Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,727,394 |
T→C |
noncoding (71/76 nt) |
gltW ← |
tRNA‑Sec |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,727,394 | 0 | T | C | 93.1%
| 389.4
/ 18.8
| 145 | noncoding (71/76 nt) | gltW | tRNA‑Sec |
| Reads supporting (aligned to +/- strand): ref base T (8/2); new base C (84/51); total (92/53) |
| Fisher's exact test for biased strand distribution p-value = 3.27e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.01e-01 |
Only 100 of 153 total aligned reads displayed.
TTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCC > NC_000913/2727304‑2727448
|
tttAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGcccc < 2:3997601/93‑1 (MQ=255)
ttAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCcccc < 1:6129856/93‑1 (MQ=255)
ttAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCcccc > 2:1158282/1‑93 (MQ=255)
ttAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCcccc > 1:2145713/1‑93 (MQ=255)
taaaaGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCcccc < 2:3603158/91‑1 (MQ=255)
tAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCt > 1:3372654/1‑93 (MQ=255)
tAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGAAAGTGGCGCCCCCt > 1:989273/1‑93 (MQ=255)
aaaGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTa < 1:703397/93‑1 (MQ=255)
aaaGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTa < 2:3286658/93‑1 (MQ=255)
agagCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTTACAAACCAGCAAGTGGCGTCCCCTAgg < 1:3522840/93‑1 (MQ=255)
agagCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAgg < 1:3564544/93‑1 (MQ=255)
agagCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAgg < 2:4051759/93‑1 (MQ=255)
agagCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGCCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAgg < 1:3575192/93‑1 (MQ=255)
gagCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAggg > 1:2038618/1‑93 (MQ=255)
gagCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAggg > 2:3217404/1‑93 (MQ=255)
gagCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAggg > 1:2924099/1‑93 (MQ=255)
gagCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAggg < 1:5094704/93‑1 (MQ=255)
agCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAgggg < 2:3724506/93‑1 (MQ=255)
gCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGa < 1:4310163/93‑1 (MQ=255)
gCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGa < 2:2928067/93‑1 (MQ=255)
gCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGa > 2:5930951/1‑93 (MQ=255)
gCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGa > 1:1880866/1‑93 (MQ=255)
cAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGAt < 2:2208796/93‑1 (MQ=255)
aaaTATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGAtt > 1:2685565/1‑93 (MQ=255)
aaaTATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGAtt < 2:1035188/93‑1 (MQ=255)
aaTATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTc > 1:6139982/1‑93 (MQ=255)
aaTATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTc > 2:5475481/1‑93 (MQ=255)
aaTATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCACCCTAGGGGATTc > 1:5606799/1‑93 (MQ=255)
atatatCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCg > 2:5460622/1‑93 (MQ=255)
tatatCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGa > 1:3451208/1‑93 (MQ=255)
tatatCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGa > 1:1122324/1‑93 (MQ=255)
tatatCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGa > 2:2482057/1‑93 (MQ=255)
atatCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGaa < 1:3220810/93‑1 (MQ=255)
atatCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGaa > 1:5881051/1‑93 (MQ=255)
tatCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAAc > 2:2697376/1‑93 (MQ=255)
tatCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAAc < 2:1812869/93‑1 (MQ=255)
tatCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAAc < 2:2150414/93‑1 (MQ=255)
tatCAAACAAGACTTAACAGTCTGATTTGAGATATTGAGGATGGCGACTTTCACTCACAAATCAGAAAGTGGCGCCCCCTAGGGGCTTCGAAc > 1:3797722/1‑93 (MQ=18)
atCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAAcc > 2:5050119/1‑93 (MQ=255)
cAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAAcccc > 2:4175207/1‑93 (MQ=255)
cAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAAcccc < 2:4073827/93‑1 (MQ=255)
cAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAAcccc > 2:5751928/1‑93 (MQ=255)
aCAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGt > 2:3996076/1‑93 (MQ=255)
aCAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGt > 2:1293543/1‑93 (MQ=255)
cAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGtt > 2:5620206/1‑93 (MQ=255)
cAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGtt > 2:3276891/1‑93 (MQ=255)
cAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGtt > 2:950034/1‑93 (MQ=255)
aaGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCAAACCCCTGttc > 1:4466447/1‑92 (MQ=255)
aaGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTa > 1:1066264/1‑93 (MQ=255)
aaGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTa > 2:4809497/1‑93 (MQ=255)
aaGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTa > 1:2399856/1‑93 (MQ=255)
aaGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTa > 1:461251/1‑93 (MQ=255)
aGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTAc > 1:179855/1‑93 (MQ=255)
cTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTAccgc > 1:4725143/1‑93 (MQ=255)
ttAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTAccgcc > 2:1913836/1‑93 (MQ=255)
aaCAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGt > 2:5603773/1‑93 (MQ=255)
aCAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTg > 2:928936/1‑93 (MQ=255)
aCAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACACCTGTTACCGCCGTg > 2:882239/1‑93 (MQ=255)
cAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGa > 1:1068798/1‑93 (MQ=255)
cAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGa < 2:450730/93‑1 (MQ=255)
aGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGaa > 1:5336904/1‑93 (MQ=255)
aGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGaa < 1:1548463/93‑1 (MQ=255)
gTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGaaa < 1:5097312/93‑1 (MQ=255)
gTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGaaa < 2:2390825/93‑1 (MQ=255)
gTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGaaa > 2:767969/1‑93 (MQ=255)
gTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGaaa > 1:3099829/1‑93 (MQ=255)
gTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGaaa < 2:1334218/93‑1 (MQ=255)
tCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAg < 2:1518559/93‑1 (MQ=37)
tCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAg > 1:4505584/1‑93 (MQ=37)
cTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAgg < 1:2571018/93‑1 (MQ=25)
cTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAgg < 1:3347429/93‑1 (MQ=25)
tGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGATCCCCTGTTACCGCCGTGAAAggg < 1:5694238/93‑1 (MQ=255)
tGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAggg > 1:3676643/1‑93 (MQ=25)
tGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAggg > 2:1993605/1‑93 (MQ=25)
gTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGc < 2:2197427/93‑1 (MQ=18)
gTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGc > 1:5167324/1‑93 (MQ=21)
ttttGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCg > 2:4519120/1‑93 (MQ=21)
tttGAGATATTGATGTCTGCGATTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGTTTCGAACTCCTGGTTCTGCTGTGAAAGGGCgg > 1:5467057/1‑93 (MQ=11)
tttGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCgg < 2:3383231/93‑1 (MQ=18)
tttGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCgg > 2:3244135/1‑93 (MQ=21)
ttGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGgt > 1:1461851/1‑93 (MQ=21)
tGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGgtg < 2:3006908/93‑1 (MQ=33)
tGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGAGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGgtg > 2:2275361/1‑93 (MQ=255)
gagaTATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGgtgt < 2:2299444/93‑1 (MQ=18)
agaTATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTc > 1:3246418/1‑93 (MQ=21)
gaTATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTcc > 2:1453931/1‑93 (MQ=18)
gaTAGTGAGGTCGGCGACTTTCACTCACAACCCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTcc < 1:2531560/93‑1 (MQ=16)
atatTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCt < 2:4429626/93‑1 (MQ=18)
tatTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTg > 2:3499684/1‑93 (MQ=18)
tatTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTg > 1:675868/1‑93 (MQ=18)
tatTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTg < 1:5860556/93‑1 (MQ=18)
tatTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTATCCTg > 2:4943705/1‑93 (MQ=16)
ttGAGGTCGGCGACTTTCCCTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTCCCGCCGTGACAGGGCGGTGTCCTggg > 1:1869908/1‑93 (MQ=11)
ttGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTggg > 2:5660157/1‑93 (MQ=18)
ttGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTggg > 2:670802/1‑93 (MQ=18)
ttGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTggg > 2:730943/1‑93 (MQ=18)
ttGAGGTCGACGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTggg > 1:1181267/1‑93 (MQ=16)
tGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGc < 1:5742560/93‑1 (MQ=17)
gAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGcc > 1:1779879/1‑93 (MQ=14)
gAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGcc < 1:3016131/93‑1 (MQ=14)
|
TTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCC > NC_000913/2727304‑2727448
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTT > NC_000913/2727302‑2727487
|
ATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCC > SRR4302532.1724964/1‑94 (MQ=60)
TTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCC > SRR4302532.3739554/1‑94 (MQ=60)
TTTGTAAAGAGCAAATATAGCAACCAAGCCTGAACAGTCTGTTTTGAGATATTCTGGTCGGCGACTTTCATTCCCAAACCAGCAAGTGGCGCCC < SRR4302532.6119183/94‑1 (MQ=48)
TTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCC > SRR4302532.2217396/1‑94 (MQ=60)
TTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCT < SRR4302532.6341367/94‑1 (MQ=60)
TTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCT > SRR4302532.3485432/1‑94 (MQ=60)
TTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGAAAGTGGCGCCCCCT > SRR4302532.1023059/1‑94 (MQ=60)
TAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTA > SRR4302532.2046819/1‑94 (MQ=60)
AAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAG < SRR4302532.727443/94‑1 (MQ=60)
AAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAG < SRR4302532.1131660/94‑1 (MQ=60)
AGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTTACAAACCAGCAAGTGGCGTCCCCTAGGG < SRR4302532.3640756/94‑1 (MQ=60)
AGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGG < SRR4302532.3683806/94‑1 (MQ=60)
AGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGG > SRR4302532.2106527/1‑94 (MQ=60)
AGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGG > SRR4302532.3021428/1‑94 (MQ=60)
AGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGCCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGG < SRR4302532.3694818/94‑1 (MQ=60)
GAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGG < SRR4302532.5269893/94‑1 (MQ=60)
AGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGA > SRR4302532.1783751/1‑94 (MQ=60)
AGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGA > SRR4302532.1943214/1‑94 (MQ=60)
AGCAAATATATCAAACAAGACTTAACAGTCTGTGTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGA > SRR4302532.5333448/1‑94 (MQ=60)
GCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGAT > SRR4302532.3251084/1‑94 (MQ=60)
GCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGAT < SRR4302532.4455875/94‑1 (MQ=60)
CAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATT > SRR4302532.843699/1‑94 (MQ=60)
CAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATT > SRR4302532.2775757/1‑94 (MQ=60)
AAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTC > SRR4302532.6351780/1‑94 (MQ=60)
AAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCACCCTAGGGGATTC > SRR4302532.5801413/1‑94 (MQ=60)
ATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGA > SRR4302532.1159796/1‑94 (MQ=60)
ATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGA > SRR4302532.3566800/1‑94 (MQ=60)
TATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAA > SRR4302532.6084759/1‑94 (MQ=60)
ATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAAC < SRR4302532.3327735/94‑1 (MQ=60)
ATATCAAACAAGACTTAACAGTCTGATTTGAGATATTGAGGATGGCGACTTTCACTCACAAATCAGAAAGTGGCGCCCCCTAGGGGCTTCGAAC > SRR4302532.3925876/1‑94 (MQ=50)
ATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACAC > SRR4302532.1331117/1‑94 (MQ=60)
ACAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCC < SRR4302532.2922833/94‑1 (MQ=60)
CAAACAAGACTTAACAGTCTGTTTTGAGATCTTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCT < SRR4302532.262774/94‑1 (MQ=60)
AAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTG > SRR4302532.695461/1‑94 (MQ=60)
CAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTA > SRR4302532.4618717/1‑94 (MQ=55)
CAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCAAACCCCTGTTC > SRR4302532.4618716/1‑94 (MQ=52)
CAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTA > SRR4302532.1102123/1‑94 (MQ=53)
CAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTA > SRR4302532.2479754/1‑94 (MQ=53)
CAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTA > SRR4302532.477302/1‑94 (MQ=53)
AAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTAC > SRR4302532.185906/1‑94 (MQ=50)
GACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTTACGCACAAACCAGCAAGTGTCGCCCCTTAGGGGAGTCGATCCCCTGTTACCG > SRR4302532.5647861/1‑94 (MQ=60)
ACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGC > SRR4302532.4886380/1‑94 (MQ=43)
TTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCG > SRR4302532.3414194/1‑94 (MQ=38)
TTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCG > SRR4302532.491060/1‑94 (MQ=38)
AACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTG > SRR4302532.4302127/1‑94 (MQ=33)
ACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGA > SRR4302532.1104724/1‑94 (MQ=31)
CAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAA > SRR4302532.5522000/1‑94 (MQ=28)
AGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAA > SRR4302532.3202625/1‑94 (MQ=25)
AGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAA > SRR4302532.4879709/1‑94 (MQ=25)
AGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAA < SRR4302532.1600790/94‑1 (MQ=25)
GTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAG > SRR4302532.2393307/1‑94 (MQ=23)
GTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAG > SRR4302532.5845775/1‑94 (MQ=23)
GTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAG > SRR4302532.4659417/1‑94 (MQ=23)
GTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAG < SRR4302532.5272577/94‑1 (MQ=23)
CTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGG < SRR4302532.3459182/94‑1 (MQ=15)
CTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGG < SRR4302532.2656871/94‑1 (MQ=15)
CTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGG > SRR4302532.3800165/1‑94 (MQ=15)
TGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGATCCCCTGTTACCGCCGTGAAAGGGC < SRR4302532.5892897/94‑1 (MQ=11)
TGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGC > SRR4302532.5345268/1‑94 (MQ=12)
GTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCG > SRR4302532.5965574/1‑94 (MQ=10)
TTTTGAGATATTGATGTCTGCGATTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGTTTCGAACTCCTGGTTCTGCTGTGAAAGGGCGG > SRR4302532.5656603/1‑94 (MQ=5)
TTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGG < SRR4302532.3530560/94‑1 (MQ=10)
TTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGT > SRR4302532.1511112/1‑94 (MQ=10)
GAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTC > SRR4302532.3354191/1‑94 (MQ=10)
GATAGTGAGGTCGGCGACTTTCACTCACAACCCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCT < SRR4302532.2616024/94‑1 (MQ=2)
atataaaggccgccgactttcctccaaaacCCAGCAAGTGGCGTCCCTTGGGGGA‑TCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGG < SRR4302532.737229/64‑1 (MQ=0)
ATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTG > SRR4302532.3657823/1‑94 (MQ=10)
ATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTG > SRR4302532.699125/1‑94 (MQ=10)
ATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCCTGAAAGGGCGGgggcccg > SRR4302532.5019632/1‑87 (MQ=9)
TATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGG < SRR4302532.6063766/94‑1 (MQ=10)
ATTGAGGTCGGCGACTTTCCCTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTCCCGCCGTGACAGGGCGGTGTCCTGGG > SRR4302532.1931837/1‑94 (MQ=6)
ATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGG > SRR4302532.1931835/1‑94 (MQ=7)
ATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGG > SRR4302532.6135695/1‑94 (MQ=7)
ATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGG > SRR4302532.3028646/1‑94 (MQ=7)
ATTGAGGTCGACGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGG > SRR4302532.1220727/1‑94 (MQ=4)
TGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCC < SRR4302532.5942481/94‑1 (MQ=2)
TGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCC > SRR4302532.1839429/1‑94 (MQ=2)
GAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCT < SRR4302532.3115661/94‑1 (MQ=0)
AGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTC > SRR4302532.327595/1‑94 (MQ=0)
TCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAG > SRR4302532.4301649/1‑94 (MQ=0)
TCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAG < SRR4302532.6264919/94‑1 (MQ=0)
TCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAG < SRR4302532.4513378/94‑1 (MQ=0)
TCGGCGACTTTCACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAG < SRR4302532.3435327/94‑1 (MQ=0)
CGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGC > SRR4302532.4959029/1‑94 (MQ=0)
CGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGA < SRR4302532.4586880/94‑1 (MQ=0)
GGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGAC > SRR4302532.3049534/1‑94 (MQ=0)
GGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGAC > SRR4302532.3403572/1‑94 (MQ=0)
GACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGCACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAA > SRR4302532.1090564/1‑94 (MQ=0)
GACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAA > SRR4302532.4082911/1‑94 (MQ=0)
ACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAG < SRR4302532.3704285/94‑1 (MQ=0)
ACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAG < SRR4302532.6320333/94‑1 (MQ=0)
ACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAG > SRR4302532.5113624/1‑94 (MQ=0)
CTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGG > SRR4302532.4286422/1‑94 (MQ=0)
TTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGG < SRR4302532.1690283/94‑1 (MQ=0)
TTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGG < SRR4302532.2250189/94‑1 (MQ=0)
TTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGG < SRR4302532.2324114/94‑1 (MQ=0)
TTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAACGGCGGTGTCCTGGGCCTCTAGACGAAGGGG < SRR4302532.4016956/94‑1 (MQ=0)
CACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGAC > SRR4302532.2885530/1‑94 (MQ=0)
CACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGAC < SRR4302532.5802514/94‑1 (MQ=0)
ACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACA > SRR4302532.3809561/1‑94 (MQ=0)
ACTCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACA < SRR4302532.735777/94‑1 (MQ=0)
CTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACAC < SRR4302532.5502234/94‑1 (MQ=0)
CTCACAAACCAGAAAGTGGCGCTCCCTGGGGGATTCGACCCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACAC < SRR4302532.3007462/94‑1 (MQ=0)
TCACAAACCAGCAAGTGGCGTCCTCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACG < SRR4302532.3617943/94‑1 (MQ=0)
TCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACG > SRR4302532.725158/1‑94 (MQ=0)
TCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACG < SRR4302532.2007037/94‑1 (MQ=0)
TCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACG > SRR4302532.5266841/1‑94 (MQ=0)
TCACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACG > SRR4302532.2484575/1‑94 (MQ=0)
CACAAACCAGCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGA > SRR4302532.6036349/1‑94 (MQ=0)
ACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAA < SRR4302532.1883023/94‑1 (MQ=0)
ACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAA > SRR4302532.6008401/1‑94 (MQ=0)
ATCCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTTAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAAT < SRR4302532.5509794/94‑1 (MQ=0)
CAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGC > SRR4302532.2195332/1‑94 (MQ=0)
AGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCT > SRR4302532.6076361/1‑94 (MQ=0)
GCAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTT > SRR4302532.2219145/1‑94 (MQ=0)
CAAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTA < SRR4302532.4204557/94‑1 (MQ=0)
ATGTGGCGTCCCCGAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTAT < SRR4302532.2805077/94‑1 (MQ=0)
AAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCCGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTAT > SRR4302532.4868807/1‑94 (MQ=0)
AAGTGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTAT < SRR4302532.1854619/94‑1 (MQ=0)
AGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATC < SRR4302532.516534/94‑1 (MQ=0)
GTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCA < SRR4302532.5967935/94‑1 (MQ=0)
GTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCA < SRR4302532.2439611/94‑1 (MQ=0)
TGGCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCAC > SRR4302532.1639215/1‑94 (MQ=0)
GGCGTCCCCTGGGGTATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACG < SRR4302532.5602754/94‑1 (MQ=0)
GCGCCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGC < SRR4302532.5102002/94‑1 (MQ=0)
CGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCG < SRR4302532.1471827/94‑1 (MQ=0)
GTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGT > SRR4302532.1547234/1‑94 (MQ=0)
TCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTT > SRR4302532.1406344/1‑94 (MQ=0)
TCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTT < SRR4302532.4481077/94‑1 (MQ=0)
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ATTTTTAAAGAGCAAATATATCAAACAAGACTTAACAGTCTGTTTTGAGATATTGAGGTCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTT > NC_000913/2727302‑2727487
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
