Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	521	238.2	12299412	96.0%	11807435	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,949,410	2 bp→TC	coding (588‑589/600 nt)	yecD →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,949,410	0	C	T	75.3%	1935.5 / inf	936	L196L (CTC→CTT)	yecD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (129/102); new base T (345/360); total (474/462)
Fisher's exact test for biased strand distribution p-value = 6.94e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.04e-01
*	NC_000913	1,949,411	0	A	C	75.6%	2359.3 / inf	931	N197H (AAC→CAC)	yecD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (125/102); new base C (344/360); total (469/462)
Fisher's exact test for biased strand distribution p-value = 1.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.43e-01

Only 100 of 965 total aligned reads displayed.

GCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACT  >  NC_000913/1949318‑1949503

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gCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCAGATCTACCCGCGCATCGCACGTGTGCGTAGCGGCGAAGAGGTCCTc                                                                                               >  2:2637820/1‑93 (MQ=255)

 ccTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCa                                                                                              >  2:4401728/1‑93 (MQ=255)

   tGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGAGGAAGAGATCCTCAAc                                                                                            >  1:2466212/1‑93 (MQ=255)

    gTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAAcg                                                                                           >  2:1409311/1‑93 (MQ=255)

     tAGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCAcgc                                                                                          >  1:3314500/1‑93 (MQ=255)

       gTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGt                                                                                        >  1:5309802/1‑93 (MQ=255)

       gTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGt                                                                                        >  2:1358173/1‑93 (MQ=255)

        tGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGtt                                                                                       <  2:4681348/93‑1 (MQ=255)

        tGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGtt                                                                                       >  1:6009064/1‑93 (MQ=255)

        tGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGtt                                                                                       >  1:988814/1‑93 (MQ=255)

        tGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGtt                                                                                       <  2:3792162/93‑1 (MQ=255)

            gccAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGa                                                                                   <  1:3731880/93‑1 (MQ=255)

            gccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGa                                                                                   <  1:3403970/93‑1 (MQ=255)

            gccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGa                                                                                   <  2:192540/93‑1 (MQ=255)

             ccAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAt                                                                                  >  1:2694504/1‑93 (MQ=255)

             ccAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAt                                                                                  <  1:1646920/93‑1 (MQ=255)

                gcgcCGAGCAACACAATAACAGCATTAATCATAGCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTa                                                                               <  2:5937633/93‑1 (MQ=255)

                   ccGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAt                                                                            >  1:363980/1‑93 (MQ=255)

                     gAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCg                                                                          >  1:4523542/1‑93 (MQ=255)

                     gAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCg                                                                          <  1:506008/93‑1 (MQ=255)

                     gAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCg                                                                          >  2:3295748/1‑93 (MQ=255)

                       gcaacaCAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGCGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGt                                                                        <  2:78238/93‑1 (MQ=255)

                        caacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTc                                                                       <  2:3617424/90‑1 (MQ=255)

                        caacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTc                                                                       <  1:1001413/90‑1 (MQ=255)

                        caacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTc                                                                       <  2:2080578/90‑1 (MQ=255)

                         aacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCt                                                                      >  1:2526304/3‑93 (MQ=255)

                         aacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCt                                                                      <  2:1101445/91‑1 (MQ=255)

                         aacacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCt                                                                      <  2:64237/91‑1 (MQ=255)

                          acacaATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCtg                                                                     >  1:4106912/2‑92 (MQ=255)

                           cacaATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTAc                                                                    <  1:4976843/93‑1 (MQ=255)

                            acaATAACAGCATTACTCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGCTTTACATCGGTCTAcc                                                                   <  1:5481195/93‑1 (MQ=255)

                              aaTAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGc                                                                 >  1:562527/1‑93 (MQ=255)

                               aTAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCa                                                                >  1:2276012/1‑93 (MQ=255)

                                tAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCaa                                                               >  2:2831670/1‑93 (MQ=255)

                                 aaCAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAAt                                                              >  1:5200052/1‑93 (MQ=255)

                                   cAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGCAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATgg                                                            <  1:4184678/93‑1 (MQ=255)

                                       aTCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGc                                                        >  2:2161611/1‑93 (MQ=255)

                                        tCAGCCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCa                                                       <  1:5837806/93‑1 (MQ=255)

                                         taatcATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCAt                                                      >  2:73990/5‑93 (MQ=255)

