Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,870,631 Δ1 bp coding (610/1764 nt) dgoA ← 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,870,6300C.100.0% 1107.5 / NA 235coding (611/1764 nt)dgoA2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (135/100);  total (135/100)

Only 100 of 266 total aligned reads displayed.

CCCAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCACCTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCC  >  NC_000913/3870538‑3870721
                                                                                            |                                                                                           
cccAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCAc                                                                                             <  2:506526/93‑1 (MQ=255)
cccAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCAc                                                                                             >  2:2853755/1‑93 (MQ=255)
 ccAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCAct                                                                                            >  1:351000/1‑92 (MQ=255)
  cAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCActg                                                                                           >  1:606037/1‑91 (MQ=255)
   aaCCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGAAAACGATACGTGGTAATTTTGGTGATTTTCATTGCActgc                                                                                          >  2:620348/1‑90 (MQ=255)
     ccGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCct                                                                                       >  2:4334842/1‑93 (MQ=255)
     ccGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCct                                                                                       <  2:4475205/93‑1 (MQ=255)
      cGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCctc                                                                                      >  2:1987904/1‑93 (MQ=255)
       gACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCctct                                                                                     >  2:972488/1‑93 (MQ=255)
       gACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCctct                                                                                     <  1:363317/93‑1 (MQ=255)
       gACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCctct                                                                                     <  2:2941261/93‑1 (MQ=255)
        aCCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCtctc                                                                                    <  2:4727098/93‑1 (MQ=255)
        aCCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCtctc                                                                                    <  1:6038341/93‑1 (MQ=255)
         ccACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGAGGTACTTTTGGCGATTTTCATTGCA‑CTGCCTCTCg                                                                                   >  2:3521413/1‑93 (MQ=255)
           aCGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGAt                                                                                 >  2:3006252/1‑93 (MQ=255)
           aCGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGAt                                                                                 <  2:1126196/93‑1 (MQ=255)
            cGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATa                                                                                >  1:1549288/1‑93 (MQ=255)
            cGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATa                                                                                <  2:2806621/93‑1 (MQ=255)
             gCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATAc                                                                               >  1:3670167/1‑93 (MQ=255)
             gCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATAc                                                                               <  2:1400648/93‑1 (MQ=255)
              ccTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACg                                                                              >  1:1984664/1‑93 (MQ=255)
                 tCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCt                                                                           >  1:3224509/1‑93 (MQ=255)
                  cATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCtt                                                                          >  1:657183/1‑93 (MQ=255)
                  cATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCtt                                                                          <  2:685726/93‑1 (MQ=255)
                  cATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCtt                                                                          <  1:4438948/93‑1 (MQ=255)
                   aTCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTa                                                                         <  2:592465/93‑1 (MQ=255)
                   aTCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTa                                                                         >  1:5521704/1‑93 (MQ=255)
                    tCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTaa                                                                        >  1:1444156/1‑93 (MQ=255)
                    acgttttCAATTTCCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTaa                                                                        <  2:1629448/89‑1 (MQ=255)
                     cGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAAc                                                                       <  2:4848993/93‑1 (MQ=255)
                      ggTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACa                                                                      >  1:5437339/1‑93 (MQ=255)
                      ggTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACa                                                                      >  1:4350609/1‑93 (MQ=255)
                      cgTTTCAATTTTCAGGAACATCCAGCGGGCAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACa                                                                      <  1:1161048/92‑1 (MQ=255)
                       gTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACaa                                                                     >  1:2332636/1‑93 (MQ=255)
                         ttCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACACAt                                                                   >  1:3537310/1‑93 (MQ=255)
                         ttCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAAt                                                                   >  1:1725849/1‑93 (MQ=255)
                           cAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAAtgc                                                                 <  2:5020412/93‑1 (MQ=255)
                             aTTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAAtgctg                                                               >  2:877925/1‑93 (MQ=255)
                              ttttCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAAtgctgc                                                              >  1:4123227/1‑93 (MQ=255)
                                ttCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAAtgctgctg                                                            <  2:2280128/93‑1 (MQ=255)
                                ttCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAAtgctgctg                                                            <  2:267403/93‑1 (MQ=255)
                                 tCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAAtgctgctgc                                                           >  1:3111601/1‑93 (MQ=255)
