Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,236,758 |
Δ1 bp |
coding (537/966 nt) |
ygjT → |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,236,757 | 0 | T | . | 99.6%
| 1144.1
/ ‑3.1
| 246 | coding (536/966 nt) | ygjT | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base . (111/134); total (111/135) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 271 total aligned reads displayed.
GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTA > NC_000913/3236666‑3236845
|
gCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGt < 2:78802/93‑1 (MQ=255)
gCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGt > 2:1212973/1‑93 (MQ=255)
gCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGt < 1:5529710/93‑1 (MQ=255)
cTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGAAAAGCCGCTGGGGCGCTGGCTACGCGGtca > 1:2054423/1‑91 (MQ=255)
ttCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcat > 1:5120605/1‑90 (MQ=255)
ccTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCAttt > 1:911020/1‑93 (MQ=255)
ccTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCAttt > 1:3385819/1‑93 (MQ=255)
ccTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCAttt < 1:1248843/93‑1 (MQ=255)
ctgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTg > 2:4273726/1‑93 (MQ=255)
tgctgTTTACCGGCGTTAAGATGGCCCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgc < 2:4866193/93‑1 (MQ=255)
tgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgg > 1:1391638/1‑92 (MQ=255)
tgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgc > 1:2122696/1‑93 (MQ=255)
tgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgc < 2:5764439/93‑1 (MQ=255)
gctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgcg < 2:2573602/93‑1 (MQ=255)
tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa < 2:5467105/93‑1 (MQ=255)
tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa < 2:3552235/93‑1 (MQ=255)
tttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATg < 1:2438155/93‑1 (MQ=255)
ttcccGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGa < 2:2228251/90‑1 (MQ=255)
ttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGa < 2:753902/93‑1 (MQ=255)
aCCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAcc > 1:4500509/1‑93 (MQ=255)
aCCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAcc > 1:4863969/1‑93 (MQ=255)
ccGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCg < 2:6091175/93‑1 (MQ=255)
cGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGa < 1:5196814/93‑1 (MQ=255)
cGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGa > 2:4416179/1‑93 (MQ=255)
ggCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGac < 2:4834194/93‑1 (MQ=255)
gTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAcc > 1:150953/1‑93 (MQ=255)
gAAGATGCCGCTCGCCCAGGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAt < 2:2999485/93‑1 (MQ=255)
aaGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATc > 1:1648784/1‑93 (MQ=255)
aaGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATc < 2:1408308/93‑1 (MQ=255)
aaGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATc < 2:230391/93‑1 (MQ=255)
gATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGa > 2:4029179/1‑93 (MQ=255)
tGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACa > 2:5979248/1‑93 (MQ=255)
tGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACa > 2:5022932/1‑93 (MQ=255)
ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa > 2:3750787/1‑93 (MQ=255)
ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa < 2:4667962/93‑1 (MQ=255)
ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa < 2:5810793/93‑1 (MQ=255)
ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa < 1:5806762/93‑1 (MQ=255)
gcgcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAc < 2:326659/93‑1 (MQ=255)
gcgcTCGCCCATGAAGATGAATCAGGCATTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAc < 2:5595763/93‑1 (MQ=255)
gcgcTCGCCCATGAAGATGAATCAGGCATGGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAc < 2:1356018/93‑1 (MQ=255)
gcgtCGCCCATGAAGATCAATCAGGCATTGGCGTCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACg < 2:2379078/90‑1 (MQ=255)
gcgcGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa < 1:4111348/90‑1 (MQ=255)
gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa < 2:886961/93‑1 (MQ=255)
gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa < 1:5853340/93‑1 (MQ=255)
gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa > 1:5270482/1‑93 (MQ=255)
gcTCGCCCATGAAGATGAATCAGCCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa < 2:2762223/93‑1 (MQ=255)
cTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAg > 2:5692149/1‑93 (MQ=255)
cTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAg < 1:2656342/93‑1 (MQ=255)
tggCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGc < 1:1174605/91‑1 (MQ=255)
tCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGc > 2:4522412/1‑93 (MQ=255)
tCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGc > 1:3937486/1‑93 (MQ=255)
tCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGc < 2:1530377/93‑1 (MQ=255)
tCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGc > 2:4232865/1‑93 (MQ=255)
cGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCa < 1:3614237/93‑1 (MQ=255)
gCCCAGAAAGATGAATCAGGCATTGTCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAt < 2:1028114/93‑1 (MQ=255)
cccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt < 1:4283069/93‑1 (MQ=255)
ccaaTGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt < 2:3075328/90‑1 (MQ=255)
ccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAttt < 1:4599728/93‑1 (MQ=255)
cATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTc < 1:182181/93‑1 (MQ=255)
cATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTc > 1:2495342/1‑93 (MQ=255)
cATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTc > 1:2005198/1‑93 (MQ=255)
tGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCtt > 1:2544356/1‑93 (MQ=255)
tGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCtt > 1:994103/1‑93 (MQ=255)
aaGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg > 1:5743422/1‑93 (MQ=255)
gATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgtg > 1:1727044/1‑93 (MQ=255)
aTGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGc > 2:1726106/1‑93 (MQ=255)
gaTCCGGCATGGGCGCCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTa < 2:553293/92‑1 (MQ=255)
aaTCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTa < 1:1012768/93‑1 (MQ=255)
tCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAg < 1:2801213/93‑1 (MQ=255)
tCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAg < 1:2843936/93‑1 (MQ=255)
gaGGCATTGGCGACAAGCCGCTTGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGa < 2:2115914/92‑1 (MQ=255)
cAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGa < 1:814524/93‑1 (MQ=255)
gCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATg < 2:457487/93‑1 (MQ=255)
gCATGGGCGATAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCCCATGACCCACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATg < 1:3262490/93‑1 (MQ=255)
gCAGTGGCGCCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATg < 2:279623/93‑1 (MQ=255)
cATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATgg > 1:27190/1‑93 (MQ=255)
aTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGa < 1:4660742/93‑1 (MQ=255)
ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt > 2:2681708/1‑93 (MQ=255)
tGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAtt < 2:5970815/93‑1 (MQ=255)
gCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGc < 2:1873786/93‑1 (MQ=255)
aCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGt < 1:4131889/93‑1 (MQ=255)
aCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGt > 1:3081694/1‑93 (MQ=255)
agccgcTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAcc < 1:3855100/90‑2 (MQ=255)
tGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCacac > 1:5825055/1‑93 (MQ=255)
ggTGCGCTGGCTACGC‑GTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACAcc < 1:525144/93‑1 (MQ=255)
tGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGc < 2:1616038/93‑1 (MQ=255)
tGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGc > 2:710221/1‑93 (MQ=255)
cgcTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTg > 2:2847711/1‑93 (MQ=255)
cgcTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTg < 1:5412849/93‑1 (MQ=255)
gcTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGa < 2:5180479/93‑1 (MQ=255)
gcTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGa > 1:599059/1‑93 (MQ=255)
gcTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGa < 1:1732427/93‑1 (MQ=255)
tGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATg > 2:3694057/1‑93 (MQ=255)
tGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATg > 1:784798/1‑93 (MQ=255)
ggCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGc < 2:5134260/93‑1 (MQ=255)
gCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCt < 1:3215191/93‑1 (MQ=255)
gCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCt < 1:3735692/93‑1 (MQ=255)
cTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTg < 2:3877080/93‑1 (MQ=255)
cTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTg > 2:2927173/1‑93 (MQ=255)
aCGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGt < 2:2719828/93‑1 (MQ=255)
|
GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTA > NC_000913/3236666‑3236845
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTACTGATT > NC_000913/3236666‑3236851
|
GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTC < SRR4302532.5721608/94‑1 (MQ=60)
CTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCAT < SRR4302532.3402007/94‑1 (MQ=60)
CTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCAT > SRR4302532.5296736/1‑94 (MQ=60)
CTTCCTGCCGTTTGCCGGCGTGAGGATGGCGCGCGCCCATGAAGATGACTCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCAT < SRR4302532.4437777/94‑1 (MQ=60)
TTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATT > SRR4302532.1754051/1‑94 (MQ=60)
TCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTT > SRR4302532.942145/1‑94 (MQ=60)
TCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTT < SRR4302532.1106076/94‑1 (MQ=60)
TCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTT > SRR4302532.3499063/1‑94 (MQ=60)
CCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTG > SRR4302532.6006874/1‑94 (MQ=60)
CCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTG > SRR4302532.4068363/1‑94 (MQ=60)
CCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTG < SRR4302532.1290631/94‑1 (MQ=60)
CCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTG > SRR4302532.5227229/1‑94 (MQ=60)
CTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGC > SRR4302532.2193609/1‑94 (MQ=60)
CTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGC > SRR4302532.5111206/1‑94 (MQ=60)
TGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATTAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑GCATTTGCG > SRR4302532.1259604/1‑94 (MQ=60)
TGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCG < SRR4302532.314858/94‑1 (MQ=60)
gctttttccgggctgaAAGATGGCCCTCGCCCATGAAGATGAATCAGCCATTGGCGACAAGCCGCTGTTGCGCTGTCTACGCGG‑TCATTTGCGC < SRR4302532.3997265/78‑1 (MQ=47)
GCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGC > SRR4302532.3686665/1‑94 (MQ=60)
CTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCA > SRR4302532.2429729/1‑94 (MQ=60)
GTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCCTTTGCGCATG > SRR4302532.266311/1‑94 (MQ=60)
TTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGA < SRR4302532.2519221/94‑1 (MQ=60)
TTACCGGAGTGAGGATGGCGCTCGCCCATGAAGATGAATCAGGCTTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAC < SRR4302532.1386759/94‑1 (MQ=60)
TACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACC > SRR4302532.5031273/1‑94 (MQ=60)
TACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACC > SRR4302532.4762511/1‑94 (MQ=60)
TACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACC > SRR4302532.4654159/1‑94 (MQ=60)
TACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACC < SRR4302532.1450159/94‑1 (MQ=60)
ACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCG > SRR4302532.2580856/1‑94 (MQ=60)
ACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCG < SRR4302532.4183043/94‑1 (MQ=60)
ACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCG < SRR4302532.3481469/94‑1 (MQ=60)
ACCGGCGTGAAGATGGCGCGCGCCCATGAAGATGAATCAGCCATTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCG < SRR4302532.1030002/94‑1 (MQ=60)
CGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGAC < SRR4302532.5375953/94‑1 (MQ=60)
GCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAC < SRR4302532.1567429/94‑1 (MQ=60)
CGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACC > SRR4302532.156003/1‑94 (MQ=60)
GTGAAGATGGCGCTCGCGCATGAAGATGAATGAGGCATGGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCA < SRR4302532.2646925/94‑1 (MQ=60)
TGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAT < SRR4302532.4194618/94‑1 (MQ=60)
GAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATC > SRR4302532.1704647/1‑94 (MQ=60)
AGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGA > SRR4302532.427059/1‑94 (MQ=60)
GGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAC < SRR4302532.6008521/94‑1 (MQ=60)
GCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACG < SRR4302532.3318567/94‑1 (MQ=60)
CGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGG > SRR4302532.5432872/1‑94 (MQ=60)
CGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGA > SRR4302532.5452231/1‑94 (MQ=60)
CGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACCA > SRR4302532.2089154/1‑94 (MQ=60)
GCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAG < SRR4302532.6056357/94‑1 (MQ=60)
GCGCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAG < SRR4302532.4249356/94‑1 (MQ=60)
GCCCGCCCATGAAGATGAGTCAGGCATGGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTGGCGCATGACCGACACCATCGACAACGAG < SRR4302532.1016240/94‑1 (MQ=60)
CTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGC > SRR4302532.4070170/1‑94 (MQ=60)
CTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGC < SRR4302532.1715958/94‑1 (MQ=60)
CTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGC < SRR4302532.2745497/94‑1 (MQ=60)
CTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGC < SRR4302532.1810060/94‑1 (MQ=60)
TGGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCA < SRR4302532.1213855/94‑1 (MQ=60)
TCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCA < SRR4302532.5718676/94‑1 (MQ=60)
CGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAT < SRR4302532.3735119/94‑1 (MQ=60)
CGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAT < SRR4302532.6031773/94‑1 (MQ=60)
CCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT < SRR4302532.4427416/94‑1 (MQ=60)
CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC > SRR4302532.2072053/1‑94 (MQ=60)
CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC > SRR4302532.3322587/1‑94 (MQ=60)
CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC < SRR4302532.4756553/94‑1 (MQ=60)
CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC < SRR4302532.27863/94‑1 (MQ=60)
CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC > SRR4302532.2578538/1‑94 (MQ=60)
CAATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC < SRR4302532.6017923/94‑1 (MQ=60)
CATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT < SRR4302532.5455388/94‑1 (MQ=60)
CATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT > SRR4302532.4543844/1‑94 (MQ=60)
CATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT < SRR4302532.188308/94‑1 (MQ=60)
CATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT < SRR4302532.256570/94‑1 (MQ=60)
ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT > SRR4302532.92137/1‑94 (MQ=60)
ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT > SRR4302532.1028007/1‑94 (MQ=60)
ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT > SRR4302532.2629217/1‑94 (MQ=60)
TGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTT > SRR4302532.5355115/1‑94 (MQ=60)
GAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTG > SRR4302532.5943360/1‑94 (MQ=60)
GAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTG < SRR4302532.3304852/94‑1 (MQ=60)
AAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGT > SRR4302532.3974527/1‑94 (MQ=60)
AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG > SRR4302532.4724734/1‑94 (MQ=60)
AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG > SRR4302532.1785192/1‑94 (MQ=60)
GATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGC < SRR4302532.1928608/94‑1 (MQ=60)
ATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCG < SRR4302532.4011411/94‑1 (MQ=60)
AATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAA < SRR4302532.1047174/94‑1 (MQ=60)
AATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAA > SRR4302532.2526507/1‑94 (MQ=60)
AATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAA < SRR4302532.4313914/94‑1 (MQ=60)
TCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGA < SRR4302532.2895070/94‑1 (MQ=60)
TCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGA < SRR4302532.2938994/94‑1 (MQ=60)
CAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAA > SRR4302532.5444157/1‑94 (MQ=60)
CAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAA < SRR4302532.842313/94‑1 (MQ=60)
CAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAA > SRR4302532.1321380/1‑94 (MQ=60)
CAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAA < SRR4302532.6108402/94‑1 (MQ=60)
CAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAA < SRR4302532.842312/94‑1 (MQ=60)
AGTCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT < SRR4302532.1255208/94‑1 (MQ=60)
GGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATG < SRR4302532.5736055/94‑1 (MQ=60)
GGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATG < SRR4302532.5936883/94‑1 (MQ=60)
GCATTGGCTAAAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG < SRR4302532.6167244/94‑1 (MQ=60)
GCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG > SRR4302532.28252/1‑94 (MQ=60)
GCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG > SRR4302532.6051281/1‑94 (MQ=60)
GCATGGGCGATAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCCCATGACCCACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG < SRR4302532.3370970/94‑1 (MQ=60)
ATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT < SRR4302532.4819639/94‑1 (MQ=60)
ATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT > SRR4302532.1854173/1‑94 (MQ=60)
ATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT > SRR4302532.5382818/1‑94 (MQ=60)
TGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTG < SRR4302532.2830007/94‑1 (MQ=60)
ggacaagcCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTG < SRR4302532.2800911/86‑1 (MQ=60)
GACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT > SRR4302532.4834596/1‑94 (MQ=60)
GACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT > SRR4302532.3183609/1‑94 (MQ=60)
ACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTA < SRR4302532.4940177/94‑1 (MQ=60)
ACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTA > SRR4302532.5986100/1‑94 (MQ=60)
ACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTA < SRR4302532.4270509/94‑1 (MQ=60)
agcCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGC > SRR4302532.950641/4‑94 (MQ=60)
agcCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACCC < SRR4302532.3985256/91‑1 (MQ=60)
gcCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCC < SRR4302532.1787042/92‑1 (MQ=60)
CCTGGTGCGATGGCTACGCGG‑TCATTTTCGCATGACCTACACCATCGACAACTAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACA < SRR4302532.4376369/94‑1 (MQ=60)
CTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACAC < SRR4302532.3838556/94‑1 (MQ=60)
CTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACAC < SRR4302532.3838555/94‑1 (MQ=60)
CTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACAC > SRR4302532.6027323/1‑94 (MQ=60)
CTGGTGCGCTGGCTACGCGG‑TCAGTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACAC < SRR4302532.3619842/94‑1 (MQ=60)
TGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACC < SRR4302532.1947077/94‑1 (MQ=60)
TGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACC > SRR4302532.5399676/1‑94 (MQ=60)
TGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACC > SRR4302532.2897137/1‑94 (MQ=60)
GGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCG < SRR4302532.6348788/94‑1 (MQ=60)
GGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCG < SRR4302532.1630214/94‑1 (MQ=60)
GGTGCGCTGGCTACGC‑GTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCG < SRR4302532.543462/94‑1 (MQ=60)
TGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCT < SRR4302532.5712195/94‑1 (MQ=60)
CGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGA > SRR4302532.619970/1‑94 (MQ=60)
CGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGA < SRR4302532.5600392/94‑1 (MQ=60)
CGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGA > SRR4302532.2113319/1‑94 (MQ=60)
GCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGAT < SRR4302532.1790742/94‑1 (MQ=60)
GCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGAT < SRR4302532.5943691/94‑1 (MQ=60)
GCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGAT < SRR4302532.2242092/94‑1 (MQ=60)
CTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATG > SRR4302532.811759/1‑94 (MQ=60)
GGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCT < SRR4302532.821393/94‑1 (MQ=60)
GGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCT < SRR4302532.821394/94‑1 (MQ=60)
GCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTG < SRR4302532.3861202/94‑1 (MQ=60)
GCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTG < SRR4302532.3321951/94‑1 (MQ=60)
CTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGG > SRR4302532.3013477/1‑94 (MQ=60)
TACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGT < SRR4302532.4682874/94‑1 (MQ=60)
ACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTA < SRR4302532.2813688/94‑1 (MQ=60)
CGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTAC < SRR4302532.2189435/94‑1 (MQ=60)
GCGG‑TCATTTGCGCATGGCCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTACT > SRR4302532.934955/1‑94 (MQ=60)
CGG‑TCATTTGCGCATGACCGACACCATCGCCAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGACACACGGCTGATGCTGGTACTG > SRR4302532.5301095/1‑94 (MQ=60)
GTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTACTGAT < SRR4302532.6173379/94‑1 (MQ=60)
GTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTACTGAT > SRR4302532.419331/1‑94 (MQ=60)
GTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTACTGAT < SRR4302532.4069290/94‑1 (MQ=60)
TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTACTGATT > SRR4302532.5526993/1‑94 (MQ=60)
|
GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTACTGATT > NC_000913/3236666‑3236851
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
