)
    TACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGG                                                                                           <  SRR4302542.2552019/94‑1 (MQ=60)
     ACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGG                                                                                          <  SRR4302542.4748099/94‑1 (MQ=60)
     ACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGG                                                                                          >  SRR4302542.4103064/1‑94 (MQ=60)
     ACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGG                                                                                          <  SRR4302542.79357/94‑1 (MQ=60)
     ACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGG                                                                                          >  SRR4302542.6165102/1‑94 (MQ=60)
      CTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGC                                                                                         >  SRR4302542.5932843/1‑94 (MQ=60)
      CTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGC                                                                                         >  SRR4302542.4608357/1‑94 (MQ=60)
       TTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCA                                                                                        >  SRR4302542.6003835/1‑94 (MQ=60)
        TATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAG                                                                                       <  SRR4302542.7180255/94‑1 (MQ=60)
         ATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGC                                                                                      >  SRR4302542.2331055/1‑94 (MQ=60)
         ATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGC                                                                                      >  SRR4302542.5296930/1‑94 (MQ=60)
         ATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGC                                                                                      >  SRR4302542.1424282/1‑94 (MQ=60)
          TCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCT                                                                                     <  SRR4302542.5568137/94‑1 (MQ=60)
          TCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCT                                                                                     <  SRR4302542.5552344/94‑1 (MQ=60)
          TCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCT                                                                                     <  SRR4302542.1673331/94‑1 (MQ=60)
           CTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTC                                                                                    >  SRR4302542.2166783/1‑94 (MQ=60)
           CTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTC                                                                                    >  SRR4302542.1131703/1‑94 (MQ=60)
            TTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCG                                                                                   <  SRR4302542.3614696/94‑1 (MQ=60)
            TTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCG                                                                                   >  SRR4302542.4673653/1‑94 (MQ=60)
             TCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGA                                                                                  >  SRR4302542.6261491/1‑94 (MQ=60)
              CTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGAT                                                                                 <  SRR4302542.2856964/94‑1 (MQ=60)
              CTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGAT                                                                                 <  SRR4302542.4785430/94‑1 (MQ=60)
              CTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGAT                                                                                 >  SRR4302542.7301165/1‑94 (MQ=60)
              CTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGAT                                                                                 >  SRR4302542.7466584/1‑94 (MQ=60)
               TCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATG                                                                                >  SRR4302542.5988732/1‑94 (MQ=60)
                 GCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGAC                                                                              <  SRR4302542.2572627/94‑1 (MQ=60)
                 GCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGAC                                                                              <  SRR4302542.6936782/94‑1 (MQ=60)
                  CTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACG                                                                             <  SRR4302542.2504895/94‑1 (MQ=60)
                  CTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACG                                                                             >  SRR4302542.2574983/1‑94 (MQ=60)
                   TGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGA                                                                            >  SRR4302542.546864/1‑94 (MQ=60)
                   TGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGA                                                                            >  SRR4302542.1991061/1‑94 (MQ=60)
                    GGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAA                                                                           >  SRR4302542.3264760/1‑94 (MQ=60)
                    GGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAA                                                                           <  SRR4302542.135642/94‑1 (MQ=60)
                    GGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAA                                                                           <  SRR4302542.3921701/94‑1 (MQ=60)
                     GAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAG                                                                          >  SRR4302542.1668849/1‑94 (MQ=60)
                      AGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGA                                                                         >  SRR4302542.2959790/1‑94 (MQ=60)
                      AGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGA                                                                         >  SRR4302542.3437681/1‑94 (MQ=60)
                       GATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGAC                                                                        <  SRR4302542.1203019/94‑1 (MQ=60)
                       GATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGAC                                                                        >  SRR4302542.3523266/1‑94 (MQ=60)
                        ATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACT                                                                       >  SRR4302542.2732474/1‑94 (MQ=60)
                        ATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACT                                                                       >  SRR4302542.1158758/1‑94 (MQ=60)
                         TGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTG                                                                      <  SRR4302542.6195604/94‑1 (MQ=60)
                         TGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTG                                                                      >  SRR4302542.7179823/1‑94 (MQ=60)
                         TGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTG                                                                      >  SRR4302542.2052188/1‑94 (MQ=60)
                          GCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGG                                                                     <  SRR4302542.5846297/94‑1 (MQ=60)
                          GCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGG                                                                     <  SRR4302542.749776/94‑1 (MQ=60)