                                         taatcATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCAt                                                      <  1:2870243/89‑1 (MQ=255)

                                          aatcATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATc                                                     <  2:5404844/90‑1 (MQ=255)

                                           aCCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATcc                                                    >  1:4400584/1‑93 (MQ=255)

                                           aCCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATcc                                                    <  1:4267920/93‑1 (MQ=255)

                                            ccATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCt                                                   >  2:166393/1‑93 (MQ=255)

                                             cATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTa                                                  <  2:5181746/93‑1 (MQ=255)

                                             cATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTa                                                  >  1:1089758/1‑93 (MQ=255)

                                             cATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTa                                                  >  1:3191016/1‑93 (MQ=255)

                                               tatCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTaaa                                                >  2:2529704/1‑93 (MQ=255)

                                               tatCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTaaa                                                <  2:4249160/93‑1 (MQ=255)

                                               tatCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTaaa                                                <  1:2354942/93‑1 (MQ=255)

                                               tatCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTaaa                                                >  2:1277546/1‑93 (MQ=255)

                                                   tACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATggg                                            >  2:229231/1‑93 (MQ=255)

                                                   tACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATggg                                            <  1:1860266/93‑1 (MQ=255)

                                                    aCCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATgggg                                           >  1:1201859/1‑92 (MQ=255)

                                                     cccGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTg                                          >  1:3545024/1‑93 (MQ=255)

                                                     cccGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTg                                          <  2:3489987/93‑1 (MQ=255)

                                                      ccGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGc                                         <  2:5279783/93‑1 (MQ=255)

                                                      ccGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGc                                         >  2:3960977/1‑93 (MQ=255)

                                                      ccGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGc                                         >  1:3492415/1‑93 (MQ=255)

                                                       cgcgCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCg                                        >  2:5622812/1‑93 (MQ=255)

                                                       cgcgCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCg                                        >  2:3381483/1‑93 (MQ=255)

                                                       cgcgCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCg                                        <  2:3190331/93‑1 (MQ=255)

                                                        gcgcATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCgt                                       >  1:3114568/1‑92 (MQ=255)

                                                         cgcATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGt                                      <  2:895219/93‑1 (MQ=255)

                                                         cgcATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGt                                      <  2:1542170/93‑1 (MQ=255)

                                                         cgcATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGt                                      >  1:6092082/1‑93 (MQ=255)

                                                          gcATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGtt                                     >  2:3092592/1‑93 (MQ=255)

                                                          gcATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGtt                                     >  1:1803562/1‑93 (MQ=255)

                                                          gcATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGtt                                     >  1:3824324/1‑93 (MQ=255)

                                                          gcATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGtt                                     >  2:175179/1‑93 (MQ=255)

                                                            aTCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTgg                                   >  1:1442945/1‑93 (MQ=255)

                                                             tCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTggg                                  <  1:1563947/93‑1 (MQ=255)

                                                             tCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTggg                                  <  2:5670398/93‑1 (MQ=255)

                                                                 ccGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATc                              >  1:2798357/1‑93 (MQ=255)

                                                                   gtgtGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCAc                            >  2:4903417/1‑93 (MQ=255)

                                                                    tgtgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCAcc                           >  1:1948767/1‑93 (MQ=255)

                                                                    tgtgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCAcc                           >  2:5014586/1‑93 (MQ=255)

                                                                    ggtgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCAcc                           <  1:1356310/92‑1 (MQ=255)

                                                                      tgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAg                         <  2:6071380/93‑1 (MQ=255)

                                                                         gTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCt                      >  2:3700711/1‑93 (MQ=255)

                                                                         gTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCt                      >  1:206038/1‑93 (MQ=255)

                                                                              gTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAag                 >  2:4541065/1‑93 (MQ=255)

                                                                               tGGAAGAGATCCTTCACGCTTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAaga                <  1:2993388/93‑1 (MQ=255)

                                                                               tGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAaga                <  2:4807115/93‑1 (MQ=255)

                                                                               tGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTCAATGGGTGCGGTTGGGGATCACCAGCCTTGAaga                >  2:2977387/1‑93 (MQ=255)

                                                                               tGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAaga                <  1:4834548/93‑1 (MQ=255)

                                                                                ggAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAagag               >  2:5789025/1‑93 (MQ=255)

