Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 245 579.6 28867798 97.7% 28203838 96.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTT‑‑‑‑‑‑‑‑CC‑‑GCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT  >  NC_000913/4474751‑4474921
                                                                                                                   |                                                                            
AAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTN‑‑‑‑‑‑‑‑NN                                                                              >  SRR4302518.14783821/1‑101 (MQ=60)
                                              NNNGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCG                                     <  SRR4302518.8959334/101‑1 (MQ=36)
                                              GGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCG                                     <  SRR4302518.1257440/101‑1 (MQ=41)
                                              GGTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCG                                     <  SRR4302518.3500798/101‑1 (MQ=41)
                                               GTGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGC                                    <  SRR4302518.4447401/101‑1 (MQ=39)
                                                TGGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCG                                   <  SRR4302518.5388823/101‑1 (MQ=37)
                                                NNNAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCG                                   <  SRR4302518.12636057/101‑1 (MQ=32)
                                                 GGAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGA                                  >  SRR4302518.3683053/1‑101 (MQ=36)
                                                  GAAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGAC                                 >  SRR4302518.4114085/1‑101 (MQ=34)
                                                   AAGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACC                                >  SRR4302518.5902250/1‑101 (MQ=34)
                                                    AGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCA                               <  SRR4302518.2972078/101‑1 (MQ=34)
                                                    AGAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCA                               >  SRR4302518.3221910/1‑101 (MQ=34)
                                                     NNNTAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCGT                              <  SRR4302518.11332939/101‑1 (MQ=25)
                                                     NNNTAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCCT                              <  SRR4302518.14799598/101‑1 (MQ=25)
                                                     GAATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCAT                              <  SRR4302518.3271193/101‑1 (MQ=34)
                                                      NNNAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATC                             <  SRR4302518.8919347/101‑1 (MQ=28)
                                                      AATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATC                             <  SRR4302518.1553487/101‑1 (MQ=34)
                                                       ATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCA                            <  SRR4302518.5212184/101‑1 (MQ=34)
                                                       ATAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCA                            >  SRR4302518.3403909/1‑101 (MQ=34)
                                                        TAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCAC                           >  SRR4302518.310348/1‑101 (MQ=34)
                                                        TAGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCAC                           >  SRR4302518.4180177/1‑101 (MQ=34)
                                                         NNNCCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGTGCGTCGCGACCATCATC                          <  SRR4302518.10756794/101‑1 (MQ=17)
                                                         NNNCCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACC                          <  SRR4302518.14755055/101‑1 (MQ=28)
                                                         AGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCNNN                          >  SRR4302518.10951161/1‑101 (MQ=28)
                                                         AGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACC                          >  SRR4302518.1551125/1‑101 (MQ=34)
                                                         AGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACC                          >  SRR4302518.3463482/1‑101 (MQ=34)
                                                         AGACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACC                          <  SRR4302518.3733332/101‑1 (MQ=34)
                                                          NNNCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCA                         <  SRR4302518.11894981/101‑1 (MQ=27)
                                                          GACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCANNN                         >  SRR4302518.9161002/1‑101 (MQ=28)
                                                          GACCTATCACTGCAT‑AAGATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCG                         >  SRR4302518.2328494/1‑101 (MQ=34)
                                                           ACCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACNNN                        >  SRR4302518.9008658/1‑101 (MQ=28)
                                                            CCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCNNN                       >  SRR4302518.12850630/1‑101 (MQ=28)
                                                            CCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCT                       <  SRR4302518.1645563/101‑1 (MQ=34)
                                                            CCTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCACT                       >  SRR4302518.5162219/1‑101 (MQ=28)
                                                            CCTATCACTGCATAAA‑ATAATGTGATGCCGGGAGGGTGTGTATTT‑‑‑‑‑‑‑‑CCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCT                       >  SRR4302518.2073406/1‑101 (MQ=23)
                                                             NNNTCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTT                      <  SRR4302518.14615010/101‑1 (MQ=28)
                                                             CTATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGNNN                      >  SRR4302518.8486207/1‑101 (MQ=28)
                                                              TATCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTT                     <  SRR4302518.4946066/101‑1 (MQ=34)
                                                               NNNACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTG                    <  SRR4302518.9935056/101‑1 (MQ=28)
                                                               NNNACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTG                    <  SRR4302518.14654497/101‑1 (MQ=28)
                                                                TCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGA                   >  SRR4302518.6386539/1‑101 (MQ=34)
                                                                TCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGA                   <  SRR4302518.645947/101‑1 (MQ=34)
                                                                TCACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGA                   >  SRR4302518.762872/1‑101 (MQ=34)
                                                                 nnntncataAA‑ATAATGTGATNCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGAT                  <  SRR4302518.8253212/92‑1 (MQ=31)
                                                                 CACTGCATAAA‑ATAATGTGATGCCGGGATGGGTTGTATTT‑‑‑‑‑‑‑‑CCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACTGCTTTGta                  >  SRR4302518.2571270/1‑99 (MQ=20)
                                                                  nnngcataAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATA                 <  SRR4302518.9394217/93‑1 (MQ=36)
