Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,595,908 |
T→C |
Q355R (CAG→CGG) |
mdoB ← |
phosphoglycerol transferase I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,595,908 | 0 | T | C | 85.3%
| 736.5
/ 119.7
| 313 | Q355R (CAG→CGG) | mdoB | phosphoglycerol transferase I |
| Reads supporting (aligned to +/- strand): ref base T (23/23); new base C (125/142); total (148/165) |
| Fisher's exact test for biased strand distribution p-value = 7.50e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.32e-01 |
Only 100 of 314 total aligned reads displayed.
TCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGG > NC_000913/4595816‑4595999
|
cATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTg < 1:548750/93‑1 (MQ=255)
tCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGc > 2:6287579/1‑93 (MQ=255)
tCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGc < 1:767963/93‑1 (MQ=255)
aaTGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAAc < 1:7464982/93‑1 (MQ=255)
tGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACtt < 1:5200687/93‑1 (MQ=255)
gTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTAc < 2:3980455/93‑1 (MQ=255)
gTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTAc < 1:5410504/93‑1 (MQ=255)
gTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTAc < 2:4222082/93‑1 (MQ=255)
tCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTAcc < 2:1414279/93‑1 (MQ=255)
tCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTAcc < 2:7430625/93‑1 (MQ=255)
agaagaGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACcgc < 1:2248799/93‑1 (MQ=255)
gaagaGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACcgcg > 1:3036295/1‑93 (MQ=255)
agagACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCt > 1:1523460/1‑93 (MQ=255)
gagaCGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTg > 2:3068988/1‑93 (MQ=255)
gagaCGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTg > 1:3115027/1‑93 (MQ=255)
agaCGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCTCGCTGa < 2:5772086/93‑1 (MQ=255)
gacgacGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGaa < 2:3603334/93‑1 (MQ=255)
acgaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGAc > 1:4547463/1‑93 (MQ=255)
cgaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACt < 2:6619903/93‑1 (MQ=255)
gaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTg > 2:3561534/1‑93 (MQ=255)
gaTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTg > 1:6342014/1‑93 (MQ=255)
aTGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGa > 1:595212/1‑93 (MQ=255)
tGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGAt < 2:175344/93‑1 (MQ=255)
tGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGAt < 2:4414967/93‑1 (MQ=255)
tGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGAt > 2:3745375/1‑93 (MQ=255)
tGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGAt < 2:2440490/93‑1 (MQ=255)
gACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGAtt > 2:6709688/1‑93 (MQ=255)
aCGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTc < 2:414397/93‑1 (MQ=255)
aCGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTc < 2:6300790/93‑1 (MQ=255)
cGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCg > 1:4064921/1‑93 (MQ=255)
ggTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCgg < 2:210969/93‑1 (MQ=255)
gTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGt > 1:3211965/1‑93 (MQ=255)
gTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGt > 2:4744566/1‑93 (MQ=255)
tATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGtt > 1:1277651/1‑93 (MQ=255)
caTCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGtt < 1:2757677/92‑1 (MQ=255)
aTCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGttt < 1:1040788/93‑1 (MQ=255)
aTCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGttt > 1:2021229/1‑93 (MQ=255)
aTCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGttt > 1:5881554/1‑93 (MQ=255)
tCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTa > 1:1903015/1‑93 (MQ=255)
tCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTa > 2:2539268/1‑93 (MQ=255)
tCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTa < 2:3862318/93‑1 (MQ=255)
cTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAc < 1:1765378/93‑1 (MQ=255)
tttAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAcc < 1:7146518/93‑1 (MQ=255)
tttAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAcc < 1:3936428/93‑1 (MQ=255)
ttAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCg > 1:6255512/1‑93 (MQ=255)
tAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGt > 2:5541501/1‑93 (MQ=255)
tAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGt > 1:5587137/1‑93 (MQ=255)
aaCCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCa < 1:3881632/93‑1 (MQ=255)
ccACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCaaa < 1:5105152/93‑1 (MQ=255)
ggTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCa < 2:1215206/93‑1 (MQ=255)
gACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCatat < 1:1348416/93‑1 (MQ=255)
aCGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtt < 1:2878807/93‑1 (MQ=255)
cGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAttt < 1:2627462/93‑1 (MQ=255)
cGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAttt > 2:5632797/1‑93 (MQ=255)
gCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtttt < 1:4324972/93‑1 (MQ=255)
cTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAttttt < 1:359048/93‑1 (MQ=255)
cTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAttttt > 2:651767/1‑93 (MQ=255)
cTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAttttt > 2:863496/1‑93 (MQ=255)
cTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAttttt > 1:1255451/1‑93 (MQ=255)
tttGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtttttt < 2:5442180/93‑1 (MQ=255)
tttGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtttttt > 2:5981210/1‑93 (MQ=255)
tttGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAtttttt > 1:921782/1‑93 (MQ=255)
ttGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTg > 2:5922335/1‑93 (MQ=255)
ttGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTg < 2:2622139/93‑1 (MQ=255)
ttGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTg < 1:2488002/93‑1 (MQ=255)
tGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGc < 2:2858374/93‑1 (MQ=255)
tGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGc < 2:5086765/93‑1 (MQ=255)
tGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGc < 1:7034236/93‑1 (MQ=255)
gATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCg < 1:6521385/93‑1 (MQ=255)
gATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCg < 1:6285469/93‑1 (MQ=255)
gATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCg < 1:3373241/93‑1 (MQ=255)
ttttGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGt > 2:3266169/1‑93 (MQ=255)
ttttGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGt > 1:3799992/1‑93 (MQ=255)
ttgttgATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTa < 2:7316369/93‑1 (MQ=255)
tgttgATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTAc < 2:1932190/93‑1 (MQ=255)
tgttgATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTAc < 1:6618592/93‑1 (MQ=255)
gttgATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACa > 1:1609571/1‑93 (MQ=255)
ttgATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAg < 2:3296434/93‑1 (MQ=255)
tgATAAACGTCGCGATGTTCTCCCGGCTGCGACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAgg < 2:6112537/93‑1 (MQ=255)
aaCGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACga < 2:1019171/93‑1 (MQ=255)
aaCGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACga < 2:2885705/93‑1 (MQ=255)
aCGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgag < 2:7125187/93‑1 (MQ=255)
gTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgagag > 2:5152435/1‑93 (MQ=255)
gTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgagag > 2:6991028/1‑93 (MQ=255)
tCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACgagaga > 1:4832347/1‑93 (MQ=255)
cgcgATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGAt < 1:6104528/93‑1 (MQ=255)
gcgATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATa > 1:527975/1‑93 (MQ=255)
gcgATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATa > 2:6337705/1‑93 (MQ=255)
gcgATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATa > 1:4203417/1‑93 (MQ=255)
cgATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATaa < 1:6371125/93‑1 (MQ=255)
gATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATaaa > 1:68693/1‑93 (MQ=255)
aTGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATaaaa > 1:353988/1‑93 (MQ=255)
gTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAAcc < 1:2053308/93‑1 (MQ=255)
ttCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCa > 2:3765741/1‑93 (MQ=255)
ttCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCa > 1:4704889/1‑93 (MQ=255)
ctcCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATc < 2:719782/93‑1 (MQ=255)
tcCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATcc < 2:7242057/93‑1 (MQ=255)
tcCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATcc > 2:6181614/1‑93 (MQ=255)
tcCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATcc > 1:1477116/1‑93 (MQ=255)
cTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCgg > 1:2374393/1‑93 (MQ=255)
|
TCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGG > NC_000913/4595816‑4595999
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGT > NC_000913/4595815‑4596001
|
TTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCT < SRR4302542.784670/94‑1 (MQ=60)
TTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCC < SRR4302542.4245982/94‑1 (MQ=60)
TTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCC > SRR4302542.6338061/1‑94 (MQ=60)
TCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTG < SRR4302542.1975954/94‑1 (MQ=60)
CATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGG < SRR4302542.128143/94‑1 (MQ=60)
CATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGG < SRR4302542.553486/94‑1 (MQ=60)
CATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGG > SRR4302542.6665948/1‑94 (MQ=60)
CATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGG > SRR4302542.4239022/1‑94 (MQ=60)
TCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCT < SRR4302542.774613/94‑1 (MQ=60)
TCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCT < SRR4302542.2135458/94‑1 (MQ=60)
CGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTG < SRR4302542.6839838/94‑1 (MQ=60)
CGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTG < SRR4302542.6393575/94‑1 (MQ=60)
CTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCA > SRR4302542.4992305/1‑94 (MQ=60)
AATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACT < SRR4302542.7538116/94‑1 (MQ=60)
AATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACT > SRR4302542.6409799/1‑94 (MQ=60)
ATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTT > SRR4302542.1673577/1‑94 (MQ=60)
ATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTT > SRR4302542.3374651/1‑94 (MQ=60)
TGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTA > SRR4302542.5324632/1‑94 (MQ=60)
TGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTA < SRR4302542.5251224/94‑1 (MQ=60)
GTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACC < SRR4302542.5463056/94‑1 (MQ=60)
GTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACC < SRR4302542.760369/94‑1 (MQ=60)
GTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACC < SRR4302542.4271704/94‑1 (MQ=60)
TCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCG < SRR4302542.5954029/94‑1 (MQ=60)
CAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGC > SRR4302542.204852/1‑94 (MQ=60)
CAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGC < SRR4302542.3595421/94‑1 (MQ=60)
AGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCG > SRR4302542.1282260/1‑94 (MQ=60)
AGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCG > SRR4302542.3065257/1‑94 (MQ=60)
AGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCG < SRR4302542.2268138/94‑1 (MQ=60)
AGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCG < SRR4302542.7128152/94‑1 (MQ=60)
AGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCG > SRR4302542.7007664/1‑94 (MQ=60)
GAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGC > SRR4302542.4612026/1‑94 (MQ=60)
AAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCT > SRR4302542.1536615/1‑94 (MQ=60)
AAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCT < SRR4302542.2010274/94‑1 (MQ=60)
AGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTG > SRR4302542.3144627/1‑94 (MQ=60)
AGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAA > SRR4302542.6655129/1‑94 (MQ=60)
GACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAAT > SRR4302542.183274/1‑94 (MQ=60)
GACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAAT > SRR4302542.5630011/1‑94 (MQ=60)
ACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATG < SRR4302542.1772628/94‑1 (MQ=60)
CGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGA > SRR4302542.1395809/1‑94 (MQ=60)
GACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGAC > SRR4302542.4591973/1‑94 (MQ=60)
CGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTG > SRR4302542.6404491/1‑94 (MQ=60)
GATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGA > SRR4302542.2792232/1‑94 (MQ=60)
GATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGA > SRR4302542.600345/1‑94 (MQ=60)
ATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTAGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGAT < SRR4302542.5460484/94‑1 (MQ=60)
TGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATT < SRR4302542.4584404/94‑1 (MQ=60)
GACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTC < SRR4302542.616298/94‑1 (MQ=60)
ACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCG > SRR4302542.3767964/1‑94 (MQ=60)
ACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCG > SRR4302542.4105005/1‑94 (MQ=60)
CGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGG > SRR4302542.6855740/1‑94 (MQ=60)
CGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGG > SRR4302542.1599554/1‑94 (MQ=60)
CGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGG < SRR4302542.2854602/94‑1 (MQ=60)
GGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGT > SRR4302542.3242368/1‑94 (MQ=60)
GTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTT > SRR4302542.2682710/1‑94 (MQ=60)
GTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTT < SRR4302542.3040126/94‑1 (MQ=60)
GTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTT > SRR4302542.1288619/1‑94 (MQ=60)
TATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTT > SRR4302542.2038712/1‑94 (MQ=60)
TATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTT > SRR4302542.5938571/1‑94 (MQ=60)
CATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTT < SRR4302542.2784250/94‑1 (MQ=60)
ATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTA < SRR4302542.1049726/94‑1 (MQ=60)
ATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTA > SRR4302542.1919468/1‑94 (MQ=60)
ATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGGTTCGGTTTA > SRR4302542.4073973/1‑94 (MQ=60)
TCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTAC < SRR4302542.3107789/94‑1 (MQ=60)
CTTTAAACCACGGTGACGCTTTGATTTTTTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACC > SRR4302542.789900/1‑94 (MQ=60)
CTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACC < SRR4302542.5740570/94‑1 (MQ=60)
CTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACC < SRR4302542.1124520/94‑1 (MQ=60)
CTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACC < SRR4302542.1780689/94‑1 (MQ=60)
TTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCG > SRR4302542.5221290/1‑94 (MQ=60)
TTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCG < SRR4302542.7216639/94‑1 (MQ=60)
TTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCG > SRR4302542.6317146/1‑94 (MQ=60)
TTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCG < SRR4302542.3975268/94‑1 (MQ=60)
TTAAACCCCGGTGACGCTTTGATTTTGTTTATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGT < SRR4302542.4559194/94‑1 (MQ=60)
TTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGT > SRR4302542.5641425/1‑94 (MQ=60)
TTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCCGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGT < SRR4302542.3746320/94‑1 (MQ=60)
TAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTC < SRR4302542.4793676/94‑1 (MQ=60)
AAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCA < SRR4302542.3038232/94‑1 (MQ=60)
AAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCA < SRR4302542.6981991/94‑1 (MQ=60)
AACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAA < SRR4302542.3919967/94‑1 (MQ=60)
AACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAA > SRR4302542.2521736/1‑94 (MQ=60)
AACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAA > SRR4302542.3155449/1‑94 (MQ=60)
CCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAA > SRR4302542.3845854/1‑94 (MQ=60)
CCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAA < SRR4302542.5154744/94‑1 (MQ=60)
CACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAAT < SRR4302542.6249719/94‑1 (MQ=60)
CGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCA > SRR4302542.3182483/1‑94 (MQ=60)
CGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCA < SRR4302542.6437168/94‑1 (MQ=60)
GGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCAT < SRR4302542.6386347/94‑1 (MQ=60)
TGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAT < SRR4302542.161967/94‑1 (MQ=60)
TGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATAT > SRR4302542.1907923/1‑94 (MQ=60)
GACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATT < SRR4302542.7348963/94‑1 (MQ=60)
GACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATT < SRR4302542.1360061/94‑1 (MQ=60)
GACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATT > SRR4302542.6568455/1‑94 (MQ=60)
ACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTT < SRR4302542.2253094/94‑1 (MQ=60)
ACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTT < SRR4302542.357183/94‑1 (MQ=60)
ACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTT < SRR4302542.2906466/94‑1 (MQ=60)
CGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTT < SRR4302542.2652846/94‑1 (MQ=60)
GCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTT > SRR4302542.6091563/1‑94 (MQ=60)
GCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTT < SRR4302542.4367499/94‑1 (MQ=60)
GCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTT > SRR4302542.3590623/1‑94 (MQ=60)
GCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTT > SRR4302542.6345353/1‑94 (MQ=60)
GCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTT > SRR4302542.1266250/1‑94 (MQ=60)
CTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTT < SRR4302542.362180/94‑1 (MQ=60)
CTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTT < SRR4302542.6106820/94‑1 (MQ=60)
CTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTT > SRR4302542.820054/1‑94 (MQ=60)
CTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTT > SRR4302542.929717/1‑94 (MQ=60)
CTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTT < SRR4302542.1801063/94‑1 (MQ=60)
CTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTT > SRR4302542.4459974/1‑94 (MQ=60)
CTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTT < SRR4302542.5050431/94‑1 (MQ=60)
TTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTG < SRR4302542.2486887/94‑1 (MQ=60)
TTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTG < SRR4302542.1459496/94‑1 (MQ=60)
TTTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTG < SRR4302542.5532819/94‑1 (MQ=60)
TTGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGC < SRR4302542.2512145/94‑1 (MQ=60)
TGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCG < SRR4302542.7103344/94‑1 (MQ=60)
TGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCG > SRR4302542.5507812/1‑94 (MQ=60)
TGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCG < SRR4302542.2735930/94‑1 (MQ=60)
TGATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCG < SRR4302542.6327230/94‑1 (MQ=60)
GATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGG < SRR4302542.6585646/94‑1 (MQ=60)
GATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGG < SRR4302542.3404930/94‑1 (MQ=60)
GATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGG < SRR4302542.2057695/94‑1 (MQ=60)
GATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGG < SRR4302542.3404929/94‑1 (MQ=60)
GATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGG < SRR4302542.6347406/94‑1 (MQ=60)
ATTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGT > SRR4302542.3837608/1‑94 (MQ=60)
TTTTGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTT < SRR4302542.6427693/94‑1 (MQ=60)
TTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTA > SRR4302542.5254396/1‑94 (MQ=60)
TGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACA < SRR4302542.6683845/94‑1 (MQ=60)
TGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACA > SRR4302542.1623470/1‑94 (MQ=60)
TGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACA < SRR4302542.6003524/94‑1 (MQ=60)
TGTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACA > SRR4302542.1226800/1‑94 (MQ=60)
GTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAG < SRR4302542.2783847/94‑1 (MQ=60)
GTTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAG < SRR4302542.4122853/94‑1 (MQ=60)
TTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAGTGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGG < SRR4302542.7258813/94‑1 (MQ=60)
TTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGG < SRR4302542.1508686/94‑1 (MQ=60)
TTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGG < SRR4302542.3424883/94‑1 (MQ=60)
TTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGG < SRR4302542.6395647/94‑1 (MQ=60)
TTGATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGG < SRR4302542.4839818/94‑1 (MQ=60)
GATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTA < SRR4302542.5554053/94‑1 (MQ=60)
ATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTAC > SRR4302542.2448091/1‑94 (MQ=60)
ATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTAC < SRR4302542.5520629/94‑1 (MQ=60)
ATAAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTAC > SRR4302542.5243919/1‑94 (MQ=60)
AAACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGA > SRR4302542.2532010/1‑94 (MQ=60)
AACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGGCTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAG < SRR4302542.3473884/94‑1 (MQ=60)
AACGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTCCGAG < SRR4302542.7573156/94‑1 (MQ=60)
CGTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAG > SRR4302542.3884004/1‑94 (MQ=60)
GTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGA > SRR4302542.4033039/1‑94 (MQ=60)
GTCGCGATGTTCTCCCGGCTGTAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGGTACAGGGACGAGAGA > SRR4302542.2394146/1‑94 (MQ=60)
GTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGA < SRR4302542.73151/94‑1 (MQ=60)
GTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGA > SRR4302542.998117/1‑94 (MQ=60)
GTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGA > SRR4302542.3930332/1‑94 (MQ=60)
GTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGA < SRR4302542.307375/94‑1 (MQ=60)
GTCGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGA > SRR4302542.4879424/1‑94 (MQ=60)
GTCGCGATGTTCTCCCGGCTGAAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGA > SRR4302542.5354976/1‑94 (MQ=60)
TCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGAT < SRR4302542.4616110/94‑1 (MQ=60)
TCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGAT < SRR4302542.7181370/94‑1 (MQ=60)
CGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATA < SRR4302542.6163615/94‑1 (MQ=60)
CGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATA > SRR4302542.4244860/1‑94 (MQ=60)
CGCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATA > SRR4302542.532537/1‑94 (MQ=60)
GCGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAA > SRR4302542.1292197/1‑94 (MQ=60)
CGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAA > SRR4302542.69268/1‑94 (MQ=60)
CGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAA < SRR4302542.6433868/94‑1 (MQ=60)
CGATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAA < SRR4302542.951212/94‑1 (MQ=60)
GATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAA > SRR4302542.4319285/1‑94 (MQ=60)
GATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAA > SRR4302542.1351171/1‑94 (MQ=60)
GATGTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAA > SRR4302542.357079/1‑94 (MQ=60)
GTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCA > SRR4302542.4750794/1‑94 (MQ=60)
GTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCA < SRR4302542.2071051/94‑1 (MQ=60)
GTTCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCA > SRR4302542.3926064/1‑94 (MQ=60)
TCTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATC < SRR4302542.5763589/94‑1 (MQ=60)
CTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCC > SRR4302542.1489859/1‑94 (MQ=60)
CTCCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCC < SRR4302542.2325471/94‑1 (MQ=60)
CCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGG > SRR4302542.2395499/1‑94 (MQ=60)
CCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGG > SRR4302542.5680426/1‑94 (MQ=60)
CCCGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGG < SRR4302542.6556940/94‑1 (MQ=60)
CTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGG < SRR4302542.153070/94‑1 (MQ=60)
CGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGT < SRR4302542.7143593/94‑1 (MQ=60)
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TTCATCGCTAAATGGTCAGAAGAGACGACGATGACGGTATCTTTAAACCACGGTGACGCTTTGATTTTGTTGATAAACGTCGCGATGTTCTCCTGGCTGCAACTTACCGCGCTGAATGACTGATTCGGTTTACCGTCAAAATCATATTTTTTGCGGTTACAGGTACGAGAGATAAAACCATCCGGGT > NC_000913/4595815‑4596001
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
