Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAG  >  NC_000913/1824304‑1824489
                                                                                            |                                                                                             
AACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTA                                                                                              <  SRR4302532.3433419/94‑1 (MQ=60)
AACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCA                                                                                              <  SRR4302532.3504488/94‑1 (MQ=60)
  CGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGC                                                                                            <  SRR4302532.3217643/94‑1 (MQ=60)
  CGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGC                                                                                            <  SRR4302532.398275/94‑1 (MQ=60)
  CGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGC                                                                                            <  SRR4302532.398276/94‑1 (MQ=60)
  CGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGC                                                                                            >  SRR4302532.4639225/1‑94 (MQ=60)
  CGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGC                                                                                            >  SRR4302532.2122635/1‑94 (MQ=60)
   GCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCG                                                                                           <  SRR4302532.886220/94‑1 (MQ=60)
   GCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCG                                                                                           <  SRR4302532.6009709/94‑1 (MQ=60)
     TTTGCCAAGTTCCAGCGTACAGGTCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTACACGTACCACCAGGTTTCTGATGGAACACTAGCGTC                                                                                         >  SRR4302532.5827558/1‑94 (MQ=60)
      TTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCT                                                                                        <  SRR4302532.3369006/94‑1 (MQ=60)
         CCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCA                                                                                     <  SRR4302532.1430869/94‑1 (MQ=60)
          CAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAG                                                                                    <  SRR4302532.3896847/94‑1 (MQ=60)
            AGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCC                                                                                  <  SRR4302532.2614686/94‑1 (MQ=60)
               TCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCG                                                                               <  SRR4302532.6068899/94‑1 (MQ=60)
                 CAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCC                                                                             <  SRR4302532.3520519/94‑1 (MQ=60)
                    CGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCA                                                                          <  SRR4302532.2564073/94‑1 (MQ=60)
                     GTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCAC                                                                         >  SRR4302532.1769831/1‑94 (MQ=60)
                        CAGGCCAGCGGGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTCCCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCA                                                                      <  SRR4302532.4963163/94‑1 (MQ=60)
                        CAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCA                                                                      <  SRR4302532.3495725/94‑1 (MQ=60)
                         AGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAG                                                                     <  SRR4302532.3794702/94‑1 (MQ=60)
                         AGGCCAGCGCGCCAAAAGGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAG                                                                     <  SRR4302532.6101581/94‑1 (MQ=60)
                          GGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGC                                                                    >  SRR4302532.2297361/1‑94 (MQ=60)
                            CCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCA                                                                  >  SRR4302532.6261514/1‑94 (MQ=60)
                            CCAGCGCCCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCA                                                                  <  SRR4302532.2159613/94‑1 (MQ=60)
                                  CGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAG                                                            >  SRR4302532.4971168/1‑94 (MQ=60)
                                  CGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAG                                                            >  SRR4302532.5935588/1‑94 (MQ=60)
                                  CGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGAGGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAG                                                            <  SRR4302532.3317022/94‑1 (MQ=60)
                                   GCTAAAATGACTGGCGCTGAAGTGGGGAAACGTAGCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGACAGA                                                           >  SRR4302532.863781/1‑94 (MQ=60)
                                   GCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGA                                                           <  SRR4302532.901055/94‑1 (MQ=60)
                                   GCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGA                                                           >  SRR4302532.2184807/1‑94 (MQ=60)
                                     CAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAA                                                         >  SRR4302532.986658/1‑94 (MQ=60)
