Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,588,821 |
A→G |
I15T (ATA→ACA) |
yjiY ← |
putative carbon starvation protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,588,821 | 0 | A | G | 96.6%
| 676.5
/ 10.0
| 204 | I15T (ATA→ACA) | yjiY | putative carbon starvation protein |
| Reads supporting (aligned to +/- strand): ref base A (1/6); new base G (76/121); total (77/127) |
| Fisher's exact test for biased strand distribution p-value = 2.58e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.62e-01 |
Only 100 of 224 total aligned reads displayed.
ACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTATGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGCGTTTG > NC_000913/4588731‑4588913
|
ccGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGtgtg < 2:2957782/92‑1 (MQ=255)
aCGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGtgtg > 1:2697834/1‑93 (MQ=255)
cGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGgtgtgt < 1:5175944/93‑1 (MQ=255)
cGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGgtgtgt < 2:1100644/93‑1 (MQ=255)
cGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGgtgtgt < 2:5003470/93‑1 (MQ=255)
cGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGgtgtgt > 2:2558436/1‑93 (MQ=255)
gATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGtgtgtg > 2:2520146/1‑93 (MQ=255)
aTCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGc > 1:1836093/1‑93 (MQ=255)
aTCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGc > 2:2361578/1‑93 (MQ=255)
ccACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCtt > 1:82650/1‑93 (MQ=255)
cacaGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTg < 2:2822254/93‑1 (MQ=255)
caGGGCTCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGaa < 2:5047140/93‑1 (MQ=255)
gggCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAata > 1:1557689/1‑93 (MQ=255)
gggCGCTGATGTGCTCCCCCCGACATAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAata < 1:5098332/93‑1 (MQ=255)
gcgcTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATc < 1:1668149/93‑1 (MQ=255)
ggcggATGCGCGCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCt < 1:5992707/89‑1 (MQ=255)
gcTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCtt < 2:5964814/93‑1 (MQ=255)
tcaTGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATGCCGAGAATCACCCAGGGTGTGTGCTTGAATATCtttt < 1:766490/91‑1 (MQ=255)
gATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCttttt < 2:6006140/93‑1 (MQ=255)
gATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCttttt < 2:3300477/93‑1 (MQ=255)
aTGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTa < 1:32860/93‑1 (MQ=255)
aTGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTa < 1:702214/93‑1 (MQ=255)
aTGTGCGCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTa < 1:2808560/93‑1 (MQ=255)
tgtgCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAg > 1:2745742/1‑93 (MQ=255)
gtgCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGt < 2:1688684/93‑1 (MQ=255)
gtgCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGt < 1:201165/93‑1 (MQ=255)
tgCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTa > 2:2305942/1‑93 (MQ=255)
gctcccccccGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTa < 2:3468598/89‑1 (MQ=255)
gccTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTa < 1:1711531/91‑1 (MQ=255)
gCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTAt < 1:5279672/93‑1 (MQ=255)
ccccccGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCa < 1:957098/93‑1 (MQ=255)
cccccGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCAt < 2:4131299/93‑1 (MQ=255)
cccccGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCCAGAATCACCCAGGGTGTGTGCTTGCATATCTTTTTAGTATGCAt > 1:314502/1‑93 (MQ=255)
ccGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGt < 1:3305345/93‑1 (MQ=255)
cGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTa > 2:1308221/1‑93 (MQ=255)
cGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTa < 1:4044962/93‑1 (MQ=255)
aCGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTaaa > 1:1450208/1‑93 (MQ=255)
aCGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTaaa > 1:5468717/1‑93 (MQ=255)
gTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTATGTGCTTGAATATCTTTTTAGTATCCATAGTAAAAc < 2:4441286/93‑1 (MQ=255)
tAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAAcc < 1:2097251/93‑1 (MQ=255)
tAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAAcc < 2:2024993/93‑1 (MQ=255)
tAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAAcc > 1:4529232/1‑93 (MQ=255)
aaTGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCt < 2:1406286/93‑1 (MQ=255)
aTGCAACTCCCGCGAGGCAGAATGCACCGATTATTCCGAGAATCCCCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTg < 2:1498582/93‑1 (MQ=255)
aTGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTg > 2:3795108/1‑93 (MQ=255)
aTGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTg < 2:4038239/93‑1 (MQ=255)
aTGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTg < 2:5840021/93‑1 (MQ=255)
tGCAACTACCGCGAGACAGAATGCACCGATGATTCCGAGAATCACCCAGGGGGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTgg > 2:3678447/1‑93 (MQ=255)
gCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGc > 2:311180/1‑93 (MQ=255)
aaCTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCAt > 1:1209075/1‑93 (MQ=255)
cTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGt > 1:4284240/1‑93 (MQ=255)
cTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAAACTGGCATGt > 1:5447298/1‑93 (MQ=255)
tACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTa < 2:2802768/93‑1 (MQ=255)
ccGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTAtt > 1:2259183/1‑93 (MQ=255)
ccGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTAtt > 2:5895370/1‑93 (MQ=255)
aGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTa < 1:5648414/93‑1 (MQ=255)
aGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTa > 1:4247981/1‑93 (MQ=255)
gaGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATa < 1:2478223/92‑1 (MQ=255)
aGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAg < 1:699234/93‑1 (MQ=255)
aGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAg < 2:3375082/93‑1 (MQ=255)
gAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGt < 2:56291/93‑1 (MQ=255)
gAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGt > 1:3966038/1‑93 (MQ=255)
aaTGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGtt < 2:348304/93‑1 (MQ=255)
aaTGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGtt < 2:678213/93‑1 (MQ=255)
aaTGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGtt < 2:732778/93‑1 (MQ=255)
aaTGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGtt < 2:746967/93‑1 (MQ=255)
aTGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTg < 1:5820091/93‑1 (MQ=255)
aTGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTg < 2:1082961/93‑1 (MQ=255)
aTGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTg < 2:3134305/93‑1 (MQ=255)
tGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTgg > 2:5165329/1‑93 (MQ=255)
gCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGc > 2:1366195/1‑93 (MQ=255)
gCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGc < 2:4862902/93‑1 (MQ=255)
gCACCGATGATTCCGAGAAGTCCACAGGGTGTGTTCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGc < 2:2138104/93‑1 (MQ=255)
cACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGcc < 1:3209166/93‑1 (MQ=255)
acggatgatTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCg > 1:3862357/4‑93 (MQ=255)
ccGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGa > 1:5730448/1‑93 (MQ=255)
cGATGATTCCGAGAATCACCCAGGGTGTGTGCTTTAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTAGCCGaa > 1:3504780/1‑93 (MQ=255)
cGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGaa < 2:5571281/93‑1 (MQ=255)
cGATGATTCCGAGAATCACCCAGGGTGGGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGaa < 2:1721680/93‑1 (MQ=255)
atgatTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGc > 1:3070236/1‑93 (MQ=255)
atgatTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGc < 2:4610520/93‑1 (MQ=255)
atgatTCCAAGAATAACCCAGGGTGTTTGCTTAAATATCTTATTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGc < 1:24581/93‑1 (MQ=255)
tgatTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGcc > 2:4741484/1‑93 (MQ=255)
atTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGt > 1:3939168/1‑93 (MQ=255)
ttCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGtt > 2:526742/1‑93 (MQ=255)
atCCCAGAATCACCCAGGGTTTTTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAATCCGtt < 1:2242632/92‑1 (MQ=255)
cGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTa > 2:1262996/1‑93 (MQ=255)
gagaATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAg > 2:822808/1‑93 (MQ=255)
gagaATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAg < 1:738288/93‑1 (MQ=255)
gagaATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAg > 2:1482279/1‑93 (MQ=255)
aaTCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGtt < 2:5357138/93‑1 (MQ=255)
aaTCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGtt < 2:3889941/93‑1 (MQ=255)
tCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTttg < 2:323568/93‑1 (MQ=255)
cACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTttgc < 2:3523653/93‑1 (MQ=255)
ccAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTttgcgtt < 2:2698123/93‑1 (MQ=255)
ccAGGGTATGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTttgcgtt < 1:3890475/93‑1 (MQ=255)
cAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTttgcgttg > 2:510920/1‑93 (MQ=255)
cAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTttgcgttg > 1:2137455/1‑93 (MQ=255)
cAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTttgcgttg > 1:5036996/1‑93 (MQ=255)
gggTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTttgcgttgcg > 1:3532025/1‑93 (MQ=255)
|
ACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTATGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGCGTTTG > NC_000913/4588731‑4588913
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTATGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGCGTTTG > NC_000913/4588728‑4588913
|
cccacgctccacaggcctgTGATGTGCTCCCCCCGACGTAATGCAACTACCGCTAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTG < SRR4302532.855755/75‑1 (MQ=60)
CCCACGATCCACAGGGCCCTGATGGCCCCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTG < SRR4302532.4693880/94‑1 (MQ=60)
CCCGAACCACAGGGGGCTGATGTTCTCCCCCCGTCGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTG < SRR4302532.2131923/94‑1 (MQ=60)
CACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTG > SRR4302532.2788455/1‑94 (MQ=60)
atgatagactgggcaccgaccagccccccacgaagtaatgcaccggCCGCGAGGCAGAATGCACCGAGGATACCAAGAATCACCCAGGGTATGT < SRR4302532.6126917/48‑1 (MQ=60)
CGATCCACGGGGCCCGGCTGTGCCCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTG < SRR4302532.1548853/94‑1 (MQ=60)
CGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTG > SRR4302532.673522/1‑94 (MQ=60)
CGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTG < SRR4302532.4634486/94‑1 (MQ=60)
CGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTG < SRR4302532.5354196/94‑1 (MQ=60)
CGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTG < SRR4302532.3654098/94‑1 (MQ=60)
GATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGC < SRR4302532.1757847/94‑1 (MQ=60)
GATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGC > SRR4302532.725473/1‑94 (MQ=60)
GATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGC > SRR4302532.725474/1‑94 (MQ=60)
GATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGC > SRR4302532.1897124/1‑94 (MQ=60)
atccagagggcgtggttgtcgTCCCCCCGACGAAATGCAACTACCTCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGGGTGTGCT < SRR4302532.1256758/73‑1 (MQ=60)
TCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTGCGAGAATCACCCAGGGTGTGTGCTT > SRR4302532.72905/1‑94 (MQ=60)
TCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTT > SRR4302532.85572/1‑94 (MQ=60)
CACAGGGCGCTGATGGGTACCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACAGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGA < SRR4302532.837115/94‑1 (MQ=60)
CCAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAA < SRR4302532.4747604/94‑1 (MQ=60)
AGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATA > SRR4302532.1610361/1‑94 (MQ=60)
AGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATA > SRR4302532.2586247/1‑94 (MQ=60)
GGGCGCTGATGTGCTCCCCCCGACATAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATAT < SRR4302532.5273625/94‑1 (MQ=60)
GCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCT < SRR4302532.1724601/94‑1 (MQ=60)
GCGCTGATGTGCCCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCT < SRR4302532.189028/94‑1 (MQ=60)
ggcggatgcgcgCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTT < SRR4302532.6199731/82‑1 (MQ=60)
GCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTT < SRR4302532.96692/94‑1 (MQ=60)
tcacGTGCTCCCCCCGACGTAATGCAAGTCCCGCGAGGCAGAATGCATCGATAATTCCGAGAATCCCCCAGGGTGTGTGCTTGAATATCTTTTT < SRR4302532.2078279/90‑1 (MQ=60)
TCATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATGCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTT < SRR4302532.792940/94‑1 (MQ=60)
aatgtgctaaCCCCGACGTAATGCAAATAACGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTAAGCTTGAATATCTATTTA < SRR4302532.5867958/84‑1 (MQ=60)
GATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTA < SRR4302532.5636211/94‑1 (MQ=60)
ATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCATAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAG < SRR4302532.2853240/94‑1 (MQ=60)
ATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAG > SRR4302532.2837965/1‑94 (MQ=60)
ATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAG < SRR4302532.34098/94‑1 (MQ=60)
ATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAG < SRR4302532.726227/94‑1 (MQ=60)
ATGTGCGCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAG < SRR4302532.2902612/94‑1 (MQ=60)
ATGGGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAG < SRR4302532.1628755/94‑1 (MQ=60)
GTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTA < SRR4302532.208032/94‑1 (MQ=60)
gcCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTAT < SRR4302532.1769224/92‑1 (MQ=60)
TGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTAT < SRR4302532.841902/94‑1 (MQ=60)
GCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATC < SRR4302532.5461763/94‑1 (MQ=60)
CTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCC > SRR4302532.3245308/1‑94 (MQ=60)
CCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCAT < SRR4302532.989774/94‑1 (MQ=60)
CCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCCAGAATCACCCAGGGTGTGTGCTTGCATATCTTTTTAGTATGCAT > SRR4302532.325422/1‑94 (MQ=60)
CCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATA > SRR4302532.3250241/1‑94 (MQ=60)
CCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAG < SRR4302532.320616/94‑1 (MQ=60)
TCGACGTAATGTAACTACTGTGAGGCAGAATGTATCGATGATTTTGAGAATCATCCTGGGTGTGTGCTTTAATTTCTTTTTAGTATCCATAGTA > SRR4302532.5828369/1‑94 (MQ=21)
CCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTA < SRR4302532.3415405/94‑1 (MQ=60)
CGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAA < SRR4302532.4181150/94‑1 (MQ=60)
GACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAA > SRR4302532.5658314/1‑94 (MQ=60)
GACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAA > SRR4302532.1499103/1‑94 (MQ=60)
CGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAAC > SRR4302532.4412504/1‑94 (MQ=60)
CGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTCGAATATCTTTTTAGTATCCATAGTAAAAC > SRR4302532.2920202/1‑94 (MQ=60)
GTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACC < SRR4302532.4301524/94‑1 (MQ=60)
GTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACC < SRR4302532.8724/94‑1 (MQ=60)
GTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACC > SRR4302532.4683814/1‑94 (MQ=60)
TAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCT < SRR4302532.2167214/94‑1 (MQ=60)
AATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTG > SRR4302532.6110093/1‑94 (MQ=60)
ATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGG < SRR4302532.2333632/94‑1 (MQ=60)
CAACTCCCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAGCCTGGCAT < SRR4302532.402375/94‑1 (MQ=60)
CAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCAT > SRR4302532.1249530/1‑94 (MQ=60)
AACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATG < SRR4302532.4083435/94‑1 (MQ=60)
ACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGT < SRR4302532.5435937/94‑1 (MQ=60)
ACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGT > SRR4302532.2652681/1‑94 (MQ=60)
ACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGT > SRR4302532.4428646/1‑94 (MQ=60)
ACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAAACTGGCATGT > SRR4302532.5636099/1‑94 (MQ=60)
CTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTA < SRR4302532.5269430/94‑1 (MQ=60)
CTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTA < SRR4302532.2159610/94‑1 (MQ=60)
TACCGCGAGGCAGAATTCACCGAAGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTAT < SRR4302532.3649556/94‑1 (MQ=60)
TACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTAT < SRR4302532.596797/94‑1 (MQ=60)
ACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATT > SRR4302532.2334148/1‑94 (MQ=60)
ACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATT > SRR4302532.3408867/1‑94 (MQ=60)
cggcgagccttaaggcgCCGATGATTCCGAGAGTCACCCAGGGTATGTGCTTGAATAACTTTTTAGTCTCCAGAGTAAAgcttggaatgtaggg < SRR4302532.3205465/77‑16 (MQ=56)
CGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATT > SRR4302532.2058624/1‑94 (MQ=60)
GAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTA > SRR4302532.4390708/1‑94 (MQ=60)
AGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAA < SRR4302532.5844913/94‑1 (MQ=60)
AGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAA > SRR4302532.4066423/1‑94 (MQ=60)
GAGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAG < SRR4302532.2560785/94‑1 (MQ=60)
CAGAATGCACCGATGATTCCGAGTATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAG < SRR4302532.3614091/94‑1 (MQ=60)
AGAATGCACCGATGATTCCGAGAATCACCCCCAAGGGGGGTTGGTTGGTTGGCCTTTTGGAAAATTAATTCCTTTTTTTTTTAAGTATCCATAGTAAAA < SRR4302532.6326199/43‑1 (MQ=60)
AGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGT > SRR4302532.4099654/1‑94 (MQ=60)
AGAATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGT < SRR4302532.723160/94‑1 (MQ=60)
AATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACGTGGCATGTATTGATTAATAGTTG > SRR4302532.3614380/1‑94 (MQ=60)
ATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGG < SRR4302532.6022225/94‑1 (MQ=60)
ATGCACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGG < SRR4302532.1814279/94‑1 (MQ=60)
CACGGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCG > SRR4302532.3992729/1‑94 (MQ=60)
CACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCG > SRR4302532.4071861/1‑94 (MQ=60)
CACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCG < SRR4302532.3315728/94‑1 (MQ=60)
ACCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGA > SRR4302532.5930014/1‑94 (MQ=60)
CCGATGATTCCGAGAATCACCCAGGGTGTGTGCTTTAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTAGCCGAA > SRR4302532.3622172/1‑94 (MQ=60)
GATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGC > SRR4302532.3171686/1‑94 (MQ=60)
GATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGC > SRR4302532.255934/1‑94 (MQ=60)
ATGATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCC > SRR4302532.2176810/1‑94 (MQ=60)
ATGATTCCAAGAATAACCCAGGGTGTTTGCTTAAATATCTTATTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCC < SRR4302532.25564/94‑1 (MQ=60)
GATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGT > SRR4302532.4071901/1‑94 (MQ=60)
ATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTT > SRR4302532.763721/1‑94 (MQ=60)
ATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTT > SRR4302532.5328301/1‑94 (MQ=60)
ATTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTT > SRR4302532.4140693/1‑94 (MQ=60)
atcccAGAATCACCCAGGGTTTTTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAATCCGTTC < SRR4302532.2317055/89‑1 (MQ=60)
TTCCGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTC > SRR4302532.554243/1‑94 (MQ=60)
CGAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAG < SRR4302532.2291836/94‑1 (MQ=60)
GAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGG < SRR4302532.2240154/94‑1 (MQ=60)
GAGAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGG < SRR4302532.763441/94‑1 (MQ=60)
GAGAATCACCCAGGGTATGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGG < SRR4302532.4539784/94‑1 (MQ=60)
GAATCACCCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTT < SRR4302532.5831180/94‑1 (MQ=60)
CCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTG < SRR4302532.2422506/94‑1 (MQ=60)
CCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTG > SRR4302532.2208837/1‑94 (MQ=60)
CCAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTG > SRR4302532.5209754/1‑94 (MQ=60)
CCAGGGTATGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTG < SRR4302532.5886354/94‑1 (MQ=60)
CCAGGGTATGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTG < SRR4302532.4021735/94‑1 (MQ=60)
CAGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGC > SRR4302532.3355619/1‑94 (MQ=60)
AGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGCG < SRR4302532.2821084/94‑1 (MQ=60)
AGGGTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGCG > SRR4302532.3650222/1‑94 (MQ=60)
GTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGCGTTT > SRR4302532.1695401/1‑94 (MQ=60)
GTGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGCGTTT > SRR4302532.1180514/1‑94 (MQ=60)
TGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGCGTTTG < SRR4302532.6078985/94‑1 (MQ=60)
TGTGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTCTGCGTTGCGTTTG > SRR4302532.1325432/1‑94 (MQ=60)
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ACCACGATCCACAGGGCGCTGATGTGCTCCCCCCGACGTAATGCAACTACCGCGAGGCAGAATGCACCGATGATTCCGAGAATCACCCAGGGTATGTGCTTGAATATCTTTTTAGTATCCATAGTAAAACCTGGCATGTATTGATTAATAGTTGGCCGAAGCCGTTCTAGGTTTGCGTTGCGTTTG > NC_000913/4588728‑4588913
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