                                                                  agtgcataAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATCATTTACTGAGCGTCGCGACCATCACCGCTTTGNNN                 >  SRR4302518.10771854/9‑101 (MQ=21)
                                                                  aatgcataAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGNNN                 >  SRR4302518.11221147/9‑101 (MQ=30)
                                                                  ACTGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATA                 >  SRR4302518.5619928/1‑101 (MQ=34)
                                                                   nnncataAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCTCCGCTTTGATAG                <  SRR4302518.11370120/94‑1 (MQ=28)
                                                                   nnncataAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAG                <  SRR4302518.14605619/94‑1 (MQ=38)
                                                                    TGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATNNN               >  SRR4302518.7861167/1‑101 (MQ=32)
                                                                    TGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGT               >  SRR4302518.4478047/1‑101 (MQ=37)
                                                                    TGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGT               <  SRR4302518.1997509/101‑1 (MQ=37)
                                                                    TGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGACCGTCGCGACCATCACCGCTTTGATNNN               >  SRR4302518.12175181/1‑101 (MQ=23)
                                                                    TGCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATGATTTACTGAGCGTCGCGACCATCACCGCTTTGATNNN               >  SRR4302518.12876834/1‑101 (MQ=23)
                                                                     GCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTCCTGAGCGTCGCGACCATCACCGCTTTGATANNN              >  SRR4302518.12833322/1‑101 (MQ=25)
                                                                     GCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATANNN              >  SRR4302518.10475821/1‑101 (MQ=34)
                                                                     GCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATANNN              >  SRR4302518.12823606/1‑101 (MQ=34)
                                                                     GCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTA              <  SRR4302518.3378740/101‑1 (MQ=39)
                                                                     GCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTA              <  SRR4302518.4695149/101‑1 (MQ=39)
                                                                     GCATAAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTA              <  SRR4302518.2665287/101‑1 (MQ=39)
                                                                      nnnaAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTAT             <  SRR4302518.14528007/97‑1 (MQ=43)
                                                                      NNN‑AA‑ATAATGTGATGCCGGGATGGTGTGTATTT‑‑‑‑‑‑‑‑CCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATG            <  SRR4302518.12491883/101‑1 (MQ=41)
                                                                       ataAA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATG            <  SRR4302518.5499731/98‑1 (MQ=44)
                                                                       NN‑NA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGC           <  SRR4302518.13810409/101‑1 (MQ=43)
                                                                        A‑AA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTCTTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCA          >  SRR4302518.4493363/1‑101 (MQ=37)
                                                                          NN‑NTAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCTT         <  SRR4302518.12017855/101‑1 (MQ=39)
                                                                          AA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGNNN         >  SRR4302518.10871760/1‑101 (MQ=43)
                                                                          AA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCAT         <  SRR4302518.317160/101‑1 (MQ=49)
                                                                          AA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCAT         <  SRR4302518.3116812/101‑1 (MQ=49)
                                                                           A‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCNNN        >  SRR4302518.13033267/1‑101 (MQ=43)
                                                                           A‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCNNN        >  SRR4302518.8109514/1‑101 (MQ=43)
                                                                           A‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATA        <  SRR4302518.1137218/101‑1 (MQ=49)
                                                                           A‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATA        >  SRR4302518.780479/1‑101 (MQ=49)
                                                                             ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATAC       <  SRR4302518.3129950/101‑1 (MQ=49)
                                                                             ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATAC       <  SRR4302518.6213121/101‑1 (MQ=49)
                                                                             ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCANNN       >  SRR4302518.10178962/1‑101 (MQ=43)
                                                                             ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGCATGCANNN       >  SRR4302518.8966675/1‑101 (MQ=34)
                                                                              TAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGTTAGTATGCATNNN      >  SRR4302518.9911018/1‑101 (MQ=34)
                                                                              TAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACG      <  SRR4302518.7332559/101‑1 (MQ=49)
                                                                              TAATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACG      <  SRR4302518.4116393/101‑1 (MQ=49)
                                                                               AATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGG     >  SRR4302518.5670500/1‑101 (MQ=52)
                                                                                ATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACNNN    >  SRR4302518.13254529/1‑101 (MQ=47)
                                                                                ATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGT    >  SRR4302518.857489/1‑101 (MQ=54)
                                                                                ATGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGT    >  SRR4302518.4808532/1‑101 (MQ=54)
                                                                                 TGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGNNN   >  SRR4302518.14832374/1‑101 (MQ=49)
                                                                                 TGTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTT   <  SRR4302518.5983151/101‑1 (MQ=56)
                                                                                  GTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT  <  SRR4302518.2600930/101‑1 (MQ=58)
                                                                                  GTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT  <  SRR4302518.533779/101‑1 (MQ=58)
                                                                                  GTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGNNN  >  SRR4302518.14757972/1‑101 (MQ=52)
                                                                                  GTGATGCCGGGATGG‑‑‑‑‑‑TTTGTATTTCCCG‑‑GCATCTTTATAGCGATAGCA‑ATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGNNN  >  SRR4302518.11528641/1‑101 (MQ=52)
                                                                                                                   |                                                                            
AAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCAT‑AA‑ATAATGTGATGCCGGGATGG‑‑‑‑‑‑TTT‑‑‑‑‑‑‑‑CC‑‑GCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT  >  NC_000913/4474751‑4474921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