Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
716,521 |
A→G |
V323A (GTG→GCG) |
potE ← |
putrescine transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 716,521 | 0 | A | G | 99.5%
| 739.3
/ ‑4.5
| 213 | V323A (GTG→GCG) | potE | putrescine transport protein |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (103/109); total (103/110) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.36e-01 |
Only 100 of 217 total aligned reads displayed.
ACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAAC > NC_000913/716431‑716610
|
aCCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGcc > 1:236331/1‑93 (MQ=255)
aCCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGcc > 2:5634003/1‑93 (MQ=255)
aGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGt > 1:4142754/1‑93 (MQ=255)
aGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGt < 2:237418/93‑1 (MQ=255)
gCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTg < 1:779074/93‑1 (MQ=255)
cGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCAt < 2:5358140/93‑1 (MQ=255)
actgactgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACtt < 2:2267889/93‑1 (MQ=255)
actgactgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACtt < 2:3600836/93‑1 (MQ=255)
actgactgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACtt > 1:5922148/1‑93 (MQ=255)
actgactgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACtt > 1:644452/1‑93 (MQ=255)
actgactgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACtt > 2:2757141/1‑93 (MQ=255)
gactgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTgg > 2:1265920/1‑93 (MQ=255)
actgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGt < 2:5036749/93‑1 (MQ=255)
actgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGt > 2:3285357/1‑93 (MQ=255)
ctgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGtt < 2:6400691/93‑1 (MQ=255)
ctgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGtt > 1:333747/1‑93 (MQ=255)
gTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTac > 1:4246782/1‑93 (MQ=255)
tttAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTaca < 2:4349352/93‑1 (MQ=255)
tAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACg < 1:6338001/93‑1 (MQ=255)
gCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACggg < 1:3830701/93‑1 (MQ=255)
cGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGga < 2:3338550/93‑1 (MQ=255)
cGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGga < 1:4803734/93‑1 (MQ=255)
cGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGga < 1:4344314/93‑1 (MQ=255)
cGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGga < 1:44500/93‑1 (MQ=255)
gACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGgag < 1:1498773/93‑1 (MQ=255)
gACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGgag < 2:4634733/93‑1 (MQ=255)
gggCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGaaa > 2:2497711/1‑93 (MQ=255)
gggCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGaaa < 2:2954691/93‑1 (MQ=255)
gCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAAt > 1:316385/1‑93 (MQ=255)
cTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAAtt > 2:3113593/1‑93 (MQ=255)
tAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAAttt > 1:1229745/1‑93 (MQ=255)
tAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAAttt > 1:5735785/1‑93 (MQ=255)
aaTGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAAtttt > 1:3636967/1‑93 (MQ=255)
aaTGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAAtttt > 2:2807747/1‑93 (MQ=255)
aTGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTa < 2:6184279/93‑1 (MQ=255)
aTGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTa > 1:5784141/1‑93 (MQ=255)
aTGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTa > 2:2274178/1‑93 (MQ=255)
tGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAg < 2:6313710/93‑1 (MQ=255)
tGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAg > 2:3770445/1‑93 (MQ=255)
ggTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAgg < 2:5990444/93‑1 (MQ=255)
tcatcaGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGa < 2:4852159/93‑1 (MQ=255)
tcatcaGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGa > 1:6268225/1‑93 (MQ=255)
catcaGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGaa > 1:4936018/1‑93 (MQ=255)
catcaGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGaa > 2:290518/1‑93 (MQ=255)
catcaGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGaa < 2:1620723/93‑1 (MQ=255)
catcaGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGaa > 2:4693138/1‑93 (MQ=255)
atcaGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAg > 2:178785/1‑93 (MQ=255)
atcaGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAg > 2:4236974/1‑93 (MQ=255)
aGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAg > 2:4946059/1‑93 (MQ=255)
aGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAg < 1:508713/93‑1 (MQ=255)
tGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGcc < 2:5405592/93‑1 (MQ=255)
gCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCt > 2:3311690/1‑93 (MQ=255)
gCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCt < 1:450312/93‑1 (MQ=255)
ccAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCtt > 2:71018/1‑93 (MQ=255)
cAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTtc < 2:1421237/93‑1 (MQ=255)
cAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTtc < 2:789651/93‑1 (MQ=255)
aaTCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTtca > 2:2149382/1‑93 (MQ=255)
aaTCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTtca < 1:6097805/93‑1 (MQ=255)
aaTCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTtca < 1:5484902/93‑1 (MQ=255)
aTCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTtcat > 1:661485/1‑93 (MQ=255)
tCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTtcatc < 1:2497518/93‑1 (MQ=255)
tCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTtcatc > 1:1954521/1‑93 (MQ=255)
ccACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTtcatca < 2:4022284/93‑1 (MQ=255)
cACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAg > 2:5780483/1‑93 (MQ=255)
aCTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGa > 1:3493998/1‑93 (MQ=255)
ctctGAATAATCACAATGGTCAACCTTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGTACATTTTAGGGAAGTAGCCTTCATCAGAt > 1:3988897/1‑93 (MQ=255)
tctGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATg < 1:3065107/93‑1 (MQ=255)
gAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAg > 2:5093320/1‑93 (MQ=255)
aataatCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGa > 2:3987404/1‑93 (MQ=255)
ataatCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGAt < 1:5033128/93‑1 (MQ=255)
ataatCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGAt < 2:2674531/93‑1 (MQ=255)
taatCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGAtt < 2:6226649/93‑1 (MQ=255)
aatCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGAttt > 1:2304250/1‑93 (MQ=255)
cacaATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTaaa > 1:2139448/1‑93 (MQ=255)
cacaATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTaaa > 2:1868335/1‑93 (MQ=255)
acaATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAac > 2:4155301/1‑93 (MQ=255)
acaATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAac > 1:1203347/1‑93 (MQ=255)
caATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAaca > 2:601308/1‑93 (MQ=255)
caATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAaca < 2:660374/93‑1 (MQ=255)
aTGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACAcc < 1:380925/93‑1 (MQ=255)
tGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCt > 1:3479309/1‑93 (MQ=255)
tGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCt < 2:3160310/93‑1 (MQ=255)
tGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCt < 1:5322201/93‑1 (MQ=255)
ggTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTg < 1:1147271/93‑1 (MQ=255)
ggTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTg < 1:1662512/93‑1 (MQ=255)
gTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTgg > 2:5574309/1‑93 (MQ=255)
gTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTgg < 2:1511224/93‑1 (MQ=255)
tCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTggg > 1:5628839/1‑93 (MQ=255)
gcAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTggg < 1:152559/92‑1 (MQ=255)
cAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGc < 2:5510187/93‑1 (MQ=255)
aaCATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCa > 2:4549839/1‑93 (MQ=255)
aCATTCCCTGCGCCGTTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCaa < 1:2257616/93‑1 (MQ=255)
ttCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATgg > 1:1069542/1‑93 (MQ=255)
tCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGt > 1:343024/1‑93 (MQ=255)
tCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGt < 1:6187307/93‑1 (MQ=255)
cccTGCGCGGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTg < 1:5211686/93‑1 (MQ=255)
cccTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTg < 2:1151291/93‑1 (MQ=255)
cccTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTg < 1:3236088/93‑1 (MQ=255)
cccTGCGCCCGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTg < 1:2869217/93‑1 (MQ=255)
tGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAAc < 2:6077179/93‑1 (MQ=255)
|
ACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAAC > NC_000913/716431‑716610
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCC > NC_000913/716428‑716614
|
TTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCG < SRR4302534.3938449/94‑1 (MQ=60)
TTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCG < SRR4302534.2606558/94‑1 (MQ=60)
TAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGC > SRR4302534.5468689/1‑94 (MQ=60)
AACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCC < SRR4302534.145886/94‑1 (MQ=60)
AACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCC > SRR4302534.242516/1‑94 (MQ=60)
ACCAGCACGTTGAGCTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCG < SRR4302534.5142868/94‑1 (MQ=60)
CAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGT < SRR4302534.4053601/94‑1 (MQ=60)
CAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGT > SRR4302534.4254556/1‑94 (MQ=60)
CAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGT > SRR4302534.5940031/1‑94 (MQ=60)
AGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTG > SRR4302534.3953217/1‑94 (MQ=60)
AGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTG > SRR4302534.2572416/1‑94 (MQ=60)
AGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTG > SRR4302534.2472556/1‑94 (MQ=60)
GCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGC < SRR4302534.798497/94‑1 (MQ=60)
GTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCC < SRR4302534.5389752/94‑1 (MQ=60)
TTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCA < SRR4302534.2419588/94‑1 (MQ=60)
GAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACT > SRR4302534.4597489/1‑94 (MQ=60)
GAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACT < SRR4302534.1179246/94‑1 (MQ=60)
AACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTT > SRR4302534.6082947/1‑94 (MQ=60)
AACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTT > SRR4302534.660082/1‑94 (MQ=60)
ACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTT > SRR4302534.128473/1‑94 (MQ=60)
ACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTT < SRR4302534.6481765/94‑1 (MQ=60)
CTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTG < SRR4302534.5046764/94‑1 (MQ=60)
ACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTT > SRR4302534.342310/1‑94 (MQ=60)
CTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTA < SRR4302534.6646219/94‑1 (MQ=60)
TGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTAC > SRR4302534.4361330/1‑94 (MQ=60)
TTAGCGACGGGCTAATGGTCATCAGTGCCAGTCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACG < SRR4302534.2501727/94‑1 (MQ=60)
TAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGG < SRR4302534.6509205/94‑1 (MQ=60)
GCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGA < SRR4302534.3933586/94‑1 (MQ=60)
CGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAG < SRR4302534.4461655/94‑1 (MQ=60)
CGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAG < SRR4302534.45684/94‑1 (MQ=60)
CGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAG < SRR4302534.4934167/94‑1 (MQ=60)
GACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGA < SRR4302534.1538218/94‑1 (MQ=60)
GACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGA > SRR4302534.43347/1‑94 (MQ=60)
ACGGGCTAACGGCCATCAGTGCCAATCCACTCTGGATAACCACAATGGTCAACATTACCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAA > SRR4302534.3203224/1‑94 (MQ=60)
GGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAAT > SRR4302534.324532/1‑94 (MQ=60)
CTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTT > SRR4302534.1262119/1‑94 (MQ=60)
CTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTT > SRR4302534.5891220/1‑94 (MQ=60)
TAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTT > SRR4302534.3734720/1‑94 (MQ=60)
AATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTA > SRR4302534.6163177/1‑94 (MQ=60)
AATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTA > SRR4302534.5941036/1‑94 (MQ=60)
ATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAG < SRR4302534.3521603/94‑1 (MQ=60)
TGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGG < SRR4302534.114216/94‑1 (MQ=60)
GGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGG < SRR4302534.3912904/94‑1 (MQ=60)
GTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGA > SRR4302534.6437962/1‑94 (MQ=60)
TCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAA > SRR4302534.5069784/1‑94 (MQ=60)
CAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGAGAGAAAATTTTAGCGAAATAG > SRR4302534.6354917/1‑94 (MQ=60)
AGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGC < SRR4302534.521374/94‑1 (MQ=60)
GCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTT < SRR4302534.461719/94‑1 (MQ=60)
GCAAATCCACTCTGAATAATCACAATGGTCAACATGCCATGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTT < SRR4302534.5533789/94‑1 (MQ=60)
AATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCAT < SRR4302534.3440333/94‑1 (MQ=60)
AATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCAT > SRR4302534.677573/1‑94 (MQ=60)
AATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCAT < SRR4302534.5632829/94‑1 (MQ=60)
AATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCAT < SRR4302534.6263630/94‑1 (MQ=60)
ATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATC > SRR4302534.5206864/1‑94 (MQ=60)
ATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATC > SRR4302534.2005676/1‑94 (MQ=60)
TCCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCA < SRR4302534.2563846/94‑1 (MQ=60)
CCACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAG < SRR4302534.4468331/94‑1 (MQ=60)
CACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGA > SRR4302534.168443/1‑94 (MQ=60)
CACTCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGA > SRR4302534.3587931/1‑94 (MQ=60)
ACTCTGAATAATCACAATGGTCAACCTTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGTACATTTTAGGGAAGTAGCCTTCATCAGAT > SRR4302534.4095616/1‑94 (MQ=60)
TCTGAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGA < SRR4302534.3145562/94‑1 (MQ=60)
TCTGAAAAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGA < SRR4302534.5744256/94‑1 (MQ=60)
GAATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGA < SRR4302534.1560967/94‑1 (MQ=60)
AATAATCTCAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGAT > SRR4302534.5502882/1‑94 (MQ=60)
AATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGTGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGAT < SRR4302534.6567619/94‑1 (MQ=60)
AATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGAT < SRR4302534.1800654/94‑1 (MQ=60)
AATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGAT < SRR4302534.6274840/94‑1 (MQ=60)
ATAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATT < SRR4302534.5169084/94‑1 (MQ=60)
TAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTT > SRR4302534.2365409/1‑94 (MQ=60)
TAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTT < SRR4302534.3548210/94‑1 (MQ=60)
TAATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTT < SRR4302534.3401761/94‑1 (MQ=60)
AATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTA < SRR4302534.5293369/94‑1 (MQ=60)
AATCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTA > SRR4302534.3578122/1‑94 (MQ=60)
TCACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAA > SRR4302534.2195857/1‑94 (MQ=60)
CACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAAC > SRR4302534.1235013/1‑94 (MQ=60)
CACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAAC > SRR4302534.985880/1‑94 (MQ=60)
ACAATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGTCTTCATCAGATGAAGATTTAAACA > SRR4302534.3064973/1‑94 (MQ=60)
AATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACC < SRR4302534.3622599/94‑1 (MQ=60)
ATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCT > SRR4302534.3572830/1‑94 (MQ=60)
ATGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCT < SRR4302534.390666/94‑1 (MQ=60)
TGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTG > SRR4302534.895658/1‑94 (MQ=60)
TGGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTG < SRR4302534.5465742/94‑1 (MQ=60)
GGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGG > SRR4302534.736864/1‑94 (MQ=60)
GGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGG < SRR4302534.1177339/94‑1 (MQ=60)
GGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGG < SRR4302534.1705799/94‑1 (MQ=60)
GGTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGG < SRR4302534.169162/94‑1 (MQ=60)
GTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGG < SRR4302534.3250188/94‑1 (MQ=60)
GTCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGG > SRR4302534.5781177/1‑94 (MQ=60)
GCAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGC < SRR4302534.156533/94‑1 (MQ=60)
CAACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATCAAGATTTAAACACCTGGGCA > SRR4302534.4629837/1‑94 (MQ=60)
AACATTCCCTGCGCCGGAGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAA > SRR4302534.2207356/1‑94 (MQ=60)
ACATTCCCTGCGCCGTTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAAT < SRR4302534.2317471/94‑1 (MQ=60)
ACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAAT < SRR4302534.1237039/94‑1 (MQ=60)
ACATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAAT < SRR4302534.3904450/94‑1 (MQ=60)
CATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATG < SRR4302534.6019824/94‑1 (MQ=60)
CATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATG > SRR4302534.2347374/1‑94 (MQ=60)
ATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGG > SRR4302534.4150575/1‑94 (MQ=60)
ATTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGG > SRR4302534.1097284/1‑94 (MQ=60)
TTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGT > SRR4302534.3180654/1‑94 (MQ=60)
TTCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGT > SRR4302534.351806/1‑94 (MQ=60)
TCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTG < SRR4302534.6355702/94‑1 (MQ=60)
TCCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTG > SRR4302534.218244/1‑94 (MQ=60)
CCCTGCGCGGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGA < SRR4302534.5352338/94‑1 (MQ=60)
CCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGA < SRR4302534.3322166/94‑1 (MQ=60)
CCCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGA > SRR4302534.4741990/1‑94 (MQ=60)
CCCTGCGCCCGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGA < SRR4302534.2944557/94‑1 (MQ=60)
CCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAA < SRR4302534.638633/94‑1 (MQ=60)
CCTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAA > SRR4302534.5816256/1‑94 (MQ=60)
CTGCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAAC < SRR4302534.4454418/94‑1 (MQ=60)
GCGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTG > SRR4302534.3071376/1‑94 (MQ=60)
CGCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGC > SRR4302534.6210209/1‑94 (MQ=60)
GCCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCC > SRR4302534.3025936/1‑94 (MQ=60)
|
TTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCC > NC_000913/716428‑716614
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