                                                                                ggAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAagag               <  2:4148018/93‑1 (MQ=255)

                                                                                  aaGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTa             <  1:4696007/93‑1 (MQ=255)

                                                                                  aaGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTa             <  2:549488/93‑1 (MQ=255)

                                                                                  aaGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTa             <  1:690361/93‑1 (MQ=255)

                                                                                  aaGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAACCTTGAAGAGTa             <  1:5396749/93‑1 (MQ=255)

                                                                                  aaGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTa             <  1:2165895/93‑1 (MQ=255)

                                                                                   agatATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAt            <  2:1835789/93‑1 (MQ=255)

                                                                                   agagATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAt            <  1:911419/93‑1 (MQ=255)

                                                                                    gagaTCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATg           <  1:5721804/93‑1 (MQ=255)

                                                                                    gagaTCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTCAAGAGTATg           >  2:1196560/1‑93 (MQ=255)

                                                                                     agaTCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGc          >  1:3926228/1‑93 (MQ=255)

                                                                                      gaTCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGcc         <  2:5110330/93‑1 (MQ=255)

                                                                                          cTCCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGcc     <  1:2632954/93‑1 (MQ=255)

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GCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACT  >  NC_000913/1949318‑1949503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 539 total aligned reads displayed.

CGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACT  >  NC_000913/1949317‑1949503

 GCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCA                                                                                              >  SRR4302532.2781387/1‑94 (MQ=60)

   CTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGAGGAAGAGATCCTCAAC                                                                                            >  SRR4302532.2548310/1‑94 (MQ=60)

    TGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACG                                                                                           >  SRR4302532.2883301/1‑94 (MQ=60)

    TGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACG                                                                                           <  SRR4302532.1460401/94‑1 (MQ=60)

       AGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGT                                                                                        >  SRR4302532.4198628/1‑94 (MQ=60)

       AGTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGT                                                                                        >  SRR4302532.4871964/1‑94 (MQ=60)

        GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                                                                                       >  SRR4302532.3325655/1‑94 (MQ=60)

        GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                                                                                       >  SRR4302532.2505157/1‑94 (MQ=60)

        GTGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTT                                                                                       >  SRR4302532.6216572/1‑94 (MQ=60)

         TGCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTA                                                                                      >  SRR4302532.4278083/1‑94 (MQ=60)

          GCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTAT                                                                                     <  SRR4302532.3622576/94‑1 (MQ=60)

          GCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTAT                                                                                     <  SRR4302532.3118758/94‑1 (MQ=60)

          GCCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTAT                                                                                     <  SRR4302532.1078161/94‑1 (MQ=60)

           CCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATG                                                                                    <  SRR4302532.2200902/94‑1 (MQ=60)

           CCGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATG                                                                                    <  SRR4302532.2519201/94‑1 (MQ=60)

            CGCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGA                                                                                   >  SRR4302532.1692895/1‑94 (MQ=60)

             GCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAT                                                                                  >  SRR4302532.2785004/1‑94 (MQ=60)

             GCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGAT                                                                                  <  SRR4302532.3857249/94‑1 (MQ=60)

             GCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAT                                                                                  <  SRR4302532.4721262/94‑1 (MQ=60)

             GCCAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGAT                                                                                  <  SRR4302532.536768/94‑1 (MQ=60)

               CAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTT                                                                                <  SRR4302532.4994911/94‑1 (MQ=60)

               CAGCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTT                                                                                <  SRR4302532.202533/94‑1 (MQ=60)

                 GCGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTAC                                                                              <  SRR4302532.1041951/94‑1 (MQ=60)

                  CGCTGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACA                                                                             >  SRR4302532.5657649/1‑94 (MQ=60)

                  CGCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTGGCGTGGAAGAGATCCTTCACGCGTTATGATTTACA                                                                             >  SRR4302532.3278282/1‑94 (MQ=60)

                   GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT                                                                            <  SRR4302532.4071300/94‑1 (MQ=60)

                   GCCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACAT                                                                            <  SRR4302532.1126455/94‑1 (MQ=60)

                    CCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATC                                                                           <  SRR4302532.1134066/94‑1 (MQ=60)

                    CCGAGCAGCACAATAACAGTATCAACCATATCTACCCGAGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATC                                                                           <  SRR4302532.3630307/94‑1 (MQ=60)