                                 tCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAAtgctgctgc                                                           >  2:1856206/1‑93 (MQ=255)
                                  cAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGctgctgcc                                                          <  2:3900095/93‑1 (MQ=255)
                                    ggAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGctgctgcctg                                                        >  1:3308364/1‑93 (MQ=255)
                                      aaCATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGctgctgcctgct                                                      >  2:4360243/1‑93 (MQ=255)
                                        cATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGctgctgcctgctgc                                                    <  1:3849582/93‑1 (MQ=255)
                                        cATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGctgctgcctgctgc                                                    <  2:4191446/93‑1 (MQ=255)
                                          tCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTgcgc                                                  >  1:500252/1‑93 (MQ=255)
                                           ccAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGcgcg                                                 <  1:5318864/93‑1 (MQ=255)
                                             aGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCggg                                               >  1:5141460/1‑92 (MQ=255)
                                              gCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTg                                              >  1:5506721/1‑93 (MQ=255)
                                              gCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTg                                              >  1:486007/1‑93 (MQ=255)
                                              gCGGGGAGGTAAACGATACGTGGGAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTg                                              >  1:1582450/1‑93 (MQ=255)
                                                ggggAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTgcg                                            >  2:6074295/1‑93 (MQ=255)
                                                 gggAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTgcgc                                           <  1:1632668/93‑1 (MQ=255)
                                                   gAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGctc                                         <  1:4747534/93‑1 (MQ=255)
                                                      gTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTAc                                      <  1:1224638/93‑1 (MQ=255)
                                                      gTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTAc                                      >  2:3653766/1‑93 (MQ=255)
                                                        aaaCGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACgg                                    >  1:1315393/1‑93 (MQ=255)
                                                         aaCGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGa                                   >  2:3997999/1‑93 (MQ=255)
                                                            gATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTg                                >  1:1935761/1‑93 (MQ=255)
                                                              tACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGcc                              >  1:1231168/1‑93 (MQ=255)
                                                              tACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGcc                              >  1:2497736/1‑93 (MQ=255)
                                                               aCGTGGCAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGccc                             >  1:633750/1‑93 (MQ=255)
                                                                 gTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCgg                           >  2:4573874/1‑93 (MQ=255)
                                                                 gTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCgg                           >  1:2648803/1‑93 (MQ=255)
                                                                 gTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCgg                           >  2:5742311/1‑93 (MQ=255)
                                                                  tGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGgc                          <  2:535233/93‑1 (MQ=255)
                                                                  tGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGgc                          >  2:5885102/1‑93 (MQ=255)
                                                                  ggatAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGgc                          <  1:2708546/90‑1 (MQ=255)
                                                                    gTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGgcgc                        <  2:4272753/93‑1 (MQ=255)
                                                                       aTTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGAt                     >  1:777570/1‑93 (MQ=255)
                                                                        ttttGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATa                    >  2:3085092/1‑93 (MQ=255)
                                                                        ttttGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATa                    >  1:985711/1‑93 (MQ=255)
                                                                        ttttGGAGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTTACAAATGCTGCTGTCTGCTGTGCGGAGCGCCCTACGGATTGCCCTGCTCGaac                    >  1:5668798/1‑91 (MQ=255)
                                                                          ttGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATaga                  >  1:4655355/1‑93 (MQ=255)
                                                                          ttGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATaga                  <  1:5078719/93‑1 (MQ=255)
                                                                           tGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATagag                 >  2:5112599/1‑93 (MQ=255)
                                                                           tGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATagag                 >  1:2139472/1‑93 (MQ=255)
                                                                           tGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATagag                 >  2:5659612/1‑93 (MQ=255)
                                                                            ggTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAgaga                <  2:1187327/93‑1 (MQ=255)
                                                                             gTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGAt               <  2:847190/93‑1 (MQ=255)
                                                                             gTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCAGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGAt               >  1:3767567/1‑93 (MQ=255)
                                                                              tGATTTTCATTGCA‑CTGTCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATc              <  1:2366101/93‑1 (MQ=255)
                                                                              tGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATc              >  2:5512800/1‑93 (MQ=255)
                                                                              tGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATc              <  2:5780010/93‑1 (MQ=255)
