Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	521	238.2	12299412	96.0%	11807435	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,949,436	A→G	L6L (CTA→CTG)	yecE →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,949,436	0	A	G	75.7%	1502.4 / inf	811	L6L (CTA→CTG)	yecE	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (125/72); new base G (342/272); total (467/344)
Fisher's exact test for biased strand distribution p-value = 5.72e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01

Only 100 of 882 total aligned reads displayed.

GCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCA  >  NC_000913/1949344‑1949527

gcaCAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTa                                                                                             >  2:3279564/1‑93 (MQ=255)

 cacaATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTAc                                                                                            <  1:4976843/93‑1 (MQ=255)

   caATAACAGTATCAACCATATCTACCCGCGCCTCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCg                                                                                          >  1:2995530/1‑93 (MQ=255)

   caATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCg                                                                                          >  2:2467904/1‑93 (MQ=255)

    aaTAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGc                                                                                         >  1:1387053/1‑93 (MQ=255)

    aaTAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGc                                                                                         >  2:6044903/1‑93 (MQ=255)

     aTAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCa                                                                                        >  1:5740027/1‑93 (MQ=255)

      tAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCaa                                                                                       <  2:5561797/93‑1 (MQ=255)

      tAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCaa                                                                                       >  2:1278741/1‑93 (MQ=255)

         cAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATgg                                                                                    <  1:3769473/93‑1 (MQ=255)

         cAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATgg                                                                                    <  2:43951/93‑1 (MQ=255)

                 atcATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATcc                                                                            <  1:2567369/91‑1 (MQ=255)

                 aCCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATcc                                                                            >  2:2099636/1‑93 (MQ=255)

                 aCCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATcc                                                                            <  1:4267920/93‑1 (MQ=255)

                  tcATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCt                                                                           >  2:5515653/2‑93 (MQ=255)

                   cATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTa                                                                          >  2:1933219/1‑93 (MQ=255)

                   cATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTa                                                                          <  1:3397307/93‑1 (MQ=255)

                   cATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTa                                                                          >  1:1089758/1‑93 (MQ=255)

                    atatCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTaa                                                                         >  2:841923/1‑93 (MQ=255)

                    atatCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTaa                                                                         >  1:365480/1‑93 (MQ=255)

                    atatCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTaa                                                                         >  1:5227540/1‑93 (MQ=255)

                     tatCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTaaa                                                                        <  1:2314594/93‑1 (MQ=255)

                     tatCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTaaa                                                                        >  2:4937792/1‑93 (MQ=255)

                     tatCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTaaa                                                                        <  2:3590657/93‑1 (MQ=255)

                     tatCTACCCGCGCATCGCCCGTGCGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTaaa                                                                        >  2:3731454/1‑93 (MQ=255)

                      atCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAAt                                                                       <  2:1357093/93‑1 (MQ=255)

                      atCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAAt                                                                       <  2:5244378/93‑1 (MQ=255)

                      atCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAAt                                                                       >  1:6122277/1‑93 (MQ=255)

                       tCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATg                                                                      >  2:3061972/1‑93 (MQ=255)

                         tACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATggg                                                                    >  2:169576/1‑93 (MQ=255)

                         tACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATggg                                                                    <  1:4073668/93‑1 (MQ=255)

                         tACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAGTGGTCGCATCCTAAAgggg                                                                    >  2:5302391/1‑93 (MQ=255)

                         tACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATggg                                                                    <  2:688554/93‑1 (MQ=255)

                         tACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATggg                                                                    >  2:4527604/1‑93 (MQ=255)

                          aCCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGt                                                                   >  2:404622/1‑93 (MQ=255)

                          aCCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGt                                                                   <  1:4858424/93‑1 (MQ=255)

                           cccGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTg                                                                  <  2:3489987/93‑1 (MQ=255)

                           cccGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTg                                                                  >  1:3545024/1‑93 (MQ=255)

                           cccGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTg                                                                  <  1:1264650/93‑1 (MQ=255)

                            ccGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGc                                                                 <  2:3403137/93‑1 (MQ=255)