                    CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC                                                                           >  SRR4302532.637273/1‑94 (MQ=60)

                    CCGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATC                                                                           <  SRR4302532.3852993/94‑1 (MQ=60)

                     CGAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCG                                                                          <  SRR4302532.1220134/94‑1 (MQ=60)

                      GAGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGG                                                                         <  SRR4302532.523701/94‑1 (MQ=60)

                       AGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGT                                                                        <  SRR4302532.802439/94‑1 (MQ=60)

                       AGCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGT                                                                        <  SRR4302532.370048/94‑1 (MQ=60)

                        GCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTC                                                                       <  SRR4302532.1927898/94‑1 (MQ=60)

                        GCAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTC                                                                       <  SRR4302532.1427292/94‑1 (MQ=60)

                         CAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCT                                                                      <  SRR4302532.5795874/94‑1 (MQ=60)

                         CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT                                                                      <  SRR4302532.4402225/94‑1 (MQ=60)

                         CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT                                                                      <  SRR4302532.2902915/94‑1 (MQ=60)

                         CAACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCT                                                                      <  SRR4302532.2278272/94‑1 (MQ=60)

                          ACCACAATAACAGCATTAATCATATCTACCCGCGCATCCCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG                                                                     <  SRR4302532.4823087/94‑1 (MQ=60)

                          AACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG                                                                     >  SRR4302532.4615047/1‑94 (MQ=60)

                          AACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG                                                                     >  SRR4302532.604592/1‑94 (MQ=60)

                           GCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTAC                                                                    >  SRR4302532.284743/1‑94 (MQ=60)

                           ACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGC                                                                    >  SRR4302532.3554623/1‑94 (MQ=60)

                             ACAATAACAGTATCAACCATATCTACCCGCGCCTCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCG                                                                  >  SRR4302532.3094497/1‑94 (MQ=60)

                             ACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCG                                                                  >  SRR4302532.5622384/1‑94 (MQ=60)

                             ACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCG                                                                  <  SRR4302532.5569919/94‑1 (MQ=60)

                             ACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCG                                                                  >  SRR4302532.6186121/1‑94 (MQ=60)

                              CAATAGCAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGC                                                                 >  SRR4302532.5437095/1‑94 (MQ=60)

                              CAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGC                                                                 >  SRR4302532.6109590/1‑94 (MQ=60)

                              CAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGC                                                                 >  SRR4302532.2382428/1‑94 (MQ=60)

                              CAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGC                                                                 <  SRR4302532.3433337/94‑1 (MQ=60)

                              CAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGC                                                                 >  SRR4302532.582134/1‑94 (MQ=60)

                               AATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCA                                                                <  SRR4302532.3020643/94‑1 (MQ=60)

                               AATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCA                                                                >  SRR4302532.4320926/1‑94 (MQ=60)

                               AATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCA                                                                >  SRR4302532.1891576/1‑94 (MQ=60)

                               AATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCA                                                                >  SRR4302532.5905133/1‑94 (MQ=60)

                                ATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAA                                                               >  SRR4302532.2219381/1‑94 (MQ=60)

                                 TAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAAT                                                              >  SRR4302532.5379355/1‑94 (MQ=60)

                                 TAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAAT                                                              <  SRR4302532.1801101/94‑1 (MQ=60)

                                   ACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGG                                                            >  SRR4302532.5125703/1‑94 (MQ=60)

                                    cagcattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGT                                                           <  SRR4302532.3896341/84‑1 (MQ=60)

                                    cagcattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGT                                                           >  SRR4302532.3543817/11‑94 (MQ=60)

                                    cagcattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGT                                                           <  SRR4302532.3408746/84‑1 (MQ=60)

                                     agcattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTC                                                          >  SRR4302532.3454835/10‑94 (MQ=60)

                                     agcattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTC                                                          >  SRR4302532.6262205/10‑94 (MQ=60)

                                     agcattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTC                                                          >  SRR4302532.6236447/10‑94 (MQ=60)

                                     agcattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTC                                                          <  SRR4302532.3151619/85‑1 (MQ=60)

                                     agaattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTC                                                          <  SRR4302532.4697065/85‑1 (MQ=60)

                                      gcattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCG                                                         <  SRR4302532.2819206/86‑1 (MQ=60)

                                      gcattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCG                                                         <  SRR4302532.4552146/86‑1 (MQ=60)

                                      gcattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCG                                                         >  SRR4302532.5601752/9‑94 (MQ=60)