                                     CAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAA                                                         <  SRR4302532.13080/94‑1 (MQ=60)
                                     CAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAA                                                         >  SRR4302532.5704479/1‑94 (MQ=60)
                                     CAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAA                                                         >  SRR4302532.1501341/1‑94 (MQ=60)
                                     CAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAA                                                         >  SRR4302532.2696351/1‑94 (MQ=60)
                                      AAAATTGCTGGCGCTGAAGTGGGTAAACTTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCACCCCCGCCGCACCCAGCCACGTCAGAAAT                                                        <  SRR4302532.2692114/94‑1 (MQ=60)
                                      AAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAAT                                                        >  SRR4302532.2438853/1‑94 (MQ=60)
                                      AAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAAT                                                        >  SRR4302532.2081910/1‑94 (MQ=60)
                                      AAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAAT                                                        >  SRR4302532.3373525/1‑94 (MQ=60)
                                        AATGTCTGGCGTTGAAATGGGTAAACGTACCCCCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTT                                                      <  SRR4302532.1553600/94‑1 (MQ=60)
                                         ATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTC                                                     >  SRR4302532.1236256/1‑94 (MQ=60)
                                          TGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCT                                                    <  SRR4302532.931352/94‑1 (MQ=60)
                                           GTCTGGCGCTGAAATGGGTAAACGTCCCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTC                                                   <  SRR4302532.4293292/94‑1 (MQ=60)
                                           GTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTC                                                   >  SRR4302532.1618341/1‑94 (MQ=60)
                                           GTCTGGCGCTAAAATGGGTAAACGTCCCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTC                                                   <  SRR4302532.1409274/94‑1 (MQ=60)
                                            TCTGGCGCTGAAATGGGTAACCGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCG                                                  <  SRR4302532.115957/94‑1 (MQ=60)
                                            TCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCG                                                  <  SRR4302532.3314783/94‑1 (MQ=60)
                                            TCTGGCGCGAAAAGGGGTAAACGTCCCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCG                                                  <  SRR4302532.115958/94‑1 (MQ=60)
                                              ggggccgaaaagGGGTAAACGTCCCACCAGGTTCCTGATGAACCACTAGCCCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTC                                                <  SRR4302532.1377725/82‑1 (MQ=60)
                                               gacggTGAAATGGGTAAACGTCCCACCAGTTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCC                                               <  SRR4302532.5392959/89‑1 (MQ=60)
                                                 CGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCA                                             <  SRR4302532.3487521/94‑1 (MQ=60)
                                                  GCTGAAATGGGTAAACGTACCCCCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAG                                            <  SRR4302532.262707/94‑1 (MQ=60)
                                                   CTGAAATGGTTAAACGTCCCACCAGGTCCCTGATGGAACACTAGCCCCCCCACCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGG                                           <  SRR4302532.2731251/94‑1 (MQ=60)
                                                   CTGAAATGGGTAAACGTCCCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGG                                           <  SRR4302532.5702667/94‑1 (MQ=60)
                                                    TGAAAGGGGTAAACGTACCCCCAGGTTCCTGATGAAACACCAGCGCCTCCAGCCCCGCCGCCCCCAGCCACGGCAGAAATTTCTCGTCCCAGGG                                          <  SRR4302532.6138649/94‑1 (MQ=60)
                                                     GAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGA                                         >  SRR4302532.2550221/1‑94 (MQ=60)
                                                      AAATGGGTAAACGTCCCCCCAGGTTCCTGATGGAACACTAGCCCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAA                                        <  SRR4302532.2502224/94‑1 (MQ=60)
                                                      AAAGGGTTAACCGTACCACCAGGTTCCTGATGGACCACTAGCCCCCCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAA                                        <  SRR4302532.5635503/94‑1 (MQ=60)
                                                       AATGGGTAAACGTCCCACCGGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAAT                                       <  SRR4302532.5839484/94‑1 (MQ=60)
                                                       AATGGGTAAACGTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAAT                                       >  SRR4302532.4166830/1‑94 (MQ=60)
                                                        AGGGGTAAACGCACCACCAGGTTCCTGATGAAACACTGGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATG                                      <  SRR4302532.938947/94‑1 (MQ=60)
                                                         TGGGAAATCGTACCACCGGGTCCCTTGTGGAACCCCAGCGCCTCCACCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGT                                     <  SRR4302532.5135025/94‑1 (MQ=60)
