Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,005,399 |
+C |
coding (1044/1092 nt) |
ygeW → |
putative carbamoyl transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,005,398 | 1 | . | C | 99.6%
| 871.8
/ ‑3.8
| 238 | coding (1043/1092 nt) | ygeW | putative carbamoyl transferase |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base C (132/105); total (132/106) |
| Fisher's exact test for biased strand distribution p-value = 4.45e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 |
Only 100 of 262 total aligned reads displayed.
AGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGAT‑CTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCG > NC_000913/3005306‑3005485
|
agaagGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCga‑tgat < 1:4920462/93‑1 (MQ=255)
agGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGAT‑cct > 2:2569307/1‑91 (MQ=255)
agGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGAT‑cct < 2:897061/93‑3 (MQ=255)
agGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGAT‑cct < 1:1982373/93‑3 (MQ=255)
ggTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGAT‑cctg > 2:1924231/1‑90 (MQ=255)
ggTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGAT‑cctg > 1:3713107/1‑90 (MQ=255)
ggTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGAT‑cctg > 2:3386413/1‑90 (MQ=255)
aaGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTccc > 1:4528538/1‑93 (MQ=255)
aaGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTccc > 1:3393220/1‑93 (MQ=255)
gTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGt > 1:625512/1‑93 (MQ=255)
tGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTa > 1:5186188/1‑93 (MQ=255)
gACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCTCGTaa < 1:5897028/93‑1 (MQ=255)
aCTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTaaa > 1:6109825/1‑93 (MQ=255)
aCTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTaaa < 1:1184252/93‑1 (MQ=255)
cTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAAt > 1:785950/1‑93 (MQ=255)
tGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATa < 1:2387271/93‑1 (MQ=255)
tGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATa < 2:5605076/93‑1 (MQ=255)
tGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATa > 2:5428968/1‑93 (MQ=255)
gAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGTTCCTGTCCCGTAAATAc > 2:5489632/1‑93 (MQ=255)
gAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATAc < 2:1498510/93‑1 (MQ=255)
gAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATAc > 2:1644946/1‑93 (MQ=255)
gaGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACg < 2:3055250/92‑1 (MQ=255)
ggCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGcc < 2:427572/93‑1 (MQ=255)
ggCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGcc < 2:1482562/93‑1 (MQ=255)
ggCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGcc < 1:1005851/93‑1 (MQ=255)
ggCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGcc < 2:5072940/93‑1 (MQ=255)
gCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCa < 1:3747629/93‑1 (MQ=255)
cGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCaa > 1:1787530/1‑93 (MQ=255)
gTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCaaa > 2:3012367/1‑93 (MQ=255)
gTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCaaa < 2:2453872/93‑1 (MQ=255)
tATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAAc < 2:2216002/93‑1 (MQ=255)
aTTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAAcc > 2:5230409/1‑93 (MQ=255)
aTTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAAcc < 2:349510/93‑1 (MQ=255)
aTTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAAcc > 1:2267335/1‑93 (MQ=255)
ttCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCa > 2:5102881/1‑93 (MQ=255)
tCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAg < 2:1948350/93‑1 (MQ=255)
gAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGt > 2:330485/1‑93 (MQ=255)
aaaaTACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGc < 2:1564934/93‑1 (MQ=255)
aaaaTACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGc > 1:5692056/1‑93 (MQ=255)
aaTACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCAc < 2:2180226/93‑1 (MQ=255)
gTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCg > 1:687987/1‑93 (MQ=255)
gTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTACCGTAAATACGCCAAACCAGGTGCACTGCTCg > 1:3238267/1‑93 (MQ=255)
aTCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAg < 1:3320721/93‑1 (MQ=255)
tCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGc < 1:4630489/93‑1 (MQ=255)
cGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCa < 2:5951991/93‑1 (MQ=255)
gCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCaa > 2:133752/1‑93 (MQ=255)
ctacctacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAAc < 2:869771/93‑1 (MQ=255)
acctacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAActg > 2:5372203/1‑93 (MQ=255)
tacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAActgctg > 1:5388118/1‑93 (MQ=255)
tacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAActgctg > 2:292008/1‑93 (MQ=255)
tacAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAActgctg < 1:4672782/93‑1 (MQ=255)
acAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGa > 1:1288829/1‑93 (MQ=255)
acAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGa < 1:4178228/93‑1 (MQ=255)
cAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGaa > 2:3889547/1‑93 (MQ=255)
cAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGaa > 2:4673115/1‑93 (MQ=255)
aaaGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGaaa < 2:4076597/93‑1 (MQ=255)
aaaGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGaaa > 1:290800/1‑93 (MQ=255)
ataagCCAGCCGGAAGCCTTATATCATCGCCGCGATTGTC‑CTGTCCCGTAAATACGCCAAACCAGGTCCACTGCTCGAGCAACTGCTGAaaga < 2:447198/91‑1 (MQ=255)
agaagCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAaaga < 1:360422/93‑1 (MQ=255)
agaagCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAaaga > 2:2589547/1‑93 (MQ=255)
aagCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAaagaag < 1:2211098/93‑1 (MQ=255)
agCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAgc < 2:5757858/93‑1 (MQ=255)
agCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAgc > 2:4905635/1‑93 (MQ=255)
gCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAgcg > 1:744381/1‑93 (MQ=255)
gCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAgcg > 2:2787463/1‑93 (MQ=255)
aGCTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCaa < 1:1134433/93‑1 (MQ=255)
cTGGAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGa < 2:1089005/93‑1 (MQ=255)
tGGGAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGaa > 2:688187/1‑93 (MQ=255)
ggAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAc > 1:3108623/1‑93 (MQ=255)
ggAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAc < 1:3974446/93‑1 (MQ=255)
ggAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAc < 1:2502574/93‑1 (MQ=255)
ggAAGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAc > 1:1689443/1‑93 (MQ=255)
aaGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAcgc < 2:4777593/93‑1 (MQ=255)
aaGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAcgc < 2:6075457/93‑1 (MQ=255)
aGCCTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAcgcg < 2:3126746/93‑1 (MQ=255)
ccTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTg > 2:128448/1‑93 (MQ=255)
cTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGa > 2:4801689/1‑93 (MQ=255)
cTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGa > 1:4264694/1‑93 (MQ=255)
cTTATATCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGa > 1:2848774/1‑93 (MQ=255)
tataTCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGaaa < 2:392808/93‑1 (MQ=255)
tataTCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGaaa > 2:3738220/1‑93 (MQ=255)
atatCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAAt > 1:2462110/1‑93 (MQ=255)
tatCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATa > 1:4377652/1‑93 (MQ=255)
tatCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATa < 2:2644327/93‑1 (MQ=255)
tatCATCGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAAACAGGTGCACTGCTCGAGCAACTGCTGGAAGAAGCGCAAGAACGCGTGACATa > 1:4703744/1‑93 (MQ=255)
tcatcGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAc < 1:1427997/93‑1 (MQ=255)
catcGCCGCGA‑TGATCCTGTCCCGTAAATCCGCCAAACTAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAcc < 1:4554549/93‑1 (MQ=255)
atcGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAccc < 2:713539/93‑1 (MQ=255)
atcGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAccc > 2:946707/1‑93 (MQ=255)
atcGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAccc > 2:1403258/1‑93 (MQ=255)
tcGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAcccc > 2:4981569/1‑93 (MQ=255)
tcGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAcccc > 1:5342722/1‑93 (MQ=255)
tcGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAcccc < 1:1501958/93‑1 (MQ=255)
tcGCCGCGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAAcccc > 2:1740790/1‑93 (MQ=255)
gccgcGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTc > 2:4559995/1‑93 (MQ=255)
gccgcGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTc > 1:1643924/1‑93 (MQ=255)
gccgcGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTc < 1:84986/93‑1 (MQ=255)
gccgcGA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTc < 2:3824573/93‑1 (MQ=255)
gcgA‑TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCggg < 2:804015/93‑1 (MQ=255)
ga‑tgatcCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGcc < 1:5104808/93‑1 (MQ=255)
|
AGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGA‑TGAT‑CTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCG > NC_000913/3005306‑3005485
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑CTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGC > NC_000913/3005306‑3005491
|
AGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑C < SRR4302532.5089484/94‑1 (MQ=60)
GAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑CC < SRR4302532.4799833/94‑1 (MQ=60)
AGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cctg < SRR4302532.2048243/94‑4 (MQ=60)
AGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cctg > SRR4302532.3196100/1‑91 (MQ=60)
AGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cctg < SRR4302532.343029/94‑4 (MQ=60)
AGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑Cctg > SRR4302532.3837738/1‑91 (MQ=60)
GTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTC > SRR4302532.239578/1‑94 (MQ=60)
GTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTC > SRR4302532.239579/1‑94 (MQ=60)
GTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTC < SRR4302532.511496/94‑1 (MQ=60)
TGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCC < SRR4302532.1802542/94‑1 (MQ=60)
TGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCC > SRR4302532.6037050/1‑94 (MQ=60)
GAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC < SRR4302532.1316001/94‑1 (MQ=60)
GAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC > SRR4302532.3506740/1‑94 (MQ=60)
GAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC > SRR4302532.661740/1‑94 (MQ=60)
GAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCC > SRR4302532.4683101/1‑94 (MQ=60)
AGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGT > SRR4302532.647366/1‑94 (MQ=60)
AGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGT > SRR4302532.647367/1‑94 (MQ=60)
GTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTA > SRR4302532.5364877/1‑94 (MQ=60)
GACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCTCGTAAA < SRR4302532.6101242/94‑1 (MQ=60)
GACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAA > SRR4302532.6320715/1‑94 (MQ=60)
ACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAAT < SRR4302532.1223820/94‑1 (MQ=60)
ACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAAT > SRR4302532.812938/1‑94 (MQ=60)
ACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAAT < SRR4302532.838772/94‑1 (MQ=60)
ACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAAT > SRR4302532.1177125/1‑94 (MQ=60)
CTCAAGGCGGATTCGAAAAATGCCGTATCGCTTCCTACAAAGAAGCCAGCTGGAAGCCTTTTATCATCGCCGCGATGATCCTGTCCCGTAAATA < SRR4302532.1931855/94‑1 (MQ=60)
TGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATAC < SRR4302532.2466789/94‑1 (MQ=60)
TGAAGGCGTATGCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATAC < SRR4302532.4745067/94‑1 (MQ=60)
GAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACG > SRR4302532.4730948/1‑94 (MQ=60)
GGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCA < SRR4302532.1040075/94‑1 (MQ=60)
GGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCA < SRR4302532.4629460/94‑1 (MQ=60)
GCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAA > SRR4302532.1847274/1‑94 (MQ=60)
GCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAA < SRR4302532.3873602/94‑1 (MQ=60)
GCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAA < SRR4302532.3873603/94‑1 (MQ=60)
CGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAA > SRR4302532.3171663/1‑94 (MQ=60)
CGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAA > SRR4302532.1702363/1‑94 (MQ=60)
GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAAC > SRR4302532.775718/1‑94 (MQ=60)
GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAAC > SRR4302532.4383959/1‑94 (MQ=60)
GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAAC > SRR4302532.140372/1‑94 (MQ=60)
GTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAAC > SRR4302532.2551701/1‑94 (MQ=60)
TATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACC > SRR4302532.2342588/1‑94 (MQ=60)
TATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACC > SRR4302532.6029824/1‑94 (MQ=60)
ATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCA > SRR4302532.880289/1‑94 (MQ=60)
ATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCA > SRR4302532.2963058/1‑94 (MQ=60)
TCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGG < SRR4302532.1514667/94‑1 (MQ=60)
TCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGG < SRR4302532.1514668/94‑1 (MQ=60)
TCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGG < SRR4302532.2444488/94‑1 (MQ=60)
CGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGG > SRR4302532.5521107/1‑94 (MQ=60)
GAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTG < SRR4302532.272164/94‑1 (MQ=60)
AAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGC > SRR4302532.5890666/1‑94 (MQ=60)
AAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGC > SRR4302532.2524511/1‑94 (MQ=60)
AAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCAC > SRR4302532.4612783/1‑94 (MQ=60)
AAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCAC > SRR4302532.5683328/1‑94 (MQ=60)
AAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCAC > SRR4302532.5089483/1‑94 (MQ=60)
ATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTG > SRR4302532.6291298/1‑94 (MQ=60)
ACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCT < SRR4302532.3296555/94‑1 (MQ=60)
CGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCG > SRR4302532.711582/1‑94 (MQ=60)
CGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTACCGTAAATACGCCAAACCAGGTGCACTGCTCG > SRR4302532.3345777/1‑94 (MQ=60)
GTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGA > SRR4302532.3863726/1‑94 (MQ=60)
GTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGA < SRR4302532.5561536/94‑1 (MQ=60)
ATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGC < SRR4302532.3431443/94‑1 (MQ=60)
ATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGC > SRR4302532.3465995/1‑94 (MQ=60)
TCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCA < SRR4302532.4788375/94‑1 (MQ=60)
TCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCA < SRR4302532.2139402/94‑1 (MQ=60)
CGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAA > SRR4302532.3626305/1‑94 (MQ=60)
GCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAAC > SRR4302532.1849615/1‑94 (MQ=60)
CTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACT > SRR4302532.4380359/1‑94 (MQ=60)
TACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTG > SRR4302532.5341732/1‑94 (MQ=60)
TACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTG < SRR4302532.1144211/94‑1 (MQ=60)
TACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAAACAGGTGCACTGCTCGAGCAACTG > SRR4302532.3283160/1‑94 (MQ=60)
CCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCT > SRR4302532.2493441/1‑94 (MQ=60)
CCTACAAAGAAGCCAGCTGGAAGCATTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTTCACTGCTCGAGCAACTGCT < SRR4302532.2592365/94‑1 (MQ=60)
CTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTG > SRR4302532.5574763/1‑94 (MQ=60)
TACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGA > SRR4302532.1331952/1‑94 (MQ=60)
TACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGA < SRR4302532.4832106/94‑1 (MQ=60)
ACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAA < SRR4302532.782225/94‑1 (MQ=60)
ACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAA > SRR4302532.413270/1‑94 (MQ=60)
ACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAA < SRR4302532.4318376/94‑1 (MQ=60)
CAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGCAA > SRR4302532.5053920/1‑94 (MQ=60)
CAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAA > SRR4302532.300823/1‑94 (MQ=60)
AAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAG > SRR4302532.3715586/1‑94 (MQ=60)
AGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAA < SRR4302532.372908/94‑1 (MQ=60)
AAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGC < SRR4302532.2284576/94‑1 (MQ=60)
AAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGC < SRR4302532.1824467/94‑1 (MQ=60)
AGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCG > SRR4302532.769846/1‑94 (MQ=60)
GCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGC < SRR4302532.4789412/94‑1 (MQ=60)
ACCAGCTGGAAGCCTTATATCATCGCCGCTATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGC < SRR4302532.1449876/94‑1 (MQ=60)
CCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCA > SRR4302532.3733820/1‑94 (MQ=60)
CAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAA < SRR4302532.120060/94‑1 (MQ=60)
CAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAA > SRR4302532.3482009/1‑94 (MQ=60)
AGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAG < SRR4302532.1172287/94‑1 (MQ=60)
AGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAG < SRR4302532.680419/94‑1 (MQ=60)
TGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAC > SRR4302532.3211739/1‑94 (MQ=60)
TGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAC > SRR4302532.1918108/1‑94 (MQ=60)
TGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAAC > SRR4302532.1746499/1‑94 (MQ=60)
GGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACG < SRR4302532.2586036/94‑1 (MQ=60)
GGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACG < SRR4302532.4108317/94‑1 (MQ=60)
GCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTG < SRR4302532.2404528/94‑1 (MQ=60)
CCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGA > SRR4302532.4408228/1‑94 (MQ=60)
CCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGA > SRR4302532.2944010/1‑94 (MQ=60)
CTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAA > SRR4302532.2120885/1‑94 (MQ=60)
TTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAA > SRR4302532.1555845/1‑94 (MQ=60)
TATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAAT > SRR4302532.2544016/1‑94 (MQ=60)
ATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATA > SRR4302532.4526293/1‑94 (MQ=60)
ATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATA > SRR4302532.3964265/1‑94 (MQ=60)
ATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATA > SRR4302532.5395537/1‑94 (MQ=60)
ATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAAACAGGTGCACTGCTCGAGCAACTGCTGGAAGAAGCGCAAGAACGCGTGACATA > SRR4302532.4864219/1‑94 (MQ=60)
TATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAA < SRR4302532.974726/94‑1 (MQ=60)
TCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACC < SRR4302532.1475984/94‑1 (MQ=60)
CATCGCCGCGATGATCCTGTCCCGTAAATCCGCCAAACTAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCC < SRR4302532.4709956/94‑1 (MQ=60)
CATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCC > SRR4302532.5148527/1‑94 (MQ=60)
ATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCC > SRR4302532.5528076/1‑94 (MQ=60)
TCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCT < SRR4302532.1552650/94‑1 (MQ=60)
CGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTC < SRR4302532.4854599/94‑1 (MQ=60)
CGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTC > SRR4302532.1699606/1‑94 (MQ=60)
CGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTC < SRR4302532.4134090/94‑1 (MQ=60)
GCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCG < SRR4302532.87990/94‑1 (MQ=60)
GCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCG < SRR4302532.6346242/94‑1 (MQ=60)
CCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGG < SRR4302532.4420227/94‑1 (MQ=60)
CCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGG > SRR4302532.5854898/1‑94 (MQ=60)
CGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGG > SRR4302532.4690031/1‑94 (MQ=60)
CGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGG < SRR4302532.2327909/94‑1 (MQ=60)
CGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGG > SRR4302532.1724153/1‑94 (MQ=60)
CGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCC > SRR4302532.732320/1‑94 (MQ=60)
GATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCG < SRR4302532.5280301/94‑1 (MQ=60)
ATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGA > SRR4302532.6307670/1‑94 (MQ=60)
TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGAT > SRR4302532.3534011/1‑94 (MQ=60)
TGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACCGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCCGGCCGAC > SRR4302532.4451750/1‑94 (MQ=60)
GATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATC > SRR4302532.2441429/1‑94 (MQ=60)
atcCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCA < SRR4302532.1129816/91‑1 (MQ=60)
atcCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCA > SRR4302532.5889538/4‑94 (MQ=60)
tcCTGTCCCGTAAATACGCCAAATCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAG < SRR4302532.3598871/92‑1 (MQ=60)
tcCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAG < SRR4302532.758596/92‑1 (MQ=60)
tcCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAG > SRR4302532.2879945/3‑94 (MQ=60)
tcCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAG > SRR4302532.2963440/3‑94 (MQ=60)
tcCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAG < SRR4302532.1298696/92‑1 (MQ=60)
C‑CTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCCGC > SRR4302532.3047408/1‑94 (MQ=60)
C‑CTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGC < SRR4302532.1996421/94‑1 (MQ=60)
|
AGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGAT‑CTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAACCCCTCGGGCCGATCAGC > NC_000913/3005306‑3005491
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