                                      GTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCG                                                         <  SRR4302532.5765990/94‑1 (MQ=60)

                                       cattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGC                                                        >  SRR4302532.867742/8‑94 (MQ=60)

                                        ATTAATCATATCTACCCGTGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCA                                                       <  SRR4302532.4270331/94‑1 (MQ=60)

                                        ATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCA                                                       >  SRR4302532.3380456/1‑94 (MQ=60)

                                        ATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCA                                                       <  SRR4302532.3612175/94‑1 (MQ=60)

                                        ATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGCTATGATTTACATCGGTCTGCCGCAATGGTCGCA                                                       >  SRR4302532.790137/1‑94 (MQ=60)

                                         TCAGCCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCAT                                                      <  SRR4302532.6040429/94‑1 (MQ=60)

                                          CAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATC                                                     <  SRR4302532.5089596/94‑1 (MQ=60)

                                           AATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCC                                                    >  SRR4302532.344440/1‑94 (MQ=60)

                                           AATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCC                                                    >  SRR4302532.1400083/1‑94 (MQ=60)

                                            ATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT                                                   >  SRR4302532.2097671/1‑94 (MQ=60)

                                            ATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT                                                   <  SRR4302532.2653072/94‑1 (MQ=60)

                                            ATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT                                                   <  SRR4302532.3704686/94‑1 (MQ=60)

                                            ATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT                                                   >  SRR4302532.5157459/1‑94 (MQ=60)

                                            ACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCT                                                   >  SRR4302532.1403651/1‑94 (MQ=60)

                                              CATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAA                                                 >  SRR4302532.3592673/1‑94 (MQ=60)

                                              CATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAA                                                 <  SRR4302532.3511029/94‑1 (MQ=60)

                                              CATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAA                                                 <  SRR4302532.3968148/94‑1 (MQ=60)

                                              CATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATACTTCACGCGTTATGATTTACATCGGGCTGCCGCAATGGTTGCATCCTAA                                                 >  SRR4302532.4410949/1‑94 (MQ=60)

                                               ATATCTACCTGCGCATCGCCCGTTTGCGTGGCGTGGTAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATAGTCCCATCCTAAA                                                >  SRR4302532.3234323/1‑94 (MQ=60)

                                               ATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAA                                                >  SRR4302532.1867705/1‑94 (MQ=60)

                                               ATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAA                                                <  SRR4302532.2183142/94‑1 (MQ=60)

                                               ATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAA                                                >  SRR4302532.975671/1‑94 (MQ=60)

                                                TATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAAT                                               <  SRR4302532.3391641/94‑1 (MQ=60)

                                                TATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAAT                                               <  SRR4302532.302466/94‑1 (MQ=60)

                                                TATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAAT                                               <  SRR4302532.4427808/94‑1 (MQ=60)

                                                TATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAAT                                               >  SRR4302532.6333560/1‑94 (MQ=60)

                                                 TTCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATG                                              <  SRR4302532.3982119/94‑1 (MQ=60)

                                                 ATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATG                                              >  SRR4302532.2666584/1‑94 (MQ=60)

                                                  TCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGG                                             <  SRR4302532.2581429/94‑1 (MQ=60)

                                                  TCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGG                                             >  SRR4302532.1845584/1‑94 (MQ=60)

                                                   CTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGG                                            >  SRR4302532.465395/1‑94 (MQ=60)

                                                   CTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGG                                            >  SRR4302532.1898857/1‑94 (MQ=60)

                                                   CTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGG                                            <  SRR4302532.5866194/94‑1 (MQ=60)

                                                    TACCCGCGCATCGCCCGTGTGTGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACACCGGTCTGCCGCAATGGTCGCATCCTAAATGGGT                                           <  SRR4302532.4002042/94‑1 (MQ=60)

                                                    TACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGT                                           <  SRR4302532.4210470/94‑1 (MQ=60)

                                                    TACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGT                                           <  SRR4302532.1921928/94‑1 (MQ=60)

                                                    TACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGT                                           <  SRR4302532.16385/94‑1 (MQ=60)

                                                    TACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGT                                           <  SRR4302532.1515219/94‑1 (MQ=60)

                                                    TACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGT                                           <  SRR4302532.1352462/94‑1 (MQ=60)

                                                    TACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGG                                           >  SRR4302532.1242057/1‑94 (MQ=60)

