Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
708,421 |
G→A |
G289S (GGC→AGC) |
ybfM → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 708,421 | 0 | G | A | 100.0%
| 865.0
/ NA
| 220 | G289S (GGC→AGC) | ybfM | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (115/105); total (115/105) |
Only 100 of 223 total aligned reads displayed.
GATATCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACGGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGAC > NC_000913/708331‑708510
|
tCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCg > 2:3974969/1‑93 (MQ=255)
tCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCg > 2:5921591/1‑93 (MQ=255)
tCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCg > 1:18296/1‑93 (MQ=255)
cGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGc > 1:1181709/1‑93 (MQ=255)
gCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGcc < 1:5552616/93‑1 (MQ=255)
gCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGcc < 2:6429170/93‑1 (MQ=255)
ccGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCt > 1:2142033/1‑93 (MQ=255)
ccGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCt < 1:367943/93‑1 (MQ=255)
ccGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCt < 2:4795106/93‑1 (MQ=255)
cGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTg > 1:4604014/1‑93 (MQ=255)
gTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCTCCTGGc < 1:5307838/93‑1 (MQ=255)
ccGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCaa > 2:1661476/1‑93 (MQ=255)
ccGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCaa > 2:4123957/1‑93 (MQ=255)
cGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAg > 2:4228701/1‑93 (MQ=255)
cGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAg < 1:738118/93‑1 (MQ=255)
gTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGc < 1:3421645/93‑1 (MQ=255)
gTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGc > 1:1001067/1‑93 (MQ=255)
tAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGt < 2:1596264/93‑1 (MQ=255)
aaCCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGtt > 1:1544845/1‑93 (MQ=255)
aaCCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGtt > 1:3147308/1‑93 (MQ=255)
accaccAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTg < 1:2834397/93‑1 (MQ=255)
accaGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGAcc > 1:5830841/1‑93 (MQ=255)
cgaGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGCCCt < 2:4489175/91‑1 (MQ=255)
aGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCttt > 2:2786195/1‑93 (MQ=255)
aGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCttt < 2:1066941/93‑1 (MQ=255)
aGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCttt < 1:3333173/93‑1 (MQ=255)
gCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTg > 1:4204883/1‑93 (MQ=255)
gCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTg > 1:5372393/1‑93 (MQ=255)
cTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGAGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTgg > 2:6123899/1‑93 (MQ=255)
aCCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGtt < 1:4420374/93‑1 (MQ=255)
cAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTAc < 1:5054223/93‑1 (MQ=255)
aGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTAcc > 2:4508458/1‑93 (MQ=255)
aGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTAcc > 1:2453202/1‑93 (MQ=255)
gTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCg > 2:3078607/1‑93 (MQ=255)
ttCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCgg < 2:5556782/93‑1 (MQ=255)
cTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGggc < 2:1791373/93‑1 (MQ=255)
aCGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGggcgg < 2:1154568/93‑1 (MQ=255)
aCGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGggcgg < 1:3951465/93‑1 (MQ=255)
cGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGggcggc < 2:1845550/93‑1 (MQ=255)
ggTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCt < 1:853101/93‑1 (MQ=255)
gTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTg > 1:4930675/1‑93 (MQ=255)
tACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGa < 2:2870888/93‑1 (MQ=255)
tACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGa < 2:4639492/93‑1 (MQ=255)
aCCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGAc > 2:2676027/1‑93 (MQ=255)
ccGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGt < 1:1316416/93‑1 (MQ=255)
cGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTa > 2:4867439/1‑93 (MQ=255)
cGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTa > 2:2788534/1‑93 (MQ=255)
cGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTa < 2:5687387/93‑1 (MQ=255)
cGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTa > 1:5768987/1‑93 (MQ=255)
gagaTAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAg > 1:1901735/1‑93 (MQ=255)
gagaTAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAg < 1:1011896/93‑1 (MQ=255)
agaTAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGt > 2:5093356/1‑93 (MQ=255)
gaTAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTg > 2:2368930/1‑93 (MQ=255)
aTAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTgg > 2:101186/1‑93 (MQ=255)
aaGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCCAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGAtt > 2:5763174/1‑93 (MQ=255)
aaGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGAtt > 1:6059502/1‑93 (MQ=255)
aaGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGAtt < 1:4858944/93‑1 (MQ=255)
aaGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGAtt > 1:1701545/1‑93 (MQ=255)
aaGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGAtt < 2:2077740/93‑1 (MQ=255)
aaGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGAtt > 1:541563/1‑93 (MQ=255)
aaGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGAGCGGCTGACGGAGTGGAtt < 1:6322811/93‑1 (MQ=255)
aGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGAttt < 1:5960344/93‑1 (MQ=255)
gTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTg > 2:5473082/1‑93 (MQ=255)
ttGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTgc < 1:5632306/93‑1 (MQ=255)
ttGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTgc > 1:4106813/1‑93 (MQ=255)
gATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTc < 1:1391833/93‑1 (MQ=255)
aTCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCg > 2:6386842/1‑93 (MQ=255)
aTCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCg > 2:4378892/1‑93 (MQ=255)
gCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAg > 2:4204035/1‑93 (MQ=255)
gCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAg > 2:3795728/1‑93 (MQ=255)
cAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAgg > 2:1107135/1‑93 (MQ=255)
cAGCGGCATCGCCCTTAATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTTGTTCCCGGGCGGCGGACGTAGTGGATTTGCGCCTCGAAgg < 1:5179328/93‑1 (MQ=255)
tCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCt > 2:33291/1‑93 (MQ=255)
tCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCt > 2:6402033/1‑93 (MQ=255)
tCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCt < 2:1313290/93‑1 (MQ=255)
tCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCt > 2:3029856/1‑93 (MQ=255)
tCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCt > 2:2478133/1‑93 (MQ=255)
cAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTg < 2:6179686/93‑1 (MQ=255)
cAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTg < 1:2799525/93‑1 (MQ=255)
aaCGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTgg < 1:4909776/93‑1 (MQ=255)
accaCCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTggg < 2:539302/90‑1 (MQ=255)
aCGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTggg > 1:1085450/1‑93 (MQ=255)
aCGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTggg > 1:3995868/1‑93 (MQ=255)
cGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGt < 1:876427/93‑1 (MQ=255)
gACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGtt < 2:5248292/93‑1 (MQ=255)
aCCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTa > 1:1017722/1‑93 (MQ=255)
aCCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTa > 2:4577717/1‑93 (MQ=255)
aCCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTa > 2:1456490/1‑93 (MQ=255)
ccTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTaa < 2:3206207/93‑1 (MQ=255)
cTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAg < 2:1181709/93‑1 (MQ=255)
cTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAg < 1:3863035/93‑1 (MQ=255)
cTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAg < 2:2016970/93‑1 (MQ=255)
ttATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGc < 1:2971214/93‑1 (MQ=255)
tATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCt < 1:2552873/93‑1 (MQ=255)
aTGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTg < 2:2567726/93‑1 (MQ=255)
tGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGa > 2:795631/1‑93 (MQ=255)
tGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGa < 1:2003686/93‑1 (MQ=255)
tGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGa < 2:4904711/93‑1 (MQ=255)
gACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGAc > 1:4818995/1‑93 (MQ=255)
gACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGAGCCTCGAAGGCACCTGGGTTAAGGCTGAc > 2:2314208/1‑93 (MQ=255)
|
GATATCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACGGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGAC > NC_000913/708331‑708510
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGATATCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACGGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGACGGTC > NC_000913/708329‑708514
|
TTGATATCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAG < SRR4302534.64107/94‑1 (MQ=60)
TGATATCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGC > SRR4302534.5862380/1‑94 (MQ=60)
TGATATCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGC > SRR4302534.4160083/1‑94 (MQ=60)
ATCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCG > SRR4302534.18781/1‑94 (MQ=60)
TCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGC > SRR4302534.1212771/1‑94 (MQ=60)
GCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCT < SRR4302534.5702516/94‑1 (MQ=60)
GCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCT > SRR4302534.2198529/1‑94 (MQ=60)
GCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCT > SRR4302534.858472/1‑94 (MQ=60)
CCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTG < SRR4302534.5144275/94‑1 (MQ=60)
CCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTG > SRR4302534.4728957/1‑94 (MQ=60)
CCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTG < SRR4302534.377326/94‑1 (MQ=60)
CGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCCTTATGACACCACCGCCTGG > SRR4302534.4280493/1‑94 (MQ=60)
GTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCTCCTGGCT < SRR4302534.5451049/94‑1 (MQ=60)
TAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTG < SRR4302534.3030020/94‑1 (MQ=60)
AGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGC > SRR4302534.5505920/1‑94 (MQ=60)
GCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCA < SRR4302534.1774187/94‑1 (MQ=60)
CCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAA > SRR4302534.4631328/1‑94 (MQ=60)
CCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAA > SRR4302534.3793303/1‑94 (MQ=60)
CCGTTAACCACCAGGTACCAGTTCTACGGTGCCCGAGATAAAGTTGACGATCGCAGCGTCACCGACCTTTATGACAGCACCGCCTGGCTGCAAG < SRR4302534.2982138/94‑1 (MQ=60)
CCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAG < SRR4302534.582755/94‑1 (MQ=60)
CGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGC > SRR4302534.4320547/1‑94 (MQ=60)
CGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGC > SRR4302534.1026727/1‑94 (MQ=60)
CGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGC < SRR4302534.4040753/94‑1 (MQ=60)
CGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGC < SRR4302534.756375/94‑1 (MQ=60)
GTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCG < SRR4302534.3513584/94‑1 (MQ=60)
TAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTT > SRR4302534.1585335/1‑94 (MQ=60)
TAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTT > SRR4302534.2055177/1‑94 (MQ=60)
TAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTT > SRR4302534.3230092/1‑94 (MQ=60)
TAACAACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCGCCGCCTGGCTGCAAGCGTT < SRR4302534.617706/94‑1 (MQ=60)
ACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGA < SRR4302534.2908862/94‑1 (MQ=60)
CACCAGCTACCAGTTCTACGTTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACC < SRR4302534.1040863/94‑1 (MQ=60)
CACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACC > SRR4302534.5989116/1‑94 (MQ=60)
AGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTG < SRR4302534.3422331/94‑1 (MQ=60)
AGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTG > SRR4302534.4318392/1‑94 (MQ=60)
AGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTG > SRR4302534.1947177/1‑94 (MQ=60)
AGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTG > SRR4302534.5517156/1‑94 (MQ=60)
TACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTT < SRR4302534.2203445/94‑1 (MQ=60)
ACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTA < SRR4302534.4539714/94‑1 (MQ=60)
CCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTAC > SRR4302534.5233588/1‑94 (MQ=60)
CAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACC > SRR4302534.2518390/1‑94 (MQ=60)
CAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACC < SRR4302534.5190730/94‑1 (MQ=60)
AGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCG > SRR4302534.5037672/1‑94 (MQ=60)
TTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGG > SRR4302534.5525385/1‑94 (MQ=60)
TCTACGGTACCCGAGATAAAGTTGACCATCGCAGCGTCAACGACCTATATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGC < SRR4302534.5341640/94‑1 (MQ=60)
ACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGC < SRR4302534.4057242/94‑1 (MQ=60)
ACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGC < SRR4302534.4057243/94‑1 (MQ=60)
CGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCT < SRR4302534.6048399/94‑1 (MQ=60)
GGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTG < SRR4302534.874622/94‑1 (MQ=60)
GGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTG > SRR4302534.5064315/1‑94 (MQ=60)
TACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGAC > SRR4302534.53682/1‑94 (MQ=60)
ACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACG > SRR4302534.4438982/1‑94 (MQ=60)
CCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTA < SRR4302534.1037787/94‑1 (MQ=60)
CCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTA < SRR4302534.1351128/94‑1 (MQ=60)
CCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTA > SRR4302534.5925490/1‑94 (MQ=60)
CGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAG > SRR4302534.1951329/1‑94 (MQ=60)
GAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGT > SRR4302534.6532811/1‑94 (MQ=60)
GAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGT < SRR4302534.1037930/94‑1 (MQ=60)
GAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGG > SRR4302534.5052562/1‑94 (MQ=60)
AGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTG > SRR4302534.1240907/1‑94 (MQ=60)
AGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTG < SRR4302534.1640356/94‑1 (MQ=60)
GATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGG < SRR4302534.3577427/94‑1 (MQ=60)
AAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATT > SRR4302534.6224271/1‑94 (MQ=60)
AAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATT > SRR4302534.3847437/1‑94 (MQ=60)
AAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATT > SRR4302534.554961/1‑94 (MQ=60)
AAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATT < SRR4302534.1826776/94‑1 (MQ=60)
AAAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATT > SRR4302534.1745755/1‑94 (MQ=60)
AAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTT < SRR4302534.4990775/94‑1 (MQ=60)
AAGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGAGCGGCTGACGGAGTGGATTT < SRR4302534.6493663/94‑1 (MQ=60)
TGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGGAAGCGTTGACCTTTGGTTAACGGGCGGCTGACGTAGTGGATTTG > SRR4302534.3409073/1‑94 (MQ=60)
AGTTGACGATCGCAGCGTCAACGACCTTTATTACAGCACCCCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCcgaacgagtggcttcg > SRR4302534.1836688/1‑78 (MQ=60)
AGTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTG < SRR4302534.6122175/94‑1 (MQ=60)
GTTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGC > SRR4302534.4217268/1‑94 (MQ=60)
TTGACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCG < SRR4302534.5784742/94‑1 (MQ=60)
ACGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCT < SRR4302534.258921/94‑1 (MQ=60)
CGTTCGCGGCGTCAACGCCCTTTATGACAGCACCGCGTGGCTGCAAGCGTTGACCTTGGGTTCCCGGGCGGCTGACGTAGTGGATTTGCGCCTC < SRR4302534.3395266/94‑1 (MQ=60)
CGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTC < SRR4302534.959822/94‑1 (MQ=60)
CGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTC < SRR4302534.107579/94‑1 (MQ=60)
CGATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTC < SRR4302534.1020237/94‑1 (MQ=60)
GATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACTGGGCGGCTGACGTAGTGGATTTGCGCCTCG < SRR4302534.5736429/94‑1 (MQ=60)
GATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCG > SRR4302534.4988032/1‑94 (MQ=60)
GATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCG > SRR4302534.3089426/1‑94 (MQ=60)
GATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCG > SRR4302534.2073423/1‑94 (MQ=60)
GATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCG < SRR4302534.1428467/94‑1 (MQ=60)
GATCGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCG > SRR4302534.5658661/1‑94 (MQ=60)
CGCAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAG < SRR4302534.2852/94‑1 (MQ=60)
CAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGC > SRR4302534.3476608/1‑94 (MQ=60)
CAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGC > SRR4302534.2885275/1‑94 (MQ=60)
CAGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGC > SRR4302534.1248645/1‑94 (MQ=60)
CAGCGGCATCGCCCTTAATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTTGTTCCCGGGCGGCGGACGTAGTGGATTTGCGCCTCGAAGGC < SRR4302534.5318862/94‑1 (MQ=60)
AGCGTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCA > SRR4302534.148713/1‑94 (MQ=60)
GTCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCT < SRR4302534.5018057/94‑1 (MQ=60)
TCAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTG < SRR4302534.2546898/94‑1 (MQ=60)
CAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGG < SRR4302534.2873153/94‑1 (MQ=60)
CAACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGG < SRR4302534.1367834/94‑1 (MQ=60)
AACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGG < SRR4302534.5042849/94‑1 (MQ=60)
AACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGG > SRR4302534.6286081/1‑94 (MQ=60)
AACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGG > SRR4302534.1113665/1‑94 (MQ=60)
AACGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGG > SRR4302534.4102838/1‑94 (MQ=60)
ACGACCTTTCTGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGT > SRR4302534.6478335/1‑94 (MQ=60)
CGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTT < SRR4302534.898593/94‑1 (MQ=60)
CGACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTT < SRR4302534.5937078/94‑1 (MQ=60)
GACCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTA > SRR4302534.1043921/1‑94 (MQ=60)
CCTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAG > SRR4302534.88673/1‑94 (MQ=60)
CTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGG < SRR4302534.3966758/94‑1 (MQ=60)
CTTTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGG > SRR4302534.1117431/1‑94 (MQ=60)
TTATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCT < SRR4302534.3049005/94‑1 (MQ=60)
TATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTG < SRR4302534.4818175/94‑1 (MQ=60)
TATGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTG < SRR4302534.2620557/94‑1 (MQ=60)
TGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGAC > SRR4302534.3212102/1‑94 (MQ=60)
TGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGAC > SRR4302534.4949785/1‑94 (MQ=60)
TGACAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGAC < SRR4302534.2056128/94‑1 (MQ=60)
CAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGACGGT < SRR4302534.1966023/94‑1 (MQ=60)
CAGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGACGGT < SRR4302534.884411/94‑1 (MQ=60)
AGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGACGGTC > SRR4302534.4144379/1‑94 (MQ=60)
|
TTGATATCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACGGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGACGGTC > NC_000913/708329‑708514
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