                                gcATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGtt                                                             >  1:477870/1‑93 (MQ=255)

                                gcATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATTGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGtt                                                             <  1:5408806/93‑1 (MQ=255)

                                gcATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGtt                                                             >  2:175179/1‑93 (MQ=255)

                                  aTCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTgg                                                           >  1:2089343/1‑93 (MQ=255)

                                   tCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTggg                                                          >  1:1007517/1‑93 (MQ=255)

                                   tCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTggg                                                          >  1:4383807/1‑93 (MQ=255)

                                   tCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTggg                                                          >  1:4185222/1‑93 (MQ=255)

                                   tCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTggg                                                          >  2:1576704/1‑93 (MQ=255)

                                    cGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTgggt                                                         <  2:6098438/93‑2 (MQ=255)

                                     gCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTgggta                                                        <  1:2666655/93‑3 (MQ=255)

                                     gCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTgggta                                                        <  2:1849759/93‑3 (MQ=255)

                                      cccGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTAt                                                       <  1:3489242/93‑1 (MQ=255)

                                      cccGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGAt                                                       >  2:5050194/1‑93 (MQ=255)

                                       ccGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATc                                                      >  2:2200978/1‑93 (MQ=255)

                                        cGTGTGCGTCGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATcc                                                     >  1:3847206/1‑92 (MQ=255)

                                        cGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCa                                                     >  2:1490576/1‑93 (MQ=255)

                                         gtgtGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCAc                                                    >  1:5862253/1‑93 (MQ=255)

                                          tgtgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCAcc                                                   <  1:98900/93‑1 (MQ=255)

                                           gtgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCa                                                  <  1:280089/93‑1 (MQ=255)

                                           gtgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCa                                                  <  2:2307121/93‑1 (MQ=255)

                                           gtgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCa                                                  <  1:1946771/93‑1 (MQ=255)

                                           gtgCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCa                                                  >  2:5910595/1‑93 (MQ=255)

                                            tgCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAg                                                 >  2:5406953/1‑93 (MQ=255)

                                              cttAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGcc                                               <  2:4865230/91‑1 (MQ=255)

                                                 aGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTg                                            <  2:3680602/93‑1 (MQ=255)

                                                  tcGTGTAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGa                                           <  1:564183/92‑1 (MQ=255)

                                                   cGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGaa                                          <  1:2910244/93‑1 (MQ=255)

                                                     tGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAaga                                        >  1:3150245/1‑93 (MQ=255)

                                                     tGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAaga                                        >  2:3140506/1‑93 (MQ=255)

                                                     tGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAaga                                        >  2:1233117/1‑93 (MQ=255)

                                                     tGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTCAATGGGTGCGGTTGGGGATCACCAGCCTTGAaga                                        >  2:2977387/1‑93 (MQ=255)

                                                       gAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGt                                      >  1:5057973/1‑93 (MQ=255)

                                                        aaGAGATCCTTCACTCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTa                                     <  2:4766564/93‑1 (MQ=255)

                                                        aaGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTa                                     <  1:2501097/93‑1 (MQ=255)

                                                        aaGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTa                                     <  2:269507/93‑1 (MQ=255)

                                                        aaGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTa                                     <  2:5646625/93‑1 (MQ=255)

                                                        aaGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTa                                     <  1:5343183/93‑1 (MQ=255)

                                                        aaGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTa                                     <  1:2391079/93‑1 (MQ=255)

                                                         agagATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAt                                    <  1:911419/93‑1 (MQ=255)

                                                         agagATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTAt                                    <  1:4544738/93‑1 (MQ=255)

                                                          gagaTCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATg                                   >  2:2583323/1‑93 (MQ=255)

                                                           agaTCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGc                                  >  1:1835162/1‑93 (MQ=255)

                                                           agaTCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGc                                  >  1:3926228/1‑93 (MQ=255)

                                                                   caCGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACt                          <  1:5548709/92‑1 (MQ=255)

                                                                   aaCGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACt                          >  2:4204538/1‑93 (MQ=255)

                                                                     cgcgTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACttt                        >  2:3235824/1‑93 (MQ=255)