                           CCATCAGAACAGATCATGATGCGTTCTCTGGCGTCTCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGG                                                                    <  SRR4302542.5808004/94‑1 (MQ=60)
                           CCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGG                                                                    >  SRR4302542.6636260/1‑94 (MQ=60)
                           CCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGG                                                                    <  SRR4302542.876663/94‑1 (MQ=60)
                           CCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGG                                                                    <  SRR4302542.3397589/94‑1 (MQ=60)
                           CCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGG                                                                    <  SRR4302542.5808003/94‑1 (MQ=60)
                            CATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGC                                                                   >  SRR4302542.717270/1‑94 (MQ=60)
                            CATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGC                                                                   <  SRR4302542.103441/94‑1 (MQ=60)
                            CATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATCACGAAGACTGGGC                                                                   >  SRR4302542.3232614/1‑94 (MQ=60)
                            CATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAACCCGTGCCGGGCAGCTCGATGACGAAGACTGGGC                                                                   <  SRR4302542.5130335/94‑1 (MQ=60)
                             ATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCG                                                                  >  SRR4302542.449501/1‑94 (MQ=60)
                             ATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCG                                                                  >  SRR4302542.240505/1‑94 (MQ=60)
                             ATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCG                                                                  <  SRR4302542.4232792/94‑1 (MQ=60)
                             ATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCG                                                                  <  SRR4302542.5437595/94‑1 (MQ=60)
                               CAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCG                                                                >  SRR4302542.3010235/1‑94 (MQ=60)
                               CAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCG                                                                >  SRR4302542.766723/1‑94 (MQ=60)
                               CAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCG                                                                >  SRR4302542.3742662/1‑94 (MQ=60)
                               CAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCG                                                                >  SRR4302542.264673/1‑94 (MQ=60)
                               CAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCG                                                                <  SRR4302542.2051020/94‑1 (MQ=60)
                               CAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCG                                                                >  SRR4302542.1577595/1‑94 (MQ=60)
                                AGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGC                                                               >  SRR4302542.6542227/1‑94 (MQ=60)
                                AGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGC                                                               >  SRR4302542.4505567/1‑94 (MQ=60)
                                AGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGC                                                               >  SRR4302542.1436840/1‑94 (MQ=60)
                                   ACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATT                                                            <  SRR4302542.1663247/94‑1 (MQ=60)
                                    CAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTT                                                           <  SRR4302542.2248125/94‑1 (MQ=60)
                                    CAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTT                                                           <  SRR4302542.4504647/94‑1 (MQ=60)
                                    CAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTT                                                           >  SRR4302542.6747647/1‑94 (MQ=60)
                                    CAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCATTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTT                                                           <  SRR4302542.6471170/94‑1 (MQ=60)
                                     AGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTC                                                          >  SRR4302542.2745853/1‑94 (MQ=60)
                                     AGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTC                                                          >  SRR4302542.699171/1‑94 (MQ=60)
                                      GATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCC                                                         >  SRR4302542.4544696/1‑94 (MQ=60)
                                      GATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCC                                                         >  SRR4302542.1984621/1‑94 (MQ=60)
                                      GATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCC                                                         <  SRR4302542.483936/94‑1 (MQ=60)
                                      GATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCC                                                         >  SRR4302542.6463652/1‑94 (MQ=60)
                                      GATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCC                                                         <  SRR4302542.2921209/94‑1 (MQ=60)
                                      GATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCC                                                         <  SRR4302542.3035718/94‑1 (MQ=60)
                                      GATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCC                                                         <  SRR4302542.3810511/94‑1 (MQ=60)
                                      GATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCC                                                         >  SRR4302542.5487316/1‑94 (MQ=60)
                                      GATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCC                                                         >  SRR4302542.3367183/1‑94 (MQ=60)
                                       ATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCG                                                        >  SRR4302542.5300592/1‑94 (MQ=60)
                                       ATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCG                                                        <  SRR4302542.3280428/94‑1 (MQ=60)
                                        TCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGG                                                       <  SRR4302542.54576/94‑1 (MQ=60)
                                         CATGATGCTTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGC                                                      <  SRR4302542.4089592/94‑1 (MQ=60)
                                          ATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCA                                                     >  SRR4302542.3539155/1‑94 (MQ=60)
                                            GATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACC                                                   <  SRR4302542.7073279/94‑1 (MQ=60)
                                             ATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCA                                                  >  SRR4302542.4022170/1‑94 (MQ=60)