                                                                              tGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTACCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATc              <  2:5270049/93‑1 (MQ=255)
                                                                               gATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCg             >  1:504875/1‑93 (MQ=255)
                                                                                aTTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGc            <  2:3224509/93‑1 (MQ=255)
                                                                                aTTTTCAGTGCA‑CTGCCCCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGc            <  2:614162/93‑1 (MQ=255)
                                                                                 ttttCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCt           <  1:2572042/93‑1 (MQ=255)
                                                                                 ttttCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCt           >  1:5361278/1‑93 (MQ=255)
                                                                                      aTTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTa      >  2:2469232/1‑93 (MQ=255)
                                                                                      aTTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTa      >  1:4014027/1‑93 (MQ=255)
                                                                                       ttGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTaa     >  1:139834/1‑93 (MQ=255)
                                                                                       ttGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTaa     <  2:243273/93‑1 (MQ=255)
                                                                                       ttGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTaa     <  1:5948211/93‑1 (MQ=255)
                                                                                       ttGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTaa     >  1:5388908/1‑93 (MQ=255)
                                                                                           cccTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCCCTGACTAAgcc  >  1:1033778/2‑93 (MQ=255)
                                                                                            |                                                                                           
CCCAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCACCTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCC  >  NC_000913/3870538‑3870721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCCAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCACCTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGC  >  NC_000913/3870538‑3870724
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cctaacctcccgCGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCACT                                                                                               <  SRR4302532.6255276/82‑1 (MQ=60)
CCCAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCACT                                                                                               >  SRR4302532.363151/1‑94 (MQ=60)
CCCAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCACT                                                                                               <  SRR4302532.3771495/94‑1 (MQ=60)
CCCAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCACT                                                                                               <  SRR4302532.3912520/94‑1 (MQ=60)
CCCAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCACT                                                                                               >  SRR4302532.5068717/1‑94 (MQ=60)
  CAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGC                                                                                            <  SRR4302532.3689482/94‑1 (MQ=60)
  CAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGC                                                                                            >  SRR4302532.5780015/1‑94 (MQ=60)
    ACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTACACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCT                                                                                          >  SRR4302532.1457520/1‑94 (MQ=60)
    ACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCT                                                                                          <  SRR4302532.4232706/94‑1 (MQ=60)
     CCGACCACGCCTTTATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTC                                                                                         <  SRR4302532.1232711/94‑1 (MQ=60)
       GACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTC                                                                                       <  SRR4302532.375895/94‑1 (MQ=60)
       GACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTC                                                                                       <  SRR4302532.6226537/94‑1 (MQ=60)
        GCCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCG                                                                                      <  SRR4302532.4877397/94‑1 (MQ=60)
        ACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCG                                                                                      <  SRR4302532.6246889/94‑1 (MQ=60)
         CCACGCCTTCATCGGTTTCACTTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTACTTTTGGTGATTTTCATTGCA‑CTGCCTCTCGA                                                                                     >  SRR4302532.3475374/1‑94 (MQ=60)
         CCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGA                                                                                     >  SRR4302532.2798602/1‑94 (MQ=60)
          CACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGAT                                                                                    <  SRR4302532.2660963/94‑1 (MQ=60)
          CACGCCGTCAGCTGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGAT                                                                                    <  SRR4302532.64241/94‑1 (MQ=60)
           ACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATA                                                                                   >  SRR4302532.1601638/1‑94 (MQ=60)
            CGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGCTAC                                                                                  >  SRR4302532.1894055/1‑94 (MQ=60)
            CGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATAC                                                                                  >  SRR4302532.3793455/1‑94 (MQ=60)
             GCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACG                                                                                 >  SRR4302532.2050592/1‑94 (MQ=60)
             CCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACG                                                                                 <  SRR4302532.5222948/94‑1 (MQ=60)
               CTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCC                                                                               >  SRR4302532.789419/1‑94 (MQ=60)
               CTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCC                                                                               <  SRR4302532.2845878/94‑1 (MQ=60)
               CTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCC                                                                               >  SRR4302532.5535453/1‑94 (MQ=60)
               CTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCC                                                                               >  SRR4302532.371036/1‑94 (MQ=60)
                TTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCT                                                                              >  SRR4302532.3331544/1‑94 (MQ=60)
                TTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCT                                                                              >  SRR4302532.2604244/1‑94 (MQ=60)
                 TCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTT                                                                             <  SRR4302532.2438623/94‑1 (MQ=60)
                 TCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTT                                                                             >  SRR4302532.679948/1‑94 (MQ=60)
                 TCATCGGTTGCAATTTTCAGGAACATCCAGCGTGGAGGTAAACGATACGTGGTAATGTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTT                                                                             <  SRR4302532.763547/94‑1 (MQ=60)
                  CATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTA                                                                            <  SRR4302532.6255313/94‑1 (MQ=60)
                  CATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTA                                                                            <  SRR4302532.4590206/94‑1 (MQ=60)
                  CATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTA                                                                            >  SRR4302532.5713312/1‑94 (MQ=60)
                  CATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTA                                                                            <  SRR4302532.2385614/94‑1 (MQ=60)
                   ATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAA                                                                           >  SRR4302532.1492862/1‑94 (MQ=60)
                     CGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACA                                                                         >  SRR4302532.5625777/1‑94 (MQ=60)
                     CGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACA                                                                         >  SRR4302532.4497703/1‑94 (MQ=60)
                      GGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAA                                                                        >  SRR4302532.2410334/1‑94 (MQ=60)
                      CGTTTCAATTTTCAGGAACATCCAGCGGGCAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAA                                                                        <  SRR4302532.1199838/94‑1 (MQ=60)
                       GTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAA                                                                       <  SRR4302532.3872840/94‑1 (MQ=60)
                       GTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAA                                                                       <  SRR4302532.5304604/94‑1 (MQ=60)
                        TTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACACAT                                                                      >  SRR4302532.3655662/1‑94 (MQ=60)
                        TTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAAT                                                                      >  SRR4302532.3147473/1‑94 (MQ=60)
                        TTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAAT                                                                      >  SRR4302532.1783958/1‑94 (MQ=60)
                             ATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGC                                                                 >  SRR4302532.4261611/1‑94 (MQ=60)
                             ATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGC                                                                 <  SRR4302532.2247336/94‑1 (MQ=60)
                              TTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCT                                                                <  SRR4302532.1600999/94‑1 (MQ=60)
                              TTTCCAGGAGCATCCAGCGGGCAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCT                                                                <  SRR4302532.122116/94‑1 (MQ=60)
                               TTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTG                                                               >  SRR4302532.1605902/1‑94 (MQ=60)
                                TTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGC                                                              >  SRR4302532.3214818/1‑94 (MQ=60)
                                 TCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACCAATGCTGCTGCC                                                             >  SRR4302532.141658/1‑94 (MQ=60)
                                  CAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCT                                                            <  SRR4302532.4977612/94‑1 (MQ=60)
                                   AGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTG                                                           <  SRR4302532.5578874/94‑1 (MQ=60)
                                   AGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTG                                                           >  SRR4302532.1328786/1‑94 (MQ=60)
                                   AGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTG                                                           <  SRR4302532.4262407/94‑1 (MQ=60)
                                   AGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTG                                                           >  SRR4302532.3418599/1‑94 (MQ=60)
                                    GGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGC                                                          >  SRR4302532.5705977/1‑94 (MQ=60)
                                    GGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGC                                                          <  SRR4302532.3984294/94‑1 (MQ=60)
                                     GAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCT                                                         <  SRR4302532.2616752/94‑1 (MQ=60)
                                      AACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTG                                                        >  SRR4302532.876337/1‑94 (MQ=60)
                                        CATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCG                                                      >  SRR4302532.2162222/1‑94 (MQ=60)
                                        CATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCG                                                      <  SRR4302532.3979572/94‑1 (MQ=60)
                                        CATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCG                                                      <  SRR4302532.6250224/94‑1 (MQ=60)
                                         ATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGC                                                     >  SRR4302532.517748/1‑94 (MQ=60)
                                         ATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGC                                                     >  SRR4302532.517747/1‑94 (MQ=60)
                                         ATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGC                                                     >  SRR4302532.4892346/1‑94 (MQ=60)
                                         ATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGC                                                     >  SRR4302532.517749/1‑94 (MQ=60)
                                         ATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGC                                                     >  SRR4302532.5443159/1‑94 (MQ=60)
                                          TCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCG                                                    >  SRR4302532.3411913/1‑94 (MQ=60)