                                                                      gcgTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTa                       >  1:2208997/1‑93 (MQ=255)

                                                                      gcgTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTa                       >  1:1492519/1‑93 (MQ=255)

                                                                       ctttATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTGGGGTACCACCAGCCTTGAAGAGTATGCCCGCCACTTTaa                      <  2:1156469/91‑1 (MQ=255)

                                                                       ctttATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAAGGGGGGCGGTTGGGTACCCCCAGCCTTGAAGAGTATGCCCGCCACTTTaa                      <  2:2824541/91‑1 (MQ=255)

                                                                       cgTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTaa                      <  1:6035371/93‑1 (MQ=255)

                                                                        gTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAAc                     >  2:5130650/1‑93 (MQ=255)

                                                                         ttATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACt                    >  1:3265914/1‑93 (MQ=255)

                                                                         ttATGATTTACATCGGTCTGCCGAAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAAcg                    >  1:1601697/1‑92 (MQ=255)

                                                                           aTGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGc                  >  2:750226/1‑93 (MQ=255)

                                                                            tGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCg                 >  1:1738404/1‑93 (MQ=255)

                                                                               tttACATCGTTCTGCCGCAGTGGTCGCATCCTAAATGGGTGGGGTTGGGTACCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTga              <  2:5710337/93‑2 (MQ=255)

                                                                                 tACATCGGTCTACCGCAATGGTCGCATCCTAAAGGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAg            <  2:4622827/93‑1 (MQ=255)

                                                                                  aCATCGGTCTCCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTgacgc           <  2:3857591/93‑5 (MQ=255)

                                                                                     tCGGTCTACCGCAATGGTCGCATCCAAAGGGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCa        <  1:74803/93‑1 (MQ=255)

GCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCA  >  NC_000913/1949344‑1949527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 542 total aligned reads displayed.

AGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACG  >  NC_000913/1949343‑1949529

AACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG                                                                                               >  SRR4302532.5089955/1‑94 (MQ=60)

AACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTG                                                                                               <  SRR4302532.2404370/94‑1 (MQ=60)

 ACACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGC                                                                                              >  SRR4302532.1619573/1‑94 (MQ=60)

   ACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCG                                                                                            <  SRR4302532.111832/94‑1 (MQ=60)

   ACAATAACAGCATTACTCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGCTTTACATCGGTCTACCG                                                                                            <  SRR4302532.5671242/94‑1 (MQ=60)

   ACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTGTGATTTACATCGGTCTGCCG                                                                                            >  SRR4302532.4595547/1‑94 (MQ=60)

   ACAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCG                                                                                            >  SRR4302532.5622384/1‑94 (MQ=60)

    CAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGC                                                                                           >  SRR4302532.6109590/1‑94 (MQ=60)

    CAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGC                                                                                           >  SRR4302532.1433532/1‑94 (MQ=60)

    CAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGC                                                                                           >  SRR4302532.630624/1‑94 (MQ=60)

    CAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGC                                                                                           <  SRR4302532.3433337/94‑1 (MQ=60)

    CAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGC                                                                                           >  SRR4302532.310471/1‑94 (MQ=60)

    CAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGC                                                                                           >  SRR4302532.4883809/1‑94 (MQ=60)

    CAATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGC                                                                                           >  SRR4302532.2573660/1‑94 (MQ=60)

     AATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCA                                                                                          >  SRR4302532.4630854/1‑94 (MQ=60)

     AATAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCA                                                                                          >  SRR4302532.1891576/1‑94 (MQ=60)

       TAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAAT                                                                                        >  SRR4302532.5379355/1‑94 (MQ=60)

       TAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAAT                                                                                        <  SRR4302532.3704140/94‑1 (MQ=60)

       TAACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAAT                                                                                        <  SRR4302532.1801101/94‑1 (MQ=60)

         ACAGCATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGG                                                                                      <  SRR4302532.2519504/94‑1 (MQ=60)

           agcattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTC                                                                                    >  SRR4302532.3454835/10‑94 (MQ=60)

           AGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTC                                                                                    >  SRR4302532.5085855/1‑94 (MQ=60)

           AGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTC                                                                                    >  SRR4302532.3537783/1‑94 (MQ=60)

            gcattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCG                                                                                   >  SRR4302532.5601752/9‑94 (MQ=60)

            GTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCG                                                                                   >  SRR4302532.5743344/1‑94 (MQ=60)

             cattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGC                                                                                  >  SRR4302532.3394422/8‑94 (MQ=60)

             cattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGC                                                                                  <  SRR4302532.4061556/87‑1 (MQ=60)

             cattaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGC                                                                                  >  SRR4302532.867747/8‑94 (MQ=60)

              ATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCA                                                                                 <  SRR4302532.6199960/94‑1 (MQ=60)

              ATTAATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCA                                                                                 >  SRR4302532.3380456/1‑94 (MQ=60)

               ttaatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCAT                                                                                <  SRR4302532.2473478/89‑1 (MQ=60)

               TCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCAT                                                                                >  SRR4302532.3472503/1‑94 (MQ=60)

                taatCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATC                                                                               >  SRR4302532.5886306/5‑94 (MQ=60)

                  ATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT                                                                             <  SRR4302532.2653072/94‑1 (MQ=60)

                  ATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT                                                                             >  SRR4302532.5157459/1‑94 (MQ=60)

                  ATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT                                                                             <  SRR4302532.3637223/94‑1 (MQ=60)

                  ATCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCT                                                                             >  SRR4302532.2771975/1‑94 (MQ=60)

                  ACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCT                                                                             <  SRR4302532.4411610/94‑1 (MQ=60)

                    CATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAA                                                                           >  SRR4302532.378162/1‑94 (MQ=60)

                    CATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAA                                                                           >  SRR4302532.5407832/1‑94 (MQ=60)

                    CATATCTACCCGAGCATCGACCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAA                                                                           >  SRR4302532.5531232/1‑94 (MQ=60)

                      TATCTCCCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAAT                                                                         <  SRR4302532.302465/94‑1 (MQ=60)

                      TATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAAT                                                                         <  SRR4302532.4427808/94‑1 (MQ=60)

                      TATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAAT                                                                         <  SRR4302532.4678093/94‑1 (MQ=60)

                      TATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAAT                                                                         <  SRR4302532.1867762/94‑1 (MQ=60)

                      TATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAAT                                                                         >  SRR4302532.2241026/1‑94 (MQ=60)

                      TATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAAT                                                                         >  SRR4302532.1993700/1‑94 (MQ=60)

                       ATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATG                                                                        <  SRR4302532.1332044/94‑1 (MQ=60)

                       ATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATG                                                                        >  SRR4302532.2014905/1‑94 (MQ=60)

                       ATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATG                                                                        >  SRR4302532.2666584/1‑94 (MQ=60)

                        TCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGG                                                                       <  SRR4302532.2581429/94‑1 (MQ=60)

                        TCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGG                                                                       >  SRR4302532.6020359/1‑94 (MQ=60)

                         CTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGG                                                                      >  SRR4302532.6233517/1‑94 (MQ=60)

                         CTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGG                                                                      >  SRR4302532.1898857/1‑94 (MQ=60)

                          TACCCGCGCATCGCCCGTGTGTGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACACCGGTCTGCCGCAATGGTCGCATCCTAAATGGGT                                                                     <  SRR4302532.4002042/94‑1 (MQ=60)

                          TACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGT                                                                     <  SRR4302532.5862232/94‑1 (MQ=60)

                          TACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGT                                                                     <  SRR4302532.1352462/94‑1 (MQ=60)

                          TACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGT                                                                     <  SRR4302532.1515219/94‑1 (MQ=60)

                          TACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGT                                                                     >  SRR4302532.5704184/1‑94 (MQ=60)

                          TACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGT                                                                     <  SRR4302532.1921928/94‑1 (MQ=60)

                           ACCCGCGCATCGCCCGTGTGCGTAGCGTGGACGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTG                                                                    >  SRR4302532.79592/1‑94 (MQ=60)

                           ACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCACTGGTCGCATCCTAAATGGGTG                                                                    >  SRR4302532.5474034/1‑94 (MQ=60)

                           ACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTG                                                                    >  SRR4302532.3663627/1‑94 (MQ=60)

