Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,747,993 |
A→C |
L127R (CTG→CGG) |
ydhU ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,747,993 | 0 | A | C | 100.0%
| 592.3
/ NA
| 171 | L127R (CTG→CGG) | ydhU | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (99/72); total (99/72) |
Only 100 of 176 total aligned reads displayed.
AATAAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCAGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCATC > NC_000913/1747904‑1748082
|
aaTAAAAGCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGca < 1:1938178/93‑1 (MQ=255)
aaaaTCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACaa > 1:4919542/1‑93 (MQ=255)
aaaTCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACaaa > 1:5941022/1‑93 (MQ=255)
aaaTCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACaaa > 1:6438921/1‑93 (MQ=255)
aaTCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAg > 1:3820020/1‑93 (MQ=255)
aaTCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAg > 1:3562589/1‑93 (MQ=255)
aaTCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAg > 1:4518863/1‑93 (MQ=255)
gcgTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGa < 1:5481801/93‑1 (MQ=255)
gcgTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGa < 1:4538431/93‑1 (MQ=255)
cgTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCGTTGATCCGCACAAAGCCGAg < 1:5253863/93‑1 (MQ=255)
cgTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAg < 2:1142460/93‑1 (MQ=255)
cgTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAg < 1:4877445/93‑1 (MQ=255)
gtttgtttTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGc < 2:4485318/93‑1 (MQ=255)
tttgtttTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGcc > 1:5726107/1‑93 (MQ=255)
tttgtttTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGcc > 2:3213780/1‑93 (MQ=255)
ttgtttTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCa < 2:3607888/93‑1 (MQ=255)
gtttTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGc > 2:4999536/1‑93 (MQ=255)
gtttTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGc > 1:1233171/1‑93 (MQ=255)
ttcccGCTCGTCCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATg < 1:5083505/90‑1 (MQ=255)
ttGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATg > 1:2548702/1‑93 (MQ=255)
ttGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATg > 2:627736/1‑93 (MQ=255)
gCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGcc < 2:3793107/93‑1 (MQ=255)
gCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGcc > 1:1484390/1‑93 (MQ=255)
ccGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCa < 2:3356217/93‑1 (MQ=255)
gCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGt > 1:2336259/1‑93 (MQ=255)
cTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTa > 2:5328705/1‑93 (MQ=255)
tCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAACGCCGAGCCAGCATGCCAGTaa > 1:892980/1‑93 (MQ=255)
cGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAAc > 1:3192778/1‑93 (MQ=255)
cGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAAc > 2:4542509/1‑93 (MQ=255)
gTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACa > 1:2093248/1‑93 (MQ=255)
ttCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACaa > 2:2855313/1‑93 (MQ=255)
ttCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACaa > 1:6176056/1‑93 (MQ=255)
ttCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACaa > 1:4178122/1‑93 (MQ=255)
tCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACaaa < 2:1625833/93‑1 (MQ=255)
aGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAAt < 1:6122509/93‑1 (MQ=255)
gCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATc > 2:4335682/1‑93 (MQ=255)
gCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATc > 1:3006545/1‑93 (MQ=255)
ccACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATcc < 1:1362484/93‑1 (MQ=255)
ccACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATcc < 2:4499613/93‑1 (MQ=255)
ccACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATcc < 1:1632597/93‑1 (MQ=255)
ccACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATcc < 1:5106075/93‑1 (MQ=255)
ccACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATcc < 1:1696734/93‑1 (MQ=255)
cACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCg > 1:5998223/1‑93 (MQ=255)
aCCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGc > 1:1056394/1‑93 (MQ=255)
ccccTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCa > 1:4708067/1‑93 (MQ=255)
ccccTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCa > 1:2820623/1‑93 (MQ=255)
ccccTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCa > 1:5045564/1‑93 (MQ=255)
cTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAAc < 1:3297222/93‑1 (MQ=255)
cTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAAc > 2:6004325/1‑93 (MQ=255)
cTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAAc > 1:4793989/1‑93 (MQ=255)
cgacgacGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACt < 1:2484847/92‑1 (MQ=255)
acgacgAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTc < 2:5906806/93‑1 (MQ=255)
acgacgAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTc > 2:4127424/1‑93 (MQ=255)
acgacgAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTc < 2:2860764/93‑1 (MQ=255)
gacgaATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCAt < 2:1356885/93‑1 (MQ=255)
gacgaATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCAt > 2:6144114/1‑93 (MQ=255)
gacgaATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCAt < 2:930032/93‑1 (MQ=255)
gacgaATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCAt > 1:2669047/1‑93 (MQ=255)
gacgaATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCAt > 1:2835417/1‑93 (MQ=255)
acgaATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATg < 1:1186209/93‑1 (MQ=255)
acgaATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATg > 1:2152044/1‑93 (MQ=255)
cgaATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGc < 2:6374627/93‑1 (MQ=255)
aaTGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCAc < 2:5335180/93‑1 (MQ=255)
aTGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCAcc < 1:5817073/93‑1 (MQ=255)
aTGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCAcc < 2:2985146/93‑1 (MQ=255)
tGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCg < 1:3640320/93‑1 (MQ=255)
gCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGc > 1:754852/1‑93 (MQ=255)
aTAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAAc < 1:1149132/93‑1 (MQ=255)
aTAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAAc < 2:1110418/93‑1 (MQ=255)
aGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCa > 1:3714031/1‑93 (MQ=255)
gtggtgACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAg > 1:2618687/1‑93 (MQ=255)
tggtgACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGa > 2:1234214/1‑93 (MQ=255)
ggtgACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGAc > 1:5578810/1‑93 (MQ=255)
gtgACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACt > 1:4832711/1‑93 (MQ=255)
tgACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACtt < 1:1742881/93‑1 (MQ=255)
gACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACttt < 2:4228057/93‑1 (MQ=255)
aCCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACtttt > 1:4459546/1‑93 (MQ=255)
aTTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAAc < 2:3397361/93‑1 (MQ=255)
aTTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAAc < 2:6096149/93‑1 (MQ=255)
aTTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAAc > 1:3071738/1‑93 (MQ=255)
tATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCg > 1:4260885/1‑93 (MQ=255)
aTCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGc > 1:6365747/1‑93 (MQ=255)
tCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCa > 1:3154690/1‑93 (MQ=255)
cccAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGt < 1:2219407/93‑1 (MQ=255)
ccAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGtt > 1:434635/1‑93 (MQ=255)
ccAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGtt < 2:5960487/93‑1 (MQ=255)
ccAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGtt < 2:3050447/93‑1 (MQ=255)
caaaCGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGtt < 1:3223668/91‑1 (MQ=255)
aaCGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTgc < 2:2546838/93‑1 (MQ=255)
aaCGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTgc > 2:738044/1‑93 (MQ=255)
ggCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGcc > 2:2923522/1‑93 (MQ=255)
cATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCcca > 1:5716786/1‑93 (MQ=255)
aTTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCccac > 1:2803623/1‑93 (MQ=255)
ttGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCccacc < 2:6301088/93‑1 (MQ=255)
tGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCccacca < 2:1913708/93‑1 (MQ=255)
gATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCAt < 2:1922636/93‑1 (MQ=255)
gATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCAt > 1:4531581/1‑93 (MQ=255)
aTCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCATc < 2:5590353/93‑1 (MQ=255)
aTCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCATc > 2:2077717/1‑93 (MQ=255)
aTCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCATc < 1:1003314/93‑1 (MQ=255)
|
AATAAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCAGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCATC > NC_000913/1747904‑1748082
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AACAAATAAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCAGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCATCGCAA > NC_000913/1747900‑1748086
|
AACAAATAAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCC > SRR4302534.5284511/1‑94 (MQ=60)
ACAAATAAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCG < SRR4302534.5362044/94‑1 (MQ=60)
ACAAATAAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCG < SRR4302534.232313/94‑1 (MQ=60)
ACAAATAAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCG > SRR4302534.314398/1‑94 (MQ=60)
CAAATAAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGC < SRR4302534.1500389/94‑1 (MQ=60)
AAATAAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCA > SRR4302534.4641404/1‑94 (MQ=60)
AATAAAAGCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCAC < SRR4302534.1988859/94‑1 (MQ=60)
ATAAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACA > SRR4302534.6315619/1‑94 (MQ=60)
TAAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAA > SRR4302534.5052877/1‑94 (MQ=60)
AAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAA > SRR4302534.6612454/1‑94 (MQ=60)
AAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAA > SRR4302534.6102330/1‑94 (MQ=60)
AAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAG > SRR4302534.3922653/1‑94 (MQ=60)
AAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAG > SRR4302534.545186/1‑94 (MQ=60)
AAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAG > SRR4302534.4641277/1‑94 (MQ=60)
AAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAG > SRR4302534.1196451/1‑94 (MQ=60)
AAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAG > SRR4302534.3658431/1‑94 (MQ=60)
AAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAC > SRR4302534.5862138/1‑94 (MQ=60)
AAATCGCGTATGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAG > SRR4302534.6469227/1‑94 (MQ=60)
CGCGTGTGTTTTGCCACTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGAACCTCACAAAGCCGA < SRR4302534.2890322/94‑1 (MQ=60)
GCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAG > SRR4302534.4691891/1‑94 (MQ=60)
GCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAG < SRR4302534.4661436/94‑1 (MQ=60)
GCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAG < SRR4302534.5629630/94‑1 (MQ=60)
GCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGCGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAC > SRR4302534.5712733/1‑94 (MQ=60)
CGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCGTTGATCCGCACAAAGCCGAGC < SRR4302534.5395839/94‑1 (MQ=60)
CGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGC < SRR4302534.5009732/94‑1 (MQ=60)
GTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCC > SRR4302534.5881255/1‑94 (MQ=60)
GTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCC < SRR4302534.3348751/94‑1 (MQ=60)
TTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAG < SRR4302534.1485302/94‑1 (MQ=60)
TGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGC > SRR4302534.1265668/1‑94 (MQ=60)
TTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATG > SRR4302534.2616282/1‑94 (MQ=60)
TTCCCGCTCGTCCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGC < SRR4302534.5220714/94‑1 (MQ=60)
TGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCC > SRR4302534.1523442/1‑94 (MQ=60)
TGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCC > SRR4302534.4855673/1‑94 (MQ=60)
CCGCTCCTTCCAGCCACCCCTGACGACCAATGCGATAGTGGTGACCATTATCCCCCACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAG < SRR4302534.313148/94‑1 (MQ=60)
CGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGT > SRR4302534.4305012/1‑94 (MQ=60)
CGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGT > SRR4302534.2587261/1‑94 (MQ=60)
CGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGT > SRR4302534.2398256/1‑94 (MQ=60)
CTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATTCCCAACGGCATTGAACCGCACAAAGCCGAGCCAGCATGCCAGTAA > SRR4302534.1218995/1‑94 (MQ=60)
CTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAACGCCGAGCCAGCATGCCAGTAA > SRR4302534.915602/1‑94 (MQ=60)
CTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAA > SRR4302534.5308500/1‑94 (MQ=60)
TCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAAC > SRR4302534.3277354/1‑94 (MQ=60)
CGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACA > SRR4302534.2148142/1‑94 (MQ=60)
GTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAA > SRR4302534.4291008/1‑94 (MQ=60)
GTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAA > SRR4302534.6344116/1‑94 (MQ=60)
GTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAAAAA > SRR4302534.6097607/1‑94 (MQ=60)
GTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGACAGCATGCCAGTAACAA > SRR4302534.1135542/1‑94 (MQ=60)
CAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAAT > SRR4302534.956605/1‑94 (MQ=60)
AGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATC > SRR4302534.1716884/1‑94 (MQ=60)
AGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATC > SRR4302534.3639310/1‑94 (MQ=60)
AGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATC < SRR4302534.6289046/94‑1 (MQ=60)
AGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATC > SRR4302534.3085200/1‑94 (MQ=60)
CCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCG < SRR4302534.1740824/94‑1 (MQ=60)
CCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCG < SRR4302534.1675159/94‑1 (MQ=60)
CCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCG < SRR4302534.1398387/94‑1 (MQ=60)
CCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCG > SRR4302534.6161180/1‑94 (MQ=60)
CCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCG < SRR4302534.5243870/94‑1 (MQ=60)
TACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGC > SRR4302534.1083744/1‑94 (MQ=60)
CACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGC < SRR4302534.5140557/94‑1 (MQ=60)
ACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCA > SRR4302534.4835887/1‑94 (MQ=60)
ACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCA > SRR4302534.5181809/1‑94 (MQ=60)
ACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCA > SRR4302534.2894786/1‑94 (MQ=60)
CCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAAC > SRR4302534.4924150/1‑94 (MQ=60)
CCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAAC > SRR4302534.5194870/1‑94 (MQ=60)
CTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACT < SRR4302534.3385190/94‑1 (MQ=60)
TGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTT < SRR4302534.864319/94‑1 (MQ=60)
CGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTT < SRR4302534.2550856/94‑1 (MQ=60)
ACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCA > SRR4302534.3248495/1‑94 (MQ=60)
CGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCAT > SRR4302534.2909909/1‑94 (MQ=60)
CGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCAT > SRR4302534.2739589/1‑94 (MQ=60)
CGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCAT < SRR4302534.6608000/94‑1 (MQ=60)
GACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATG > SRR4302534.3662234/1‑94 (MQ=60)
GACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATG > SRR4302534.2208852/1‑94 (MQ=60)
ACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGC < SRR4302534.1217396/94‑1 (MQ=60)
GAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCAC < SRR4302534.3980490/94‑1 (MQ=60)
ATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCG > SRR4302534.2159823/1‑94 (MQ=60)
ATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCG < SRR4302534.5974958/94‑1 (MQ=60)
TGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGC > SRR4302534.773562/1‑94 (MQ=60)
TGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGC < SRR4302534.3738161/94‑1 (MQ=60)
CGATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAA < SRR4302534.1595708/94‑1 (MQ=60)
ATAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACC < SRR4302534.1179248/94‑1 (MQ=60)
TAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCA > SRR4302534.3813894/1‑94 (MQ=60)
TAGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCA > SRR4302534.2785906/1‑94 (MQ=60)
AGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAG < SRR4302534.2442789/94‑1 (MQ=60)
AGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAG < SRR4302534.3063238/94‑1 (MQ=60)
AGTGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAG > SRR4302534.2687988/1‑94 (MQ=60)
TGGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGAC > SRR4302534.5729519/1‑94 (MQ=60)
GGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACT > SRR4302534.4963824/1‑94 (MQ=60)
GGTGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACT < SRR4302534.3881191/94‑1 (MQ=60)
TGACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTT < SRR4302534.1788119/94‑1 (MQ=60)
GACCATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTT > SRR4302534.4580118/1‑94 (MQ=60)
CATTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAAC > SRR4302534.3152437/1‑94 (MQ=60)
TTATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCG > SRR4302534.4375969/1‑94 (MQ=60)
TATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGC > SRR4302534.6537645/1‑94 (MQ=60)
ATCCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCA > SRR4302534.3237775/1‑94 (MQ=60)
CCCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGT > SRR4302534.5945485/1‑94 (MQ=60)
CCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTT > SRR4302534.445715/1‑94 (MQ=60)
CCCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTT < SRR4302534.2278187/94‑1 (MQ=60)
CCAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTG < SRR4302534.2314693/94‑1 (MQ=60)
CAAACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTG < SRR4302534.3309285/94‑1 (MQ=60)
AACGGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCG > SRR4302534.2706499/1‑94 (MQ=60)
GGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCC > SRR4302534.4588707/1‑94 (MQ=60)
GGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCC > SRR4302534.3159071/1‑94 (MQ=60)
GGCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCC > SRR4302534.205621/1‑94 (MQ=60)
GCATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCA > SRR4302534.5871676/1‑94 (MQ=60)
CATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCAC > SRR4302534.2877371/1‑94 (MQ=60)
CATTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCAC > SRR4302534.5052154/1‑94 (MQ=60)
TTGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCA < SRR4302534.4962142/94‑1 (MQ=60)
TGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCAT > SRR4302534.4518883/1‑94 (MQ=60)
TGATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCAT > SRR4302534.4654379/1‑94 (MQ=60)
GATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAACTCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCATC < SRR4302534.6148729/94‑1 (MQ=60)
ATCCGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCATCG < SRR4302534.1029051/94‑1 (MQ=60)
CGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCTACCATCGCCA > SRR4302534.3556436/1‑94 (MQ=60)
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AACAAATAAAATCGCGTTTGTTTTGCCGCTCGTTCCAGCCACCCCTGACGACGAATGCGATAGTGGTGACCATTATCCCCAACGGCATTGATCAGCACAAAGCCGAGCCAGCATGCCAGTAACAAAAATCCGCAAACTTCATGCACCGCAACCAGACTTTTAACCGCAGTTGCGCCCACCATCGCAA > NC_000913/1747900‑1748086
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