                                          TCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCG                                                    >  SRR4302532.658367/1‑94 (MQ=60)
                                           CCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGG                                                   <  SRR4302532.5502982/94‑1 (MQ=60)
                                           CCAGCGGGGAGGGAAACGATACGTGGTAATTTTGGGGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGG                                                   >  SRR4302532.5337393/1‑94 (MQ=60)
                                            CAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGT                                                  <  SRR4302532.1958264/94‑1 (MQ=60)
                                            CAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGG                                                  >  SRR4302532.5318329/1‑94 (MQ=60)
                                             AGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTG                                                 >  SRR4302532.502980/1‑94 (MQ=60)
                                             AGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTG                                                 >  SRR4302532.5697741/1‑94 (MQ=60)
                                             AGCGGGGAGGTAAACGATACGTGGGAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTG                                                 >  SRR4302532.1636022/1‑94 (MQ=60)
                                                GGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGC                                              >  SRR4302532.2748155/1‑94 (MQ=60)
                                                 GGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCT                                             <  SRR4302532.1687932/94‑1 (MQ=60)
                                                 GGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCT                                             >  SRR4302532.1351555/1‑94 (MQ=60)
                                                   GAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCT                                           <  SRR4302532.4909778/94‑1 (MQ=60)
                                                    AGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTA                                          >  SRR4302532.1769575/1‑94 (MQ=60)
                                                    AGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACCCCTTAACAAATGATACTGCCTGCTGCGCGGTGGGCTCTA                                          >  SRR4302532.1658114/1‑94 (MQ=60)
                                                      GTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACG                                        <  SRR4302532.1265601/94‑1 (MQ=60)
                                                      GTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACG                                        >  SRR4302532.495283/1‑94 (MQ=60)
                                                      GTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACG                                        <  SRR4302532.3352168/94‑1 (MQ=60)
                                                      GTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACG                                        <  SRR4302532.5352346/94‑1 (MQ=60)
                                                       TAAACGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGG                                       >  SRR4302532.1359371/1‑94 (MQ=60)
                                                        AAAAGATACGTGGCAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGCTACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGA                                      >  SRR4302532.2522267/1‑94 (MQ=60)
                                                           CGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTG                                   <  SRR4302532.4047673/94‑1 (MQ=60)
                                                           CGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTG                                   >  SRR4302532.2000173/1‑94 (MQ=60)
                                                           CGATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTG                                   >  SRR4302532.2010567/1‑94 (MQ=60)
                                                             ATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCC                                 >  SRR4302532.2581019/1‑94 (MQ=60)
                                                             ATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCC                                 >  SRR4302532.1272357/1‑94 (MQ=60)
                                                             ATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCC                                 >  SRR4302532.2581018/1‑94 (MQ=60)
                                                             ATACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCC                                 >  SRR4302532.1272356/1‑94 (MQ=60)
                                                              TACGTGGCAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCC                                >  SRR4302532.655864/1‑94 (MQ=60)
                                                               ACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCG                               <  SRR4302532.3778987/94‑1 (MQ=60)
                                                               ACGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTACGCTCTACGGATTGCCCG                               <  SRR4302532.5675784/94‑1 (MQ=60)
                                                                CGTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGG                              >  SRR4302532.2737667/1‑94 (MQ=60)
                                                                CGGGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTACGCGGCGCGCTCTACGGATTGCCCGG                              >  SRR4302532.4273906/1‑94 (MQ=60)
                                                                 GTGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCggtgcgccgggcgcttttacggtttccccggc                             >  SRR4302532.2085300/1‑62 (MQ=60)
                                                                  ggaTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCG                            <  SRR4302532.2799626/91‑1 (MQ=60)
                                                                  TGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCG                            >  SRR4302532.6326256/1‑94 (MQ=60)
                                                                  TGGTAATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCG                            >  SRR4302532.1778228/1‑94 (MQ=60)
                                                                      AATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGTGCGAT                        >  SRR4302532.5747153/1‑94 (MQ=60)
                                                                      AATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGAT                        >  SRR4302532.804340/1‑94 (MQ=60)
                                                                      AATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGAT                        >  SRR4302532.5553095/1‑94 (MQ=60)
                                                                      AATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGAT                        >  SRR4302532.5537274/1‑94 (MQ=60)
                                                                       ATTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATA                       >  SRR4302532.1019377/1‑94 (MQ=60)
                                                                       ATTTTGGAGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTTACAAATGCTGCTGTCTGCTGTGCGGAGCGCCCTACGGATTGCCCtgctcgaac                       >  SRR4302532.5866453/1‑85 (MQ=55)
                                                                        TTTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCaatgaaaatcaccaaaattaccacgtatcgtttacc                      <  SRR4302532.6195075/94‑37 (MQ=60)