                                                    TACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGT                                           <  SRR4302532.2254333/94‑1 (MQ=60)

                                                     ACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCACTGGTCGCATCCTAAATGGGTG                                          >  SRR4302532.5474034/1‑94 (MQ=60)

                                                     ACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTG                                          >  SRR4302532.5177119/1‑94 (MQ=60)

                                                     ACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTG                                          <  SRR4302532.5025572/94‑1 (MQ=60)

                                                      CCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGC                                         <  SRR4302532.1306952/94‑1 (MQ=60)

                                                      CCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGC                                         <  SRR4302532.681469/94‑1 (MQ=60)

                                                      CCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGC                                         >  SRR4302532.6301137/1‑94 (MQ=60)

                                                      CCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGC                                         <  SRR4302532.2954580/94‑1 (MQ=60)

                                                      CCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATACTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGACGCATCCTAAATGGGTGC                                         >  SRR4302532.4328742/1‑94 (MQ=60)

                                                        CGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGG                                       <  SRR4302532.4778220/94‑1 (MQ=60)

                                                          CGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTT                                     >  SRR4302532.494534/1‑94 (MQ=60)

                                                          CGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTT                                     <  SRR4302532.2405841/94‑1 (MQ=60)

                                                          CGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTT                                     >  SRR4302532.2420894/1‑94 (MQ=60)

                                                          CGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTT                                     <  SRR4302532.1112110/94‑1 (MQ=60)

                                                           GCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTG                                    <  SRR4302532.2894019/94‑1 (MQ=60)

                                                           GCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTG                                    <  SRR4302532.3529253/94‑1 (MQ=60)

                                                            CATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGG                                   >  SRR4302532.2159029/1‑94 (MQ=60)

                                                            CATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGG                                   >  SRR4302532.1729533/1‑94 (MQ=60)

                                                             ATCGCCCGTGTGGGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCACTGGTCGCATCCTAAATCGGTGCGATTGGG                                  >  SRR4302532.1991702/1‑94 (MQ=60)

                                                             ATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGG                                  >  SRR4302532.4532746/1‑94 (MQ=60)

                                                             ATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATGTACATCGGTCTGCCGCAATGGTCGCATCCGAAATGGGTGCGGGTGGG                                  >  SRR4302532.5681600/1‑94 (MQ=60)

                                                             ATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGG                                  <  SRR4302532.1546649/94‑1 (MQ=60)

                                                              TCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGT                                 <  SRR4302532.1616844/94‑1 (MQ=60)

                                                              TCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGT                                 >  SRR4302532.2743604/1‑94 (MQ=60)

                                                               CGCCCGTGTGCGTAGGGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTACATGGGTGTGGTTGGGTA                                >  SRR4302532.317115/1‑94 (MQ=60)

                                                               CGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGA                                <  SRR4302532.1011129/94‑1 (MQ=60)

                                                               CGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGA                                >  SRR4302532.4437174/1‑94 (MQ=60)

                                                                GCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTAT                               <  SRR4302532.5924009/94‑1 (MQ=60)

                                                                GCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTAT                               >  SRR4302532.3049818/1‑94 (MQ=60)

                                                                GCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTAT                               >  SRR4302532.5996201/1‑94 (MQ=60)

                                                                GCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTAT                               >  SRR4302532.6282254/1‑94 (MQ=60)

                                                                CCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTAT                               <  SRR4302532.5076513/94‑1 (MQ=60)

                                                                 CCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATC                              >  SRR4302532.2574353/1‑94 (MQ=60)

                                                                 CCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATC                              >  SRR4302532.3789169/1‑94 (MQ=60)

                                                                  CCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCA                             >  SRR4302532.276517/1‑94 (MQ=60)

                                                                  CCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCA                             >  SRR4302532.4451881/1‑94 (MQ=60)

                                                                   CGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCAC                            <  SRR4302532.4248299/94‑1 (MQ=60)

                                                                   CGTGTGCGTAGCGTGGAAGAGATCCACAACGCGTTATGATTTACATCGGCCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCAC                            <  SRR4302532.5533497/94‑1 (MQ=60)

                                                                    GTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACC                           >  SRR4302532.2037123/1‑94 (MQ=60)

                                                                     TGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCA                          <  SRR4302532.102334/94‑1 (MQ=60)

                                                                     TGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCA                          <  SRR4302532.1001263/94‑1 (MQ=60)

