Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCAGCGGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCAACGG > NC_000913/3500005‑3500191
|
ACCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGT > SRR4302542.126210/1‑94 (MQ=60)
CCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTG > SRR4302542.2312516/1‑94 (MQ=60)
CCAGCAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTG > SRR4302542.7258635/1‑94 (MQ=60)
CGGCTGCCCATTGAACACGCATTTCGTGCGGCAACCGAGCTGGGTTACGACGGCCTCGAAATTTGGGGCGGTCGCCCGCACGCGGTCGCGCCGG > SRR4302542.4495319/1‑94 (MQ=60)
CAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGGCCGCACGCGTTCGCGCCGG > SRR4302542.2970999/1‑94 (MQ=60)
CAGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGG < SRR4302542.2064515/94‑1 (MQ=60)
AGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGA > SRR4302542.5002997/1‑94 (MQ=60)
GCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGAC > SRR4302542.1139675/1‑94 (MQ=60)
GCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGAC > SRR4302542.6342339/1‑94 (MQ=60)
CTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACT < SRR4302542.3470529/94‑1 (MQ=60)
CTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACT > SRR4302542.2386923/1‑94 (MQ=60)
TGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTT > SRR4302542.5803297/1‑94 (MQ=60)
TGCCGATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTT > SRR4302542.7045274/1‑94 (MQ=60)
GCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTA > SRR4302542.3787462/1‑94 (MQ=60)
CCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAA > SRR4302542.1109863/1‑94 (MQ=60)
CCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAA > SRR4302542.3310450/1‑94 (MQ=60)
CCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAA > SRR4302542.1755178/1‑94 (MQ=60)
CCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAA > SRR4302542.2006163/1‑94 (MQ=60)
CCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAA < SRR4302542.6542554/94‑1 (MQ=60)
CTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAA > SRR4302542.7496619/1‑94 (MQ=60)
CTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAA < SRR4302542.4200307/94‑1 (MQ=60)
CTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAA > SRR4302542.4215724/1‑94 (MQ=60)
CTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAA > SRR4302542.3245302/1‑94 (MQ=60)
TATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAA < SRR4302542.5360929/94‑1 (MQ=60)
TATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAA > SRR4302542.4514015/1‑94 (MQ=60)
TATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAA < SRR4302542.1610374/94‑1 (MQ=60)
TATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAACTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAA < SRR4302542.7588741/94‑1 (MQ=60)
ATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAG > SRR4302542.2264112/1‑94 (MQ=60)
ATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAG > SRR4302542.994797/1‑94 (MQ=60)
TTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGC < SRR4302542.5773112/94‑1 (MQ=60)
TGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCG < SRR4302542.1208975/94‑1 (MQ=60)
TGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCG > SRR4302542.1555470/1‑94 (MQ=60)
GAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGG > SRR4302542.5323308/1‑94 (MQ=60)
GAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGG < SRR4302542.6698957/94‑1 (MQ=60)
GAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGG < SRR4302542.2698979/94‑1 (MQ=60)
AACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGG > SRR4302542.567046/1‑94 (MQ=60)
AACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGG < SRR4302542.749156/94‑1 (MQ=60)
AACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGG < SRR4302542.5377990/94‑1 (MQ=60)
ACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGC < SRR4302542.704522/94‑1 (MQ=60)
ACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGC < SRR4302542.3804888/94‑1 (MQ=60)
ACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGC > SRR4302542.5195120/1‑94 (MQ=60)
CACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCG < SRR4302542.5150222/94‑1 (MQ=60)
CACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCG < SRR4302542.7224482/94‑1 (MQ=60)
CACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCG < SRR4302542.2136963/94‑1 (MQ=60)
CACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCG > SRR4302542.7225472/1‑94 (MQ=60)
CACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCG < SRR4302542.5955186/94‑1 (MQ=60)
CACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCG < SRR4302542.161985/94‑1 (MQ=60)
CACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGC‑GGCGG > SRR4302542.2551583/1‑94 (MQ=60)
GCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCA < SRR4302542.5823866/94‑1 (MQ=60)
GCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCA > SRR4302542.5596360/1‑94 (MQ=60)
ATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATC > SRR4302542.5844974/1‑94 (MQ=60)
ATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATC > SRR4302542.1501097/1‑94 (MQ=60)
TTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCA > SRR4302542.5090989/1‑94 (MQ=60)
TTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAA > SRR4302542.5889272/1‑94 (MQ=60)
CGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAAC > SRR4302542.6254457/1‑94 (MQ=60)
GTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACA < SRR4302542.946430/94‑1 (MQ=60)
GTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACA < SRR4302542.2052933/94‑1 (MQ=60)
GTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACA > SRR4302542.5474477/1‑94 (MQ=60)
TGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAA > SRR4302542.2963231/1‑94 (MQ=60)
GATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAA < SRR4302542.4555427/94‑1 (MQ=60)
GATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAA < SRR4302542.4585571/94‑1 (MQ=60)
ATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAAT > SRR4302542.1675670/1‑94 (MQ=60)
ATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAAT > SRR4302542.318129/1‑94 (MQ=60)
ATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAAT > SRR4302542.1996935/1‑94 (MQ=60)
ATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAAT > SRR4302542.458929/1‑94 (MQ=60)
ATGCAAGCGAGCTGAGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAAT < SRR4302542.5905420/94‑1 (MQ=60)
TGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATC > SRR4302542.5874931/1‑94 (MQ=60)
TGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATC < SRR4302542.6040768/94‑1 (MQ=60)
GCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCA < SRR4302542.1708020/94‑1 (MQ=60)
AAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAG > SRR4302542.5774235/1‑94 (MQ=60)
AAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAG < SRR4302542.6055826/94‑1 (MQ=60)
AAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAG < SRR4302542.5526652/94‑1 (MQ=60)
AAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAG < SRR4302542.3740781/94‑1 (MQ=60)
AGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGG < SRR4302542.5814497/94‑1 (MQ=60)
AGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGG < SRR4302542.2494857/94‑1 (MQ=60)
GCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGC < SRR4302542.1074373/94‑1 (MQ=60)
CGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCG < SRR4302542.4493050/94‑1 (MQ=60)
CGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCG < SRR4302542.1707033/94‑1 (MQ=60)
CGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCG < SRR4302542.5112240/94‑1 (MQ=60)
GAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGC > SRR4302542.161319/1‑94 (MQ=60)
GAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGC < SRR4302542.1681098/94‑1 (MQ=60)
AGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCT < SRR4302542.2055384/94‑1 (MQ=60)
AGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCT < SRR4302542.3225636/94‑1 (MQ=60)
GCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTG < SRR4302542.4236189/94‑1 (MQ=60)
GCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTG < SRR4302542.5205268/94‑1 (MQ=60)
GCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTG < SRR4302542.5429684/94‑1 (MQ=60)
CTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGG < SRR4302542.414714/94‑1 (MQ=60)
TGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGC > SRR4302542.6232004/1‑94 (MQ=60)
TGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGC > SRR4302542.6569650/1‑94 (MQ=60)
GGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCG < SRR4302542.2519228/94‑1 (MQ=60)
GGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCG < SRR4302542.1658925/94‑1 (MQ=60)
GGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGC > SRR4302542.95527/1‑94 (MQ=60)
TACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGA > SRR4302542.4565540/1‑94 (MQ=60)
TACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGA > SRR4302542.7146042/1‑94 (MQ=60)
ACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGAC < SRR4302542.2059660/94‑1 (MQ=60)
ACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGAC < SRR4302542.5254193/94‑1 (MQ=60)
ACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGAC < SRR4302542.1622170/94‑1 (MQ=60)
ACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCAGCATCAAACAAATCAAGGCGCTGGCGCAGAC < SRR4302542.6159438/94‑1 (MQ=60)
ACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGAC < SRR4302542.2900219/94‑1 (MQ=60)
ACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGAC < SRR4302542.671590/94‑1 (MQ=60)
CGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACG < SRR4302542.6515324/94‑1 (MQ=60)
CGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACG > SRR4302542.1402523/1‑94 (MQ=60)
CGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACG < SRR4302542.4025172/94‑1 (MQ=60)
GACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGT > SRR4302542.4416193/1‑94 (MQ=60)
ACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTA < SRR4302542.509516/94‑1 (MQ=60)
CGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTAT < SRR4302542.1577606/94‑1 (MQ=60)
CGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTAT < SRR4302542.4874899/94‑1 (MQ=60)
GGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATC > SRR4302542.6463181/1‑94 (MQ=60)
CATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAG < SRR4302542.4377622/94‑1 (MQ=60)
CATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAG > SRR4302542.4764840/1‑94 (MQ=60)
CATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAG > SRR4302542.1568195/1‑94 (MQ=60)
ATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGA > SRR4302542.6062052/1‑94 (MQ=60)
ATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGA > SRR4302542.5624624/1‑94 (MQ=60)
TCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGAT < SRR4302542.6522975/94‑1 (MQ=60)
TCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGAT < SRR4302542.3255715/94‑1 (MQ=60)
TCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGAT < SRR4302542.1995592/94‑1 (MQ=60)
TCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGAT < SRR4302542.2077966/94‑1 (MQ=60)
CGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATG < SRR4302542.1610471/94‑1 (MQ=60)
CGAAATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATG < SRR4302542.6687350/94‑1 (MQ=60)
GAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGC < SRR4302542.5732169/94‑1 (MQ=60)
GAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGC < SRR4302542.7009125/94‑1 (MQ=60)
AATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCG < SRR4302542.7589597/94‑1 (MQ=60)
ATTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGA > SRR4302542.3613515/1‑94 (MQ=60)
TTTGGGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGAT < SRR4302542.3539089/94‑1 (MQ=60)
TTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGAT > SRR4302542.1460146/1‑94 (MQ=60)
TTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGAT < SRR4302542.5810568/94‑1 (MQ=60)
TTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGAT < SRR4302542.3492353/94‑1 (MQ=60)
TGGGGCGGTCGCCCGCACGCGTTCGTGCCCGGCTTAAAAGCGGGCGGCCTCAAACAAATCAAGGCGCTGGCGCCGACGGATTAGATGGCGGTTA > SRR4302542.3705375/1‑94 (MQ=60)
GGGGCGGTCGCCCGCACTGGTTCGTGCGGGACTTAAAACCGGGCGGCATCAAACAAATCAGGGCGCGGGGGCGGACGTATCAGATGCCGATTAT < SRR4302542.6240173/94‑1 (MQ=53)
GGGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATC > SRR4302542.7185449/1‑94 (MQ=60)
GGCGGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCG < SRR4302542.6495938/94‑1 (MQ=60)
GGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCT < SRR4302542.3274744/94‑1 (MQ=60)
GGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCT > SRR4302542.6871059/1‑94 (MQ=60)
GGTCGCCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCT > SRR4302542.6179040/1‑94 (MQ=60)
CGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATA > SRR4302542.5491100/1‑94 (MQ=60)
GCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATAC < SRR4302542.4451729/94‑1 (MQ=60)
GCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATAC < SRR4302542.5839656/94‑1 (MQ=60)
NNCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACG < SRR4302542.339922/94‑1 (MQ=60)
CCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACG > SRR4302542.4074141/1‑94 (MQ=60)
CCCGCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACG < SRR4302542.2950030/94‑1 (MQ=60)
CCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACG < SRR4302542.5653894/94‑1 (MQ=60)
GCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCA > SRR4302542.6070116/1‑94 (MQ=60)
GCACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCA < SRR4302542.2190152/94‑1 (MQ=60)
GCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCA > SRR4302542.2480897/1‑94 (MQ=60)
CACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACCCCAG < SRR4302542.7045184/94‑1 (MQ=60)
ACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGA > SRR4302542.2582828/1‑94 (MQ=60)
ACGCGTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGA > SRR4302542.5231163/1‑94 (MQ=60)
ACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGA > SRR4302542.5811624/1‑94 (MQ=60)
CGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAA > SRR4302542.5228560/1‑94 (MQ=60)
CGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAAC < SRR4302542.1758420/94‑1 (MQ=60)
CGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAAC < SRR4302542.4923335/94‑1 (MQ=60)
GTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACC > SRR4302542.1941443/1‑94 (MQ=60)
GTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACC > SRR4302542.7172827/1‑94 (MQ=60)
GTTCGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACC < SRR4302542.3684094/94‑1 (MQ=60)
TTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCA < SRR4302542.7371777/94‑1 (MQ=60)
TTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCA > SRR4302542.143880/1‑94 (MQ=60)
CGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCAAC > SRR4302542.2028783/1‑94 (MQ=60)
CGTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCAAC > SRR4302542.5519467/1‑94 (MQ=60)
CGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTCTACGCCAGAAACCAAC > SRR4302542.7185643/1‑94 (MQ=60)
CGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCAAC < SRR4302542.7109442/94‑1 (MQ=60)
GTGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCAACG < SRR4302542.1448525/94‑1 (MQ=60)
GCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCAACG > SRR4302542.5415159/1‑94 (MQ=60)
GCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCAACG < SRR4302542.2567313/94‑1 (MQ=60)
GCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCAACG < SRR4302542.7041539/94‑1 (MQ=60)
TGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCAACGG < SRR4302542.2555298/94‑1 (MQ=60)
CGCTGGACTTAAAAGCGGGCGACATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCAACGG < SRR4302542.4311187/94‑1 (MQ=60)
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ACCAGCGGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCAACGG > NC_000913/3500005‑3500191
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