                                                                         TTTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGA                     >  SRR4302532.4814066/1‑94 (MQ=60)
                                                                          TTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAG                    <  SRR4302532.5253325/94‑1 (MQ=60)
                                                                          TTGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAG                    >  SRR4302532.2210924/1‑94 (MQ=60)
                                                                          TTGGGGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGAGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAG                    >  SRR4302532.3450513/1‑94 (MQ=60)
                                                                           TGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGA                   >  SRR4302532.4542271/1‑94 (MQ=60)
                                                                           TGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGA                   >  SRR4302532.4542270/1‑94 (MQ=60)
                                                                           TGGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCAGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGA                   <  SRR4302532.5685106/94‑1 (MQ=60)
                                                                           TGGTGATTTTCATTGCA‑CTGCCTATCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGA                   <  SRR4302532.3638183/94‑1 (MQ=60)
                                                                            GGTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCAGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGAT                  >  SRR4302532.3894358/1‑94 (MQ=60)
                                                                            GGGGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCCGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGCTAGAGAC                  >  SRR4302532.3894520/1‑94 (MQ=60)
                                                                             GTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATC                 >  SRR4302532.1187243/1‑94 (MQ=60)
                                                                             GTGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATC                 <  SRR4302532.3243413/94‑1 (MQ=60)
                                                                              TGATTTTCATTGCA‑CTGTCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCG                <  SRR4302532.2445016/94‑1 (MQ=60)
                                                                              TGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCG                >  SRR4302532.522527/1‑94 (MQ=60)
                                                                              TGATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCG                >  SRR4302532.1586175/1‑94 (MQ=60)
                                                                                ATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCT              >  SRR4302532.5547141/1‑94 (MQ=60)
                                                                                ATTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCT              <  SRR4302532.5250340/94‑1 (MQ=60)
                                                                                 TTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTG             <  SRR4302532.462259/94‑1 (MQ=60)
                                                                                 TTTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTG             <  SRR4302532.2657939/94‑1 (MQ=60)
                                                                                  TTTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGC            >  SRR4302532.4455330/1‑94 (MQ=60)
                                                                                   TTCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCC           >  SRR4302532.1613763/1‑94 (MQ=60)
                                                                                    TCATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCT          >  SRR4302532.5884470/1‑94 (MQ=60)
                                                                                     CATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTA         >  SRR4302532.4149279/1‑94 (MQ=60)
                                                                                     CATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTA         <  SRR4302532.13745/94‑1 (MQ=60)
                                                                                     CATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTA         <  SRR4302532.5623728/94‑1 (MQ=60)
                                                                                      ATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAA        >  SRR4302532.144559/1‑94 (MQ=60)
                                                                                      ATTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAA        >  SRR4302532.5575587/1‑94 (MQ=60)
                                                                                       TTGCA‑CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAG       <  SRR4302532.6154012/94‑1 (MQ=60)
                                                                                          gcCCTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCCCTGACTAAGCC     >  SRR4302532.1068680/3‑94 (MQ=60)
                                                                                           caCTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCC    >  SRR4302532.383738/3‑94 (MQ=60)
                                                                                           caCTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCC    >  SRR4302532.6354795/3‑94 (MQ=60)
                                                                                           caCTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCC    <  SRR4302532.4068960/92‑1 (MQ=60)
                                                                                           caCTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCC    >  SRR4302532.47023/3‑94 (MQ=60)
                                                                                           caCTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCC    >  SRR4302532.466022/3‑94 (MQ=60)
                                                                                           caCTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCC    >  SRR4302532.4252657/3‑94 (MQ=60)
                                                                                            ACTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCG   >  SRR4302532.2643509/1‑94 (MQ=60)
                                                                                            ACTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCG   <  SRR4302532.3644169/94‑1 (MQ=60)
                                                                                            ACTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCG   >  SRR4302532.5442138/1‑94 (MQ=60)
                                                                                             CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGC  >  SRR4302532.838680/1‑94 (MQ=60)
                                                                                             CTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGC  >  SRR4302532.4832274/1‑94 (MQ=60)
                                                                                             |                                                                                             
CCCAACCGACCACGCCTTCATCGGTTTCAATTTTCAGGAACATCCAGCGGGGAGGTAAACGATACGTGGTAATTTTGGTGATTTTCATTGCACCTGCCTCTCGATACGCCTTAACAAATGCTGCTGCCTGCTGCGCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGC  >  NC_000913/3870538‑3870724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