                            CCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGC                                                                   >  SRR4302532.6301137/1‑94 (MQ=60)

                            CCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGC                                                                   >  SRR4302532.3609432/1‑94 (MQ=60)

                             CCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCG                                                                  <  SRR4302532.3064040/94‑1 (MQ=60)

                             CCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCG                                                                  >  SRR4302532.5558459/1‑94 (MQ=60)

                             CCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCG                                                                  <  SRR4302532.398635/94‑1 (MQ=60)

                              CGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGT                                                                 >  SRR4302532.3217917/1‑94 (MQ=60)

                                CGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTT                                                               >  SRR4302532.494534/1‑94 (MQ=60)

                                CGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTT                                                               >  SRR4302532.2420894/1‑94 (MQ=60)

                                CGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTT                                                               <  SRR4302532.2381474/94‑1 (MQ=60)

                                CGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTT                                                               >  SRR4302532.1863767/1‑94 (MQ=60)

                                  CATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGG                                                             >  SRR4302532.1729533/1‑94 (MQ=60)

                                   ATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGG                                                            >  SRR4302532.1041787/1‑94 (MQ=60)

                                   ATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGG                                                            <  SRR4302532.4964028/94‑1 (MQ=60)

                                   ATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGG                                                            >  SRR4302532.4819033/1‑94 (MQ=60)

                                   ATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGG                                                            >  SRR4302532.4532746/1‑94 (MQ=60)

                                   ATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGG                                                            >  SRR4302532.4325621/1‑94 (MQ=60)

                                   ATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGG                                                            >  SRR4302532.5166040/1‑94 (MQ=60)

                                   ATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGG                                                            >  SRR4302532.2066927/1‑94 (MQ=60)

                                   ATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGG                                                            <  SRR4302532.2182477/94‑1 (MQ=60)

                                    TCGCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGT                                                           <  SRR4302532.1616844/94‑1 (MQ=60)

                                     CGCCCGTGTGCGTAGGGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTACATGGGTGTGGTTGGGTA                                                          >  SRR4302532.317115/1‑94 (MQ=60)

                                      GCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTAT                                                         >  SRR4302532.3049818/1‑94 (MQ=60)

                                      GCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTAT                                                         >  SRR4302532.5996201/1‑94 (MQ=60)

                                      GCCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTAT                                                         <  SRR4302532.2756162/94‑1 (MQ=60)

                                      GCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGAT                                                         >  SRR4302532.1083215/1‑94 (MQ=60)

                                       CCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATC                                                        >  SRR4302532.3789169/1‑94 (MQ=60)

                                       CCCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATC                                                        >  SRR4302532.2892146/1‑94 (MQ=60)

                                        CCGTGTGCGTCGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGtatcc                                                       >  SRR4302532.3977110/1‑89 (MQ=60)

                                        CCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCA                                                       >  SRR4302532.4451881/1‑94 (MQ=60)

                                        CCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCA                                                       >  SRR4302532.3886644/1‑94 (MQ=60)

                                        CCGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCA                                                       >  SRR4302532.4124596/1‑94 (MQ=60)

                                         CGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCAC                                                      <  SRR4302532.6045163/94‑1 (MQ=60)

                                         CGTGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCAC                                                      >  SRR4302532.1227694/1‑94 (MQ=60)

                                         CGTGTGCGTAGCGTGGAAGAGATCCACAACGCGTTATGATTTACATCGGCCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCAC                                                      <  SRR4302532.5533497/94‑1 (MQ=60)

                                           TGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCA                                                    <  SRR4302532.3509751/94‑1 (MQ=60)

                                           TGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCA                                                    <  SRR4302532.1001263/94‑1 (MQ=60)

                                           TGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCA                                                    >  SRR4302532.3572520/1‑94 (MQ=60)

                                           GGTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCA                                                    <  SRR4302532.1401705/94‑1 (MQ=60)

                                            GTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAG                                                   >  SRR4302532.141281/1‑94 (MQ=60)

                                            GTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAG                                                   <  SRR4302532.1789581/94‑1 (MQ=60)

                                            GTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAG                                                   >  SRR4302532.4296278/1‑94 (MQ=60)