                                                                      GTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAG                         <  SRR4302532.2011499/94‑1 (MQ=60)

                                                                      GTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAG                         <  SRR4302532.5333679/94‑1 (MQ=60)

                                                                      GTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAG                         <  SRR4302532.1789581/94‑1 (MQ=60)

                                                                         CGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCT                      >  SRR4302532.213078/1‑94 (MQ=60)

                                                                         CGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCT                      >  SRR4302532.3864815/1‑94 (MQ=60)

                                                                         CGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCT                      <  SRR4302532.3758273/94‑1 (MQ=60)

                                                                         CGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCT                      <  SRR4302532.2594947/94‑1 (MQ=60)

                                                                           TAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTG                    <  SRR4302532.5401521/94‑1 (MQ=60)

                                                                            AGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTTA                   >  SRR4302532.235448/1‑94 (MQ=60)

                                                                            AGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGA                   <  SRR4302532.5269812/94‑1 (MQ=60)

                                                                            AGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGA                   >  SRR4302532.3951620/1‑94 (MQ=60)

                                                                             GCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAA                  <  SRR4302532.37705/94‑1 (MQ=60)

                                                                             GCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAA                  <  SRR4302532.5204015/94‑1 (MQ=60)

                                                                             GCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAA                  <  SRR4302532.563042/94‑1 (MQ=60)

                                                                              CGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAG                 <  SRR4302532.3648562/94‑1 (MQ=60)

                                                                              CGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAG                 <  SRR4302532.3007294/94‑1 (MQ=60)

                                                                              CGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAG                 >  SRR4302532.5976458/1‑94 (MQ=60)

                                                                               GTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGA                >  SRR4302532.3254766/1‑94 (MQ=60)

                                                                               GTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGA                >  SRR4302532.1590981/1‑94 (MQ=60)

                                                                               GTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGA                >  SRR4302532.2672947/1‑94 (MQ=60)

                                                                               GAGGAAGAGATCCTTCACGCGTTATGATTTACATCGGGCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGCATCACCAGCCTTGCAGA                >  SRR4302532.3481805/1‑94 (MQ=60)

                                                                                TGGAAGATATCCTTTACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAG               <  SRR4302532.4635413/94‑1 (MQ=60)

                                                                                TGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAG               <  SRR4302532.3275093/94‑1 (MQ=60)

                                                                                TGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAG               >  SRR4302532.293304/1‑94 (MQ=60)

                                                                                TGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAG               >  SRR4302532.3797814/1‑94 (MQ=60)

                                                                                 GGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGT              <  SRR4302532.2621625/94‑1 (MQ=60)

                                                                                  GAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTA             >  SRR4302532.4164028/1‑94 (MQ=60)

                                                                                  GAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTA             >  SRR4302532.3213978/1‑94 (MQ=60)

                                                                                   AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT            <  SRR4302532.5528552/94‑1 (MQ=60)

                                                                                   AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT            <  SRR4302532.848992/94‑1 (MQ=60)

                                                                                   AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT            <  SRR4302532.2337145/94‑1 (MQ=60)

                                                                                   AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT            <  SRR4302532.4955317/94‑1 (MQ=60)

                                                                                   AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT            <  SRR4302532.2470737/94‑1 (MQ=60)

                                                                                   AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT            >  SRR4302532.1641714/1‑94 (MQ=60)

                                                                                   AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT            <  SRR4302532.1486278/94‑1 (MQ=60)

                                                                                    ATAGATCCTCATCGCGTGATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGCATG           <  SRR4302532.5859526/94‑1 (MQ=60)

                                                                                    AGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATG           <  SRR4302532.942554/94‑1 (MQ=60)

                                                                                     GAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGC          <  SRR4302532.729236/94‑1 (MQ=60)

                                                                                     GAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGC          >  SRR4302532.4058507/1‑94 (MQ=60)

                                                                                       GATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCC        >  SRR4302532.5709469/1‑94 (MQ=60)

                                                                                        ATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCG       >  SRR4302532.5557511/1‑94 (MQ=60)

                                                                                        ATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCG       >  SRR4302532.4363601/1‑94 (MQ=60)

                                                                                           CTCCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCA    <  SRR4302532.2721169/94‑1 (MQ=60)

                                                                                           CTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCA    >  SRR4302532.1172422/1‑94 (MQ=60)

CGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACT  >  NC_000913/1949317‑1949503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`