                                             ATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCA                                                  <  SRR4302542.2944790/94‑1 (MQ=60)
                                             ATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCA                                                  >  SRR4302542.2895268/1‑94 (MQ=60)
                                              TGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCAT                                                 >  SRR4302542.7428815/1‑94 (MQ=60)
                                               GCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATG                                                <  SRR4302542.7445362/94‑1 (MQ=60)
                                               GCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATG                                                <  SRR4302542.3492214/94‑1 (MQ=60)
                                                CGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGG                                               <  SRR4302542.188619/94‑1 (MQ=60)
                                                CGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGG                                               >  SRR4302542.5896363/1‑94 (MQ=60)
                                                 GTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGG                                              >  SRR4302542.3417660/1‑94 (MQ=60)
                                                 GTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGG                                              >  SRR4302542.7076601/1‑94 (MQ=60)
                                                 GTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGG                                              <  SRR4302542.6582043/94‑1 (MQ=60)
                                                 GTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGG                                              <  SRR4302542.3481566/94‑1 (MQ=60)
                                                 GTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGG                                              >  SRR4302542.5265792/1‑94 (MQ=60)
                                                   TCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTA                                            <  SRR4302542.5159024/94‑1 (MQ=60)
                                                   TCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTA                                            >  SRR4302542.5403864/1‑94 (MQ=60)
                                                    CTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTAT                                           <  SRR4302542.4696988/94‑1 (MQ=60)
                                                    CTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTAT                                           >  SRR4302542.6689587/1‑94 (MQ=60)
                                                    CTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTAT                                           >  SRR4302542.648565/1‑94 (MQ=60)
                                                     TCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATT                                          >  SRR4302542.5903359/1‑94 (MQ=60)
                                                     TCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATT                                          <  SRR4302542.4230462/94‑1 (MQ=60)
                                                     TCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATT                                          <  SRR4302542.4500151/94‑1 (MQ=60)
                                                     TCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATT                                          >  SRR4302542.7466994/1‑94 (MQ=60)
                                                      CTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTT                                         >  SRR4302542.6999196/1‑94 (MQ=60)
                                                      CTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTT                                         <  SRR4302542.1501051/94‑1 (MQ=60)
                                                      CTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTT                                         <  SRR4302542.5274469/94‑1 (MQ=60)
                                                      CTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTT                                         >  SRR4302542.2906843/1‑94 (MQ=60)
                                                       TGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTT                                        >  SRR4302542.1238928/1‑94 (MQ=60)
                                                       TGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTT                                        <  SRR4302542.2470199/94‑1 (MQ=60)
                                                       TGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTT                                        >  SRR4302542.7328555/1‑94 (MQ=60)
                                                          CGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCT                                     <  SRR4302542.4844502/94‑1 (MQ=60)
                                                           GTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTC                                    >  SRR4302542.4027827/1‑94 (MQ=60)
                                                           GTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTC                                    <  SRR4302542.7294551/94‑1 (MQ=60)
                                                           GTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTC                                    >  SRR4302542.2457114/1‑94 (MQ=60)
                                                            TCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCG                                   <  SRR4302542.5655146/94‑1 (MQ=60)
                                                            TCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCG                                   <  SRR4302542.4760648/94‑1 (MQ=60)
                                                            TCGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCG                                   <  SRR4302542.5636293/94‑1 (MQ=60)
                                                             CGCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGA                                  >  SRR4302542.5471548/1‑94 (MQ=60)
                                                              GCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAA                                 >  SRR4302542.5048643/1‑94 (MQ=60)
                                                              GCTGTCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAA                                 >  SRR4302542.7590067/1‑94 (MQ=60)
                                                                  TCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCCCCATGGGTATTTTGCTCGAAAAAC                             <  SRR4302542.2589515/94‑1 (MQ=60)
                                                                  TCGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAAC                             <  SRR4302542.3327148/94‑1 (MQ=60)
                                                                   CGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACG                            <  SRR4302542.853305/94‑1 (MQ=60)
                                                                   CGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACG                            <  SRR4302542.5001512/94‑1 (MQ=60)
                                                                   CGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACG                            >  SRR4302542.6738635/1‑94 (MQ=60)
                                                                   CGCGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACG                            <  SRR4302542.631860/94‑1 (MQ=60)
                                                                     CGCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCA                          <  SRR4302542.4242306/94‑1 (MQ=60)
                                                                      GCGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAA                         <  SRR4302542.4899298/94‑1 (MQ=60)