                                            GTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAG                                                   <  SRR4302532.5333679/94‑1 (MQ=60)

                                            GTGCGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAG                                                   <  SRR4302532.289787/94‑1 (MQ=60)

                                               CGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCT                                                >  SRR4302532.3864815/1‑94 (MQ=60)

                                               CGTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCT                                                >  SRR4302532.213078/1‑94 (MQ=60)

                                               CGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCT                                                <  SRR4302532.2594947/94‑1 (MQ=60)

                                                GTAGCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTT                                               >  SRR4302532.5824491/1‑94 (MQ=60)

                                                  AGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTTA                                             >  SRR4302532.235448/1‑94 (MQ=60)

                                                  AGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGA                                             <  SRR4302532.5269812/94‑1 (MQ=60)

                                                  AGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGA                                             >  SRR4302532.3951620/1‑94 (MQ=60)

                                                   GCGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAA                                            <  SRR4302532.4034635/94‑1 (MQ=60)

                                                    CGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAG                                           >  SRR4302532.5976458/1‑94 (MQ=60)

                                                    CGTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAG                                           <  SRR4302532.3007294/94‑1 (MQ=60)

                                                     GTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGA                                          >  SRR4302532.5767676/1‑94 (MQ=60)

                                                     GTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGA                                          >  SRR4302532.5013891/1‑94 (MQ=60)

                                                     GTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGA                                          >  SRR4302532.1590981/1‑94 (MQ=60)

                                                     GTGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGA                                          >  SRR4302532.3254766/1‑94 (MQ=60)

                                                     GTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGA                                          >  SRR4302532.2672945/1‑94 (MQ=60)

                                                      TGGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAG                                         <  SRR4302532.3275093/94‑1 (MQ=60)

                                                      TGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAG                                         >  SRR4302532.293304/1‑94 (MQ=60)

                                                      TGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAG                                         <  SRR4302532.5000955/94‑1 (MQ=60)

                                                       GGAAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGT                                        <  SRR4302532.2621625/94‑1 (MQ=60)

                                                        GAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTA                                       >  SRR4302532.1155300/1‑94 (MQ=60)

                                                        GAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTA                                       >  SRR4302532.4164028/1‑94 (MQ=60)

                                                         GAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT                                      <  SRR4302532.3554606/94‑1 (MQ=60)

                                                         AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT                                      >  SRR4302532.2813744/1‑94 (MQ=60)

                                                         AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT                                      <  SRR4302532.714054/94‑1 (MQ=60)

                                                         AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT                                      <  SRR4302532.3362210/94‑1 (MQ=60)

                                                         AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT                                      <  SRR4302532.1486278/94‑1 (MQ=60)

                                                         AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT                                      >  SRR4302532.1641714/1‑94 (MQ=60)

                                                         AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT                                      <  SRR4302532.2215384/94‑1 (MQ=60)

                                                         AAGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTAT                                      <  SRR4302532.2337145/94‑1 (MQ=60)

                                                         AAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTAT                                      <  SRR4302532.3761286/94‑1 (MQ=60)

                                                          AGAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATG                                     >  SRR4302532.670632/1‑94 (MQ=60)

                                                          AGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATG                                     <  SRR4302532.974897/94‑1 (MQ=60)

                                                          AGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATG                                     <  SRR4302532.3619424/94‑1 (MQ=60)

                                                           GAGATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGC                                    <  SRR4302532.5921101/94‑1 (MQ=60)

                                                             GATCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCC                                  >  SRR4302532.6265616/1‑94 (MQ=60)

                                                               TCCTTCACGCGTTATGATTTACATCGGTCTGCCGCAATGGGCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGC                                >  SRR4302532.1205442/1‑94 (MQ=60)

                                                               TCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGC                                >  SRR4302532.5184480/1‑94 (MQ=60)

                                                                ccttcACGCGTTATTATTTACATTGGTCTGCCACATTGGTCGCATCCTAATTGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCC                               <  SRR4302532.5953863/89‑1 (MQ=60)

                                                                ccttcACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCC                               >  SRR4302532.5033818/6‑94 (MQ=60)

                                                                 cttcACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCA                              >  SRR4302532.5073097/5‑94 (MQ=60)