                                                           GGTAAACGTCCCCCCAGGTCCCTGATGGACCACTAGCCCCCCCACCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCA                                   <  SRR4302532.4965741/94‑1 (MQ=60)
                                                               ACCGTACCACCAGTTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTT                               <  SRR4302532.700006/94‑1 (MQ=60)
                                                                cgctcccacatggttcctcacgaaaccCCAGCCCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTG                              <  SRR4302532.2601700/67‑1 (MQ=60)
                                                                ACGTCCCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTG                              <  SRR4302532.2601701/94‑1 (MQ=60)
                                                                 CGTCCCACCAGTTTCCTGATGGAACACTAGGCCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGC                             <  SRR4302532.2770043/94‑1 (MQ=60)
                                                                  GTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCG                            >  SRR4302532.4687774/1‑94 (MQ=60)
                                                                  GTACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCCCCGCACCCAGCCACGTCAGAACTTTCTCGTCCCAGGGCATGTCGCGTTGCG                            >  SRR4302532.2582261/1‑94 (MQ=60)
                                                                   TACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGG                           >  SRR4302532.805902/1‑94 (MQ=60)
                                                                    ACCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGT                          >  SRR4302532.412617/1‑94 (MQ=60)
                                                                     CCACCAGGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTA                         <  SRR4302532.3822794/94‑1 (MQ=60)
                                                                       CCCAGGTTCCTGATGGACCACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAAT                       <  SRR4302532.3180408/94‑1 (MQ=60)
                                                                         CAGTTCCCTGAGGGAACACCAGCCCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATAC                     <  SRR4302532.4641464/94‑1 (MQ=60)
                                                                         CAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATAC                     >  SRR4302532.3828418/1‑94 (MQ=60)
                                                                         CAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATAC                     >  SRR4302532.645105/1‑94 (MQ=60)
                                                                         CAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTACCAGGGGAGGTCGCGTTGCGGTAATAC                     >  SRR4302532.1236069/1‑94 (MQ=60)
                                                                          gggttccggggGGAACACAAGCGCCTCGAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACA                    <  SRR4302532.810102/83‑1 (MQ=60)
                                                                          AGGTTCCTGATGAACCCCCACCGCCCCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACA                    <  SRR4302532.341047/94‑1 (MQ=60)
                                                                          AGGTTCCGGATGGAACCCCAGCCCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACA                    <  SRR4302532.4862488/94‑1 (MQ=60)
                                                                           GGTTCCTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACAC                   >  SRR4302532.407254/1‑94 (MQ=60)
                                                                               CTTGATGGAACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGATATATCTCGTCCCAGGGAATGTCGCGGTGCGGTAATATACCGAA               >  SRR4302532.5665751/1‑94 (MQ=60)
                                                                                CTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAAC              >  SRR4302532.868667/1‑94 (MQ=60)
                                                                                  GATGAAACCCCAGCCCCCCCACCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTG            <  SRR4302532.2993714/94‑1 (MQ=60)
                                                                                  GATGAAACACAAGCGCCTCCACCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTG            <  SRR4302532.2399528/94‑1 (MQ=60)
                                                                                    ggaAACACCAGCGCCCCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCG          <  SRR4302532.3741061/91‑1 (MQ=60)
                                                                                     GGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGG         >  SRR4302532.1176000/1‑94 (MQ=60)
                                                                                       AACACTAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGAT       <  SRR4302532.1107426/94‑1 (MQ=60)
                                                                                       AACACCGCCGCCTCCACCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGAT       <  SRR4302532.3495931/94‑1 (MQ=60)
                                                                                         CACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGC     >  SRR4302532.5645519/1‑94 (MQ=60)
                                                                                           CCAGCCCCTCCACCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAA   <  SRR4302532.3184295/94‑1 (MQ=60)
                                                                                            CAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGCACTGCGGATGCAAG  >  SRR4302532.4518187/1‑94 (MQ=60)
                                                                                            |                                                                                             
AACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTCGTCCCAGGGAATGTCGCGTTGCGGTAATACACCGAACTGCGGATGCAAG  >  NC_000913/1824304‑1824489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