                                                                       CGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAAT                        >  SRR4302542.1114778/1‑94 (MQ=60)
                                                                       CGTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAAT                        >  SRR4302542.1021140/1‑94 (MQ=60)
                                                                        GTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATA                       >  SRR4302542.6935146/1‑94 (MQ=60)
                                                                        GTTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATA                       >  SRR4302542.409987/1‑94 (MQ=60)
                                                                         TTGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATAT                      <  SRR4302542.800162/94‑1 (MQ=60)
                                                                          TGACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATC                     <  SRR4302542.4571906/94‑1 (MQ=60)
                                                                           GACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCT                    >  SRR4302542.6719277/1‑94 (MQ=60)
                                                                           GACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCT                    <  SRR4302542.1222229/94‑1 (MQ=60)
                                                                           GACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCT                    <  SRR4302542.6632875/94‑1 (MQ=60)
                                                                            ACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTA                   <  SRR4302542.6652140/94‑1 (MQ=60)
                                                                            ACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTA                   <  SRR4302542.2049213/94‑1 (MQ=60)
                                                                            ACCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTA                   <  SRR4302542.7023245/94‑1 (MQ=60)
                                                                            ACCAGACTAAAATCCGTGCCGGGCAGCTCGA‑GACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTAT                  >  SRR4302542.260399/1‑94 (MQ=60)
                                                                             CCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTAT                  <  SRR4302542.4061394/94‑1 (MQ=60)
                                                                             CCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTAT                  <  SRR4302542.4576702/94‑1 (MQ=60)
                                                                             CCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTAT                  >  SRR4302542.1105158/1‑94 (MQ=60)
                                                                             CCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTAT                  <  SRR4302542.391743/94‑1 (MQ=60)
                                                                             CCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTAT                  <  SRR4302542.7572074/94‑1 (MQ=60)
                                                                             CCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTAT                  <  SRR4302542.5872316/94‑1 (MQ=60)
                                                                             CCAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTAT                  >  SRR4302542.5729271/1‑94 (MQ=60)
                                                                              CAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATA                 >  SRR4302542.719427/1‑94 (MQ=60)
                                                                              CAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATA                 >  SRR4302542.3473371/1‑94 (MQ=60)
                                                                              CAGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATA                 <  SRR4302542.3686344/94‑1 (MQ=60)
                                                                               AGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATAT                <  SRR4302542.6018635/94‑1 (MQ=60)
                                                                               AGACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATAT                <  SRR4302542.6018634/94‑1 (MQ=60)
                                                                                GACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATC               <  SRR4302542.6651037/94‑1 (MQ=60)
                                                                                 ACTAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCG              <  SRR4302542.3206934/94‑1 (MQ=60)
                                                                                 ACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCG              >  SRR4302542.7171301/1‑94 (MQ=60)
                                                                                  CTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGA             >  SRR4302542.897203/1‑94 (MQ=60)
                                                                                   TAAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGAT            <  SRR4302542.6113139/94‑1 (MQ=60)
                                                                                    AAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATG           <  SRR4302542.3803206/94‑1 (MQ=60)
                                                                                    AAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATG           <  SRR4302542.746338/94‑1 (MQ=60)
                                                                                    AAAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATG           <  SRR4302542.544092/94‑1 (MQ=60)
                                                                                     AAATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGA          <  SRR4302542.2880114/94‑1 (MQ=60)
                                                                                      AATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGAC         <  SRR4302542.6660606/94‑1 (MQ=60)
                                                                                      AATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGAC         <  SRR4302542.3491758/94‑1 (MQ=60)
                                                                                      AATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGAC         <  SRR4302542.5712619/94‑1 (MQ=60)
                                                                                      AATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGAC         >  SRR4302542.7363002/1‑94 (MQ=60)
                                                                                       ATCCGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGACT        >  SRR4302542.566865/1‑94 (MQ=60)
                                                                                          CGTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGACTCCT     <  SRR4302542.2869544/94‑1 (MQ=60)
                                                                                           GTGCCGGGCAGCTCGATGACGAAGACTGGGCGGGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGACTCCTC    >  SRR4302542.4530006/1‑94 (MQ=60)
                                                                                           GTGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGACTCCTC    >  SRR4302542.1331221/1‑94 (MQ=60)
                                                                                            TGCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGACTCCTCC   >  SRR4302542.4878876/1‑94 (MQ=60)
                                                                                             GCCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGACTCCTCCG  <  SRR4302542.6060170/94‑1 (MQ=60)
                                                                                             |                                                                                             
CCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGACTCCTCCG  >  NC_000913/4262655‑4262841

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