                                                                 CTCCACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCA                              <  SRR4302532.2721169/94‑1 (MQ=60)

                                                                 CTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCA                              >  SRR4302532.4402493/1‑94 (MQ=60)

                                                                 ATCAACGCGTTATGATTTACATCGGTCTACCGCAGTGGTCGCATCCTAAATGGGAGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCA                              >  SRR4302532.4199050/1‑94 (MQ=60)

                                                                  ttcACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCAC                             >  SRR4302532.4365748/4‑94 (MQ=60)

                                                                  ttcACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCAC                             >  SRR4302532.4660763/4‑94 (MQ=60)

                                                                  ttcACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGGTGGGTATCACCAGCCTTGAAGAGTATCCCCGCCAC                             >  SRR4302532.5131890/4‑94 (MQ=60)

                                                                    CACGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTT                           >  SRR4302532.4517284/1‑94 (MQ=60)

                                                                      CGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTA                         >  SRR4302532.2988454/1‑94 (MQ=60)

                                                                      CGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTA                         >  SRR4302532.2282417/1‑94 (MQ=60)

                                                                      CGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTA                         >  SRR4302532.5427746/1‑94 (MQ=60)

                                                                      CGCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGATGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTATA                         >  SRR4302532.3323624/1‑94 (MQ=60)

                                                                       GCGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTACCCCCAGCCTTGAAGAGTATGCCCGCCACTTTAA                        <  SRR4302532.3810764/94‑1 (MQ=60)

                                                                        gtTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAAGGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAAC                       <  SRR4302532.4253981/92‑1 (MQ=60)

                                                                        CGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAAC                       >  SRR4302532.6083380/1‑94 (MQ=60)

                                                                        CGTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAAC                       >  SRR4302532.1009777/1‑94 (MQ=60)

                                                                        CGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAAC                       >  SRR4302532.1543523/1‑94 (MQ=60)

                                                                         TTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCCCCAGCCTTGAAGAGTATGCCCGCCACTTTAACT                      <  SRR4302532.4825806/94‑1 (MQ=60)

                                                                         GTTTTGATTTACATGGGTCTGCCGCAAGGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACT                      <  SRR4302532.1528880/94‑1 (MQ=60)

                                                                         GTTGTGTTTTACATCGGGCTGCCGCAATGGTCGCATCCTAAATGGGGGCGGTGGGGTATCCCCACCCTTGAAGAGTATGCCCGCCACTTTAACT                      <  SRR4302532.2155262/94‑1 (MQ=60)

                                                                         GTTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACT                      >  SRR4302532.2455008/1‑94 (MQ=60)

                                                                         GTTATGATTTACATCGGTCTGCCGCAAGGGTCGCATCCTAAAGGGGTGCGGTTGGGTATCACCAGCCTGGAAGAGTATGCCCGCCACTTTAACT                      <  SRR4302532.5500311/94‑1 (MQ=60)

                                                                         GTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGCTCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACT                      >  SRR4302532.3542496/1‑94 (MQ=60)

                                                                         GTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACT                      >  SRR4302532.3932246/1‑94 (MQ=60)

                                                                          TTATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTG                     >  SRR4302532.2850275/1‑94 (MQ=60)

                                                                           TATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGC                    >  SRR4302532.942348/1‑94 (MQ=60)

                                                                           TATGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGC                    >  SRR4302532.3715188/1‑94 (MQ=60)

                                                                             TGATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGT                  >  SRR4302532.1298040/1‑94 (MQ=60)

                                                                              GTTTTACATCGGTCTGCCGCAATGGTCGCATCCTAAAGGGGTGGGGTTGGGTACCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTG                 <  SRR4302532.4229971/94‑1 (MQ=60)

                                                                              GTTTTACATCGGTCTACCGCAATGGTCGCATCCTAAAGGGGTGCGGTGGGGGATCACCAGCTTTGAAGAGTATGCCCGCCACTTTAACTGCGTG                 <  SRR4302532.3072379/94‑1 (MQ=60)

                                                                               ATTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGA                >  SRR4302532.752890/1‑94 (MQ=60)

