Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1061 |
294.1 |
15065038 |
98.6% |
14854127 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCA > NC_000913/3778383‑3778568
|
TAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGG > SRR4302542.6528281/1‑94 (MQ=60)
TAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGG < SRR4302542.1124986/94‑1 (MQ=60)
TAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAG < SRR4302542.5539488/94‑1 (MQ=60)
AACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGG < SRR4302542.3071467/94‑1 (MQ=60)
AACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGG > SRR4302542.3575740/1‑94 (MQ=60)
AACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGG > SRR4302542.4084251/1‑94 (MQ=60)
AACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGG > SRR4302542.2041465/1‑94 (MQ=60)
AACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGG > SRR4302542.1298478/1‑94 (MQ=60)
AACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGG < SRR4302542.2487136/94‑1 (MQ=60)
ACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGC < SRR4302542.6573384/94‑1 (MQ=60)
ACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGC > SRR4302542.4509613/1‑94 (MQ=60)
CGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCG < SRR4302542.5053282/94‑1 (MQ=60)
GGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGG > SRR4302542.3640773/1‑94 (MQ=60)
GGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGG < SRR4302542.2305680/94‑1 (MQ=60)
GGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGG > SRR4302542.6979838/1‑94 (MQ=60)
GGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGG > SRR4302542.611227/1‑94 (MQ=60)
GCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGT > SRR4302542.4943813/1‑94 (MQ=60)
GCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGT < SRR4302542.7601445/94‑1 (MQ=60)
CTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTG < SRR4302542.1641299/94‑1 (MQ=60)
TTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGT > SRR4302542.5526800/1‑94 (MQ=60)
TTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGT < SRR4302542.3050928/94‑1 (MQ=60)
GATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAG < SRR4302542.1079434/94‑1 (MQ=60)
GATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAG < SRR4302542.6887134/94‑1 (MQ=60)
GATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAG > SRR4302542.2273201/1‑94 (MQ=60)
GATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAG < SRR4302542.4393771/94‑1 (MQ=60)
ATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGC > SRR4302542.1741514/1‑94 (MQ=60)
ATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGC > SRR4302542.6351632/1‑94 (MQ=60)
ATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGC > SRR4302542.1305255/1‑94 (MQ=60)
ATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGC > SRR4302542.430942/1‑94 (MQ=60)
ATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGTAGC > SRR4302542.5056307/1‑94 (MQ=60)
GTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTA > SRR4302542.84132/1‑94 (MQ=60)
TCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAA < SRR4302542.349918/94‑1 (MQ=60)
GTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACC < SRR4302542.5134830/94‑1 (MQ=60)
GTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACC < SRR4302542.6191658/94‑1 (MQ=60)
GTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGTAGCTAACC > SRR4302542.4051148/1‑94 (MQ=60)
TGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCT < SRR4302542.6819639/94‑1 (MQ=60)
TGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCT > SRR4302542.6982571/1‑94 (MQ=60)
TGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCT > SRR4302542.4563928/1‑94 (MQ=60)
TGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCT < SRR4302542.6468315/94‑1 (MQ=60)
GCGTATGATTGCGCTCGGTTCCGACACCGTACTGCTGGGTTGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCTAGGCGGGTGTAGCTAGCCTG < SRR4302542.6176061/94‑1 (MQ=60)
GCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTG < SRR4302542.2528548/94‑1 (MQ=60)
GTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCT < SRR4302542.4880166/94‑1 (MQ=60)
GTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCT > SRR4302542.4902402/1‑94 (MQ=60)
GTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCT > SRR4302542.6200733/1‑94 (MQ=60)
TATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTA < SRR4302542.6218530/94‑1 (MQ=60)
ATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAA > SRR4302542.3538869/1‑94 (MQ=60)
TGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAA > SRR4302542.7071739/1‑94 (MQ=60)
GATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGTAGCTAACCTGCTAAAT > SRR4302542.674070/1‑94 (MQ=60)
TTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCT < SRR4302542.4914967/94‑1 (MQ=60)
TTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCT < SRR4302542.5596955/94‑1 (MQ=60)
TTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCT < SRR4302542.950364/94‑1 (MQ=60)
TGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTG < SRR4302542.3386466/94‑1 (MQ=60)
TGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTG > SRR4302542.3104763/1‑94 (MQ=60)
TGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTG < SRR4302542.2042256/94‑1 (MQ=60)
CGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGAT > SRR4302542.4857743/1‑94 (MQ=60)
CGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGAT > SRR4302542.2771542/1‑94 (MQ=60)
CGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGAT < SRR4302542.7262734/94‑1 (MQ=60)
GCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATC < SRR4302542.1108747/94‑1 (MQ=60)
GCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATC < SRR4302542.7504260/94‑1 (MQ=60)
GCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATC > SRR4302542.3666010/1‑94 (MQ=60)
GCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATC < SRR4302542.2995481/94‑1 (MQ=60)
GCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATC < SRR4302542.1526577/94‑1 (MQ=60)
GCTCGGTCCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATC < SRR4302542.5117727/94‑1 (MQ=60)
GGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAA > SRR4302542.1928847/1‑94 (MQ=60)
GTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAA < SRR4302542.2907635/94‑1 (MQ=60)
GTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAA < SRR4302542.774241/94‑1 (MQ=60)
TGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAA < SRR4302542.2599021/94‑1 (MQ=60)
TGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAA < SRR4302542.2682078/94‑1 (MQ=60)
GCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAG < SRR4302542.1087006/94‑1 (MQ=60)
CGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAG < SRR4302542.5220869/94‑1 (MQ=60)
CGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAG < SRR4302542.2328938/94‑1 (MQ=60)
CGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAG < SRR4302542.1487469/94‑1 (MQ=60)
GACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGA > SRR4302542.6966821/1‑94 (MQ=60)
GACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGA > SRR4302542.5780573/1‑94 (MQ=60)
ACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGAT < SRR4302542.414598/94‑1 (MQ=60)
ACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGAT < SRR4302542.4355965/94‑1 (MQ=60)
CACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATG < SRR4302542.1375034/94‑1 (MQ=60)
CACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATG > SRR4302542.1041123/1‑94 (MQ=60)
CACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATG < SRR4302542.2475091/94‑1 (MQ=60)
CACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATG < SRR4302542.3310244/94‑1 (MQ=60)
ACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGA > SRR4302542.663636/1‑94 (MQ=60)
ACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGGGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGA > SRR4302542.4018472/1‑94 (MQ=60)
CCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAA < SRR4302542.3829919/94‑1 (MQ=60)
CCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAA < SRR4302542.1349215/94‑1 (MQ=60)
GTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAG > SRR4302542.5590304/1‑94 (MQ=60)
GTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAG > SRR4302542.3139632/1‑94 (MQ=60)
TACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGT < SRR4302542.3967473/94‑1 (MQ=60)
ACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTG < SRR4302542.713252/94‑1 (MQ=60)
ACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTG < SRR4302542.5023456/94‑1 (MQ=60)
ACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTG > SRR4302542.5841211/1‑94 (MQ=60)
ACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTG > SRR4302542.4739372/1‑94 (MQ=60)
ACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTG > SRR4302542.226713/1‑94 (MQ=60)
ACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTG < SRR4302542.2488704/94‑1 (MQ=60)
CTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGG < SRR4302542.5697382/94‑1 (MQ=60)
CTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGG < SRR4302542.6072642/94‑1 (MQ=60)
CTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGG > SRR4302542.2512495/1‑94 (MQ=60)
TGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGC < SRR4302542.5551785/94‑1 (MQ=60)
TGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGC < SRR4302542.4730896/94‑1 (MQ=60)
CGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGC < SRR4302542.6868976/94‑1 (MQ=60)
GCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCG < SRR4302542.7160191/94‑1 (MQ=60)
CTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGA > SRR4302542.3425494/1‑94 (MQ=60)
TGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGAT < SRR4302542.5072623/94‑1 (MQ=60)
TGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGAT > SRR4302542.2058400/1‑94 (MQ=60)
TGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGAT < SRR4302542.2647245/94‑1 (MQ=60)
TGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGAT < SRR4302542.3323720/94‑1 (MQ=60)
TGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGAT < SRR4302542.2171612/94‑1 (MQ=60)
GGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG < SRR4302542.1348532/94‑1 (MQ=60)
GGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATG > SRR4302542.6040280/1‑94 (MQ=60)
GGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGA > SRR4302542.7351946/1‑94 (MQ=60)
GGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGA < SRR4302542.5387337/94‑1 (MQ=60)
GTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGAC > SRR4302542.7315898/1‑94 (MQ=60)
GTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGAC < SRR4302542.663988/94‑1 (MQ=60)
GTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGAC < SRR4302542.5418579/94‑1 (MQ=60)
CGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGC > SRR4302542.4825266/1‑94 (MQ=60)
GTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCT < SRR4302542.2582391/94‑1 (MQ=60)
GTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCT < SRR4302542.6444648/94‑1 (MQ=60)
TGCTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTG < SRR4302542.4930605/94‑1 (MQ=60)
CTTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGAC < SRR4302542.5710308/94‑1 (MQ=60)
TTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACT < SRR4302542.1316811/94‑1 (MQ=60)
TTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACT > SRR4302542.5572056/1‑94 (MQ=60)
TTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACT < SRR4302542.5210459/94‑1 (MQ=60)
TTTCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACT < SRR4302542.5595061/94‑1 (MQ=60)
TTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACT < SRR4302542.6576583/94‑1 (MQ=60)
TCTTGTATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGG > SRR4302542.646504/1‑94 (MQ=60)
TTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCG < SRR4302542.7345103/94‑1 (MQ=60)
TATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGA > SRR4302542.2085749/1‑94 (MQ=60)
ATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAA < SRR4302542.2288762/94‑1 (MQ=60)
ATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAA < SRR4302542.5807796/94‑1 (MQ=60)
ATGCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAA > SRR4302542.4397732/1‑94 (MQ=60)
ATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAA > SRR4302542.2684648/1‑94 (MQ=60)
GCGCTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAAT < SRR4302542.1894266/94‑1 (MQ=60)
CGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATC < SRR4302542.4439827/94‑1 (MQ=60)
GCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCG > SRR4302542.4569090/1‑94 (MQ=60)
CTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGA > SRR4302542.3478870/1‑94 (MQ=60)
CTGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGA > SRR4302542.7012517/1‑94 (MQ=60)
TGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGAT < SRR4302542.6843411/94‑1 (MQ=60)
TGGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGAT < SRR4302542.6725166/94‑1 (MQ=60)
GGCAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATC > SRR4302542.3801437/1‑94 (MQ=60)
CAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAG < SRR4302542.5677796/94‑1 (MQ=60)
CAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAG > SRR4302542.6390668/1‑94 (MQ=60)
CAACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAG < SRR4302542.3529017/94‑1 (MQ=60)
CAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAG < SRR4302542.1059199/94‑1 (MQ=60)
CAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAG > SRR4302542.835067/1‑94 (MQ=60)
AACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGC > SRR4302542.1142923/1‑94 (MQ=60)
AACAGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGC < SRR4302542.3559449/94‑1 (MQ=60)
ACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGGAATCGATCAGCC > SRR4302542.6237821/1‑94 (MQ=60)
AGCGGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAA > SRR4302542.3387323/1‑94 (MQ=60)
GGGCCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATT > SRR4302542.5999553/1‑94 (MQ=60)
CCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACG < SRR4302542.1980716/94‑1 (MQ=60)
CCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACG < SRR4302542.6447293/94‑1 (MQ=60)
CCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACG < SRR4302542.1741231/94‑1 (MQ=60)
CCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACG > SRR4302542.7548803/1‑94 (MQ=60)
CCGGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACG < SRR4302542.5512849/94‑1 (MQ=60)
GGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCA > SRR4302542.3925262/1‑94 (MQ=60)
GGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCA > SRR4302542.4947206/1‑94 (MQ=60)
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TAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCA > NC_000913/3778383‑3778568
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