                                                                                TTTACATCGGTCTGCCGCAATGGTCGCATCCTAAGTGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGac               <  SRR4302532.4758835/94‑3 (MQ=60)

                                                                                TTTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGac               >  SRR4302532.3905896/1‑92 (MQ=60)

                                                                                TTTACATCGGTCTGCCGCAATGGCCGCATCCTAAATGGGTGCGTTGGGGTATCCCCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGac               <  SRR4302532.5794214/94‑3 (MQ=60)

                                                                                 TTACATGGGTCTGCCGCAATGTCCGCATCATAAAGGGGTGGGGTTGGGTATCCCCAGCCTTGAAGATTATGCCCGCCACTTTAACTGCGTGacg              <  SRR4302532.5633373/94‑4 (MQ=37)

                                                                                 TTACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGacg              >  SRR4302532.1749437/1‑91 (MQ=60)

                                                                                 TTACACCGGTCTGCCGCAATGGTCGCATCCTAAAGGGGTGCGGTTGGGTATCCCCAGCCTTGAAGAGTATCCCCGCCACTTTAACTGCGTGacg              <  SRR4302532.4946575/94‑4 (MQ=60)

                                                                                   ACATGGGTCTCCCGCAATGCTCGACTCCTAAAGGGGGGCGGTTGGGTATCCCCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGG            <  SRR4302532.1105973/94‑1 (MQ=53)

                                                                                   ACATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGacgcg            <  SRR4302532.3142435/94‑6 (MQ=60)

                                                                                    CATGGGTCTACCGCAATGGTCGCATCCTAAAGGGGTGGGGTTGGGGATCCCCAGCTTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGC           <  SRR4302532.6352830/94‑1 (MQ=60)

                                                                                    CATCGGTCTGCCGCAATGGTCGCATCTTAAGTGGGTGGGGTTGGTTATCACCAGCCTTGAAGATTATGCCCGCCACTTTAACTGCGTGacgcgg           <  SRR4302532.2100289/94‑7 (MQ=60)

                                                                                    CATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGacgcgg           >  SRR4302532.6183975/1‑88 (MQ=60)

                                                                                    CATCGGTCTGCCGCAATGGTCGCATCCTAAAGGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGacgcgg           <  SRR4302532.3156477/94‑7 (MQ=60)

                                                                                     ATCGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGacgcggg          >  SRR4302532.4259302/1‑87 (MQ=60)

                                                                                       CGGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGacgcgggca        >  SRR4302532.4331380/1‑85 (MQ=60)

                                                                                        GGTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGacgcgggcat       <  SRR4302532.5223307/94‑11 (MQ=60)

                                                                                         GTCTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGacgcgggcatt      >  SRR4302532.1953354/1‑83 (MQ=60)

                                                                                         GTCTCCCGCAATGTTCGCATCCAAAATGGGTGGGGTTGGGGACCCCCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACAC      <  SRR4302532.6252264/94‑1 (MQ=60)

                                                                                           CTGCCGCAATGGTCGCATCCTAAGTGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGacgcgggcatttt    <  SRR4302532.865540/94‑14 (MQ=60)

                                                                                           CTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGacgcgggcatttt    >  SRR4302532.2444145/1‑81 (MQ=60)

                                                                                           CTGCCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGTATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGacgcgggcatttt    >  SRR4302532.2609457/1‑81 (MQ=60)

                                                                                           CTGCCGCAATGGTCGCATCATAAGTGGGTGCGTTTGGGTATCCCCAGCCTTGAAGATTATGCCCGCCACTTTAACTGCGTGacgcgggcatttt    <  SRR4302532.5573656/94‑14 (MQ=58)

                                                                                           CTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCA    >  SRR4302532.775708/1‑94 (MQ=60)

                                                                                             GCCGCAATGGTCGCACCCTAAGGGGGTGCGGTGGGTTACCCCCAGCCTTGAAGATTATGCCCGCCACTTTAACTGCGTGacgcgggcattttaa  <  SRR4302532.668087/94‑16 (MQ=24)

                                                                                             ACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACG  >  SRR4302532.824518/1‑94 (MQ=60)

AGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACG  >  NC_000913/1949343‑1949529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 6 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`